Basic Information | |
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Family ID | F039619 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 163 |
Average Sequence Length | 89 residues |
Representative Sequence | MPVKIGFIGSSAPSSPHHDSFRRFIPKDLEFTFVQEAGAKTSLYDARGKVDALIGQVQELIAEHSWDGVIISGAPKEALNPGMWER |
Number of Associated Samples | 146 |
Number of Associated Scaffolds | 163 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 80.98 % |
% of genes near scaffold ends (potentially truncated) | 96.93 % |
% of genes from short scaffolds (< 2000 bps) | 92.02 % |
Associated GOLD sequencing projects | 138 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.72 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (100.000 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (11.043 % of family members) |
Environment Ontology (ENVO) | Unclassified (33.742 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (46.012 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 23.68% β-sheet: 15.79% Coil/Unstructured: 60.53% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.72 |
Powered by PDBe Molstar |
SCOP family | SCOP domain | Representative PDB | TM-score |
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c.88.1.1: Glutaminase/Asparaginase | d1o7ja_ | 1o7j | 0.69 |
c.69.1.21: alpha/beta-Hydrolases | d2b9va2 | 2b9v | 0.69 |
c.88.1.0: Glutaminase/Asparaginase | d7cbra_ | 7cbr | 0.69 |
c.88.1.1: Glutaminase/Asparaginase | d1zq1a2 | 1zq1 | 0.67 |
c.69.1.0: alpha/beta-Hydrolases | d3bdia1 | 3bdi | 0.66 |
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Pfam ID | Name | % Frequency in 163 Family Scaffolds |
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PF01361 | Tautomerase | 67.48 |
PF09489 | CbtB | 7.36 |
PF01522 | Polysacc_deac_1 | 2.45 |
PF00296 | Bac_luciferase | 1.84 |
PF05532 | CsbD | 1.23 |
PF12681 | Glyoxalase_2 | 1.23 |
PF00903 | Glyoxalase | 0.61 |
PF01068 | DNA_ligase_A_M | 0.61 |
PF01797 | Y1_Tnp | 0.61 |
PF00378 | ECH_1 | 0.61 |
COG ID | Name | Functional Category | % Frequency in 163 Family Scaffolds |
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COG1942 | Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family | Secondary metabolites biosynthesis, transport and catabolism [Q] | 67.48 |
COG0726 | Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family | Cell wall/membrane/envelope biogenesis [M] | 2.45 |
COG2141 | Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) | Coenzyme transport and metabolism [H] | 1.84 |
COG3237 | Uncharacterized conserved protein YjbJ, UPF0337 family | Function unknown [S] | 1.23 |
COG1423 | ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family | Replication, recombination and repair [L] | 0.61 |
COG1793 | ATP-dependent DNA ligase | Replication, recombination and repair [L] | 0.61 |
COG1943 | REP element-mobilizing transposase RayT | Mobilome: prophages, transposons [X] | 0.61 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 100.00 % |
Unclassified | root | N/A | 0.00 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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2209111006|2214903830 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 557 | Open in IMG/M |
3300000787|JGI11643J11755_11593328 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 545 | Open in IMG/M |
3300000953|JGI11615J12901_11181372 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 544 | Open in IMG/M |
3300002121|C687J26615_10157625 | All Organisms → cellular organisms → Bacteria | 574 | Open in IMG/M |
3300002459|JGI24751J29686_10095512 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 619 | Open in IMG/M |
3300002907|JGI25613J43889_10063038 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1015 | Open in IMG/M |
3300003324|soilH2_10033763 | All Organisms → cellular organisms → Bacteria | 3472 | Open in IMG/M |
3300003997|Ga0055466_10107462 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 765 | Open in IMG/M |
3300004009|Ga0055437_10083207 | All Organisms → cellular organisms → Bacteria | 917 | Open in IMG/M |
3300004067|Ga0055485_10225943 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 541 | Open in IMG/M |
3300004148|Ga0055521_10214104 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 540 | Open in IMG/M |
3300004156|Ga0062589_102777845 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 510 | Open in IMG/M |
3300004643|Ga0062591_100088451 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1954 | Open in IMG/M |
3300005093|Ga0062594_101696607 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 660 | Open in IMG/M |
3300005093|Ga0062594_102820424 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 540 | Open in IMG/M |
3300005171|Ga0066677_10616396 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 614 | Open in IMG/M |
3300005183|Ga0068993_10149520 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 786 | Open in IMG/M |
3300005293|Ga0065715_10015586 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 2718 | Open in IMG/M |
3300005295|Ga0065707_10568374 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 710 | Open in IMG/M |
3300005332|Ga0066388_108152129 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 523 | Open in IMG/M |
3300005335|Ga0070666_10886758 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 659 | Open in IMG/M |
3300005336|Ga0070680_100530281 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1008 | Open in IMG/M |
3300005343|Ga0070687_100175825 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1278 | Open in IMG/M |
3300005347|Ga0070668_101735504 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 573 | Open in IMG/M |
3300005356|Ga0070674_100139313 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1819 | Open in IMG/M |
3300005441|Ga0070700_100645119 | All Organisms → cellular organisms → Bacteria | 835 | Open in IMG/M |
3300005444|Ga0070694_100909074 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 727 | Open in IMG/M |
3300005456|Ga0070678_101388142 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 655 | Open in IMG/M |
3300005457|Ga0070662_100104065 | All Organisms → cellular organisms → Bacteria | 2153 | Open in IMG/M |
3300005471|Ga0070698_100564186 | All Organisms → cellular organisms → Bacteria | 1078 | Open in IMG/M |
3300005530|Ga0070679_100040448 | All Organisms → cellular organisms → Bacteria | 4637 | Open in IMG/M |
3300005536|Ga0070697_100267143 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1466 | Open in IMG/M |
3300005536|Ga0070697_100800080 | All Organisms → cellular organisms → Bacteria | 834 | Open in IMG/M |
3300005539|Ga0068853_101985322 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens | 564 | Open in IMG/M |
3300005544|Ga0070686_100670431 | All Organisms → cellular organisms → Bacteria | 824 | Open in IMG/M |
3300005568|Ga0066703_10827730 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 529 | Open in IMG/M |
3300005576|Ga0066708_10381419 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 905 | Open in IMG/M |
3300005577|Ga0068857_102236640 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 537 | Open in IMG/M |
3300005718|Ga0068866_10372717 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 913 | Open in IMG/M |
3300005829|Ga0074479_10408066 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 564 | Open in IMG/M |
3300005840|Ga0068870_10864359 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 636 | Open in IMG/M |
3300006049|Ga0075417_10391136 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 686 | Open in IMG/M |
3300006049|Ga0075417_10626017 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 549 | Open in IMG/M |
3300006573|Ga0074055_10221407 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 515 | Open in IMG/M |
3300006845|Ga0075421_100683538 | All Organisms → cellular organisms → Bacteria | 1195 | Open in IMG/M |
3300006845|Ga0075421_101588453 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 712 | Open in IMG/M |
3300006845|Ga0075421_102574862 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 528 | Open in IMG/M |
3300006846|Ga0075430_101196324 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 626 | Open in IMG/M |
3300006847|Ga0075431_100647196 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1038 | Open in IMG/M |
3300006871|Ga0075434_100023632 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 5993 | Open in IMG/M |
3300006894|Ga0079215_10914631 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 631 | Open in IMG/M |
3300006904|Ga0075424_100026758 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 5946 | Open in IMG/M |
3300009053|Ga0105095_10500652 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 674 | Open in IMG/M |
3300009087|Ga0105107_10620488 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 753 | Open in IMG/M |
3300009094|Ga0111539_10593806 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1289 | Open in IMG/M |
3300009100|Ga0075418_12252247 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 594 | Open in IMG/M |
3300009147|Ga0114129_10195834 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 2740 | Open in IMG/M |
3300009147|Ga0114129_10858105 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1154 | Open in IMG/M |
3300009162|Ga0075423_10027075 | All Organisms → cellular organisms → Bacteria | 5760 | Open in IMG/M |
3300009162|Ga0075423_10385322 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1471 | Open in IMG/M |
3300009162|Ga0075423_11429131 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 741 | Open in IMG/M |
3300009171|Ga0105101_10585631 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 553 | Open in IMG/M |
3300010362|Ga0126377_11377992 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 778 | Open in IMG/M |
3300010400|Ga0134122_10139807 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1958 | Open in IMG/M |
3300010400|Ga0134122_13229099 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 511 | Open in IMG/M |
3300010401|Ga0134121_11247929 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 746 | Open in IMG/M |
3300011427|Ga0137448_1019524 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1548 | Open in IMG/M |
3300011434|Ga0137464_1028523 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1512 | Open in IMG/M |
3300011442|Ga0137437_1007079 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 3939 | Open in IMG/M |
3300012041|Ga0137430_1067156 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 987 | Open in IMG/M |
3300012096|Ga0137389_11432586 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 586 | Open in IMG/M |
3300012172|Ga0137320_1060865 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 789 | Open in IMG/M |
3300012200|Ga0137382_10324199 | All Organisms → cellular organisms → Bacteria | 1078 | Open in IMG/M |
3300012204|Ga0137374_10450987 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1010 | Open in IMG/M |
3300012204|Ga0137374_11197346 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 532 | Open in IMG/M |
3300012206|Ga0137380_10499508 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1072 | Open in IMG/M |
3300012228|Ga0137459_1155491 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 673 | Open in IMG/M |
3300012361|Ga0137360_10725716 | All Organisms → cellular organisms → Bacteria | 854 | Open in IMG/M |
3300012488|Ga0157343_1033862 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 527 | Open in IMG/M |
3300012501|Ga0157351_1000515 | All Organisms → cellular organisms → Bacteria | 2106 | Open in IMG/M |
3300012510|Ga0157316_1083726 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 504 | Open in IMG/M |
3300012532|Ga0137373_11277396 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 513 | Open in IMG/M |
3300012882|Ga0157304_1074064 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 573 | Open in IMG/M |
3300012924|Ga0137413_10170051 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1442 | Open in IMG/M |
3300012976|Ga0134076_10361422 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 640 | Open in IMG/M |
3300013297|Ga0157378_12149871 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 609 | Open in IMG/M |
3300014272|Ga0075327_1274706 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 555 | Open in IMG/M |
3300014296|Ga0075344_1020481 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1019 | Open in IMG/M |
3300014324|Ga0075352_1193836 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 597 | Open in IMG/M |
3300014326|Ga0157380_12093859 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 629 | Open in IMG/M |
3300015372|Ga0132256_101267985 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 850 | Open in IMG/M |
3300015372|Ga0132256_103209036 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 550 | Open in IMG/M |
3300015373|Ga0132257_103584830 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 565 | Open in IMG/M |
3300015374|Ga0132255_100002000 | All Organisms → cellular organisms → Bacteria | 21549 | Open in IMG/M |
3300015374|Ga0132255_101476507 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1028 | Open in IMG/M |
3300016341|Ga0182035_10214560 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1532 | Open in IMG/M |
3300016404|Ga0182037_10170002 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1663 | Open in IMG/M |
3300018028|Ga0184608_10261071 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 762 | Open in IMG/M |
3300018052|Ga0184638_1317869 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 524 | Open in IMG/M |
3300018053|Ga0184626_10080085 | All Organisms → cellular organisms → Bacteria | 1379 | Open in IMG/M |
3300018053|Ga0184626_10225830 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 789 | Open in IMG/M |
3300018053|Ga0184626_10292764 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 677 | Open in IMG/M |
3300018056|Ga0184623_10484603 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 530 | Open in IMG/M |
3300018064|Ga0187773_10555827 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 694 | Open in IMG/M |
3300018083|Ga0184628_10055969 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1995 | Open in IMG/M |
3300018084|Ga0184629_10360611 | All Organisms → cellular organisms → Bacteria | 765 | Open in IMG/M |
3300018422|Ga0190265_13433098 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 528 | Open in IMG/M |
3300018465|Ga0190269_10620319 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 736 | Open in IMG/M |
3300018481|Ga0190271_10341295 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1575 | Open in IMG/M |
3300019377|Ga0190264_10654615 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 764 | Open in IMG/M |
3300019884|Ga0193741_1099070 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 746 | Open in IMG/M |
3300019886|Ga0193727_1050858 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1338 | Open in IMG/M |
3300020010|Ga0193749_1023701 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1199 | Open in IMG/M |
3300020200|Ga0194121_10073811 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 2400 | Open in IMG/M |
3300025160|Ga0209109_10064616 | All Organisms → cellular organisms → Bacteria | 1922 | Open in IMG/M |
3300025311|Ga0209343_10589744 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 670 | Open in IMG/M |
3300025314|Ga0209323_10450335 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 764 | Open in IMG/M |
3300025315|Ga0207697_10154755 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 998 | Open in IMG/M |
3300025318|Ga0209519_10545633 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 645 | Open in IMG/M |
3300025903|Ga0207680_10851614 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 654 | Open in IMG/M |
3300025904|Ga0207647_10114778 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1591 | Open in IMG/M |
3300025920|Ga0207649_11566636 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 521 | Open in IMG/M |
3300025931|Ga0207644_10107961 | All Organisms → cellular organisms → Bacteria | 2100 | Open in IMG/M |
3300025933|Ga0207706_10944597 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 727 | Open in IMG/M |
3300025933|Ga0207706_11010502 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 698 | Open in IMG/M |
3300025937|Ga0207669_10257561 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1303 | Open in IMG/M |
3300026025|Ga0208778_1034793 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 513 | Open in IMG/M |
3300026053|Ga0208422_1017125 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 849 | Open in IMG/M |
3300026075|Ga0207708_10967990 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 738 | Open in IMG/M |
3300026089|Ga0207648_11382284 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 662 | Open in IMG/M |
3300026324|Ga0209470_1140465 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1065 | Open in IMG/M |
3300026943|Ga0207486_1017131 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 549 | Open in IMG/M |
3300027650|Ga0256866_1121181 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 708 | Open in IMG/M |
3300027665|Ga0209983_1127650 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 581 | Open in IMG/M |
3300027682|Ga0209971_1045621 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1057 | Open in IMG/M |
3300027695|Ga0209966_1111508 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 623 | Open in IMG/M |
3300027787|Ga0209074_10086251 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1036 | Open in IMG/M |
3300027818|Ga0209706_10293160 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 772 | Open in IMG/M |
3300027880|Ga0209481_10224126 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 943 | Open in IMG/M |
3300027890|Ga0209496_10519598 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 635 | Open in IMG/M |
3300027909|Ga0209382_10260083 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1968 | Open in IMG/M |
3300027964|Ga0256864_1242804 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 516 | Open in IMG/M |
3300028809|Ga0247824_10661981 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 633 | Open in IMG/M |
3300028828|Ga0307312_10967928 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 564 | Open in IMG/M |
3300030606|Ga0299906_10278234 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1311 | Open in IMG/M |
(restricted) 3300031197|Ga0255310_10153540 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 633 | Open in IMG/M |
3300031198|Ga0307500_10094656 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 794 | Open in IMG/M |
3300031538|Ga0310888_10769636 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 595 | Open in IMG/M |
3300031547|Ga0310887_10491469 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 738 | Open in IMG/M |
3300031854|Ga0310904_10827125 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 650 | Open in IMG/M |
3300031854|Ga0310904_11290616 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 529 | Open in IMG/M |
3300031901|Ga0307406_11154057 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 671 | Open in IMG/M |
3300031954|Ga0306926_10374744 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1759 | Open in IMG/M |
3300032001|Ga0306922_10328728 | All Organisms → cellular organisms → Bacteria | 1641 | Open in IMG/M |
3300032005|Ga0307411_11498952 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 620 | Open in IMG/M |
3300032075|Ga0310890_11052213 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 657 | Open in IMG/M |
3300032075|Ga0310890_11115451 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 639 | Open in IMG/M |
3300033004|Ga0335084_12074190 | All Organisms → cellular organisms → Bacteria | 553 | Open in IMG/M |
3300033408|Ga0316605_10720652 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 943 | Open in IMG/M |
3300033513|Ga0316628_100396348 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1753 | Open in IMG/M |
3300033815|Ga0364946_128973 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 576 | Open in IMG/M |
3300034147|Ga0364925_0057422 | All Organisms → cellular organisms → Bacteria | 1332 | Open in IMG/M |
3300034150|Ga0364933_063700 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 917 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
⦗Top⦘ |
Habitat | Taxonomy | Distribution |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 11.04% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 7.98% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 4.29% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 4.91% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 4.91% |
Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 3.68% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 3.68% |
Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 3.07% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 3.07% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 3.07% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment | 2.45% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 2.45% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.45% |
Natural And Restored Wetlands | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands | 2.45% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 2.45% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 2.45% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 2.45% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.84% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 1.84% |
Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 1.84% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.84% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 1.84% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 1.84% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 1.23% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 1.23% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 1.23% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere | 1.23% |
Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 1.23% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 1.23% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 1.23% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 1.23% |
Wetland | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland | 0.61% |
Freshwater Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake | 0.61% |
Groundwater | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater | 0.61% |
Sediment (Intertidal) | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal) | 0.61% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 0.61% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 0.61% |
Unplanted Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil | 0.61% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.61% |
Sugarcane Root And Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil | 0.61% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.61% |
Rice Paddy Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil | 0.61% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 0.61% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.61% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.61% |
Soil | Environmental → Terrestrial → Soil → Loam → Unclassified → Soil | 0.61% |
Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 0.61% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.61% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 0.61% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.61% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.61% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
2209111006 | Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0 | Host-Associated | Open in IMG/M |
3300000787 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
3300000953 | Soil microbial communities from Great Prairies - Kansas Corn soil | Environmental | Open in IMG/M |
3300002121 | Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 | Environmental | Open in IMG/M |
3300002459 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 | Host-Associated | Open in IMG/M |
3300002907 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm | Environmental | Open in IMG/M |
3300003324 | Sugarcane bulk soil Sample H2 | Environmental | Open in IMG/M |
3300003997 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 | Environmental | Open in IMG/M |
3300004009 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2 | Environmental | Open in IMG/M |
3300004067 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2 | Environmental | Open in IMG/M |
3300004148 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqA_D2 | Environmental | Open in IMG/M |
3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
3300004643 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3 | Environmental | Open in IMG/M |
3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
3300005171 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 | Environmental | Open in IMG/M |
3300005183 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 | Environmental | Open in IMG/M |
3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 | Host-Associated | Open in IMG/M |
3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 | Environmental | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Environmental | Open in IMG/M |
3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Host-Associated | Open in IMG/M |
3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Host-Associated | Open in IMG/M |
3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Environmental | Open in IMG/M |
3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Host-Associated | Open in IMG/M |
3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Environmental | Open in IMG/M |
3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Environmental | Open in IMG/M |
3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Host-Associated | Open in IMG/M |
3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Environmental | Open in IMG/M |
3300005568 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 | Environmental | Open in IMG/M |
3300005576 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 | Environmental | Open in IMG/M |
3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Host-Associated | Open in IMG/M |
3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Host-Associated | Open in IMG/M |
3300005829 | Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC | Environmental | Open in IMG/M |
3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Host-Associated | Open in IMG/M |
3300006049 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 | Host-Associated | Open in IMG/M |
3300006573 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
3300006846 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Host-Associated | Open in IMG/M |
3300006847 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Host-Associated | Open in IMG/M |
3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
3300006894 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control | Environmental | Open in IMG/M |
3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
3300009053 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 | Environmental | Open in IMG/M |
3300009087 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 | Environmental | Open in IMG/M |
3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
3300009171 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015 | Environmental | Open in IMG/M |
3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
3300010401 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1 | Environmental | Open in IMG/M |
3300011427 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2 | Environmental | Open in IMG/M |
3300011434 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2 | Environmental | Open in IMG/M |
3300011442 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2 | Environmental | Open in IMG/M |
3300012041 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2 | Environmental | Open in IMG/M |
3300012096 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG | Environmental | Open in IMG/M |
3300012172 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT366_2 | Environmental | Open in IMG/M |
3300012200 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG | Environmental | Open in IMG/M |
3300012204 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG | Environmental | Open in IMG/M |
3300012206 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG | Environmental | Open in IMG/M |
3300012228 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2 | Environmental | Open in IMG/M |
3300012361 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG | Environmental | Open in IMG/M |
3300012488 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.yng.030610 | Host-Associated | Open in IMG/M |
3300012501 | Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610 | Environmental | Open in IMG/M |
3300012510 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610 | Host-Associated | Open in IMG/M |
3300012532 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG | Environmental | Open in IMG/M |
3300012882 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 | Environmental | Open in IMG/M |
3300012924 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012976 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG | Environmental | Open in IMG/M |
3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
3300014272 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1 | Environmental | Open in IMG/M |
3300014296 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D1 | Environmental | Open in IMG/M |
3300014324 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1 | Environmental | Open in IMG/M |
3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300016341 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 | Environmental | Open in IMG/M |
3300016404 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 | Environmental | Open in IMG/M |
3300018028 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex | Environmental | Open in IMG/M |
3300018052 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2 | Environmental | Open in IMG/M |
3300018053 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1 | Environmental | Open in IMG/M |
3300018056 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1 | Environmental | Open in IMG/M |
3300018064 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG | Environmental | Open in IMG/M |
3300018083 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1 | Environmental | Open in IMG/M |
3300018084 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1 | Environmental | Open in IMG/M |
3300018422 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T | Environmental | Open in IMG/M |
3300018465 | Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS | Environmental | Open in IMG/M |
3300018481 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T | Environmental | Open in IMG/M |
3300019377 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T | Environmental | Open in IMG/M |
3300019884 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2 | Environmental | Open in IMG/M |
3300019886 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2 | Environmental | Open in IMG/M |
3300020010 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2 | Environmental | Open in IMG/M |
3300020200 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015020 Mahale Deep Cast 50m | Environmental | Open in IMG/M |
3300025160 | Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2 | Environmental | Open in IMG/M |
3300025311 | Groundwater microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_0.2 (SPAdes) | Environmental | Open in IMG/M |
3300025314 | Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 2 | Environmental | Open in IMG/M |
3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Host-Associated | Open in IMG/M |
3300025318 | Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1 | Environmental | Open in IMG/M |
3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026025 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes) | Environmental | Open in IMG/M |
3300026053 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1 (SPAdes) | Environmental | Open in IMG/M |
3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026324 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes) | Environmental | Open in IMG/M |
3300026943 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A3-10 (SPAdes) | Environmental | Open in IMG/M |
3300027650 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq | Environmental | Open in IMG/M |
3300027665 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) | Host-Associated | Open in IMG/M |
3300027682 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) | Host-Associated | Open in IMG/M |
3300027695 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) | Host-Associated | Open in IMG/M |
3300027787 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes) | Environmental | Open in IMG/M |
3300027818 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes) | Environmental | Open in IMG/M |
3300027880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes) | Host-Associated | Open in IMG/M |
3300027890 | Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes) | Environmental | Open in IMG/M |
3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
3300027964 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111 HiSeq | Environmental | Open in IMG/M |
3300028809 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48 | Environmental | Open in IMG/M |
3300028828 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202 | Environmental | Open in IMG/M |
3300030606 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125 | Environmental | Open in IMG/M |
3300031197 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1 | Environmental | Open in IMG/M |
3300031198 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S | Environmental | Open in IMG/M |
3300031538 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1 | Environmental | Open in IMG/M |
3300031547 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4 | Environmental | Open in IMG/M |
3300031854 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1 | Environmental | Open in IMG/M |
3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Host-Associated | Open in IMG/M |
3300031954 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2) | Environmental | Open in IMG/M |
3300032001 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2) | Environmental | Open in IMG/M |
3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Host-Associated | Open in IMG/M |
3300032075 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3 | Environmental | Open in IMG/M |
3300033004 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4 | Environmental | Open in IMG/M |
3300033408 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT | Environmental | Open in IMG/M |
3300033513 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C | Environmental | Open in IMG/M |
3300033815 | Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17 | Environmental | Open in IMG/M |
3300034147 | Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17 | Environmental | Open in IMG/M |
3300034150 | Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
2213960858 | 2209111006 | Arabidopsis Rhizosphere | MPTKIGFIGSSAPSSPHHDSFRAFIPRDISFSFVQETRIKGSLYDARGKLDTLISEVKELSGQQGWNGIIISGAPKEALNPGMWQ |
JGI11643J11755_115933282 | 3300000787 | Soil | MSHTPSLKIGFIGSSSPASPHHESFKAFIPRDVELTFVQEAGAKNSLYDARGKVDALIGQVQKLVVERGWHGVIISGA |
JGI11615J12901_111813721 | 3300000953 | Soil | MALKIGFIGSSAASSPHHDSFRALIPKDISFSFVQETGVKTSLYDARGKVDALIAQAEELIRANDWDGIVIS |
C687J26615_101576252 | 3300002121 | Soil | MAKAKIGFLGSSSPSSPHHDSFRAFIPKDIEFTFVEEAGADGSLWSAKGKLDALIRQSRELIEQNKWDGL |
JGI24751J29686_100955121 | 3300002459 | Corn, Switchgrass And Miscanthus Rhizosphere | MPIKIGFLGSSAPSSPHHDSFRAFIPKDIVFTFAQETGDKTSLYDARGKIAPLIAQAKELLRENAWDGLIISGAPKE |
JGI25613J43889_100630381 | 3300002907 | Grasslands Soil | MSAIEPVKIGFLGSSAPSSPHHASFKAFIPNDIDFTFTQESGAKTSLYDAKGKVDALVEQSRALINQHGWNGLIISGAPKEALNPGMWEEVSTSLDVPVALALR |
soilH2_100337635 | 3300003324 | Sugarcane Root And Bulk Soil | MAAKIGFIGSSAPQSPHHESFKRFIPREIDFEFVQEKGAKTSLYDAQGKVDALIAQADAWIEQRRWDGLIVSGAPKEALNPGMWERVC |
Ga0055466_101074623 | 3300003997 | Natural And Restored Wetlands | MAHKIGFIGSSAPSSPHHDSFRRFIPKNLEFSFVQEAGAKSSLYDARGKVDALIAQVQELVDAHSWDGVIISGAPKEALNPGMWEKVS |
Ga0055437_100832073 | 3300004009 | Natural And Restored Wetlands | MSVPARLKIGFLGSSPASSPHHASFKKFIPGDIDFTFVQESGEKTSLYDAKGKVGALIAQSRQLIAKHGWNGLIISGGPKEALNPNMWAEVSTAI |
Ga0055485_102259432 | 3300004067 | Natural And Restored Wetlands | MTQTVPIKIGFLGSSAPSSPHHASFKQFIPRDIDFTFVQESGEKTSLYDAQGKVDALIEQSRQLIAANGWSGLIISGAPKE |
Ga0055521_102141041 | 3300004148 | Natural And Restored Wetlands | MSQTPTTKIGFLGSSAPSSPHHASFKKFIPNDIDFTFMQESGEKTSLYDAQGKVKALIEQSRQLIAANGWNGLIISGAPKEALNRGMWEEVSEALNLPVALALRS |
Ga0062589_1027778451 | 3300004156 | Soil | MTQTRPVKIGFLGSSAPSSPHHASFKTFIPPDIDFTFMQESGTHTSLYDAQGKVDALIEQARQLIAANGWHGLIISGGPKE |
Ga0062591_1000884514 | 3300004643 | Soil | MTQTRPVKIGFLGSSAPSSPHHASFKTFIPPDIDFTFMQESGTHTSLYDAQGKVDALIEQARQLIAANGWHGLIISGGPKEALNPVMWEQVSSAL |
Ga0062594_1016966071 | 3300005093 | Soil | MPTKIGFIGSSAPSSPHHDSFRAFLPRDISFSFVQETGIKGSLYDARGKLDTLISEVKELSGQQGWNGIIISGAPKEALNPGMWQRVVAKIEKPVALALRS |
Ga0062594_1028204241 | 3300005093 | Soil | MADSTRTKIGFLGSSAASSPHHGSFKKFIPDDIDFTFVQESGANTSLYNAKGKVDALIDQSQQLIAAHGWNGLIISGAPKEAL |
Ga0066677_106163961 | 3300005171 | Soil | MPIKIGFIGSSAPSSPHHDSFRRFIPKDLEFTFVQEAGAKTSLYDARGKVDALIGQVQELIAEHSWDGVIISGA |
Ga0068993_101495201 | 3300005183 | Natural And Restored Wetlands | MAQTASTKIGFLGSSAPSSPHHASFKKFIPDDVDITFMQESGTHSSLYDAKGKVDALIGQSKVLISGHRWNGLIISGAPKEALNAGM |
Ga0065715_100155861 | 3300005293 | Miscanthus Rhizosphere | MPIKIGFLGSSAPSSPHHDSFRAFIPKDIVFTFAQETGDKTSLYDARGKIAPLIAQAKELIRENAWDGLIISGAPKEALNSGMWQR |
Ga0065707_105683741 | 3300005295 | Switchgrass Rhizosphere | MAPAIKTKVGFIGNSEPSSPHHESFKTFIPKDIEFTIVQEAGARTSLYDARGKVDSLIGQVKDLVQQHHWDGVIISGAPKEALNPGMWERVSSELEVPVSLALRSSVA |
Ga0066388_1081521292 | 3300005332 | Tropical Forest Soil | MPLKVGFIGSSAASSPHHDSFRAFIPKDISFNFVQETGVKSTLYDARGKVDALIAQAKELIRENAWDGIIISGAP |
Ga0070666_108867581 | 3300005335 | Switchgrass Rhizosphere | MATKIGFIGSSAPSSPHHDSFRAFIPRDISFSFVQETAIKGSLYDARGKLDTLISEVKELIRQHDWNGVIISGAPKEALNRGMWQRVIAEIEKPVALA |
Ga0070680_1005302811 | 3300005336 | Corn Rhizosphere | MPSHVQNKIGFIGSSAPASPHHDSFRAFIPKDIEFTFVQEAGEKSSLYDARGKVEPLIGQVRRLITERRWDGVIISGA |
Ga0070687_1001758251 | 3300005343 | Switchgrass Rhizosphere | MPIKIGFLGSSAPSSPHHDSFRAFIPKEIVFTFAQETGDKTSLYDARGKIAPLIAQAKELIRENAWDGLIISGAPKEALDSGMWQRVVEEIKEPVALALRSSVAALK |
Ga0070668_1017355042 | 3300005347 | Switchgrass Rhizosphere | MPTKIGFIGSSAPSSPHHDSFRAFLPRDISFSFVQETGIKGSLYDARGKLDTLISEVKELSGQQGWNGIIISGAPKEALNPGMWQRVVAKIEKPVALALRSSVAALK |
Ga0070674_1001393133 | 3300005356 | Miscanthus Rhizosphere | MPIKIGFLGSSAPSSPHHDSFRAFIPKEIVFTFAQETGDKTSLYDARGKIAPLIAQAKELIRENAWDGLIISGAPKEALDSGMWQRV |
Ga0070700_1006451191 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | MASHGQNKIGFIGSSAPASPHHDSFRAFIPKDIEFTFVQEAGEKSSLYDARGKVEPLIGQVRRLITERRWDGVIISGAPKEALNPGMWEQVSA |
Ga0070694_1009090741 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | MPPATRTKIGFIVSSSPASPHHDSFRAFIPNDIDFTFVQESGEKTSLYDARGKVDALIAQVKGLVAEHGWNGV |
Ga0070678_1013881422 | 3300005456 | Miscanthus Rhizosphere | MPIKIGFLGSSAPSSPHHDSFRAFIPKEIVFTFAQETGDKTSLYDARGKIAPLIAQAKELIRENAWDGLIISGAPKEALNSGMWQRVVEQIKEP |
Ga0070662_1001040653 | 3300005457 | Corn Rhizosphere | MPTKIGFIGSSAPSSPHHDSFRAFLPRDISFSFVQETGIKGSLYDARGKLDTLISEVKELSGQQGWNGIIISGAPKEALNPGMWQRVVAKIEKPVALALRSSVAALKAFRAKNI |
Ga0070698_1005641863 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | MIKARIGFIGSSAPASPHHESFKAFIPNDIDFAIVQEAGPKTSLYDARGKVDPLIHQVRDLIEQQHWDGVIISGAPKEALNPGMW |
Ga0070679_1000404486 | 3300005530 | Corn Rhizosphere | MPIKIGFLGSSAPSSPHHDSFRAFIPKDIVFTFAQETGDKTSLYDARGKIAPLIAQAKELIRENAWDGLI |
Ga0070697_1002671431 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | MPSHGQNKIGFIGSSAPASPHHDSFRAFIPKDIEFTFVQEAGEKSSLYDARGKVEPLIGQVQRLITERRW |
Ga0070697_1008000801 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | MPVKIGFIGSSAPSSPHHDSFRRFIPKDLEFTFVQEAGAKTSLYDARGKVDALIGQVQELIAEHSWDGVIIS |
Ga0068853_1019853221 | 3300005539 | Corn Rhizosphere | MPTKIGFIGSSAPSSPHHDSFRAFLPRDISFSFVQETGIKGSLYDARGKLDTLISEVKELSGQQGWNGIIISGAPKEALNPGMWQRVVAKIEKPVALAL |
Ga0070686_1006704313 | 3300005544 | Switchgrass Rhizosphere | MPSHGQNKIGFIGSSAPASPHHDSFRAFIPKDIEFTFVQEAGEKSSLYDARGKVEPLIGQVRRLITERRWDGVIISGAPKEALNPGMWEQVSAALDIPIALALR |
Ga0066703_108277302 | 3300005568 | Soil | MPIKIGFIGSSAPSSPHHDSFRRFIPKDLEFTFVQEAGAKTSLYDSRGKVDALIGQVQELIAEHSWDGVIISGAPKEALNPGM |
Ga0066708_103814191 | 3300005576 | Soil | MPIKIGFIGSSAPSSPHHDSFRQFIPKDLEFTFVQEAGAKTSLYDSRGKVDALIGQVQELIAEHSWDGVIISGAPKEALNP |
Ga0068857_1022366401 | 3300005577 | Corn Rhizosphere | MTQTRPVKIGFLGSSAPSSPHHASFKTFIPPDIDFTFMQESGTHTSLYDAQGKVDALIEQARQLIAANGWHGLIISGGPKEALNPGMW |
Ga0068866_103727172 | 3300005718 | Miscanthus Rhizosphere | MTTSIKLGFLGSSAPSSPHHASFKKFIPADVDVAFTQERGGSTSLYDAKGKVAALIEQANALIAESAWQGLIISGGPKEALNPGMWEEVSQAIRVPVALALRSSVA |
Ga0074479_104080662 | 3300005829 | Sediment (Intertidal) | MTQNTPIKIGFLGSSAPSSPHHASFKKFIPGDIDFSFMQESGEKTSLYNAQGKVVPLIEQSRQLIETNSWNGLIISGAPKEALNPGMWEQV |
Ga0068870_108643593 | 3300005840 | Miscanthus Rhizosphere | MPIKIGFLGSSAPSSPHHDSFRAFIPKDIVFTFAQETGDKTSLYDARGKIAPLIAQAKELLRENAWDGLIISGAPKEALNSGMWQR |
Ga0075417_103911361 | 3300006049 | Populus Rhizosphere | MPPAIKTKVGFIGNSAPSSPHHESFKAFIPKDIEFTIVQEAGARTSLYDARGKVDSLIGQVKDLVQQHDWDGVIIS |
Ga0075417_106260171 | 3300006049 | Populus Rhizosphere | MPVKIGFLGSSAPSSPHHDSFRRFIPKDLEFTFVREGGVKTSLYDARGKVDALIGQVQELIAEQSWDGVIISGAPKEALNP |
Ga0074055_102214071 | 3300006573 | Soil | MREKAKIGFIGSSAPSSPHHESFKAFIPKEVDFTFAQEEGAGGSLYDARGKVDSLVGQTVGLVEKHGWDGVIISGGPREVLNP |
Ga0075421_1006835384 | 3300006845 | Populus Rhizosphere | MALKIGFIGSSAASSPHHDSFRALIPKDISFSFLQETGVKTSLYDARGKVDALIAQAEELIRANGWDGIIISGAPKE |
Ga0075421_1015884533 | 3300006845 | Populus Rhizosphere | MADSTRTKIGFLGSSAASSPHHTSFKKFIPDNVDFTFVQELGANSSLYNAKGKVDALIDQSQQLIAAHGWNGLIISGAPKEALNAGMWEQVSA |
Ga0075421_1025748621 | 3300006845 | Populus Rhizosphere | MREKVKIGFIGSSAPSSPHHESFKAFIPKDIDFTFVQEEGAGESLYDARGKVDSLVGQTAGLVEKHGWDGVIISGGPREVLNPGLWG |
Ga0075430_1011963241 | 3300006846 | Populus Rhizosphere | MADVTRTKIGFLGSSAASSPHHTSFKNFIPDDIDFTFVQELGANSSLYNAKGKVDALIDQSQQLIAAHGWNGLIISGA |
Ga0075431_1006471961 | 3300006847 | Populus Rhizosphere | VTKAKIGFIGSSAPASPHHDSFKAFIPADIDFTFVQESGSGGSLWDARDKLDGLLQQSRELIDRHEWNGLIISGAPKEVLNADMTARLAAVLQVPVATALRSACAALKTFAAKRILLMTPVDD |
Ga0075434_1000236321 | 3300006871 | Populus Rhizosphere | MSLKIGFIGSSAASSPHHESFRAFIPKDISFNFLQETGVKTSLYDARGKVDALIAQAKELIRENGWDGIIISGAPKEALNPGMWQRAVE |
Ga0079215_109146311 | 3300006894 | Agricultural Soil | VSRAKIGFIGSSAPSSPHHDSFKAFIPADIDFTFVREAGAGDSLWDARDKLDALLEQSRKLIMQNHWDALIISGAPKEVLNANMTARLAAELPIPVATALRSSCAALKVFAARRI |
Ga0075424_1000267581 | 3300006904 | Populus Rhizosphere | MSLKIGFIGSSAASSPHHESFRAFIPKDISFNFLQETGVKTSLYDARGKVDALIAQAKELIRENGWDGIII |
Ga0105095_105006522 | 3300009053 | Freshwater Sediment | MSQTTPIKIGFLGSSAPSSPHHASFKKFIPADIDFTFFQESGTHTSLYDAQGKVDALIEQSRQLIATNGWHGLILSGAPKEAL |
Ga0105107_106204881 | 3300009087 | Freshwater Sediment | MAPSAPTKIGFIGSSAPSSPHHDSFRAFISKDLDFIFVQEAGEKTSLYDARGKVDALIGQVRELIAELAWDGVIISGAPKEALNPGMWE |
Ga0111539_105938064 | 3300009094 | Populus Rhizosphere | MPLKIGFIGSSAASSPHHDSFRALIPKDISFTFVQETGVKTSLYDARGKVDAVIAQAKELIRENGWDGIIISGAPKEALNPGMWQRAVEGIKSRWRSRFDLRLRP* |
Ga0075418_122522471 | 3300009100 | Populus Rhizosphere | MADSTRTKIGFLGSSAASSPHHTSFKKFIPDNVDFTFVQELGANSSLYNAKGKVDALIDQSQQLIAAHGWNGLIIS |
Ga0114129_101958341 | 3300009147 | Populus Rhizosphere | MADATRTKIGFLGASAASSPHHTSFKTFIPDDVDFTFVQESGVNSSLYNAKGKVDALIAQSQELIAERGWNGLIISGAPKEALNAGMWEQVSAALPIPVALALRSSVAA |
Ga0114129_108581053 | 3300009147 | Populus Rhizosphere | MPPAIKTKVGFIGNSAPSSPHHESFKAFIPKDIEFTIVQEAGARTSLYDARGKVDSLIGQVKDLVQQHHWDGVIISGAPKEALNP |
Ga0075423_100270751 | 3300009162 | Populus Rhizosphere | MPLKIGFIGSSAASSPHHDSFRALIPKDISFTFVQETGVKTSLYDARGKVDAVIAQAKELIRENGWDGIIISGAPKEALNPGMWQRAVEQIKNPLALALR |
Ga0075423_103853224 | 3300009162 | Populus Rhizosphere | MSLKIGFIGSSAASSPHHESFRAFIPKDISFNFVQETGVKTSLYDARGKVDALIVQAKELIRENGWDGIIISGAPKEALNPGMWQRAVE |
Ga0075423_114291311 | 3300009162 | Populus Rhizosphere | MALKIGFIGSSAASSPHHDSFRALIPKDILFSFVQETGVKTSLYDARGKVDALIAQAKELIRENGWDGIIISGAPKEALNPGMWQRAVEQIKNPLALALR |
Ga0105101_105856311 | 3300009171 | Freshwater Sediment | MSKTAPMKIGFLGSSAPSSPHHASFKKFIPADIDFTFMQESGTHTSLYDAQGKVDALIEQSRQLIATNGWQGLILSGAPKEALNPGMWEQVTTA |
Ga0126377_113779921 | 3300010362 | Tropical Forest Soil | MPATKIGFVGSSAPASPHHESFKAFIPKDVDFTIVQEAGPKTSLYDARGRVDPLIQQVRELIAQQGWHGVIISGAPKEALNPGMWQRVSKELPVPVS |
Ga0134122_101398075 | 3300010400 | Terrestrial Soil | VTSSKPEKRMPIKIGFLGSSAPSSPHHDSFRALIPKEIVFTFAQETGDKTSLYDARGKIVPLITQAKELIRENAWDGLIISGAPKEALNSGMWQ |
Ga0134122_132290991 | 3300010400 | Terrestrial Soil | MPSHVQNKIGFIGSSAPASPHHDSFRAFIPKDIEFTFVQEAGEKSSLYDARGKVEPLIGQVRRLITERRWDG |
Ga0134121_112479292 | 3300010401 | Terrestrial Soil | MTTSIKLGFLGSSAPSSPHHASFKKFIPADVDVAFTQERGGSTSLYDAKGKVAALIEQANALIAESAWQGLIISGGPKEALNPGMWEEVSQAIRV |
Ga0137448_10195241 | 3300011427 | Soil | MSQPNPIKIGFLGSSAPTSPHHASFKKFIPNDIEFTFLQESGTHTSLYDAKGKVGALIGEAIQLAEQRGWHGVIISGAPKEALNPGMWDEVAAALKIPFSLALRSSVA |
Ga0137464_10285231 | 3300011434 | Soil | MAEVARTKIGFLGSSAASSPHHASFKKFIPANIDFTFMQESGTHSSLYDAKGKVDALIAVSKELIAERGRNGLIISGAPKEALNPGM* |
Ga0137437_10070794 | 3300011442 | Soil | MVEAARTKIGFLGSSAASSPHHASFKKFIPANIDFTFMQESGTHSSLYDAKGKVDALIAESKELIAERGWNGLIISGAPKEALNPGM* |
Ga0137430_10671561 | 3300012041 | Soil | MAEAARTKIGFLGSSAASSPHHASFTKFIPADVDFTFMQESGTHSSLYDAKGKVDALIAESKELIAERGWNGLIISGAPKE |
Ga0137389_114325862 | 3300012096 | Vadose Zone Soil | MSQTPRAKIGFIGSSAPSSPHHESFRAFIPKDIDFTFVQEAGGNASGDDDPGKLDALVSQTVELVAQNKWDGVIISGAPK |
Ga0137320_10608652 | 3300012172 | Soil | MTQTGPIKIGFLGSSAPSSPHHASFKKFIPSDIDFTFMQESGEKTSLYDAQGKVDALIEQSRQLIETNGWKGLIISGAPKEALNPGMWEQV |
Ga0137382_103241993 | 3300012200 | Vadose Zone Soil | MPIKIGFIGSSAPSSPHHDSFRQFIPKDLEFTFVQEAGAKTSLYDSRGKVDALIGQVQELIAEHSWDGVIIS |
Ga0137374_104509874 | 3300012204 | Vadose Zone Soil | MLPAIKIKVGFIGNSAPSSPHHESFKAFIPEDIEFTIVREAGARTSLYDARGKVDSLIGQVKDLVQQHHWDGVIISGAP |
Ga0137374_111973462 | 3300012204 | Vadose Zone Soil | MPPAIKTKVGFIGNSAPSSPHHESFEAFIPKDIEFTIVQEAGARTSLYDARGKVDSLIGQVKDLVQQHHWDGVIISGAP |
Ga0137380_104995083 | 3300012206 | Vadose Zone Soil | MPPAIKTKVGFIGNSAPSSPHHESFKAFIPEDIEFTIVQEAGARTSLYDARGKVDSLIGQVKDLVQQHHWDGVIISGAPKEALN |
Ga0137459_11554911 | 3300012228 | Soil | MTQTGPIKIGFLGSSAPSSPHHASFKKFIPSDIDFTFMQESGEKTSLYDAQGKVEPLIEQSRQLIAANGWNGLIISGAPKEALNPGMWEKVSAALTVPVSLALRSS |
Ga0137360_107257163 | 3300012361 | Vadose Zone Soil | MPIKIGFMGSSAPSSPHHDSFRRFIPKDLEFTFVQEAGVKTSLYDARGKVDALIGQVQELIAEHSWDGVIISGAPKEALNPGMWERVS |
Ga0157343_10338621 | 3300012488 | Arabidopsis Rhizosphere | MPTKIGFIGSSAPSSPHHDSFRAFIPRDISFSFVQETRIKGSLYDARGKLDTLISEVKELSGQQGWNGIIISGGPKEALNPGMWQRVV |
Ga0157351_10005151 | 3300012501 | Unplanted Soil | MPTKIGFIGSSAPSSPHHDSFRAFIPRDISFSFVQETGIKGSLYDARGKLDTLISEVKELSGQQGWNGIIISGAPKEALNPGMWQRVVAEIDKPVALAL |
Ga0157316_10837261 | 3300012510 | Arabidopsis Rhizosphere | MPTKIGFIGSSAPSSPHHDSFRAFIPRDISFSFVQETGIKGSLYDARGKLDTLISEVKELSGQQGWNGIIISGAPKEALNPGMWQRVVAKIEKPVALAL |
Ga0137373_112773962 | 3300012532 | Vadose Zone Soil | MPLAIKTNIGFIGNSAPSSPHHESFKAFIPKDIDFTIVQEDGEKTSLYDARGKVDSLIGQVKDLVQQHHWDGVIISGAP |
Ga0157304_10740642 | 3300012882 | Soil | VTSSKPEKRMPIKIGFLGSSAPSSPHHDSFRAFIPKDIVFTFAQETGDKTSLYDARGKIAPLIAQAKELIRENAWDGLIISGAPKEALNSGMWQRVVEEIKE |
Ga0137413_101700514 | 3300012924 | Vadose Zone Soil | MPVKIGFIGSSAPSSPHHDSFRRFIPKDLEFTFVQEAGVKTSLYDARGKVDALIRQVQELIAERDWDGVIISGAPK |
Ga0134076_103614222 | 3300012976 | Grasslands Soil | MPPIKTKVGFIGNSAPSSPHHESFKAFIPEDIEFTIVQEAGARTSLYDARGKVDSLIGQVKDLVQQHHWDGVIISGAPKEALNPGMWERVSAELEVPVSLAL |
Ga0157378_121498712 | 3300013297 | Miscanthus Rhizosphere | VTSSKPEKRMPIKIGFLGSSAPSSPHHDSFRAFIPKDIVFTFAQETGDKTSLYDARGKIAPLIAQAKELIRENAWDG |
Ga0075327_12747062 | 3300014272 | Natural And Restored Wetlands | MAQSRQARIGFIGSSAPSSPHHDSFRAFIPKDLDFTFVQEAGEKTSLYDARGKVDALIGQVRDLIAERGWDGVIISGAPKEALNPG |
Ga0075344_10204813 | 3300014296 | Natural And Restored Wetlands | MTTTRAKIGFIGSSAPSSPHHESFKAFIPLDIEITFVQEAEATGSLYDSRGKVDSLIRQASALKETNQWDGVIVSGGPREAL |
Ga0075352_11938362 | 3300014324 | Natural And Restored Wetlands | VANAKIGFLGSSSPSSPHHDSFRAFIPKEIEFTFVQEAGADGSLWSAKGKLDVLIQQSRKLIEQYKWDALIIS |
Ga0157380_120938592 | 3300014326 | Switchgrass Rhizosphere | MTQTAPMKIGFLGSSAPSSPHHASFKRFIPADVEFTFTQESGEKTSLYDAEGKVGSLIEESRQLIRANDWHGLIISGAPKEALNPG |
Ga0132256_1012679853 | 3300015372 | Arabidopsis Rhizosphere | MPVKIGFIGSSAPSSPHHDSFRRFIPKDLEFTFVQEAGVKTSLYDARGKVDALIGQVQELIAARDWDGVIISGA |
Ga0132256_1032090362 | 3300015372 | Arabidopsis Rhizosphere | MPTKIGFIGSSAPSSPHHDSFRAFIPRDISFNFVQETGIKGSLYDARGKLDTLISEVKELSGQQGWNGIIISGAPKEALNPGMWQRVVAEIDKP |
Ga0132257_1035848302 | 3300015373 | Arabidopsis Rhizosphere | MTASIKLGFLGSSAPSSPHHASFKKFIPADVDVAFTQERGGSTSLYDAKGKVAALIEQANALIAESAWQGLIIS |
Ga0132255_10000200023 | 3300015374 | Arabidopsis Rhizosphere | MPLKIGFIGSSAASSPHHDSFRALIPKDISFTFVQETGVKTSLYDARGKVDAVIAQAKELIRENGWDGIIISGAPKEALNPGMWQRAVE |
Ga0132255_1014765074 | 3300015374 | Arabidopsis Rhizosphere | VTSSKPEKRMPIKIGFLGSSAPSSPHHDSFRAFIPKEIVFTFSQETGDKTSLYDARGKIAPLIAQAKELIRENAWDGLIISGA |
Ga0182035_102145601 | 3300016341 | Soil | MRLGAESKQLMAIKIKIGFIGSSAPSSPHHDSFRTLIPADISFSFMQETGAKTSLYDARGKIDALISQVKELPQQYGWNGVIISGAPKEA |
Ga0182037_101700023 | 3300016404 | Soil | MRLGAESKQLMAIKIKIGFIGSSAPSSPHHDSFRAFIPAEISFLFVQEAGVKTSLYDARGKIDALISQVKELLRQYGWNGVIISSAPKE |
Ga0184608_102610712 | 3300018028 | Groundwater Sediment | MIKARIGFIGSSAPASPHHESFKAFIPNDIDFAIVQEAGPKTSLYDARGRVDPLIHQVRELVEQQHWDGVIISGAPKEALNP |
Ga0184638_13178691 | 3300018052 | Groundwater Sediment | VAKAKIGFLGSSSPSSPHHDSFRAFIPKDIDLTFVQEAGADGSLWSAKGKLNALIQQSLDLIAHYKWDGLIISGAPKEVLNPGMSARLAAELPVPVATALRSSAAALKAFAAKRILLMT |
Ga0184626_100800851 | 3300018053 | Groundwater Sediment | VAKAKIGFLGSSSPSSPHHDSFRAFIPKDIDLTFVQEAGADGSLWSAKGKLDALIQQSRELIEQNKWDGLIISGAPKEVLNPNMSARLAAELPVPVATALRSSAAALKA |
Ga0184626_102258302 | 3300018053 | Groundwater Sediment | MSLRAKAKIGFIGSSAPSSPHHESFKAFIPKDIDITFVQEEGAGSSLYDTRGKVDSLVGQTMGLIEKHGWDGVIISGGPREVL |
Ga0184626_102927641 | 3300018053 | Groundwater Sediment | MIKARIGFIGSSAPASPHHESFKAFIPKDIDFAIVQEAGPKTSLYDARGKVEPLIHQVRELIEQQHWDGVIISGAPKEALNPGMWERVSQELKVP |
Ga0184623_104846032 | 3300018056 | Groundwater Sediment | MSASETVKIGFLGSSAASSPHHASFKKFIPADIEFTFLQESGTHTSLYDAKGKVDALIGQSNELISERGWNGLIISGAPKEALNPGMWEQVSAALSIPVALALRS |
Ga0187773_105558273 | 3300018064 | Tropical Peatland | MPDTKPIKIGFLGSSAPSSPHHASFKAFIPKQIDFTFMQETGAKTSLYDAKGKVTALVEQSKLLIETNRWDGLIIS |
Ga0184628_100559693 | 3300018083 | Groundwater Sediment | MADSTRTKIGFLGSSAASSPHHGSFKKFIPDDIDFTFVQESGANTSLYNAKGKVDALIDQSQQLIAAHGWNGLIISGAPKEALNAGMWEQVSAALDI |
Ga0184629_103606111 | 3300018084 | Groundwater Sediment | VAKAKIGFLGSSSPSSPHHDSFRAFIPKDIAFTFVQGAGADGSLWSAKGKLDALIQQSRELIAQNKWDGLIISGAPKEVL |
Ga0190265_134330982 | 3300018422 | Soil | MAQLKSTRIGFLGSSAPSSPHHVSFKAFIPDDIDFTFVQESGGKSSLYDARGKVAALTDQVRQLIAEHSWEGVIISGAPKEALNPGMCEQVSAALNV |
Ga0190269_106203192 | 3300018465 | Soil | MSKTAPIKIGFLGSSAPSSPHHASFRKFIPEDINFTFMQESGTHTSLYDAKGKVDALIEQSRQLIETNHWRGLIISGAPKE |
Ga0190271_103412951 | 3300018481 | Soil | MSQTISMKIGFLGSSAPSSAHHASFKKFIPADIDFTFMQDSGTHTSLYDAQGKVDALIEQSRELVSTNGWRGLIISGAPKEALNPGMWEQVTAALN |
Ga0190264_106546152 | 3300019377 | Soil | VTKASIGFIGSSAPSSPHHNSFRAFIPAEIDFTFVQEADAGGSLWDARDKLDALLQQSRDLIKQNKWDALIISGAYKEVLNENM |
Ga0193741_10990701 | 3300019884 | Soil | MANATRTKIGFLGASAATSPHHTSFKKFIPDDVDFTFLQESGANSSLYNAKGKVDALLAQSQQLIAERGWNGLIISGAPK |
Ga0193727_10508584 | 3300019886 | Soil | MPVKIGFIGSSAPSSPHHDSFRRFIPKDLEFTFVQEAGVKTSLYDARGKVDALIGQVQELIAERDWDGVIISGAPKEALN |
Ga0193749_10237011 | 3300020010 | Soil | MPVKIGFIGSSAPSSPHHDSFRRFIPKDLEFTFVQEAGAKTSLYDARGKVDALIGQVQELIAEHSWDGVIISGAPKEALNPGMWER |
Ga0194121_100738113 | 3300020200 | Freshwater Lake | MANPIKIGFLGSSSPSSSHHASFKKFIPSDIDFTFMQERGENASLYDAKGKVGSLIAQAKELIAERNWNGLIISGGPKEALNPSMWEEVSAAL |
Ga0209109_100646161 | 3300025160 | Soil | MAKAKIGFLGSSSPSSPHHDSFRAFIPKDIEFTFVEEAGADGSLWSAKGKLDALIRQSRELIEQNKWDGLIISGAPKEVLNPGMSARLAAELPVPVATALRSSTAALKAFA |
Ga0209343_105897441 | 3300025311 | Groundwater | MAKAKIGFLGSSSPSSPHHDSFRAFIPKDIEFTFVQEAGADGSLWSAKGKLDVLIQQSRELIAQYKWNGLIISGAPKEVLNPNMSAR |
Ga0209323_104503352 | 3300025314 | Soil | MAKAKIGFLGSSSPSSPHHDSFRAFIPKDIEFTFVQEAGADGSLWSAKGKLDVLIQQSRELIAQYKWNGLIISGAPKEVLNPNMSARLAAELAVPVAT |
Ga0207697_101547551 | 3300025315 | Corn, Switchgrass And Miscanthus Rhizosphere | MPIKIGFLGSSAPSSPHHDSFRAFIPKEIVFTFSQETGDKTSLYDARGKIAPLIAQAKELIRENAWDGLIISGAPKEALNSGMWQRVVEEIKEPVALALSKKTG |
Ga0209519_105456331 | 3300025318 | Soil | MAKAKIGFLGSSSPSSPHHDSFRAFIPKDIEFTFVQEAGADGSLWSAKGKLDVLIQQSRELIAQYKWNGLIISGAPKEVLNPNMSARLAAEL |
Ga0207680_108516142 | 3300025903 | Switchgrass Rhizosphere | MATKIGFIGSSAPSSPHHDSFRAFIPRDISFSFVQETAIKGSLYDARGKLDTLISEVKELIRQHDWNGVIISGAPKEALNRGMWQRVIAEIEKPVALALRSSVAALKVFRAK |
Ga0207647_101147781 | 3300025904 | Corn Rhizosphere | MPIKIGFLGSSAPSSPHHDSFRAFIPKEIVFTFAQETGDKTSLYDARGKIAPLIAQAKELLRENAWDGLIISGAPKEALNSGMWQRVVEEIKEPVALALRSSVA |
Ga0207649_115666362 | 3300025920 | Corn Rhizosphere | MPTKIGFIGSSAPSSPHHDSFRAFLPRDISFSFVQETGIKGSLYDARGKLDTLISEVKELSGQQGWNGIIISGAPKEALNPGMWQ |
Ga0207644_101079613 | 3300025931 | Switchgrass Rhizosphere | MPTKIGFIGSSAPSSPHHDSFRAFIPRDISFSFVQETAIKGSLYDARGKLDTLISEVKELIRQHDWNGVIISGAPKEALNRGMWQRVIAE |
Ga0207706_109445971 | 3300025933 | Corn Rhizosphere | VTSSKLMPIKIGFLGSSAPSSPHHDSFRAFIPKEILFDFVQESGAKGSLYDARGKLVSLIQQAQELIRQYGWNGLILSGAPKEALNPGMWQRVCQEISVPV |
Ga0207706_110105021 | 3300025933 | Corn Rhizosphere | MPTKIGFIGSSAPSSPHHDSFRAFLPRDISFSFVQETGIKGSLYDARGKLDTLISEVKELSGQQGWNGIIISGAPKEALNPGMWQRVVAKIEKHVALALRSSVADLKAFR |
Ga0207669_102575614 | 3300025937 | Miscanthus Rhizosphere | MPIKIGFLGSSAPSSPHHDSFRAFIPKEIVFTFAQETGDKTSLYDARGKIAPLIAQAKELLRENAWDGLIISGAPKEALNSG |
Ga0208778_10347931 | 3300026025 | Rice Paddy Soil | MSHTPSLKIGFIGSSSPASPHHESFKAFIPRDVELSFVQEAGEKNSLYDARGKVDALIGQAQKLAVERGWHGVIISGAPKEALNPGMWERVSAESKVPVSLALRSSV |
Ga0208422_10171253 | 3300026053 | Natural And Restored Wetlands | MTQTVPIKIGFLGSSAPSSPHHASFKQFIPRDIDFTFVQESGEKTSLYDAQGKVDALIEQSRQLIAANGWSGLIISGAPKEALNPGMWEKVSAALTVPVSLA |
Ga0207708_109679901 | 3300026075 | Corn, Switchgrass And Miscanthus Rhizosphere | MPVKIGFIGSSAPSSPHHDSFRKFIPKDLEFTFVQEAGVKTSLYDARGKVDALIRHVQELIAARDWDGVI |
Ga0207648_113822841 | 3300026089 | Miscanthus Rhizosphere | MPVKIGFIGSSEPSSPHHDSFRRFIPKDLEFTFVQEAGVKTSLYDARGKVDALIGQVQELIAERDWDGVIISGA |
Ga0209470_11404652 | 3300026324 | Soil | MPPAIKTKVGFIGNSAPSSPHHESFKAFIPEDIEFTIVQEAGARTSLYDARGKVDSLIGQVKDLVQQHHWDGVIISGAPKEALNPGMWERVSAELEVPVS |
Ga0207486_10171312 | 3300026943 | Soil | MPIKIGFLGSSAPSSPHHDSFRAFIPKEIVFTFAQETGDKTSLYDARGKIAPLIAQAKELIRENAWDGLIISGAPKEAL |
Ga0256866_11211811 | 3300027650 | Soil | MPTTIGFIGSSAPSSPHHDSFRAFIPKDIEFTFVQEAGEKTSLYDVRGKVEVLLDQTRGLIAEQRWDGAIISGAP |
Ga0209983_11276502 | 3300027665 | Arabidopsis Thaliana Rhizosphere | MSHTPSLKIGFIGSSSPASPHHESFKAFIPRDVELTFVQEAGAKNSLYDARGKVDALIGQVQKLVVERGWHGVIISGAPKEALNPGMWERVSA |
Ga0209971_10456211 | 3300027682 | Arabidopsis Thaliana Rhizosphere | MSHTPSLKIGFIGSSSPASPHHESFKAFIPRDVELTFVQEAGAKNSLYDARGKVDALIGQVQKLVVERGWHGVIISGAPKEALNPGMWERVSAELKVPVS |
Ga0209966_11115082 | 3300027695 | Arabidopsis Thaliana Rhizosphere | MSHTPSLNIGFIGSSSPASPHHESFKAFIPRDVELTFVQEAGAKNSLYDARGKVDALIGQVQKLVVERGWHGVIISGAPKEALNPGMWERVSAELKVP |
Ga0209074_100862511 | 3300027787 | Agricultural Soil | VTPPSAQPGKLTPTKIGFIGSSAPSSPHHDSFRAFIPRDISFSFVQETGIKGSLYDARGKLDTLISEVKELSGQQDWNGIIISGAP |
Ga0209706_102931601 | 3300027818 | Freshwater Sediment | MTQTGQIKIGFLGSSAPSSPHHASFKKFIPSDIDFTFRQESGEKTSLYDAQGKVEALIEQSRQLIAANGWNGLIISGAPKEALNPGMWERVSAALKVPVSLALRSSVA |
Ga0209481_102241262 | 3300027880 | Populus Rhizosphere | MPPAIKTKVGFIGNSAPSSPHHESFKAFIPKDIEFTIVQEAGARTSLYNARGKVDSLIGQVKDLVQQHDWDGVIISGAPKEALNPGMWERVSAELEVP |
Ga0209496_105195981 | 3300027890 | Wetland | MTQTGPIKIGFLGSSAPSSPHHASFKKFIPSDIDFTFMQESGEKTSLYDAQGEVEPLIEQSRQLIAANGWNGLIISGAPKE |
Ga0209382_102600833 | 3300027909 | Populus Rhizosphere | MADSTRTKIGFLGSSAASSPHHTSFKKFIPDNVDFTFVQELGANSSLYNAKGKVDALIDQSQQLIAAHGWNGLIISGAPKEALNAGMWEQVSAALPIPVALALRS |
Ga0256864_12428041 | 3300027964 | Soil | VTKAKIGFIGSSAPSSPHHDSFRAFIPSDIDFTFVQEAGAGGSLWDAKGKLDALIRQSREVVEQNNWDGLII |
Ga0247824_106619811 | 3300028809 | Soil | VTKAKIGFIGSSAPASPHHDSFKAFIPANIDFTFVQESGSGGSLWDARDKLDGLLQQSRELIDRHEWNGLIISGAPKEVLNADMTARLAAALQVPVATALRSACAALKTFAAKRIL |
Ga0307312_109679282 | 3300028828 | Soil | MPIKIGFIGSSAPSSPHHDSFRRFIPKDLEFTFVQEAGAKTSLYDARGKVDALIGQVQELIAEHSWDG |
Ga0299906_102782344 | 3300030606 | Soil | MPLRMPTTIGFIGSSAPSSPHHDSFRAFIPKDIEFTFVQEAGEKTSLYDVQGKVDSLLDQTRGLIAERRWDGVI |
(restricted) Ga0255310_101535402 | 3300031197 | Sandy Soil | MPPTPKTKIGFIGSSSPASPHHDSFRAFIPKDIEFTFVQESGEKTSLYDARGKVDALIGQVQALIAERRWHGVVISGAPKEALNPGMWEQVS |
Ga0307500_100946561 | 3300031198 | Soil | MPVKIGFIGSSAPSSPHHDSFRRFIPKDLEFTFVQEAGAKTSLYDARGKVDALIGQVQELIAEHSWDGVIISGAPKEALNPGMWERVSGGLKVPISLALRSSVAALK |
Ga0310888_107696361 | 3300031538 | Soil | MATKIGFIGSSAPSSPHHDSFRAFIPRDISFSFVQETAIKGSLYDARGKLDTLISEVKELIRQHDWNGVIISGAPKEALN |
Ga0310887_104914691 | 3300031547 | Soil | MKIGFLGSSAPSSPHHASFKKFIPADIDFTFLQESGTHTSLYDAQGKVDALIEQSRELAESNGWNGLIISGAPKEALNPGMWEQVSTALNVPVALALRSS |
Ga0310904_108271252 | 3300031854 | Soil | MPLTTKAKIGFIGSSAPSSPHHESFKAFIPKEIDFTFVQEENGGGSLYDAQGKVDSLIGQTVALVEQHGWDGVIISGGPREVL |
Ga0310904_112906161 | 3300031854 | Soil | MKIGFLGSSAPSSPHHASFKKFIPADIDFTFLQESGTHTSLYDAQGKVDALIEQSRELAESNGWNGLIISGAPKEALNPGMWEQVSTALSVPVSLALRSSV |
Ga0307406_111540572 | 3300031901 | Rhizosphere | VTKAKIGFIGSSAPASPHHDSFKAFIPGNIDFTFVQEAGSGGSLWNARDKLDGLLQQSRELIDQHEWNGLIISGAPKEVLNANMTARLAA |
Ga0306926_103747443 | 3300031954 | Soil | MRLGAESKQLMAIKIKIGFIGSSAPSSPHHDSFRAFIPAEISFLFVQEAGVKTSLYDARGKIDALISQVKELLRQYGWNGVIISSAPKEALNRGMWQ |
Ga0306922_103287283 | 3300032001 | Soil | MRLGAESKQLMAIKIKIGFIGSSAPSSPHHDSFRTLIPADISFSFMQETGAKTSLYDARGKIDALISQVKELLRQYGWNGVIISSAPKE |
Ga0307411_114989521 | 3300032005 | Rhizosphere | MTQTAPVKIGFLGSSAPSSPHHASFKRFIPADVEFTFTQESGEKTSLYDAEGKVGSLLEESRQLIRANDWHGLIISGAPKEALNPGMWEQVSTALNVPVALALRSSVAAL |
Ga0310890_110522131 | 3300032075 | Soil | MKIGFLGSSAPSSPHHASFKKFIPADIDFTFLQESGTHTSLYDAQGKVDALIEQSRELAESNGWNGLIISGAPKEALNPGMWEQVSTALNFPVALALRSSV |
Ga0310890_111154513 | 3300032075 | Soil | MATKIGFIGSSAPSSPHHDSFRAFIPRDISFSFVQETAIKGSLYDARGKLDTLISEVKELIRQHDWNGVIISGAPKE |
Ga0335084_120741902 | 3300033004 | Soil | MTTPIKLGFLGSSAPSSPHHANFKKFIPADVDVAFTQERGGSTSLYDAKGKVAALIEQANALIAESAWQGLIIS |
Ga0316605_107206521 | 3300033408 | Soil | MTQTGPIKIGFLGSSAPSSPHHASFKKFIPSDIDFTFMQESGEKTSLYDAQGKVGALIAQSRQLIETNGWTGLIISGAPKEALNPGMWEQVSEALNVPVALALRSS |
Ga0316628_1003963481 | 3300033513 | Soil | MPHSRKTKIGFIGSSAPSSPHHDSFRAFIPKDLDFAFVQEAGAKTSLYDARGKVDVLIDQVQHLLAEQNWDGVIISGAPKEALNPGMWEK |
Ga0364946_128973_292_576 | 3300033815 | Sediment | VAKAKIGFLGSSSPSSPHHDSFRAFIPKNIAFTFVQGAGADGSLWSAKGKLDALIQQSRELIAQNKWDGLIISGAPKEVLNPNMSARLAAELPVP |
Ga0364925_0057422_1_285 | 3300034147 | Sediment | MKIGFLGSSAPSSAHHASFKKFIPADIDFTFMQDSGTHTSLYDAQGKVDALIEQSRELVASNGWRGLIISGAPKEALNPGMWEQVTTALNVPVAL |
Ga0364933_063700_645_917 | 3300034150 | Sediment | MKIGFLGSSAPSSAHHASFKKFIPADIDFTFMQDSGTHTSLYDAQGKVDALIEQSRQLVASNGWRGLIISGAPKEALNPGMWEQVTTALNV |
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