Metagenome / Metatranscriptome Family F039556

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F039556
Family Type	Metagenome / Metatranscriptome
Number of Sequences	163
Average Sequence Length	62 residues
Representative Sequence	EPYVTFWPSEFLRFRLAYKHTDRSPQTREAFNLNGGSARLVDELLFQGTFILGAHPAHPF
Number of Associated Samples	135
Number of Associated Scaffolds	163

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.64 %
% of genes near scaffold ends (potentially truncated)	94.48 %
% of genes from short scaffolds (< 2000 bps)	87.12 %
Associated GOLD sequencing projects	126
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.319 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (27.607 % of family members)
Environment Ontology (ENVO)	Unclassified (38.650 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.601 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.64% β-sheet: 0.00% Coil/Unstructured: 61.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 163 Family Scaffolds
PF01297	ZnuA	92.02
PF00950	ABC-3	4.91
PF01569	PAP2	1.84
PF14588	YjgF_endoribonc	0.61

COG ID	Name	Functional Category	% Frequency in 163 Family Scaffolds
COG0609	ABC-type Fe3+-siderophore transport system, permease component	Inorganic ion transport and metabolism [P]	4.91
COG1108	ABC-type Mn2+/Zn2+ transport system, permease component	Inorganic ion transport and metabolism [P]	4.91
COG4606	ABC-type enterochelin transport system, permease component	Inorganic ion transport and metabolism [P]	4.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.32 %
Unclassified	root	N/A	3.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.32 %
Unclassified	root	N/A	3.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.32 %
Unclassified	root	N/A	3.68 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	31.90 %
Unclassified	root	N/A	3.68 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	31.90 %
Unclassified	root	N/A	3.68 %
Nitrospinae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae	0.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	31.90 %
Unclassified	root	N/A	3.68 %
Nitrospinia	class	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia	0.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	30.06 %
Unclassified	root	N/A	3.68 %
Nitrospinales	order	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales	0.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	28.83 %
Unclassified	root	N/A	3.68 %
Candidatus Rokubacteria bacterium 13_1_20CM_70_15	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_20CM_70_15	1.23 %
Nitrospinaceae	family	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae	0.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	28.83 %
Unclassified	root	N/A	3.68 %
Candidatus Rokubacteria bacterium 13_1_20CM_70_15	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_20CM_70_15	1.23 %
Nitrospina	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	0.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	28.83 %
Unclassified	root	N/A	3.68 %
Candidatus Rokubacteria bacterium 13_1_20CM_70_15	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_20CM_70_15	1.23 %
Nitrospina gracilis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina → Nitrospina gracilis	0.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c1201666	All Organisms → cellular organisms → Bacteria	1649	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10783036	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11155335	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300000550\|F24TB_10823397	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300000955\|JGI1027J12803_101355375	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1143	Open in IMG/M
3300000955\|JGI1027J12803_109266061	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300000956\|JGI10216J12902_101766609	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300002558\|JGI25385J37094_10014199	All Organisms → cellular organisms → Bacteria	2854	Open in IMG/M
3300002560\|JGI25383J37093_10022180	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2129	Open in IMG/M
3300002562\|JGI25382J37095_10028378	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2190	Open in IMG/M
3300002909\|JGI25388J43891_1066533	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	547	Open in IMG/M
3300002911\|JGI25390J43892_10137206	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300004479\|Ga0062595_101970717	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	563	Open in IMG/M
3300005166\|Ga0066674_10229047	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300005166\|Ga0066674_10451866	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	587	Open in IMG/M
3300005166\|Ga0066674_10455290	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	584	Open in IMG/M
3300005167\|Ga0066672_10930824	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005172\|Ga0066683_10067258	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina → Nitrospina gracilis	2139	Open in IMG/M
3300005172\|Ga0066683_10159974	All Organisms → cellular organisms → Bacteria	1385	Open in IMG/M
3300005172\|Ga0066683_10183333	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300005174\|Ga0066680_10268815	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_20CM_70_15	1085	Open in IMG/M
3300005178\|Ga0066688_10272443	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300005180\|Ga0066685_10362032	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1007	Open in IMG/M
3300005181\|Ga0066678_11032471	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300005446\|Ga0066686_10251282	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1194	Open in IMG/M
3300005447\|Ga0066689_10887356	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	552	Open in IMG/M
3300005450\|Ga0066682_10505210	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	766	Open in IMG/M
3300005468\|Ga0070707_100076660	All Organisms → cellular organisms → Bacteria	3225	Open in IMG/M
3300005471\|Ga0070698_100860698	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300005518\|Ga0070699_100244028	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300005552\|Ga0066701_10574154	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300005555\|Ga0066692_10786440	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	586	Open in IMG/M
3300005558\|Ga0066698_10822677	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	600	Open in IMG/M
3300005559\|Ga0066700_10940836	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300005568\|Ga0066703_10095950	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300005568\|Ga0066703_10752755	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	558	Open in IMG/M
3300005574\|Ga0066694_10140425	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_20CM_70_15	1143	Open in IMG/M
3300006034\|Ga0066656_11079843	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	516	Open in IMG/M
3300006046\|Ga0066652_100461516	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300006046\|Ga0066652_101422555	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300006049\|Ga0075417_10715248	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	515	Open in IMG/M
3300006794\|Ga0066658_10824425	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300006845\|Ga0075421_102057299	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	607	Open in IMG/M
3300006847\|Ga0075431_100493542	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300006871\|Ga0075434_101761451	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	627	Open in IMG/M
3300006880\|Ga0075429_100538970	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300007255\|Ga0099791_10096571	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300009012\|Ga0066710_100162450	All Organisms → cellular organisms → Bacteria	3126	Open in IMG/M
3300009012\|Ga0066710_101608268	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	995	Open in IMG/M
3300009094\|Ga0111539_13212102	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	527	Open in IMG/M
3300009156\|Ga0111538_12081458	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300009811\|Ga0105084_1114829	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300009818\|Ga0105072_1011121	All Organisms → cellular organisms → Bacteria	1589	Open in IMG/M
3300009822\|Ga0105066_1064708	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300010029\|Ga0105074_1116386	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300010047\|Ga0126382_10703368	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300010329\|Ga0134111_10035473	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1756	Open in IMG/M
3300010333\|Ga0134080_10249936	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300010335\|Ga0134063_10067292	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1589	Open in IMG/M
3300010335\|Ga0134063_10573066	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300010336\|Ga0134071_10229405	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300010358\|Ga0126370_10070416	All Organisms → cellular organisms → Bacteria	2309	Open in IMG/M
3300010359\|Ga0126376_11229852	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	765	Open in IMG/M
3300010359\|Ga0126376_11643028	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	676	Open in IMG/M
3300010359\|Ga0126376_12816967	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	536	Open in IMG/M
3300010360\|Ga0126372_12208812	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	599	Open in IMG/M
3300010362\|Ga0126377_10548566	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300010399\|Ga0134127_12869634	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	561	Open in IMG/M
3300010400\|Ga0134122_13162046	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300011271\|Ga0137393_10067100	All Organisms → cellular organisms → Bacteria	2851	Open in IMG/M
3300011271\|Ga0137393_11046239	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300012198\|Ga0137364_10324784	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300012198\|Ga0137364_11424285	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300012199\|Ga0137383_10180189	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300012200\|Ga0137382_10327326	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300012201\|Ga0137365_10735575	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300012203\|Ga0137399_11125130	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300012204\|Ga0137374_10695065	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300012208\|Ga0137376_10887788	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300012209\|Ga0137379_10711676	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300012351\|Ga0137386_10258145	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300012355\|Ga0137369_10246782	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300012357\|Ga0137384_10442392	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300012361\|Ga0137360_11439318	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300012918\|Ga0137396_11285858	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300012922\|Ga0137394_10416618	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300012927\|Ga0137416_11752519	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	567	Open in IMG/M
3300012930\|Ga0137407_10028022	All Organisms → cellular organisms → Bacteria	4346	Open in IMG/M
3300012930\|Ga0137407_12019714	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300012944\|Ga0137410_10892508	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300012944\|Ga0137410_11257536	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300012971\|Ga0126369_10867271	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300012971\|Ga0126369_12246302	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	632	Open in IMG/M
3300012975\|Ga0134110_10029518	All Organisms → cellular organisms → Bacteria	2139	Open in IMG/M
3300012976\|Ga0134076_10230943	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300012976\|Ga0134076_10256340	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300014154\|Ga0134075_10549020	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	521	Open in IMG/M
3300014883\|Ga0180086_1161868	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300015054\|Ga0137420_1382253	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300015357\|Ga0134072_10238396	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300015358\|Ga0134089_10361637	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	613	Open in IMG/M
3300015373\|Ga0132257_101592724	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300015374\|Ga0132255_104245124	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	608	Open in IMG/M
3300017659\|Ga0134083_10421558	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	586	Open in IMG/M
3300017659\|Ga0134083_10456610	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300017997\|Ga0184610_1004575	All Organisms → cellular organisms → Bacteria	3241	Open in IMG/M
3300018063\|Ga0184637_10041884	All Organisms → cellular organisms → Bacteria	2786	Open in IMG/M
3300018076\|Ga0184609_10090276	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300018079\|Ga0184627_10556644	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300018433\|Ga0066667_10164723	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300018468\|Ga0066662_10300709	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300019259\|Ga0184646_1030344	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	696	Open in IMG/M
3300020074\|Ga0194113_10513920	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300021073\|Ga0210378_10113492	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1053	Open in IMG/M
3300025325\|Ga0209341_11140648	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300025917\|Ga0207660_10486920	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300026285\|Ga0209438_1031012	All Organisms → cellular organisms → Bacteria	1774	Open in IMG/M
3300026314\|Ga0209268_1104669	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300026325\|Ga0209152_10191218	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300026333\|Ga0209158_1245023	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300026335\|Ga0209804_1073152	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300026360\|Ga0257173_1004475	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300026377\|Ga0257171_1102621	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	508	Open in IMG/M
3300026480\|Ga0257177_1088790	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300026524\|Ga0209690_1135657	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	937	Open in IMG/M
3300026524\|Ga0209690_1291896	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300026529\|Ga0209806_1280982	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	559	Open in IMG/M
3300026537\|Ga0209157_1039611	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2617	Open in IMG/M
3300026537\|Ga0209157_1048510	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2271	Open in IMG/M
3300026540\|Ga0209376_1275480	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300026547\|Ga0209156_10304058	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300026550\|Ga0209474_10085834	All Organisms → cellular organisms → Bacteria	2151	Open in IMG/M
3300027671\|Ga0209588_1249069	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300027873\|Ga0209814_10541130	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300027874\|Ga0209465_10475285	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300027880\|Ga0209481_10242653	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300027961\|Ga0209853_1047145	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300027961\|Ga0209853_1059825	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300028809\|Ga0247824_10100651	All Organisms → cellular organisms → Bacteria	1522	Open in IMG/M
3300031545\|Ga0318541_10843298	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	511	Open in IMG/M
3300031548\|Ga0307408_100769097	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300031668\|Ga0318542_10593435	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	578	Open in IMG/M
3300031720\|Ga0307469_10140946	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300031720\|Ga0307469_11797497	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300031740\|Ga0307468_100183835	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300031740\|Ga0307468_100787895	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300031748\|Ga0318492_10240184	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	934	Open in IMG/M
3300031831\|Ga0318564_10121382	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1163	Open in IMG/M
3300031845\|Ga0318511_10093316	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1272	Open in IMG/M
3300031859\|Ga0318527_10450010	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	549	Open in IMG/M
3300031954\|Ga0306926_11424374	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	803	Open in IMG/M
3300032002\|Ga0307416_100327189	All Organisms → cellular organisms → Bacteria → Proteobacteria	1538	Open in IMG/M
3300032180\|Ga0307471_100739500	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300032180\|Ga0307471_101193318	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	925	Open in IMG/M
3300032180\|Ga0307471_101869659	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300033289\|Ga0310914_10841801	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	816	Open in IMG/M
3300033811\|Ga0364924_024571	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.02%
Host-Associated	Host-Associated	7.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.12%
Plants	Host-Associated → Plants	7.98%
Aquatic	Environmental → Aquatic	4.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.75%
Sediment	Environmental → Aquatic → Sediment	3.07%
Freshwater	Environmental → Aquatic → Freshwater	1.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.23%
Floodplain	Environmental → Terrestrial → Floodplain	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.75%
Sand	Environmental → Terrestrial → Soil → Sand	4.29%
Loam	Environmental → Terrestrial → Soil → Loam	4.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.07%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.23%
Lake	Environmental → Aquatic → Freshwater → Lake	0.61%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.61%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	33.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.75%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.07%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.23%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.61%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.61%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.61%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.61%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	27.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.52%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.52%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.29%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.45%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.23%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.23%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.23%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.61%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.61%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.61%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.61%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.61%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033811	Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_12016663	2228664022	Soil	GGFRYDWSQYATNPGWEWAIEPYISFWPSEFLRFRLAYKYTDRSPQTRDAFNLNDSSARKVDELLFQASFILGAHPAHPF
ICChiseqgaiiFebDRAFT_107830362	3300000363	Soil	EFLRFRLAYKHTDRSQREAFSENGGSGRLVDELLFQASFILGAHPAHPF*
ICChiseqgaiiFebDRAFT_111553352	3300000363	Soil	EFLRFRLAYKHTERTTQTRDAFNLNGGSARNVDELLFQASFILGAHPAHPF*
F24TB_108233972	3300000550	Soil	SEFLRFRLAYKHTERTTQTRDAFNLNGGSARNVDELLFQASFILGAHPAHPF*
JGI1027J12803_1013553751	3300000955	Soil	YVGLEVQPFRRWAGGFRYDWSQYATNPGWEWAIEPYISFWPSEFLRFRLAYKYTDRSPQTRDAFNLNDSSARKVDELLFQASFILGAHPAHPF*
JGI1027J12803_1092660612	3300000955	Soil	PGWERAIEPYISFWPSEFLRFRLAYKNTERSPQTRDAFNLNGGSARNVDEVFIQGTFILGAHPAHPF*
JGI10216J12902_1017666091	3300000956	Soil	FWPSEFLRFRLAYKHTDRSPQTRDAFNLNDASARKVDELLFQASFILGAHPAHPF*
JGI25385J37094_100141991	3300002558	Grasslands Soil	RFRLAYKNTDRTHRETPDANDGSAKRVDEILFQGTFILGAHPAHPF*
JGI25383J37093_100221804	3300002560	Grasslands Soil	FWPSEFLRFRLAYKNTDRTHRETPDANDGSAKRVDEILFQGTFILGAHPAHPF*
JGI25382J37095_100283784	3300002562	Grasslands Soil	RSVEPYITFWPSEFLRFRLAYKNTDRTHRETPDANDGSAKRVDEILFQGTFILGAHPAHPF*
JGI25388J43891_10665332	3300002909	Grasslands Soil	TNPGWEWAIEPYVTFWPSEFLRFRLAYKHTDRSPQTRDAVNLNGSSARNVDELFFQASFILGAHPAHPF*
JGI25390J43892_101372062	3300002911	Grasslands Soil	RYDWSEFPANPGKERSVEPYITFWPSEFLRFRLAYKNTDRTHRETPGANDGSARRVDEILFQGTFILGAHPAHPF*
Ga0062595_1019707171	3300004479	Soil	EWAVEPYVTFWPSEFLRFRLAYKHTDRSQREAFSENGGSGRLVDELFFQASFILGAHPAHPF*
Ga0066674_102290471	3300005166	Soil	GKERSVEPYITFWPSEFLRFRLAYKNTDRTHRESLDANDGSAKKVDEVLFQGTFILGAHPAHPF*
Ga0066674_104518661	3300005166	Soil	ELLRGREKAIEPYISFFPSEFLRFRLGYKLTNRSQDDGFSANEASARKVDEIFFQATFILGAHPAHPF*
Ga0066674_104552902	3300005166	Soil	PGREWSVEPYLSFWPSEFLRFRVAYKYTDRSPQTRDAFNLNDASARKLDEILFQASFILGAHPAHPF*
Ga0066672_109308241	3300005167	Soil	FWPSEFLRFRLAYKNTDRTHRESLDANDGSAKKVDEVLFQGTFILGAHPAHPF*
Ga0066683_100672581	3300005172	Soil	FWPSEFLRFRVAYKYTDRSPQTRDAFNLNDASARKLDEILFQASFILGAHPAHPF*
Ga0066683_101599743	3300005172	Soil	PGYQWAVEPYVSFYPSEFLRFRLAYKHTDRTQRDVLDLNGNGGSGRIMDEWLFQATFILGAHPAHAF*
Ga0066683_101833333	3300005172	Soil	YITFWPSEFLRFRLAYKNTDRTHRESLDANGGSAKKVDEVLFQGTFILGAHPAHPF*
Ga0066680_102688151	3300005174	Soil	GKERSVEPYITFWPSEFLRFRLAYKNTDRTHRETPDLNDGSAKRVDEILFQGTFILGAHPAHPF*
Ga0066688_102724431	3300005178	Soil	WPSEFLRFRLAYKNTDRDHRDGFDANGGSARHVDEVLFQGSFILGAHPAHPF*
Ga0066685_103620322	3300005180	Soil	GREKAIEPYISFYPSEFLRFRLGYKLTNRSQDEGFSANEASARKVDEIFFQATFILGAHPAHPF*
Ga0066678_110324712	3300005181	Soil	TFWPSEFLRFRLAYKNTDRTHRESADANGGSAKKVDEVLFQGSFILGAHPAHPF*
Ga0066686_102512821	3300005446	Soil	YDWSEFPSNPGKERSVEPYITFWPSEFLRFRLAYKNTDRTHRETPGANDGSARRVDEVLFQGSFILGAHPAHPF*
Ga0066689_108873561	3300005447	Soil	FWPSEFLRFRAAYKRTDRTHRDGFDLNGGSARTVDEFLLQASFILGAHPAHPF*
Ga0066682_105052102	3300005450	Soil	YVEELLRGREKAIEPYISFYPSEFLRFRLGYKLTNRSQDDGFSANEASARKVDEIFFQATFILGAHPAHPF*
Ga0070707_1000766601	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VSFWPSEFLRFRLAYKHTDRSPQTRDAFNLNDASARKVEELLFQASFILGAHPAHPF*
Ga0070698_1008606981	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VSFWPSEFLRFRLAYKHTDRSPQTRDAFNLNDSSARKVDELLFQASFILGAHPAHPF*
Ga0070699_1002440283	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	DWSQYPENPGAERSFEPYISFWPSEFLRFRAAYKHTDRTHRDGFDLNGGSARSVDEFLFQASFILGAHPAHPF*
Ga0070696_1019028512	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	DYVEQLLRGRERAIEPYISFYPSEFLRFRLAYKLTDRTSDAGFSANEASARKVNELFFQASFTLGAHPAHPF*
Ga0066701_105741542	3300005552	Soil	LRFDWSQYPENPGAERSFEPYISFWPSEFLRFRAAYKRTDRTHRDGFDLNGGSARTVDEFLLQASFILGAHPAHPF*
Ga0066692_107577922	3300005555	Soil	TQPGFERAIEPYITFFPSEFLRFRLAYKNTERDRTQITPFNQNNTTARAVNEVFFQATFILGAHPAHPF*
Ga0066692_107864402	3300005555	Soil	PDRPGFEKAIEPYVSFFPSEFLRFRVAYKHTDRDRTQIEEFNLNGATARSVNEVFFQATFILGAHPAHPF*
Ga0066707_108641642	3300005556	Soil	YLYAELQPFRRWAFGARYDYVEELLRGREKAIEPYISFFPSEFLRFRLGYKLTNRSQDDGFSANEASARKVDEIFFQATFILGAHPAHPF*
Ga0066698_108226772	3300005558	Soil	YVSFWPSEFLRFRVAYKHTDRSPQTRDAFNLNDASARKIDEILFQASFILGAHPAHPF*
Ga0066700_109408361	3300005559	Soil	APGYQWAVEPYVTFYPSEFLRFRMAYKHTDRSHPFDVAGNGGSARLVDELLFQATFILGAHPAHAF*
Ga0066703_100959503	3300005568	Soil	PGKERSVEPYITFWPSEFLRFRLAYKNTDRTHRETPDLNDGSAKRVDEILFQGTFILGAHPAHPF*
Ga0066703_107527551	3300005568	Soil	VSFFPSEFLRFRLAYKHTDRDRTQIEGFNLNGATARTVNEVFFQASFILGAHPAHPF*
Ga0066694_101404251	3300005574	Soil	PGKERSVEPYITFWPSEFLRFRLAYKNTDRTHRESLDANDGSAKKVDEVLFQGTFILGAHPAHPF*
Ga0066656_110798432	3300006034	Soil	EVQPWRRWAGGFRYDWSQFLQTPGLEQAIEPYISFWPSEFLRFRLAYKHTARTTQTRDAFNLNGGSARTVDELFFQASFILGAHPAHPF*
Ga0066652_1004615161	3300006046	Soil	EFLRFRLGYKHTERTNRDQLDLNGNGGSGRLMDELFFQATFILGAHPAHAF*
Ga0066652_1014225551	3300006046	Soil	VEPYITFWPSEFLRFRLAYKNTDRDHRDGFDANGGSARHVDEVLFQGSFILGAHPAHPF*
Ga0075417_107152482	3300006049	Populus Rhizosphere	YVSFYPSEFLRFRLAYKHTDKSHRDVSDLLGNGGSSRLVDELLFQATFILGAHPAHPF*
Ga0066658_108244252	3300006794	Soil	ERSVEPYITFWPSEFLRFRLAYKNTDRTHRETPDLNDGSAKRVDEILFQGTFILGAHPAHPF*
Ga0075421_1020572991	3300006845	Populus Rhizosphere	EFLRFRLAYKHTERTTQTREAFNLNGGSARTVDELLFQASFILGAHPAHPF*
Ga0075431_1004935421	3300006847	Populus Rhizosphere	WPSEFLRFRLAYKHTARSERSPFNDSGGNARLVDELLFQASFILGAHPAHPF*
Ga0075434_1017614512	3300006871	Populus Rhizosphere	VNPGWEWAIEPYVSFWPSEFLRFRLAYKHTYRSPQTRDAFNLNGASARNVDELLFQASFILGAHPAHPF*
Ga0075429_1005389702	3300006880	Populus Rhizosphere	GRQWAVEPYVSFFPSEFLRFRLAYKHTEKSHRDVSDLLGNGGSSRIADELFLQATFILGAHPAHPF*
Ga0099791_100965711	3300007255	Vadose Zone Soil	TPGLEQAIEPYISFWPSEFLRFRLAYKHTARTTQTRDAFNLNGGSARTVDELFFQASFILGAHPAHPF*
Ga0099791_104120222	3300007255	Vadose Zone Soil	YAELQSFRRWAFGARYDYVEELLRGREKAIEPYISFYPSEFLRFRLGYKLTNRSQDDGFSANEASARKVDEIFFQATFILGAHPAHPF*
Ga0066710_1001624501	3300009012	Grasslands Soil	SEFLRFRAAYKRTDRTHRDGFDLNGGSARTVDEFLFQASFILGAHPAHPF
Ga0066710_1016082681	3300009012	Grasslands Soil	ISFWPSEFLRFRAAYKRTDRTHRDGFDLNGGSARTVDEFLLQASFILGAHPAHPF
Ga0111539_132121022	3300009094	Populus Rhizosphere	WPSEFLRFRLAYKHTERTTQTREAFNLNGGSARTVDELLFQASFILGAHPAHPF*
Ga0111538_120814582	3300009156	Populus Rhizosphere	FWPSEFLRFRLAYKHTARTTQTIDAFNLNGGSARTVDELFFQASFILGAHPAHPF*
Ga0105084_11148292	3300009811	Groundwater Sand	RSIEPYISFWPSEFLRFRVAYKNTERTHRDGFDLNGGSARKVDEFLFQASFILGAHPAHPF*
Ga0105072_10111211	3300009818	Groundwater Sand	EVQPWRRWAGGLRFDWSQYPQNPGYEYSIEPYVSFWPSEFLRFRLGYKRTDRSTQTREAFNLNDASARRVDEILFQATFILGAHPAHPF*
Ga0105066_10647082	3300009822	Groundwater Sand	SEFLRFRLAYKHTDRSPQTRDVFNANDSSARKVDEILFQATFILGAHPAHPF*
Ga0105074_11163862	3300010029	Groundwater Sand	SVEPYVSFWPSEFLRFRLAYKHTDRSPQTRDVFNANDSSARKVDEILFQATFILGAHPAHPF*
Ga0126310_110876942	3300010044	Serpentine Soil	WAGGVRYDSTELLVRGREWSIEPYVSFWPSEFLRFRLGYKLTERSQDVGFSTEQASARHVDELFFQATFILGAHPAHPF*
Ga0126382_107033682	3300010047	Tropical Forest Soil	FLRFRLAYKHTDRSPQTREAFNLNGGSARLVDEIFFQGSFILGAHPAHPF*
Ga0134111_100354731	3300010329	Grasslands Soil	AGVRYDWSEFPANPGKERSVEPYITFWPSEFLRFRLAYKNTDRTHRESLDANDGSAKKVDEVLFQGTFILGAHPAHPF*
Ga0134080_102499361	3300010333	Grasslands Soil	GLEQAIEPYISFWPSEFLRFRLAYKHTARTTQTRDAFNLNGGSARTVDELFFQASFILGAHPAHPF*
Ga0134063_100672923	3300010335	Grasslands Soil	WAVEPYITFWPSEFLRFRLAYKRTERDRSVDFAGNGGSARIADEVLFQGTFILGAHPAHPF*
Ga0134063_105730662	3300010335	Grasslands Soil	WAIEPYVSFWPSEFLRFRLAYKHTDRSPQTRDAFNLNDSSARKVDELLFQASFILGAHPAHPF*
Ga0134071_102294052	3300010336	Grasslands Soil	AERSFEPYISFWPSEFLRFRAAYKRTDRTHRDGFDLNGGSARTVDEFLLQASFILGAHPAHPF*
Ga0126370_100704164	3300010358	Tropical Forest Soil	EPYVTFWPSEFLRFRLAYKHTDRSPQTREAFNLNGGSARLVDELLFQGTFILGAHPAHPF
Ga0126376_112298522	3300010359	Tropical Forest Soil	SFYPSEFLRFRLAYKHTDRTTRDLFNNNGGSGRLMDEWFFQATFVLGAHPAHAF*
Ga0126376_116430282	3300010359	Tropical Forest Soil	LEVQPFRRWAGGFRYDWSQYPTTPGWEWAIEPYVTFWPSEFLRFRLAYKYTGRSPQTRDAFNLNDSSARKVDEILFQASFILGAHPAHPF*
Ga0126376_128169672	3300010359	Tropical Forest Soil	MPSEFLRFRLAYKHTDRSNREGFDLNGGSGRIMDEWFLQATFVLGAHPAHPF*
Ga0126372_122088121	3300010360	Tropical Forest Soil	YITFWPSEFLRFRLAYKNTERDRTQITPFNQNNATARAVNEVFFQASFILGAHPAHPF*
Ga0126377_105485661	3300010362	Tropical Forest Soil	VTFWPSEFLRFRLAYKHTDRSPQTREAFNLNGGSARLVDEIFFQGSFILGAHPAHPF*
Ga0134127_128696342	3300010399	Terrestrial Soil	WPSEFLRFRLAYKHTDRSQATDPAGNGGSARRVDEILLQGTFILGAHPAHPF*
Ga0134122_131620461	3300010400	Terrestrial Soil	FWPSEFLRFRLAYKNTERSPQTRDAFNLNGGSARNVDEVLFQGTFVMGAHPAHPF*
Ga0137393_100671001	3300011271	Vadose Zone Soil	YISFWPSEFLRFRAAYKRTDRTHRDGFDLNGGSARTVDEFLFQASFILGAHPAHPF*
Ga0137393_110462392	3300011271	Vadose Zone Soil	RFRLAYKNTYRDHRDGFDLNGGTARKVDEVLFQGTFILGAHPAHPF*
Ga0137364_103247842	3300012198	Vadose Zone Soil	FLRFRLAYKHTERTHRDLLDLNGAGGSGRIMDELLFQATFILGAHPAHSF*
Ga0137364_114242851	3300012198	Vadose Zone Soil	WPSEFLRFRLAYKNTERTHRDGFDANGGSARQVDEVLFQGTFILGAHPAHPF*
Ga0137383_101801891	3300012199	Vadose Zone Soil	FEWAIEPYVTFFPSEFLRFRLAYKNTERDRTQISPFNQNNATARAVNEVFFQATFILGAHPAHPF*
Ga0137382_103273262	3300012200	Vadose Zone Soil	PSEFLRFRLAYKNTDRDHRDGFDANGGSARHVDEVLFQGSFILGAHPAHPF*
Ga0137365_107355752	3300012201	Vadose Zone Soil	LRFRLAYKNTDRTHRESADANGGSAKKVDEVLFQGTFILGAHPAHPF*
Ga0137399_111251302	3300012203	Vadose Zone Soil	YISFWPSEFLRFRLAYKHTARTTQTRDAFNLNGGSARTVDEILFQASFILGAHPAHPF*
Ga0137374_106950652	3300012204	Vadose Zone Soil	YPENPGAERSFEPYISFWPSEFLRFRAAYKHTDRTHRDGFDLNGGSARSVDEFLFQASFILGAHPAHPF*
Ga0137376_108877882	3300012208	Vadose Zone Soil	SFWPSEFLRFRLAYKHTDRSPQTRDAFNLNDSSARKVDELLFQASFILGAHPAHPF*
Ga0137379_107116761	3300012209	Vadose Zone Soil	QYPSNPGWEWAIEPYVTFWPSEFLRFRLAYKHTDRSPQTRDAFNLNGGSARNVDEIFFQGTFVMGAHPAHPF*
Ga0137386_102581451	3300012351	Vadose Zone Soil	ERSVEPYITFWPSEFLRFRLAYKNTDRTHRESLDANDGSAKKVGEVLFQGTFILGAHPAHPF*
Ga0137369_102467823	3300012355	Vadose Zone Soil	WRRWAGGLRFDWSQYPENPGAERSIEPYISFWPSEFLRFRAAYKHTGRTHRDGFDLNGGSARSVDEFLFQASFILGAHPAHPF*
Ga0137384_104423921	3300012357	Vadose Zone Soil	PVNPGKERSVEPYITFWPSEFLRFRLAYKNTDRTHRESADANGGSAKKVDEVLFQGTFILGAHPAHPF*
Ga0137360_114393182	3300012361	Vadose Zone Soil	PSEFLRFRVAYKYTDRSPQSRDAFNLNDASARKVDEILFQASFILGAHPAHPF*
Ga0137396_112858581	3300012918	Vadose Zone Soil	ISFWPSEFIRFRLAYKHTARTTQTTDAFNLNGGSARTVDELFFQASFILGAHPAHPF*
Ga0137394_104166182	3300012922	Vadose Zone Soil	VEPYVTFYPSEFLRFRLAYKHTDRSHPFDVAGNGGSARLVDELLFQATFILGAHPAHAF*
Ga0137416_117525191	3300012927	Vadose Zone Soil	ERSFEPYISFWPSEFLRFRAAYKRTDRTHRDGFDLNGGSARTVDEFLLQASFILGAHPAHPF*
Ga0137407_100280227	3300012930	Vadose Zone Soil	FWPSEFLRFRLAWKHTDRTSRDGWNNNGGSARQVDEVLFQGSFILGAHPAHPF*
Ga0137407_120197142	3300012930	Vadose Zone Soil	EPYITFWPSEFLRFRLAYKNTDRTHRESADANDGSAKKVDEVLFQGSFILGAHPAHPF*
Ga0137410_108925082	3300012944	Vadose Zone Soil	QWAVEPYVSFYPSEFLRFRVGYKHTDRTHRDQLDLNGNGGSGRLMDELFFQATFILGAHPAHAF*
Ga0137410_112575362	3300012944	Vadose Zone Soil	FWPSEFLRFRAAYKRTDRTHRNGFDLNSGSARTMDEFLLQASFILGAHPAHPF*
Ga0126369_108672711	3300012971	Tropical Forest Soil	GWEWAIEPYVTFWPSEFLRFRLAYKHTDRSPQTREAFNLNGGSARLVDEVLFQGTFIMGAHPAHPF*
Ga0126369_122463022	3300012971	Tropical Forest Soil	PGWEWAIEPYVTFWPSEFLRFRLAYKHTDRSPQTRDAFNLNGGSARIVDEILFQGTFVMGAHPAHPF*
Ga0134110_100295181	3300012975	Grasslands Soil	ITFWPSEFLRFRLAYKNTDRTHRESADANDGSAKKVDEVLFQGSFILGAHPAHPF*
Ga0134076_102309432	3300012976	Grasslands Soil	YLVLALEFLRFRLAYKHTARTTQTRDAFNLNGGSARTVDELFFQASFILGAHPAHPF*
Ga0134076_102563402	3300012976	Grasslands Soil	YLTFWPSEFLRFRLAYKNTDRTHRETPGANDGSARRVDEVLFQGTFILGAHPAHPF*
Ga0134075_105490201	3300014154	Grasslands Soil	GGEVQPWRRWAGGFRYDWSQFLQTPGLEQAIEPYISFWPSEFLRFRLAYKHTARTTQTRDAFNLNGGSARTVDELLFQASFILGAHPAHPF*
Ga0180086_11618681	3300014883	Soil	LAFMPSEFLRFRLAYKHTNRSDNHPLAVTLGRRSFDEVLLQASFILGAHPAHPF*
Ga0137420_13822532	3300015054	Vadose Zone Soil	YVTFYPSEFLRFRMAYKHTDRSHPFDVAGNGGSARLVDELLFQATFILGAHPAHAF*
Ga0134072_102383961	3300015357	Grasslands Soil	NPGKERSVEPYITFWPSEFLRFRLAYKNTDRTHRETPDANDGSAKRVDEILFQGTFILGAHPAHPF*
Ga0134089_103616371	3300015358	Grasslands Soil	PSEFLRFRVAYKYTDRSPQTRDAFNLNDASARKLDEILFQASFILGAHPAHPF*
Ga0132257_1015927241	3300015373	Arabidopsis Rhizosphere	EFLRFRLAYKHTERTHHDLLDPNVNGGSARIVDELFFQATFILGAHPAHAF*
Ga0132255_1042451242	3300015374	Arabidopsis Rhizosphere	IEPYVTFWPSEFLRFRLAYKHTDRSPQTRDAFNLNGGSARIVDEILIQGTFVLGAHPAHPF*
Ga0134083_104215582	3300017659	Grasslands Soil	VTFWPSEFLRFRLAYKHTDQRNSLFNANGATANSVNEVFFQATFILGAHPAHPF
Ga0134083_104566101	3300017659	Grasslands Soil	ERSFEPYISFWQSEFLRFRAAYKHTDRTHRDGFDLNGGSARSVDEFLFQASFILGAHPAHPF
Ga0184610_10045751	3300017997	Groundwater Sediment	MRGREWAAGPFISYQPSEFLRFRLGYKHTQRTADRADFSENESSARKVDEILFQATFILGAHPAHPF
Ga0184637_100418844	3300018063	Groundwater Sediment	YSIEPYVSFWPSEFLRFRLGYKRTDRSTQTREAFNLNDASARRVDEILFQATFILGAHPAHPF
Ga0184609_100902761	3300018076	Groundwater Sediment	LRFDWSQYPENPGAERSIEPYISFWPSEFLRFRAAYKRTDRTHRDGFDLNGGSARTVDEFLFQASFILGAHPAHPF
Ga0184627_105566442	3300018079	Groundwater Sediment	YVSFWPSEFLRFRLGYKRTDRSTQTREAFNLNDASARRVDEILFQATFILGAHPAHPF
Ga0066667_101647233	3300018433	Grasslands Soil	YITFWPSEFLRFRLAYKNTDRTHRESLDANGGSAKKVDEVLFQGTFILGAHPAHPF
Ga0066662_103007093	3300018468	Grasslands Soil	YITFWPSEFLRFRLAYKNTDRTHRESLDANDGSAKKVDEVLFQGTFILGAHPAHPF
Ga0184646_10303441	3300019259	Groundwater Sediment	PQNPGYEYSIEPYVSFWPSEFLRFRLGYKRTDRSTQTREAFNLNDASARRVDEILFQATFILGAHPAHPF
Ga0194113_105139201	3300020074	Freshwater Lake	YDYTELLDRGRERAFEPYVTFWPSEFLRFRLAYRLTERTQDAGFSANSASARHVDELLFQATFILGAHPAHQF
Ga0210378_101134921	3300021073	Groundwater Sediment	FLRFRLAYKHTDRSQREAFSENGGSGRLVDELLFQASFILGAHPAHPF
Ga0196962_102790792	3300024430	Soil	RYDSVELLERGREWSVEPYVTFWPSEFLRFRLGYKLTERSQDTGFSTDQASARHVNELFFQATFVLGAHPAHPF
Ga0209341_111406482	3300025325	Soil	HEWAVQPYLAFMPSEFLRFRLAYKHSERDKRDCCSANDATARIVDELLFQASFILGAHPAHPF
Ga0207660_104869202	3300025917	Corn Rhizosphere	GPFISFSPSEFLRFRLGYKHTQRTADRASFSENESSARKVDEILFQATFILGAHPAHPF
Ga0209438_10310121	3300026285	Grasslands Soil	GFRYDWSQFLQTPGLEQAIEPYISFWPSEFLRFRLAYKHTARTTQTRDAFNLNGGSARTVDELFFQASFILGAHPAHPF
Ga0209268_11046692	3300026314	Soil	GVRYDWSEFPATPGKERSVEPYITFWPSEFLRFRLAYKNTDRTHRESLDANDGSAKKVDEVLFQGTFILGAHPAHPF
Ga0209152_101912182	3300026325	Soil	FRLAYKNTDRTHRESADANDGSAKKVDEVLFQGSFILGAHPAHPF
Ga0209158_12450232	3300026333	Soil	VEPYVTFYPSEFLRFRMAYKHTDRSHPFDVAGNGGSARLVDELLFQATFILGAHPAHAF
Ga0209804_10731521	3300026335	Soil	FRLAYKNTDRDHRDGFDANGGSARHVDEVLFQGSFILGAHPAHPF
Ga0257173_10044751	3300026360	Soil	DWSQYPENPGAERSFEPYISFWPSEFLRFRAAYKRTDRTHRDGFDLNGGSARTVDEFLFQASFILGAHPAHPF
Ga0257171_11026211	3300026377	Soil	FLRFRVAYKHTDRSPQTRDAFNLNDSSARKVDELLFQASFILGAHPAHPF
Ga0257177_10887901	3300026480	Soil	NPGAERSFEPYISFWPSEFLRFRAAYKRTDRTHRDGFDLNGGSARTVDEFLLQASFILGAHPAHPF
Ga0209690_11356571	3300026524	Soil	PYVSFWPSEFLRFRLAYKHTDRSPQTRDAFNLNDSSARKVDELLFQASFILGAHPAHPF
Ga0209690_12918961	3300026524	Soil	GKERSVEPYITFWPSEFLRFRLAYKNTDRTHRESPDANDGSAKKVDEVLFQGTFILGAHPAHPF
Ga0209806_12809821	3300026529	Soil	VSFFPSEFLRFRLAYKHTDRDRTQIEGFNLNGATARTVNEVFFQASFILGAHPAHPF
Ga0209157_10396111	3300026537	Soil	EPYITFWPSEFLRFRLAYKNTDRTHRESLDANDGSAKKVDEVLFQGTFILGAHPAHPF
Ga0209157_10485101	3300026537	Soil	GKERSVEPYITFWPSEFLRFRLAYKNTDRTHRESLDANGGSAKKVDEVLFQGTFILGAHPAHPF
Ga0209376_12754802	3300026540	Soil	EFPATPGKERSVEPYITFWPSEFLRFRLAYKNTDRTHRETPDLNDGSAKRVDEILFQGTFILGAHPAHPF
Ga0209156_103040582	3300026547	Soil	RSVEPYITFWPSEFLRFRLAYKNTDRTHRESADANDGSAKKVDEVLFQGSFILGAHPAHP
Ga0209474_100858342	3300026550	Soil	VSFYPSEFLRFRVGYKHTDRTQRDLLDLNGNGGSARLMDELFFQATFILGAHPAHAF
Ga0209588_12490692	3300027671	Vadose Zone Soil	FYPSEFLRFRLAYKHTDRSHPFDVAGNGGSARLVDELLFQATFILGAHPAHAF
Ga0209814_105411302	3300027873	Populus Rhizosphere	YVSFYPSEFLRFRLAYKHTDKSHRDVSDLLGNGGSSRLVDELLFQATFILGAHPAHPF
Ga0209465_104752852	3300027874	Tropical Forest Soil	NPGWEWAIEPYVTFWPSEFLRFRLAYKHTDRSPQTREAFNLNGGSARLVDELLFQGTFILGAHPAHPF
Ga0209481_102426532	3300027880	Populus Rhizosphere	EPYVSFFPSEFLRFRLAYKHTDRQQRFDAAGNGGSARLVDELLFQATFILGAHPAHPF
Ga0209853_10471453	3300027961	Groundwater Sand	FWPSEFLRFRLGYKRTDRSTQTREAFNLNDASARRVDEILFQATFILGAHPAHPF
Ga0209853_10598251	3300027961	Groundwater Sand	VEPYVSFWPSEFLRFRLAYKHTDRSPQTRDVFNANDSSARKVDEILFQATFILGAHPAHP
Ga0247824_101006513	3300028809	Soil	YPDAPGWQWAVEPYVSFLPSEFLRFRLAYKHTDRQQRVDLAGNGGSARLVDELLFQATFILGAHPAHSF
Ga0318541_108432981	3300031545	Soil	TTPGWEWAIEPYVSFWPSEFLRFRLAYKYTDRSPQTRDAFNLNDSSARKVDEILFQASFILGAHPAHPF
Ga0307408_1007690971	3300031548	Rhizosphere	VEAGREWAVEPYVTFWPSEFLRFRLAYKHTDRSERSPFNDTGGSARLVDELLFQASFILGAHPAHPF
Ga0318542_105934351	3300031668	Soil	YVTFWPSEFLRFRLAYKHTDRSPQTRDAFNLNGGSARIVDEILFQGTFIMGAHPAHPF
Ga0307469_101409463	3300031720	Hardwood Forest Soil	PSEFLRFRLAYKYTDRSPQTRDAFNLNDSSARKVDEILFQASFILGAHPAHPF
Ga0307469_117974972	3300031720	Hardwood Forest Soil	EFLRFRFAYKHTARTTQTIDAFNLNGGSARTVDELFLQASFILGAHPAHPF
Ga0307468_1001838353	3300031740	Hardwood Forest Soil	QYPVNPGWVWAIEPYVTFGPSEFLRFRLAYKYTDRSPQTRDAFNLNDSSARKVDEILFQATFILGAHPAHPF
Ga0307468_1007878951	3300031740	Hardwood Forest Soil	SQFLQGPGLEQAIEPYISFWPSEFLRFRLAYKHTARTTQTIDAFNLNGGSARTVDELFFQASFILGAHPAHPF
Ga0318492_102401841	3300031748	Soil	FWPSEFLRFRLAYKHTDRSPQTRDAFNLNGGSARIVDEIFFQGTFIMGAHPAHPF
Ga0318564_101213821	3300031831	Soil	GWEWAIEPYVSFWPSEFLRFRLAYKYTDRSPQTRDAFNLNDSSARKVDEILFQASFILGAHPAHPF
Ga0318511_100933161	3300031845	Soil	PGWEWAIEPYVSFWPSEFLRFRLAYKYTDRSPQTRDAFNLNDSSARKVDEILFQASFILGAHPAHPF
Ga0318527_104500101	3300031859	Soil	QYPSNPGWEWAIEPYVTFWPSEFLRFRLAYKHTDRSPQTRDAFNLNGGSARIVDEIFFQGTFIMGAHPAHPF
Ga0306926_114243741	3300031954	Soil	PSNPGWEWAIEPYVTFWPSEFLRFRLAYKHTDRSPQTRDAFNLNGGSARIVDEILFQGTFVMGAHPAHPF
Ga0307416_1003271892	3300032002	Rhizosphere	VESAIAGREHAISPYVTFWPSEFLRFRLGYKHTDRTQDDGFSIRHSARRADELFFQATFVLGAHPAHPF
Ga0307471_1007395002	3300032180	Hardwood Forest Soil	FLQTPGLEQAIEPYISFWPSEFLRFRLAYKHTARTTQTTDAFNLNGGSARTVDELFFQASFILGAHPAHPF
Ga0307471_1011933181	3300032180	Hardwood Forest Soil	GWEWAIEPYVTFWPSEFQRFRLAYKHTDRSPQTRDAFNLNGGSARIVDEILIQGTFVLGAHPAHPF
Ga0307471_1018696591	3300032180	Hardwood Forest Soil	GLEQAIEPYISFWPSEFLRFRLAYKHTARTTQTTDAFNLNGGSARTVDELFFQASFILGAHPAHPF
Ga0310914_108418012	3300033289	Soil	TFWPSEFLRFRLAYKHTDRSPQTRDAFNLNGGSARIVDEIFFQGTFIMGAHPAHPF
Ga0364924_024571_990_1205	3300033811	Sediment	YPQNPGYEYAIEPYVSFWPSEFLRFRLGYKRTDRSTQTREAFNLNDASARRVDEILFQATFILGAHPAHPF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F039556

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences