Metagenome / Metatranscriptome Family F039562

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F039562
Family Type	Metagenome / Metatranscriptome
Number of Sequences	163
Average Sequence Length	54 residues
Representative Sequence	MLQTDKNPELDERVWQAWIKKNEAQDKVRFARRVRVIGLVTAFLALSALLWRLT
Number of Associated Samples	124
Number of Associated Scaffolds	163

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	38.65 %
% of genes near scaffold ends (potentially truncated)	36.81 %
% of genes from short scaffolds (< 2000 bps)	82.21 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.687 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (32.515 % of family members)
Environment Ontology (ENVO)	Unclassified (66.871 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.098 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.10% β-sheet: 0.00% Coil/Unstructured: 43.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 163 Family Scaffolds
PF00076	RRM_1	9.20
PF04073	tRNA_edit	5.52
PF13167	GTP-bdg_N	4.91
PF12367	PFO_beta_C	4.29
PF16360	GTP-bdg_M	3.07
PF00118	Cpn60_TCP1	1.84
PF07638	Sigma70_ECF	1.84
PF03972	MmgE_PrpD	1.84
PF01558	POR	1.23
PF00849	PseudoU_synth_2	1.23
PF02943	FeThRed_B	0.61
PF06068	TIP49	0.61
PF00289	Biotin_carb_N	0.61
PF00166	Cpn10	0.61
PF02310	B12-binding	0.61
PF13743	Thioredoxin_5	0.61
PF04545	Sigma70_r4	0.61
PF04185	Phosphoesterase	0.61
PF09587	PGA_cap	0.61

COG ID	Name	Functional Category	% Frequency in 163 Family Scaffolds
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	1.84
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.84
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	1.84
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	1.23
COG1014	Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, gamma subunit	Energy production and conversion [C]	1.23
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	1.23
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.61
COG1224	DNA helicase TIP49, TBP-interacting protein	Transcription [K]	0.61
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.61
COG4802	Ferredoxin-thioredoxin reductase, catalytic subunit	Energy production and conversion [C]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.69 %
Unclassified	root	N/A	23.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.69 %
Unclassified	root	N/A	23.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.69 %
Unclassified	root	N/A	23.31 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	49.08 %
Unclassified	root	N/A	23.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.23 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	39.26 %
Unclassified	root	N/A	23.31 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.84 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.13 %
Unclassified	root	N/A	23.31 %
Acidobacteria bacterium 13_1_40CM_56_16	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	6.13 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.23 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.13 %
Unclassified	root	N/A	23.31 %
Acidobacteria bacterium 13_1_40CM_56_16	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	6.13 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.23 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10011972	All Organisms → cellular organisms → Bacteria	3098	Open in IMG/M
3300002560\|JGI25383J37093_10007803	All Organisms → cellular organisms → Bacteria	3462	Open in IMG/M
3300002562\|JGI25382J37095_10122291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	886	Open in IMG/M
3300002908\|JGI25382J43887_10044790	All Organisms → cellular organisms → Bacteria	2405	Open in IMG/M
3300002908\|JGI25382J43887_10248345	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300005166\|Ga0066674_10037337	All Organisms → cellular organisms → Bacteria	2165	Open in IMG/M
3300005166\|Ga0066674_10100739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1341	Open in IMG/M
3300005166\|Ga0066674_10192020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	971	Open in IMG/M
3300005167\|Ga0066672_10772880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300005171\|Ga0066677_10715359	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300005172\|Ga0066683_10055351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2349	Open in IMG/M
3300005172\|Ga0066683_10442947	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300005174\|Ga0066680_10277744	Not Available	1068	Open in IMG/M
3300005175\|Ga0066673_10378635	All Organisms → cellular organisms → Bacteria → Acidobacteria	826	Open in IMG/M
3300005176\|Ga0066679_10863565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300005177\|Ga0066690_10261298	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1163	Open in IMG/M
3300005177\|Ga0066690_10391197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300005177\|Ga0066690_10846002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300005179\|Ga0066684_10414055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	905	Open in IMG/M
3300005180\|Ga0066685_10535790	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	808	Open in IMG/M
3300005180\|Ga0066685_10955428	Not Available	569	Open in IMG/M
3300005181\|Ga0066678_10188211	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300005186\|Ga0066676_10630397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300005187\|Ga0066675_11365408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300005446\|Ga0066686_10755086	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300005446\|Ga0066686_10763662	Not Available	647	Open in IMG/M
3300005447\|Ga0066689_10092859	All Organisms → cellular organisms → Bacteria → Acidobacteria	1716	Open in IMG/M
3300005447\|Ga0066689_10562741	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300005451\|Ga0066681_10629171	Not Available	659	Open in IMG/M
3300005467\|Ga0070706_102088640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300005468\|Ga0070707_100124169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2507	Open in IMG/M
3300005518\|Ga0070699_100032630	All Organisms → cellular organisms → Bacteria	4497	Open in IMG/M
3300005536\|Ga0070697_101132977	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300005536\|Ga0070697_102091814	Not Available	507	Open in IMG/M
3300005552\|Ga0066701_10134229	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300005552\|Ga0066701_10585628	Not Available	681	Open in IMG/M
3300005552\|Ga0066701_10754465	Not Available	582	Open in IMG/M
3300005556\|Ga0066707_10948572	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300005557\|Ga0066704_10090049	All Organisms → cellular organisms → Bacteria	2001	Open in IMG/M
3300005558\|Ga0066698_10455521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	872	Open in IMG/M
3300005569\|Ga0066705_10008673	All Organisms → cellular organisms → Bacteria	4697	Open in IMG/M
3300005569\|Ga0066705_10404505	Not Available	855	Open in IMG/M
3300005574\|Ga0066694_10416584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300005586\|Ga0066691_10390289	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	826	Open in IMG/M
3300005586\|Ga0066691_10548412	Not Available	689	Open in IMG/M
3300005598\|Ga0066706_10668138	Not Available	825	Open in IMG/M
3300006032\|Ga0066696_10940362	Not Available	550	Open in IMG/M
3300006046\|Ga0066652_101245270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300006791\|Ga0066653_10645251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300006794\|Ga0066658_10087669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1439	Open in IMG/M
3300006796\|Ga0066665_11343720	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300006797\|Ga0066659_10082234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2140	Open in IMG/M
3300006797\|Ga0066659_10158457	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300006797\|Ga0066659_11152049	Not Available	648	Open in IMG/M
3300006800\|Ga0066660_10721173	Not Available	816	Open in IMG/M
3300006854\|Ga0075425_101201442	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300006871\|Ga0075434_100181114	Not Available	2127	Open in IMG/M
3300006914\|Ga0075436_101159337	Not Available	583	Open in IMG/M
3300007255\|Ga0099791_10026477	Not Available	2521	Open in IMG/M
3300009012\|Ga0066710_100052166	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5072	Open in IMG/M
3300009012\|Ga0066710_100536251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1769	Open in IMG/M
3300009012\|Ga0066710_100884129	Not Available	1374	Open in IMG/M
3300009090\|Ga0099827_10117930	Not Available	2133	Open in IMG/M
3300009137\|Ga0066709_102003973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300009137\|Ga0066709_104349104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300009147\|Ga0114129_12529933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300009691\|Ga0114944_1456326	Not Available	542	Open in IMG/M
3300010080\|Ga0127448_111680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	507	Open in IMG/M
3300010080\|Ga0127448_111976	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300010099\|Ga0127450_1020610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	681	Open in IMG/M
3300010134\|Ga0127484_1075699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	550	Open in IMG/M
3300010303\|Ga0134082_10030938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2010	Open in IMG/M
3300010304\|Ga0134088_10091156	All Organisms → cellular organisms → Bacteria → Acidobacteria	1430	Open in IMG/M
3300010325\|Ga0134064_10045538	Not Available	1332	Open in IMG/M
3300010326\|Ga0134065_10085111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1028	Open in IMG/M
3300010329\|Ga0134111_10084364	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1201	Open in IMG/M
3300010333\|Ga0134080_10172777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	925	Open in IMG/M
3300010335\|Ga0134063_10064765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1617	Open in IMG/M
3300010335\|Ga0134063_10491215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300010336\|Ga0134071_10259391	All Organisms → cellular organisms → Bacteria → Acidobacteria	867	Open in IMG/M
3300010336\|Ga0134071_10780628	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300012189\|Ga0137388_11989184	Not Available	510	Open in IMG/M
3300012199\|Ga0137383_10147473	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300012199\|Ga0137383_11335076	Not Available	510	Open in IMG/M
3300012200\|Ga0137382_11099584	Not Available	568	Open in IMG/M
3300012201\|Ga0137365_10106057	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
3300012202\|Ga0137363_10467820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1056	Open in IMG/M
3300012202\|Ga0137363_11007699	Not Available	707	Open in IMG/M
3300012203\|Ga0137399_10949696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300012205\|Ga0137362_10853799	Not Available	779	Open in IMG/M
3300012206\|Ga0137380_11447062	Not Available	572	Open in IMG/M
3300012208\|Ga0137376_10598184	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300012209\|Ga0137379_11255716	Not Available	647	Open in IMG/M
3300012285\|Ga0137370_10296179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	965	Open in IMG/M
3300012351\|Ga0137386_10967262	Not Available	607	Open in IMG/M
3300012351\|Ga0137386_11215381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300012357\|Ga0137384_10448706	Not Available	1062	Open in IMG/M
3300012359\|Ga0137385_10392716	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300012362\|Ga0137361_11240929	Not Available	669	Open in IMG/M
3300012362\|Ga0137361_11802189	Not Available	530	Open in IMG/M
3300012373\|Ga0134042_1242282	Not Available	528	Open in IMG/M
3300012376\|Ga0134032_1055253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	655	Open in IMG/M
3300012380\|Ga0134047_1026427	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300012380\|Ga0134047_1223346	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300012386\|Ga0134046_1058923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	1062	Open in IMG/M
3300012390\|Ga0134054_1228521	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300012393\|Ga0134052_1162020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	699	Open in IMG/M
3300012396\|Ga0134057_1115442	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300012399\|Ga0134061_1274502	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300012402\|Ga0134059_1253725	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300012406\|Ga0134053_1028518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	805	Open in IMG/M
3300012409\|Ga0134045_1418944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	950	Open in IMG/M
3300012410\|Ga0134060_1124814	All Organisms → cellular organisms → Bacteria → Acidobacteria	685	Open in IMG/M
3300012685\|Ga0137397_10000193	All Organisms → cellular organisms → Bacteria	40525	Open in IMG/M
3300012917\|Ga0137395_10284438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1168	Open in IMG/M
3300012922\|Ga0137394_10036552	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4012	Open in IMG/M
3300012922\|Ga0137394_10740795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300012925\|Ga0137419_10017483	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4095	Open in IMG/M
3300012927\|Ga0137416_10709687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	884	Open in IMG/M
3300012929\|Ga0137404_10016127	All Organisms → cellular organisms → Bacteria	5295	Open in IMG/M
3300012976\|Ga0134076_10255650	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300012976\|Ga0134076_10464211	Not Available	573	Open in IMG/M
3300012976\|Ga0134076_10533717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300012977\|Ga0134087_10073537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1389	Open in IMG/M
3300014157\|Ga0134078_10055621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1382	Open in IMG/M
3300015241\|Ga0137418_10260703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1466	Open in IMG/M
3300015264\|Ga0137403_10008794	All Organisms → cellular organisms → Bacteria → Acidobacteria	11290	Open in IMG/M
3300017657\|Ga0134074_1035646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1667	Open in IMG/M
3300017659\|Ga0134083_10050615	All Organisms → cellular organisms → Bacteria → Acidobacteria	1563	Open in IMG/M
3300018431\|Ga0066655_10112168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1549	Open in IMG/M
3300018431\|Ga0066655_10539272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300018433\|Ga0066667_10623444	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300018433\|Ga0066667_12310071	Not Available	504	Open in IMG/M
3300018468\|Ga0066662_10287113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1372	Open in IMG/M
3300018468\|Ga0066662_10440696	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300018482\|Ga0066669_10443986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1112	Open in IMG/M
3300018482\|Ga0066669_12283385	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300019789\|Ga0137408_1399847	All Organisms → cellular organisms → Bacteria → Acidobacteria	4140	Open in IMG/M
3300022563\|Ga0212128_10208479	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300025910\|Ga0207684_11599768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300025922\|Ga0207646_10110869	All Organisms → cellular organisms → Bacteria	2462	Open in IMG/M
3300025922\|Ga0207646_10169231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1973	Open in IMG/M
3300026296\|Ga0209235_1006226	All Organisms → cellular organisms → Bacteria → Acidobacteria	6677	Open in IMG/M
3300026296\|Ga0209235_1083427	Not Available	1420	Open in IMG/M
3300026306\|Ga0209468_1040189	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1610	Open in IMG/M
3300026307\|Ga0209469_1014920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2823	Open in IMG/M
3300026313\|Ga0209761_1168297	All Organisms → cellular organisms → Bacteria → Acidobacteria	1013	Open in IMG/M
3300026313\|Ga0209761_1335873	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300026324\|Ga0209470_1168554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	953	Open in IMG/M
3300026326\|Ga0209801_1185022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300026327\|Ga0209266_1028280	All Organisms → cellular organisms → Bacteria	3002	Open in IMG/M
3300026332\|Ga0209803_1086033	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300026528\|Ga0209378_1218705	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300026540\|Ga0209376_1039786	All Organisms → cellular organisms → Bacteria → Proteobacteria	2820	Open in IMG/M
3300026540\|Ga0209376_1055437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2248	Open in IMG/M
3300026547\|Ga0209156_10394263	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300027643\|Ga0209076_1220125	Not Available	516	Open in IMG/M
3300027882\|Ga0209590_10327750	Not Available	985	Open in IMG/M
3300028536\|Ga0137415_10027811	All Organisms → cellular organisms → Bacteria	5575	Open in IMG/M
3300030990\|Ga0308178_1033976	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300032180\|Ga0307471_102640917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300034681\|Ga0370546_008446	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300034681\|Ga0370546_049911	Not Available	644	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.55%
Host-Associated	Host-Associated	2.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.32%
Plants	Host-Associated → Plants	2.45%
Aquatic	Environmental → Aquatic	1.23%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.45%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.23%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.18%
Loam	Environmental → Terrestrial → Soil → Loam	6.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.45%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.23%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	46.01%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.45%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	1.23%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	32.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	20.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	13.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.84%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	1.23%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.23%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300010080	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010099	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010134	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012376	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012399	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100119722	3300002558	Grasslands Soil	MLQTDKNPELDERVWQAWIKKNEAQDKVRFARRLRITGLATAFLALSALLWKLT*
JGI25383J37093_100078032	3300002560	Grasslands Soil	MLQTDKNPELDERVWQTWIKKNEAQDKVRFARRLTITGLATAFLALSALLWKLT*
JGI25382J37095_101222911	3300002562	Grasslands Soil	MLQTDKNPELDERVWQAWIKKNEAQDKVRFARRLRITGLATAFLGLSALLWKLT*
JGI25382J43887_100447902	3300002908	Grasslands Soil	MLQTDKNPELDERVWQTWIKKNEAQDKVRFARRLRITGLATAFLALSALLWKLT*
JGI25382J43887_102483451	3300002908	Grasslands Soil	GVNKRAMLQTGNNPELDERVWQAWIKKNAAQDKVRFARRVRVIGFVTAIVAVSALLWRLV
Ga0066674_100373374	3300005166	Soil	MPQTDKSPELDERVWQAWIKKNAAQDRARFVRRVRVLGIVTAFLGLIVLLWRLAM*
Ga0066674_101007392	3300005166	Soil	MLQTDKNPELDERVWQAWVKKNEAQDKVRFARRVRVIGLVTAFLALSALLWKLT*
Ga0066674_101920202	3300005166	Soil	MQTDKIPELDERVWQAWIKKNEAQDKIRFARRVKVVGLVTAFLLLGALLVKLA*
Ga0066672_107728801	3300005167	Soil	MVVNKDTVTQTDKQPELDEKVWQAWLAKNAAQDKVRFARRVKVIGFVAVALVL
Ga0066677_107153592	3300005171	Soil	DKNLEIDERVWQAWIEKNAAQDKVRFARRVKRIGIASVFLALSALLWKAYSG*
Ga0066683_100553511	3300005172	Soil	MLQTDKSPELDERVWQAWIKKNAAQDRARFVRRVRVLGIVTAFLGLIALLWRLAM*
Ga0066683_104429472	3300005172	Soil	MLQTDKNPELDERVWQAWIKKNEAQDKVRFARRLRITGLVTALLALSALLWRLT*
Ga0066680_102777443	3300005174	Soil	VVNYTYAANDKSPELDERVWQAWINWIKKNAAQDRARFVRCVRVLGIVTAFLGL
Ga0066673_103786351	3300005175	Soil	MPQIDQNPQLDERTWQAWIEKNEARDKVRFARRIKMIGIVALLLALSALLWRAYSV*
Ga0066679_108635651	3300005176	Soil	MVVNKDTVTQTDKQPELDEKVWQAWLAKNAAQDKVRFARRVKVIGFVAVA
Ga0066690_102612981	3300005177	Soil	MQTDKIPELDERVWQAWIKKNEAQDKIRFARRVKVVGLVTAFLLL
Ga0066690_103911972	3300005177	Soil	MSKIDNNRQVDERTWQAWIQKNEAQDKVRFARRVKVIELVSLFLALSALLWRFTM*
Ga0066690_108460021	3300005177	Soil	MLQTDKNPELDERVWQAWIKKNEAQDKVRFARRVRVIGLVTAFLALSALLWKLT*
Ga0066684_104140552	3300005179	Soil	MVKMDNNRRVDERTWQAWIQKNEAQDKVRFARRVKVIELVSLFLALSVLLWRFTM*
Ga0066685_105357901	3300005180	Soil	VVNYTYAANDKSPELDERVWQAWINWIKKNAAQDRARFVRCVRVLGIVTAFLALIALLWRLPCNRNGAAT*
Ga0066685_109554281	3300005180	Soil	QHTELDDRIWQAWIQKNAAQDKVRFARRVKIIGIVSVFLALSALLWKAYAG*
Ga0066678_101882111	3300005181	Soil	PELDERVWQAWLAKNAAQDQVRFARRVKIIGFLAVALVLFGLLWRLT*
Ga0066676_106303971	3300005186	Soil	NPELDERVWQAWIKKNEAQDKVRFARRLRITGLATAFLALSALLWKLT*
Ga0066675_113654082	3300005187	Soil	RVNKRTMLQTDKNPELDERVWQAWIKKNEAQDKVRFARRLRITGLATAFLALSALLWKLT
Ga0066686_107550861	3300005446	Soil	ELDERVWQAWIKKNAAQDRARFVRRVRVLGIVTAFLGLIALLWRLAM*
Ga0066686_107636622	3300005446	Soil	MPQIEQNPQLDERTWQAWMQKNEARDKVRSARRLKLIGIVALLLALSALLWRAYSV*
Ga0066689_100928591	3300005447	Soil	KNPELDERVWQAWIKKNEAQDKVRFARRLRITGLVTAFLALSALLWRLT*
Ga0066689_105627413	3300005447	Soil	MLQTDKNTELDERVWQAWIKKNEAQDKVRFARRVRVIGLVTAFLALSALLWRLT*
Ga0066681_106291711	3300005451	Soil	VSQTDKSPELDERVWQAWLAKNAAQDKVRFARRVKVIGFLAVALALFGLLWRLT*
Ga0070706_1020886401	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	TAPMIVNKDTVLQTDKQPELDERVWQAWLAKNAAQDKVRFSRRVRVIGFVAVALMLFGLLWRLT*
Ga0070707_1001241694	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSEMDNNRQVDERTWQAWIQKNEAQDKVRFARRVKVIELVFLFLALSALLWRFTM*
Ga0070699_1000326304	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MIVNKDTVLQTDKQPELDERVWQAWLAKNAAQDKVRFSRRVRVIGFVAGALMLFGLLWRLT*
Ga0070697_1011329771	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MIVNKDTVLQTDKQPELDERVWQAWLAKNAAQDKVRFSRRVRVIGFVAVALVLLGLLWRLT*
Ga0070697_1020918141	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MQDTDKAPQLDERIWQAWIKKNAAQDKFRFARRVRVIGLLSAFLALSAVLWRLA*
Ga0066701_101342292	3300005552	Soil	MLQTGNNPELDERVWQAWIKKNAAQDKVRFARRVRVIGFVTAIVAVSALLWRLV*
Ga0066701_105856283	3300005552	Soil	MQDTNKEPQLDERIWQAWIKKNAAQDKFRFARRVRVIGLLSAFLALSAVLWRLA*
Ga0066701_107544652	3300005552	Soil	MPQIEQNPQLDERTWQGWIQKNEGRDKVRFARRVKMIGIVALLLALSALLWRAYSV*
Ga0066707_109485722	3300005556	Soil	MQTDKIPELDERVWQAWIKKNEAQDKIRFARRVKVVGLVTAFLLLGALLAKLA*
Ga0066704_100900491	3300005557	Soil	VVNKMQTDKIPELDERVWQAWIKKNEAQDKIRFARRVKVVGLVTAFLLLGALLVKLA*
Ga0066698_104555212	3300005558	Soil	MLQTDKNPELDERVWQAWIKKNEAQDKIRFARRVKVVGLVTAFLLLGALLVKLA*
Ga0066705_100086732	3300005569	Soil	MLQTDKNPELDERVWQAWIKKNEAQDKVRFARRLRVTGLVTAFLALSALLWRLT*
Ga0066705_104045052	3300005569	Soil	MPQMVHHTELDDRIWQAWIQKNAAQDKVRFARRVKIIGIVSVFLALSALLWKAYAG*
Ga0066694_104165841	3300005574	Soil	MLQTDKSPELDERVWQAWIKKNAAQDRARFVRRVRVLGIVTAFLGLIVLLWRLAM*
Ga0066691_103902893	3300005586	Soil	KTIRLQTGKSPELDERVWQAWIKKNAAQDRARFVQRVRVLGIVTAFLGLIALLWRLAM*
Ga0066691_105484122	3300005586	Soil	MQDTNKEPQLDERIWQAWIKKNAAQDKFRFARRVRVIGLLSAFLALSALLWRLA*
Ga0066706_106681382	3300005598	Soil	MVVNKDTVTQTDKQPELDEKVWQAWLAKNAAQDKVRFARRVKVIGFLAVALVLFGLLWRLT*
Ga0066696_109403621	3300006032	Soil	MVVNKDTVTQTDKQPELDEKVWQAWLAKNAAQDKVRFARRVRVIGFVAVALVLLGLLWRLT*
Ga0066652_1012452701	3300006046	Soil	VSQTDKSPKLDERVWQAWLAKNAAQDKVRFARRVKVIGFLAVALVLFGLLWRLT*
Ga0066653_106452512	3300006791	Soil	MLQTDKNPELDERVWQAWIKKNEAQDKVRFARRLRITGLVTALL
Ga0066658_100876692	3300006794	Soil	MLQTATNPELDERVWQAWIKKNEAQDKVRFARRVRVIGLVTAFLALSALLWKLT*
Ga0066665_113437203	3300006796	Soil	PELDERVWQAWIKKNEAQDKVRFARRVRVIGLVTAFLALSALLWRLT*
Ga0066659_100822345	3300006797	Soil	MVVNKETVSQTDKNPELDERVWQAWLAKNAAQDQVRFARRVKIIGFLAVALVLFGL
Ga0066659_101584573	3300006797	Soil	MQDTNKEPQLDERIWQAWIKKNAAQDKFRFARRVRVIGLLSALLALSAVLWRLA*
Ga0066659_111520491	3300006797	Soil	MLQTDKNPELDERVWQAWIKKNAAQDKVRFARRVRVIGFVTAIVAVSALLWRLV*
Ga0066660_107211732	3300006800	Soil	MPHMEQHTELDERIWQAWIQKNAPQDKVRFARRVKIIGIVSVFLALSALLWKAYAG*
Ga0075425_1012014422	3300006854	Populus Rhizosphere	MTVNKDTVMQTAKEPELDERVWQAWLAKNAAQDKVRFSRRVRVIGFAAVALVFFGLLWRAYLGLSSTGGPVF*
Ga0075434_1001811141	3300006871	Populus Rhizosphere	MVVNKDIVTQTEKQPELDEKVWQAWLAKNAAQDKVRFARRVKVIGFVAVALVLLGLLWRLT*
Ga0075436_1011593371	3300006914	Populus Rhizosphere	MIVNKDTVLQTDKQPELDERVWQAWLAKNAAQDKVRFSRRVRVIGFVAVALVLFGLLWRLT*
Ga0099791_100264774	3300007255	Vadose Zone Soil	MQDTNKEPQLDEHIWQAWIKKNAAQDKFRFARRVRVIGLLSAFLALSALLWRLA*
Ga0066710_1000521663	3300009012	Grasslands Soil	MPQIEQNPQLDERTWQAWIQKTEARDKVRSARRLKLIGIVALLLALSALLWRAYSV
Ga0066710_1005362512	3300009012	Grasslands Soil	MLQTDKNPELDERVWQAWIKRNEAQDKVRFARRVRVIGLVTAFLALSALLWKLT
Ga0066710_1008841293	3300009012	Grasslands Soil	MPQIDQQTELDDRIWQAWIQKNAAQDKVRFARRVKIIGIVSVFLALSALLWKAYAG
Ga0099827_101179304	3300009090	Vadose Zone Soil	MQDTDKAPELDERIWQAWIKKNAAQDKFRFARRVRVIGLLSAFLALSAVLWRLA*
Ga0066709_1020039732	3300009137	Grasslands Soil	MVVNKDTVTQTDKQPELDEKVWQAWLAKNAAQDKVRFARRVKVIGFVAVALVLLGLLWRLT*
Ga0066709_1043491041	3300009137	Grasslands Soil	MPQTDPIPQLDERVWQAWIEKNKAPDKIRFAGRAKVVGFVTAFLILGALLA*
Ga0114129_125299332	3300009147	Populus Rhizosphere	MSQTDQNTQIDERIWQAWIQKNAAQDKVRFARRVKVIGIAMVFVALSALLWRAYAG*
Ga0114944_14563262	3300009691	Thermal Springs	MQQTEQSPQIDERVWQAWIKKNEAKDKARFKRRVKVIKLVSVLALGVLLWRFTT*
Ga0127448_1116801	3300010080	Grasslands Soil	LMLQTDKSPELDERVWQAWIKKNAAQDRARFVRRVRVLGIVTAFLGLIALLWRLAM*
Ga0127448_1119761	3300010080	Grasslands Soil	LDERVWQAWIKKNEAQDKVRFARRLRITGLVTALLALSALLWRLT*
Ga0127450_10206101	3300010099	Grasslands Soil	PQTDKSPELDERVWQAWIKKNAAQDRARFVRRVRVLGIVTAFLGLIVLLWRLAM*
Ga0127484_10756991	3300010134	Grasslands Soil	TLMLQTDKSPELDERVWQAWIKKNAAQDRARFVRRVRVLGIVTAFLGLIALLWRLAM*
Ga0134082_100309382	3300010303	Grasslands Soil	MLQTDKNPELDERVWQAWIKKNEAQDKVRFARRLRITGLATAFLALSALLWRLT*
Ga0134088_100911563	3300010304	Grasslands Soil	MLQTDKSPELDERVWQAWIKKNAAQDKVRFARRVKVLGMATAFLGLIALLWWLA*
Ga0134064_100455383	3300010325	Grasslands Soil	MLQTDKNPELDERVWQAWIKKNEAQDKVRFARRLRITGLVTALLALSALL
Ga0134065_100851113	3300010326	Grasslands Soil	NKRTMLQTDKNPELDERVWQAWIKKNEAQDKVRFARRLRITGLVTAFLALSALLWRLT*
Ga0134111_100843643	3300010329	Grasslands Soil	MLQTDKNPELDERIWQDWIKKNEAQDKVRFARRVRVIGLVTAFLALSALLWKLT*
Ga0134080_101727773	3300010333	Grasslands Soil	DERVWQAWIKKNAAQDRARFVRRVRVLGIVTAFLGLIALLWRLAM*
Ga0134063_100647653	3300010335	Grasslands Soil	MLQTDKNPELDERVWQAWIKKNEAQDKVRFARRLRITGLATAFLTLSALLW
Ga0134063_104912152	3300010335	Grasslands Soil	MLQTDKNQELDERVWQAWIKKNEAQDKVRFARRVRVIGLVTAFLALSALLWKLT*
Ga0134071_102593911	3300010336	Grasslands Soil	AKSPELDERVWQAWIKKNAAQDRARFVQRLRVPGIVTAFLGLIALLWRLV*
Ga0134071_107806281	3300010336	Grasslands Soil	ELDERVWQAWIKKNEAQDKVRFARRVRVIGLVTAFLALSALLWRLT*
Ga0137388_119891841	3300012189	Vadose Zone Soil	MPQIDQHPELDDRIWQAWIEKNAAQDKVRFARRVKIIRIVSVFLALSALLWKAYAG*
Ga0137383_101474732	3300012199	Vadose Zone Soil	MPQIEQNPQLDERTWQAWIEKNEARDKVRFALRVKMIGIVALLLALSALLWIAYSV*
Ga0137383_113350762	3300012199	Vadose Zone Soil	ERVWQTWIKKNEAQDKVRFARRLRITGLATAFLALSALLWKLT*
Ga0137382_110995842	3300012200	Vadose Zone Soil	MLQTDKNPELDERVWQAWVKKNEAQDKVRFARRVRVIGLATAFLALSALLWKLT*
Ga0137365_101060572	3300012201	Vadose Zone Soil	MLQTDKNPELDERVWQAWIKKNEAQDKVRFARRVRVIGLVTAFLALSALLWRLT*
Ga0137363_104678202	3300012202	Vadose Zone Soil	MSKMDNNRQVDERTWQAWIQKNEAQDKVRFARRVKVIELVSLFLALSALLWRFTM*
Ga0137363_110076992	3300012202	Vadose Zone Soil	MSHIDQHTELDDRIWQAWIQKNAAQDKARFARRVKIIGIVSVFLALSGLLWKAYEG*
Ga0137399_109496962	3300012203	Vadose Zone Soil	MDNNRQVNERTWQAWIQKNEAQAKVRFARRVKVIELVSLFLAVNALLWRFTM*
Ga0137362_108537991	3300012205	Vadose Zone Soil	MSKMDNNRQVDERTWQAWIQKNEAQDKVRFARRVKVIELLSLFLALSALLWRFTM*
Ga0137380_114470622	3300012206	Vadose Zone Soil	MLQTDKNPELDERVWQAWIKKNEAQDKVRFARRVRVIGLVTAFLALSALLWT*
Ga0137376_105981842	3300012208	Vadose Zone Soil	MLQTDKNPELDERVWQAWVKKNEAQDKVRFARRVRVIGLVTAFLALSALLWRLT*
Ga0137379_112557162	3300012209	Vadose Zone Soil	MPQIEQNPQLDERAWQAWIQKNAARDKVRFARRVKMIGIVALLLALSALLWRAYSV*
Ga0137370_102961792	3300012285	Vadose Zone Soil	MVVNKETVSQTDKNPELDERVWQAWLAKNAAQDKVRFARRVKVIGFLAVALVLFGLLWRLT*
Ga0137386_109672621	3300012351	Vadose Zone Soil	IWQTWIRKNKAQDKVRFARRVKMIGILALLLALSALLWRAYSV*
Ga0137386_112153811	3300012351	Vadose Zone Soil	TMLQTDKNPELDERVWQAWIKKNEAQDKVRFARRVRVIGLVTAFLALSALLWKLT*
Ga0137384_104487062	3300012357	Vadose Zone Soil	MPQIDQNPQLDERTWQAWIEKNEARDKVKSARRVKMTGILALLLVLSALLWRAYSV*
Ga0137385_103927162	3300012359	Vadose Zone Soil	MLQTDKNPELDERVWQAWIKKNEAQDKVRFARRLRVTGLVTAFLALSAMLWRLT*
Ga0137361_112409291	3300012362	Vadose Zone Soil	MLQTGNNPELDESVWQAWIKKNAAQDKVRFARRVRAIGFVTAIVAVSALLWRLV*
Ga0137361_118021891	3300012362	Vadose Zone Soil	TIMPQVEQNPQLDERTWQAWIQKNAARDKVRFARRVKMIGIVALLLALSALLWRAYSV*
Ga0134042_12422821	3300012373	Grasslands Soil	KRTMLQTDKNPELDERVWQAWIKKNEAQDKVRFARRVRVIGLVTAFLALSALLWKLT*
Ga0134032_10552531	3300012376	Grasslands Soil	IKLMPQTDKSPELDERVWQAWIKKNAAQDRARFVRCVRVLGIVTAFLGLIVLLWRLAM*
Ga0134047_10264271	3300012380	Grasslands Soil	KRTMLQTDKNPELDERVWQAWIKKNEAQDKVRFARRLRITGLVTAFLALSALLWRLT*
Ga0134047_12233461	3300012380	Grasslands Soil	PELDERVWQAWIKKNAAQDRARFVRRVRVLGIVTAFLGLIALLWRLAM*
Ga0134046_10589234	3300012386	Grasslands Soil	TLMLQTDKSPELDERVWQAWIKKNAAQDRARFVRRVRVLGIVTAFLGLIVLLWRLAM*
Ga0134054_12285211	3300012390	Grasslands Soil	KRTMLQTDKNPELDERVWQAWIKKNEAQDKVRFARRLRITGLVTALLALSALLWRLT*
Ga0134052_11620201	3300012393	Grasslands Soil	LDERVWQAWIKKNAAQDRARFVRRVRVLGIVTAFLGLIVLLWRLAM*
Ga0134057_11154421	3300012396	Grasslands Soil	GVNKRTMLQTDKNPELDERVWQAWIKKNEAQDKVRFARRLRITGLVTALLALSALLWRLT
Ga0134061_12745021	3300012399	Grasslands Soil	KNPELDERVWQAWIKKNEAQDKVRFARRLRITGLVTAFLALSALLWKLT*
Ga0134059_12537251	3300012402	Grasslands Soil	KRTMLQTDKNPELDERVWQAWIKKNEAQDKVRFARRLRITGFVTAFLALSALLWRLT*
Ga0134053_10285183	3300012406	Grasslands Soil	KLMPQTDKSPELDERVWQAWIKKNAAQDRARFVRRVRVLGIVTAFLGLIVLLWRLAM*
Ga0134045_14189441	3300012409	Grasslands Soil	KSPELDERVWQAWIKKNAAQDRARFVRRVRVLGIVTAFLGLIALLWRLAM*
Ga0134060_11248141	3300012410	Grasslands Soil	RVWQAWIKKNAAQDKVRFARRVKVLGMATAFLGLIALLWWLA*
Ga0137397_1000019311	3300012685	Vadose Zone Soil	MIQTANDPQLDERIWQAWLKKNAAQDKFRFERRVKVLKVISVCLALGALLWAFTR*
Ga0137395_102844382	3300012917	Vadose Zone Soil	MSKMANSRQVAERTWQAWIQKNEAQDKVRFARRVKVIELVSLFLAVSALLSRFTM*
Ga0137394_100365525	3300012922	Vadose Zone Soil	MQDTNKEPQLDERIWQAWIKKNAAQDKFRFARRVRVIGLLSALLALSAVLWKLA*
Ga0137394_107407952	3300012922	Vadose Zone Soil	MDNNRQVDERTWQAWIQKNEAQDKVRFARRVKIIELVSLFLALSALLWRFTM*
Ga0137419_100174834	3300012925	Vadose Zone Soil	MQDTNKEPQLDEHIWQAWIKKNAAQDKFRFARRVRVIGLLSALLALSAVLWRLA*
Ga0137416_107096871	3300012927	Vadose Zone Soil	MSKMDNNRQVDERTWQAWIQKNEAQDKVRFARRVKIIELVSLFLALSALLWRFT
Ga0137404_100161278	3300012929	Vadose Zone Soil	MQDTDKAPQLDERIWQAWIKKNAAQDKFRFARRVRVIGLLSAFLALSALLWRLA*
Ga0134076_102556502	3300012976	Grasslands Soil	DKSPELDERVWQAWIKKNAAQDKVRFARRVKVLGMATAFLGLIALLWWLA*
Ga0134076_104642112	3300012976	Grasslands Soil	MPQIDQHTELDDRIWQAWIQKNAAQDKVRFARRVKRIGIASVFLALSALLWKAYAG*
Ga0134076_105337171	3300012976	Grasslands Soil	TMLQTDKNPELDEHVWQAWIKKNEAQDKVRFARRLRVIGLVTAFLALSALLWKLT*
Ga0134087_100735373	3300012977	Grasslands Soil	MLQTATNPELDERVWQAWIKKNEAQDKVRFARRLRITGLVTALLALS
Ga0134078_100556213	3300014157	Grasslands Soil	MLQTDKNPELDERVWQAWIKKNEAQDKVRFARRLRITGLVTAFLALSALLWRLT*
Ga0137418_102607031	3300015241	Vadose Zone Soil	MSETANGRQVDERTWQAWIQKNEAQDKVRFARRVKVIELVSLFLALSALLWRFTM*
Ga0137403_1000879415	3300015264	Vadose Zone Soil	MQDTDKAPQLDERIWQAWIKKNAAQDKFRFARRVRVIGLLSALLALSAVLWRLA*
Ga0134074_10356462	3300017657	Grasslands Soil	MLQTDKNPELDERVWQAWIKKNEAQDKVRFARRLRVTGLATAFLALSALLWKLT
Ga0134083_100506151	3300017659	Grasslands Soil	SPQLDERVWQAWIKKNAAQDKVRFARRVKVLGMATAFLGLIALLWWLA
Ga0066655_101121682	3300018431	Grasslands Soil	MLQTDKNPELDERVWQAWIKKNEAQDKVRFARRVRVIGLVTAFLALSALLWKLT
Ga0066655_105392721	3300018431	Grasslands Soil	NPELDERVWQAWIKKNEAQDKVRFARRLRITGLATAFLGLSALLWKLT
Ga0066667_106234441	3300018433	Grasslands Soil	MQTDKIPELDERVWQAWIKKNEAQDKIRFARRVKVVGLVTAFLLLGALLVKLA
Ga0066667_123100711	3300018433	Grasslands Soil	MLQTATNPELDERVWQAWIKKNEAQDKVRFARRVRVIGLVTAFLALSALLWRLT
Ga0066662_102871132	3300018468	Grasslands Soil	MQDTDKAPQLDERIWQAWIKKNAAQDKFRFARRVRVIGLLSAFLALSAVLWRLA
Ga0066662_104406962	3300018468	Grasslands Soil	MLQTGNNPELDESVWQAWIKKNAAQDKVRFARRVRVIGFVTAIVAVSALLWRLV
Ga0066669_104439861	3300018482	Grasslands Soil	ERVWQAWIKKNEAQDKVRFARRLRITGLATAFLALSALLWKLT
Ga0066669_122833851	3300018482	Grasslands Soil	MPQTDKSPELDERVWQAWIKKNAAQDRARFVRRVRVLGIVTAFLGLI
Ga0137408_13998474	3300019789	Vadose Zone Soil	VEQTDQNLQIDERVWQAWIQKNAAQDKIRFARRVKITGIVSVFLALSALLWKAYAG
Ga0212128_102084793	3300022563	Thermal Springs	MPEIDKNPQLDERIWRAWIQKNEAQDKVRFTRRVRVIALASAFAAPLLLWLVAPRRPNPAPG
Ga0207684_115997681	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	TAPMIVNKDTVLQTDKQPELDERVWQAWLAKNAAQDKVRFSRRVRVIGFVAVALMLFGLLWRLT
Ga0207646_101108693	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MVVNNTVMQTDKQPELDERVWQAWLAKNAAQDKVRFSRRVRVIGFVAVALVLFGLLWRLS
Ga0207646_101692314	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSEMDNNRQVDERTWQAWIQKNEAQDKVRFARRVKVIELVFLFLALSALLWRFTM
Ga0209235_10062264	3300026296	Grasslands Soil	MLQTDKNPELDERVWQTWIKKNEAQDKVRFARRLTITGLATAFLALSALLWKLT
Ga0209235_10834273	3300026296	Grasslands Soil	MSKMDNNRQVDERTWQAWIQKNEAQDKVRFARRVKVIELVSLFLALSALLWRFTM
Ga0209468_10401892	3300026306	Soil	MLQTDKNPELDERVWQAWVKKNEAQDKVRFARRVRVIGLATAFLALSALLWKLT
Ga0209469_10149204	3300026307	Soil	MLQTDKNPELDERVWQAWVKKNEAQDKVRFARRVRVIGLVTAFLALSALLWKLT
Ga0209761_11682972	3300026313	Grasslands Soil	MLQTDKIPELDERVWQAWIKKNAAQDKARFARRVRVLGMATALLGLIALLWRLA
Ga0209761_13358733	3300026313	Grasslands Soil	DERVWQAWIKKNEAQDKVRFARRVRVIGFVTAFLALSALLWRLT
Ga0209470_11685541	3300026324	Soil	MLQTDKNPELDERVWQAWIKKNEAQDKVRFARRLRITGLATAFLALSALLWKLT
Ga0209801_11850222	3300026326	Soil	MLQTDKNPELDERVWQAWIKKNEAQDKVRFARRLRITGLATAFLGLSALLWKLT
Ga0209266_10282804	3300026327	Soil	MLQTDKNPELDERVWQAWIKKNEAQDKVRFARRLRITGLVTALLALSALLWRLT
Ga0209803_10860331	3300026332	Soil	VNYTYAANDKSPELDERVWQAWINWIKKNAAQDRARFVRCVRVLGIVTAFLALIALLWRLAM
Ga0209378_12187052	3300026528	Soil	MPQTDKSPELDERVWQAWIKKNAAQDRARFVRRVRVLGIVTAFLGLIVLLWRLAM
Ga0209376_10397863	3300026540	Soil	MLQTDKNPELDERVWQTWIKKNEAQDKVRFARRLRITGLATAFLALSALLWKLT
Ga0209376_10554371	3300026540	Soil	MQTDKIPELDERVWQAWIKKNEAQDKIRFARRVKVVGLVTAFLLLGALLV
Ga0209156_103942632	3300026547	Soil	MVVNKDTVTQTDKQPELDEKVWQAWLAKNAAQDKVRFARRVKVIGFVAVALVLLGLLWRL
Ga0209076_12201252	3300027643	Vadose Zone Soil	MQDTNKEPQLDEHIWQAWIKKNAAQDKFRFARRVRVIGLLSAFLALSALLWRLA
Ga0209590_103277502	3300027882	Vadose Zone Soil	MQDTDKAPELDERIWQAWIKKNAAQDKFRFARRVRVIGLLSAFLALSAVLWRLA
Ga0137415_100278113	3300028536	Vadose Zone Soil	MQDTNKEPQLDERIWQAWIKKNAAQDKFRFARRVRVIGLLSALLALSAVLWRLA
Ga0308178_10339761	3300030990	Soil	IMPQIDNNPRVDEEIWQAWLQKNKAQDKFRFARRVKVIRVVSVFLALSALFWRLFR
Ga0307471_1026409171	3300032180	Hardwood Forest Soil	MVVNKDIVTQTEKQPELDEKVWQAWLAKNAAQDKVRFARRVKVIGFVAVALVLL
Ga0370546_008446_594_764	3300034681	Soil	MPQIEQNPQLDERTWQAWIEKNEARDKVRFARRVKMIGILALLLALSALLWRAYSV
Ga0370546_049911_9_188	3300034681	Soil	MAQMDDNPQLDERTWQAWIQKNEAQDKLRFARRVKVIECVSLVLALSALLWRTLVQYRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F039562

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences