Metagenome Family F039814

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F039814
Family Type	Metagenome
Number of Sequences	163
Average Sequence Length	61 residues
Representative Sequence	AGTSGRHSILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLHGSSTSTTP
Number of Associated Samples	130
Number of Associated Scaffolds	163

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.61 %
% of genes near scaffold ends (potentially truncated)	96.32 %
% of genes from short scaffolds (< 2000 bps)	95.71 %
Associated GOLD sequencing projects	123
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.245 % of family members)
Environment Ontology (ENVO)	Unclassified (31.902 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.945 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.32% β-sheet: 0.00% Coil/Unstructured: 55.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 163 Family Scaffolds
PF00248	Aldo_ket_red	29.45
PF03734	YkuD	5.52
PF00596	Aldolase_II	1.23
PF08240	ADH_N	0.61
PF11742	DUF3302	0.61

COG ID	Name	Functional Category	% Frequency in 163 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	5.52
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	5.52

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	68.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.13 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	68.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.84 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.61 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	27.61 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.84 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	1.23 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.61 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	27.61 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.84 %
Pseudoalteromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae	0.61 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.61 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	27.61 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.61 %
Pseudoalteromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Pseudoalteromonas	0.61 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.61 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	27.61 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.61 %
Pseudoalteromonas haloplanktis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Pseudoalteromonas → Pseudoalteromonas haloplanktis	0.61 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.61 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	27.61 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.61 %
Pseudoalteromonas haloplanktis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Pseudoalteromonas → Pseudoalteromonas haloplanktis	0.61 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.61 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918007\|ConsensusfromContig5468	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	753	Open in IMG/M
2189573004\|GZGWRS402HOKE9	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
2189573004\|GZGWRS402IYJO8	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1061494	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	665	Open in IMG/M
3300001867\|JGI12627J18819_10209109	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300002126\|JGI24035J26624_1002447	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300004156\|Ga0062589_100811381	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	849	Open in IMG/M
3300004157\|Ga0062590_100769110	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300004157\|Ga0062590_101326374	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300005181\|Ga0066678_11004179	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300005186\|Ga0066676_10183793	All Organisms → cellular organisms → Bacteria → Proteobacteria	1335	Open in IMG/M
3300005186\|Ga0066676_10397571	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300005289\|Ga0065704_10630944	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	592	Open in IMG/M
3300005289\|Ga0065704_10751131	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300005294\|Ga0065705_10266473	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300005294\|Ga0065705_10299428	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300005294\|Ga0065705_10964668	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300005332\|Ga0066388_101230421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	1283	Open in IMG/M
3300005332\|Ga0066388_106716320	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	580	Open in IMG/M
3300005355\|Ga0070671_101307437	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	640	Open in IMG/M
3300005364\|Ga0070673_100900089	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	821	Open in IMG/M
3300005365\|Ga0070688_101052562	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	649	Open in IMG/M
3300005366\|Ga0070659_101380920	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	626	Open in IMG/M
3300005367\|Ga0070667_101507500	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	631	Open in IMG/M
3300005437\|Ga0070710_10260734	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300005439\|Ga0070711_100593158	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300005450\|Ga0066682_10372684	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300005455\|Ga0070663_100450003	All Organisms → cellular organisms → Bacteria → Proteobacteria	1061	Open in IMG/M
3300005456\|Ga0070678_100498903	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300005467\|Ga0070706_100641613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	986	Open in IMG/M
3300005526\|Ga0073909_10171327	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300005540\|Ga0066697_10553904	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	644	Open in IMG/M
3300005547\|Ga0070693_100228398	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300005548\|Ga0070665_100679572	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300005548\|Ga0070665_101612598	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	657	Open in IMG/M
3300005553\|Ga0066695_10772487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Pseudoalteromonas → Pseudoalteromonas haloplanktis	556	Open in IMG/M
3300005566\|Ga0066693_10133465	All Organisms → cellular organisms → Bacteria → Proteobacteria	922	Open in IMG/M
3300005578\|Ga0068854_101181938	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300005764\|Ga0066903_103918746	All Organisms → cellular organisms → Bacteria → Proteobacteria	799	Open in IMG/M
3300005844\|Ga0068862_102522176	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300006046\|Ga0066652_101236288	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300006046\|Ga0066652_101473959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	633	Open in IMG/M
3300006169\|Ga0082029_1301040	All Organisms → cellular organisms → Bacteria	4256	Open in IMG/M
3300006175\|Ga0070712_100305140	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300006175\|Ga0070712_101954072	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300006358\|Ga0068871_100847707	All Organisms → cellular organisms → Bacteria → Proteobacteria	845	Open in IMG/M
3300009094\|Ga0111539_12068582	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	660	Open in IMG/M
3300009098\|Ga0105245_10507394	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1223	Open in IMG/M
3300009101\|Ga0105247_11527719	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300009137\|Ga0066709_102434832	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	710	Open in IMG/M
3300009148\|Ga0105243_11853365	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	635	Open in IMG/M
3300009156\|Ga0111538_10059383	All Organisms → cellular organisms → Bacteria	4881	Open in IMG/M
3300009174\|Ga0105241_11903229	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	583	Open in IMG/M
3300009177\|Ga0105248_12649399	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300010361\|Ga0126378_11388468	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	795	Open in IMG/M
3300010366\|Ga0126379_10578011	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1206	Open in IMG/M
3300010366\|Ga0126379_10894422	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	990	Open in IMG/M
3300010366\|Ga0126379_13868739	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	501	Open in IMG/M
3300010376\|Ga0126381_104970657	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300010397\|Ga0134124_11921386	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300010403\|Ga0134123_11484801	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	721	Open in IMG/M
3300010863\|Ga0124850_1002079	All Organisms → cellular organisms → Bacteria	5770	Open in IMG/M
3300010999\|Ga0138505_100075246	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
3300012198\|Ga0137364_10318533	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1157	Open in IMG/M
3300012206\|Ga0137380_11571532	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	542	Open in IMG/M
3300012208\|Ga0137376_11630400	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	536	Open in IMG/M
3300012208\|Ga0137376_11721187	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	518	Open in IMG/M
3300012208\|Ga0137376_11809038	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	501	Open in IMG/M
3300012212\|Ga0150985_102527479	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	857	Open in IMG/M
3300012285\|Ga0137370_10691534	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	633	Open in IMG/M
3300012349\|Ga0137387_10783321	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	690	Open in IMG/M
3300012349\|Ga0137387_10949195	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	619	Open in IMG/M
3300012685\|Ga0137397_11360587	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300012892\|Ga0157294_10211437	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	576	Open in IMG/M
3300012915\|Ga0157302_10008638	All Organisms → cellular organisms → Bacteria	2383	Open in IMG/M
3300012922\|Ga0137394_10371232	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1220	Open in IMG/M
3300012922\|Ga0137394_10526943	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1003	Open in IMG/M
3300012951\|Ga0164300_11039191	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	530	Open in IMG/M
3300012955\|Ga0164298_10735880	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	697	Open in IMG/M
3300012960\|Ga0164301_10199439	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1274	Open in IMG/M
3300012960\|Ga0164301_11191911	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	611	Open in IMG/M
3300012961\|Ga0164302_10239236	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1145	Open in IMG/M
3300012971\|Ga0126369_11479919	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	769	Open in IMG/M
3300012971\|Ga0126369_13114184	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300012985\|Ga0164308_10480456	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1035	Open in IMG/M
3300012985\|Ga0164308_11150174	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	698	Open in IMG/M
3300012988\|Ga0164306_10576307	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300012989\|Ga0164305_10613652	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	876	Open in IMG/M
3300013296\|Ga0157374_12738129	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300015053\|Ga0137405_1391529	All Organisms → cellular organisms → Bacteria	2084	Open in IMG/M
3300015241\|Ga0137418_10397167	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1126	Open in IMG/M
3300015356\|Ga0134073_10086839	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300015371\|Ga0132258_11490419	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1709	Open in IMG/M
3300015372\|Ga0132256_100920961	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	990	Open in IMG/M
3300015372\|Ga0132256_101292216	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	842	Open in IMG/M
3300015372\|Ga0132256_103654688	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300015373\|Ga0132257_101157797	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300015374\|Ga0132255_100201285	All Organisms → cellular organisms → Bacteria	2816	Open in IMG/M
3300015374\|Ga0132255_100686605	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1519	Open in IMG/M
3300015374\|Ga0132255_100969313	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1274	Open in IMG/M
3300015374\|Ga0132255_103665795	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	653	Open in IMG/M
3300018000\|Ga0184604_10276654	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	590	Open in IMG/M
3300018028\|Ga0184608_10129270	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1076	Open in IMG/M
3300018054\|Ga0184621_10227331	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	667	Open in IMG/M
3300018054\|Ga0184621_10324737	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300018056\|Ga0184623_10224688	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	861	Open in IMG/M
3300018465\|Ga0190269_11901509	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300018482\|Ga0066669_11472392	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	618	Open in IMG/M
3300019361\|Ga0173482_10416657	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	629	Open in IMG/M
3300019880\|Ga0193712_1081555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	705	Open in IMG/M
3300019881\|Ga0193707_1043224	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1451	Open in IMG/M
3300019882\|Ga0193713_1038335	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1391	Open in IMG/M
3300019882\|Ga0193713_1080225	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	919	Open in IMG/M
3300019883\|Ga0193725_1047114	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1110	Open in IMG/M
3300019883\|Ga0193725_1113345	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	627	Open in IMG/M
3300019883\|Ga0193725_1143557	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300019996\|Ga0193693_1049935	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	673	Open in IMG/M
3300019998\|Ga0193710_1003790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1520	Open in IMG/M
3300020002\|Ga0193730_1115286	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	740	Open in IMG/M
3300020004\|Ga0193755_1194157	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	585	Open in IMG/M
3300020015\|Ga0193734_1019111	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1296	Open in IMG/M
3300021080\|Ga0210382_10432633	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	583	Open in IMG/M
3300021411\|Ga0193709_1033404	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300022534\|Ga0224452_1087751	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300022694\|Ga0222623_10257580	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	673	Open in IMG/M
3300022756\|Ga0222622_10487237	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300022756\|Ga0222622_10835846	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	673	Open in IMG/M
3300022756\|Ga0222622_10972259	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	623	Open in IMG/M
3300023058\|Ga0193714_1018753	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300023077\|Ga0247802_1086750	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300024055\|Ga0247794_10115434	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300024331\|Ga0247668_1030388	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300025906\|Ga0207699_10175049	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1438	Open in IMG/M
3300025914\|Ga0207671_11202565	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	593	Open in IMG/M
3300025916\|Ga0207663_10329861	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300025916\|Ga0207663_11296141	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	587	Open in IMG/M
3300025917\|Ga0207660_10167680	All Organisms → cellular organisms → Bacteria	1698	Open in IMG/M
3300025918\|Ga0207662_10359899	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300025929\|Ga0207664_10737747	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300025933\|Ga0207706_10134319	All Organisms → cellular organisms → Bacteria	2176	Open in IMG/M
3300025938\|Ga0207704_10576034	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	918	Open in IMG/M
3300025941\|Ga0207711_10472321	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1168	Open in IMG/M
3300026067\|Ga0207678_10359253	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1257	Open in IMG/M
3300026078\|Ga0207702_10808656	All Organisms → cellular organisms → Bacteria → Proteobacteria	927	Open in IMG/M
3300026305\|Ga0209688_1037117	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	929	Open in IMG/M
3300027655\|Ga0209388_1197946	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300028138\|Ga0247684_1022774	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300028379\|Ga0268266_11271549	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	711	Open in IMG/M
3300028707\|Ga0307291_1175156	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
3300028719\|Ga0307301_10074848	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1059	Open in IMG/M
3300028807\|Ga0307305_10540002	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300028811\|Ga0307292_10483114	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300028881\|Ga0307277_10278015	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	741	Open in IMG/M
3300028881\|Ga0307277_10442147	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	582	Open in IMG/M
3300031446\|Ga0170820_12522527	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300031446\|Ga0170820_12524176	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300031820\|Ga0307473_10621111	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	749	Open in IMG/M
3300031879\|Ga0306919_10521098	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300031942\|Ga0310916_11568797	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	535	Open in IMG/M
3300031945\|Ga0310913_11101098	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	555	Open in IMG/M
3300032001\|Ga0306922_10990715	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	868	Open in IMG/M
3300032075\|Ga0310890_10647170	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	823	Open in IMG/M
3300032205\|Ga0307472_100654249	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.07%
Host-Associated	Host-Associated	23.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.33%
Plants	Host-Associated → Plants	23.93%
Aquatic	Environmental → Aquatic	6.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.20%
Sediment	Environmental → Aquatic → Sediment	6.13%
Freshwater	Environmental → Aquatic → Freshwater	0.61%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.61%
Roots	Host-Associated → Plants → Roots	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.67%
Loam	Environmental → Terrestrial → Soil → Loam	11.04%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.07%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.61%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.61%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.61%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.07%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.61%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.61%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.61%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.29%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.07%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.45%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.23%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	1.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.23%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.23%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.23%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.23%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.23%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.23%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.23%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.61%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.61%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.61%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.61%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002126	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300019998	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m1	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A_all_C_01452290	2140918007	Soil	TSGRHTTLERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLHGSSTSTTP
FG2_04911880	2189573004	Grass Soil	AWRVAALWLVSYQAGTSGRHSILERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRNSSTSTTP
FG2_08121420	2189573004	Grass Soil	GLRLVACQYQAGTSGRRSMLERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRGSSTSTTP
AF_2010_repII_A100DRAFT_10614941	3300000655	Forest Soil	RSALDRFVFPILVAIVVVLITDIDTPRGGLISLDERPLLELNEALKASSTATTP*
JGI12627J18819_102091091	3300001867	Forest Soil	SGRHSVLERFVFPVLVAIVIALITDIDTPRGGLISLDERPLLELNETLSRTPATTTP*
JGI24035J26624_10024471	3300002126	Corn, Switchgrass And Miscanthus Rhizosphere	ILERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRRSFTSIAP*
Ga0062589_1008113811	3300004156	Soil	SILERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRGSSTSTAP*
Ga0062590_1007691101	3300004157	Soil	SERRSISERFVFPILVAIVIAIITDIDTPRAGLISVDERPLLELNETLSHASAKTTR*
Ga0062590_1013263742	3300004157	Soil	SILERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNQTLRVSSTPITP*
Ga0066678_110041791	3300005181	Soil	CGLWLVSYQAGTSGRHSILERFVFPMLVAIVITLITDIDTPRGGLISLDERPLLELNETLRGSSTSTTP*
Ga0066676_101837932	3300005186	Soil	LRFVFPLLVAIVITLITHIDTPRQGLISLDESPLLELNETLNGSSTATTP*
Ga0066676_103975713	3300005186	Soil	ILERFVFPILIAIVIAIITDIDTPRGGLVSLDERPLLELNETLSRASATTTP*
Ga0065704_106309441	3300005289	Switchgrass Rhizosphere	TSGRHSILERFVFPILIAIVIAIITDIDTPRGGLVSLDERPLLELNETLSRASTTTTP*
Ga0065704_107511311	3300005289	Switchgrass Rhizosphere	SELHSILERFVFPVLVAIVIAIITDIDTPRGGLISLDERPLLELNETLNRSSTATTP*
Ga0065705_102664731	3300005294	Switchgrass Rhizosphere	VAGCGLWLVSYQGGTSGRHSILERFVFPVLVAIVIAIITDIDTPRGGLISLDERPLLELNETLNRSSTATTP*
Ga0065705_102994283	3300005294	Switchgrass Rhizosphere	AGTSGRHSILERFVFPILIAIVIAIITDIDTPRAGLVSLDERPLLELNETLSRTSATTTP
Ga0065705_109646681	3300005294	Switchgrass Rhizosphere	ERFVFPVLVAIVIAIITDIDTPRGGLISLDERPLLELSETLRGSSTSTTP*
Ga0066388_1012304211	3300005332	Tropical Forest Soil	LWLVSYPAGTSGRHSVPERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLEINETLRRASATTTH*
Ga0066388_1067163201	3300005332	Tropical Forest Soil	GRHSVLERFVFPVLVAIVIALITDIDTPRGGLISLDERPLLELNETLSRTPATTTP*
Ga0070671_1013074371	3300005355	Switchgrass Rhizosphere	RFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRGSSTSTAP*
Ga0070673_1009000891	3300005364	Switchgrass Rhizosphere	GHSILERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRGSSTSTAP*
Ga0070688_1010525622	3300005365	Switchgrass Rhizosphere	LERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRGSSTSTAP*
Ga0070659_1013809202	3300005366	Corn Rhizosphere	WLLLLCVAGSGMWLVSYPAGTSGRRSISERFVFPILVAIVIAIITDIDTPRAGLISVDERPLLELNETLNHGSATTTP*
Ga0070667_1015075001	3300005367	Switchgrass Rhizosphere	VFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRSSSTSTAP*
Ga0070710_102607343	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	SILERFVFPILIAIVIAIITDIDTPRGGLVSLDERPLLELNETLHGSSTSTTP*
Ga0070711_1005931583	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	ILERFVFPILIAIVIAIITDIDTPRAGLISVDERPLLELNETLHGSSTSTTP*
Ga0066682_103726841	3300005450	Soil	LWLVSYQAGTSGRHSILERFVFPTLIAIVIAIITDIDTPRAGLISLDERPLLELNETLHGSSTSTTP*
Ga0070663_1004500033	3300005455	Corn Rhizosphere	GYQAGTSGRRSALDRFVFPILVAIVIILITDIDTPRGGLISLDERPLLELSDALKGPSIGTTP*
Ga0070678_1004989033	3300005456	Miscanthus Rhizosphere	GHSILERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRSSSTSTAP*
Ga0070706_1006416131	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	GCGLWLVSYQAGTSGRHSILERFVFPLLVAIVITLITDIDTPRGGLISLDERPLLELNETLNRSSTSKGP*
Ga0073909_101713273	3300005526	Surface Soil	GLWLVSYQAGTSGRHSILERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETVRASSTSTTP*
Ga0066697_105539042	3300005540	Soil	LLLCVAGCGLWLVSYQAGTSGRHSILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLHGSSTSTTP*
Ga0070693_1002283983	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	GTSGGHSILERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRSSSTSTAP*
Ga0070665_1006795721	3300005548	Switchgrass Rhizosphere	GSGMWLVSYPAGTSGRRSISERFVFPILVAIVIAIITDIDTPRAGLISVDERPLLELNETLNHGSATTTP*
Ga0070665_1016125981	3300005548	Switchgrass Rhizosphere	GRHSILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLRGSSTSTTP*
Ga0066695_107724871	3300005553	Soil	GCGLWLVSYQAGTSGRHSILERFVFPLLVAIVIALITDIDTPRGGLVSLDERPLLELNEILSRSSTATTP*
Ga0066693_101334652	3300005566	Soil	VSYQAGTSGRHSILERFVFPLLVAIVITLITDIDTPRGGLIALDERPLLELNETLDRPPTSTPP*
Ga0068854_1011819382	3300005578	Corn Rhizosphere	LERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRRSFTSIAP*
Ga0066903_1039187461	3300005764	Tropical Forest Soil	RHSVLERFVFPILIAIVIAIITDIDTPRGGFISLDERPLLELSEALNHASGKTTP*
Ga0068862_1025221762	3300005844	Switchgrass Rhizosphere	LERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRGSSTSITP*
Ga0066652_1012362882	3300006046	Soil	SILERFVFPLLVAIVITLITDIDTPRGGLIALDERPLLELNETLDRPPTSTPP*
Ga0066652_1014739592	3300006046	Soil	FPLLVAIVIALITDIDTPRGGLVSLDERPLLELNEILSRSSTATTP*
Ga0082029_13010406	3300006169	Termite Nest	FVFPILLAVVIAIITDIDTPRAGLIAVDERPLLEINETLGRPSAKTAP*
Ga0070712_1003051401	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GCGVWLVSYQAGTSGRHSILERFVFPILIAIVIAIITDIDTPRAGLISVDERPLLELNETLRASSTSTAP*
Ga0070712_1019540722	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LCVAGCGLWLVSYQAGTSGRHSILERFVFPVLVAIVIAIITDIDTPRAGLISLDERPLLELNETLRGSSTSTTP*
Ga0068871_1008477072	3300006358	Miscanthus Rhizosphere	ERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLRGSSTSTAP*
Ga0111539_120685821	3300009094	Populus Rhizosphere	AGTSGRRSISERFVFPILVAIVIAIITDIDTPRAGLISVDERPLLELNETLNHGSATTTP
Ga0105245_105073943	3300009098	Miscanthus Rhizosphere	FPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRGSSTSTAP*
Ga0105247_115277192	3300009101	Switchgrass Rhizosphere	SGGHSILERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRGSSTSTAP*
Ga0066709_1024348322	3300009137	Grasslands Soil	YQAGTSGRHSILERFVFPLLVAIVITLITDIDTPRGGLIALDERPLLEMNETLNRPSTSTAP*
Ga0105243_118533652	3300009148	Miscanthus Rhizosphere	SILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLRGSSTSITP*
Ga0111538_100593835	3300009156	Populus Rhizosphere	VAGCGLWLVSYQAGTSGRHSILERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRGSSTSITP*
Ga0105241_119032291	3300009174	Corn Rhizosphere	RFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRGSFTSIAP*
Ga0105248_126493992	3300009177	Switchgrass Rhizosphere	LCVAGCGLWLVSYQAGTSGGHSILGRFIFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRSSSTSTAP*
Ga0126378_113884682	3300010361	Tropical Forest Soil	WLVSYQAGISGRYSVLERFIFPVLVAIVIVLITDIDTPRGGLISLDERPLLELNETLTGSSTTTTP*
Ga0126379_105780111	3300010366	Tropical Forest Soil	RFVFPILVAIVVVLITDIDTPRGGLISLDERPLLELNEALKGSSTATTP*
Ga0126379_108944223	3300010366	Tropical Forest Soil	HSILERFIFPVLVAIVIVLITDIDTPRGGLISLDERPLLELNETLTGSSTTTTP*
Ga0126379_138687391	3300010366	Tropical Forest Soil	GRRSILERFICPVLVAIVIALITDMDTPRRGLISLDERPLLELNEALKSLSTATKP*
Ga0126381_1049706572	3300010376	Tropical Forest Soil	SYPAGTSGRRSISERFVFPILLAIVIAIITDIDTPRGGLIAVDERPLLELDESLSHASLKTTP*
Ga0134124_119213862	3300010397	Terrestrial Soil	CVAGCGLWLVSYQAGTSGGHSILERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRSSSTSTAP*
Ga0134123_114848011	3300010403	Terrestrial Soil	TFGRHSVLERFVFPILIAIVIAIITDIDTPRGGLISLDERPLLELNEALSRPSAKTTP*
Ga0124850_10020798	3300010863	Tropical Forest Soil	LLCVAGCGLWLVSYPAGTSGRHSVPERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLEINETLRRASATTTH*
Ga0138505_1000752462	3300010999	Soil	LERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELSETLSRASATTTP*
Ga0137364_103185331	3300012198	Vadose Zone Soil	SYQAGTSGRHSILERFVFPLLVAIVITLITDIDTPRGGLIALDERPLLELNETLHRPSTSTAP*
Ga0137380_115715321	3300012206	Vadose Zone Soil	GTSGRHSILERFVFPVLVAIVITLITDIDTPRGGLVSLDERPLLELNETLNRPSTSAAP*
Ga0137376_116304001	3300012208	Vadose Zone Soil	VFPLLVAIVITLITDIDTPRGGLISLDERPLLELNETLNRLSASKGP*
Ga0137376_117211872	3300012208	Vadose Zone Soil	VFPLLVAIVITLITDIDTPRGGLISLDERPLLELNETLNRSSTSKEP*
Ga0137376_118090381	3300012208	Vadose Zone Soil	AGTSGRHSILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLHGSSTSTTP
Ga0150985_1025274792	3300012212	Avena Fatua Rhizosphere	WLVSYQAGTSQRHSVLERLVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNQTLRGPSTSATP*
Ga0137370_106915342	3300012285	Vadose Zone Soil	LLCVAGCGLWLVSYQAGTSGRHSILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLSRASATTTP*
Ga0137387_107833211	3300012349	Vadose Zone Soil	FVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLNRPSTSAAP*
Ga0137387_109491952	3300012349	Vadose Zone Soil	GLWLVSYQAGTSGRHSILERLVFPLLVAIVIALITDIDTPRGGLVSLDERPLLELNEILSRSSTATTP*
Ga0137397_113605871	3300012685	Vadose Zone Soil	AGCGLWLVSYQGGTSGRHSILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLHGSSTSTTP*
Ga0157294_102114372	3300012892	Soil	QAGTSGRHSILERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRGSSTSITP*
Ga0157302_100086384	3300012915	Soil	HSILERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRGSSTSTAP*
Ga0137394_103712323	3300012922	Vadose Zone Soil	VSYQAGTSGRHSILERFVFPILVAIVIAIITDIDTPRGGMISLDERPLLELNETLRDSSTSTTP*
Ga0137394_105269433	3300012922	Vadose Zone Soil	VFPILIAIVIAIITDIDTPRGGLVSLDERPLLELNETLSRASATTTP*
Ga0164300_110391912	3300012951	Soil	GTSGRHSILERFVFPILIAIVIAIITDIDTPRGGMISLDERPLLELNETLRGSSTSTTP*
Ga0164298_107358802	3300012955	Soil	RFVFPILIAIGIAIITDIDTPRAGLISLDERPLLELNETLRRASATTMP*
Ga0164301_101994393	3300012960	Soil	YQAGTSGRHSILERFVFPVLIAIVIAIITDIDTPRAGLISLDERPLLELNETLRGSSTSTTP*
Ga0164301_111919112	3300012960	Soil	ERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLRRASATTTP*
Ga0164302_102392361	3300012961	Soil	TSGRHSILERFVFPILIAIVIAIITDIDTPRGGLVSLDERPLLELNETLHGSSTLTTP*
Ga0126369_114799192	3300012971	Tropical Forest Soil	GCGLWLVSYQAGTSGRHSILDRFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLNGSSTATTP*
Ga0126369_131141841	3300012971	Tropical Forest Soil	LVFPILIAIVIAVITDIDIPRAGFISLDERPLLESNETLSRPSAKTTP*
Ga0164308_104804563	3300012985	Soil	VAGCGLWLVSYQAGTSGRRSILERFVFPILIAIVIAIITDIDTPRAGLISVVERSLKKLNEKMRDSSTSTTP*
Ga0164308_111501742	3300012985	Soil	RHSILERFVFPLLVAIVITLITDIDTPRGGLISLDERPLLELNETLRGSSTSTTP*
Ga0164306_105763071	3300012988	Soil	LWLVSYQAGTSGRRSILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLRRASATTTP*
Ga0164305_106136521	3300012989	Soil	ILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLRRASATTMP*
Ga0157374_127381292	3300013296	Miscanthus Rhizosphere	WLVSYPAGTSGRRSISERFVFPLLVAIVIAIITDIDTPRGGLVSLDERPLLELNATLHGSSASTTP*
Ga0137405_13915295	3300015053	Vadose Zone Soil	HSILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLRGSCTSTTP*
Ga0137418_103971671	3300015241	Vadose Zone Soil	VWLLLLCVAGCGLWLVSYQAGTSGRHSILERFVFPLLVAIVITLITDIDTPRGGLIALDERPLLELNETLHRPSTSTAP*
Ga0134073_100868392	3300015356	Grasslands Soil	LWLVSYQAGTSGRHSILERFVFPLLVAIVITLITDIDTPRGGLIALDERPLLEMNETLNRPSTSTAP*
Ga0132258_114904193	3300015371	Arabidopsis Rhizosphere	AGCGLWLVSYQAGTSGRHSILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLRGSSASTTP*
Ga0132256_1009209613	3300015372	Arabidopsis Rhizosphere	YQAGTSGRHSILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLHGSSTSTTP*
Ga0132256_1012922162	3300015372	Arabidopsis Rhizosphere	QAGTSGRHSILERFVFPILIAIVIAIITDIDTPRGGLVSLDERPLLELNETLHGSSTSTTP*
Ga0132256_1036546882	3300015372	Arabidopsis Rhizosphere	GMWLVSYPAGNSGRRSISERFVFPILVAVVIAIITDIDTPRAGLISVDERPLLELNETLNHGSATTTP*
Ga0132257_1011577971	3300015373	Arabidopsis Rhizosphere	LVSYQAGTSGRHSILERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRGSSTSTMP*
Ga0132255_1002012854	3300015374	Arabidopsis Rhizosphere	GTSGRRSALDRFVFPILVAIVVVLITDIDTPRGGLISLDERPLLELNETLKSSSTATTP*
Ga0132255_1006866053	3300015374	Arabidopsis Rhizosphere	GLWLVSYQAGTSGRHSILERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNQTLRGSSTSTAP*
Ga0132255_1009693133	3300015374	Arabidopsis Rhizosphere	SGRRSISERFVFPILVAIVIAIITDIDTPRAGLISVDERPLLELNEALTHASATTTP*
Ga0132255_1036657951	3300015374	Arabidopsis Rhizosphere	LLLLCVAGCGVWLVSYPAGSSGRHSLLERFVFPILIAVVIAIITDIDTPRGGFISLDERPLLELSETVNRGAATTSP*
Ga0184604_102766542	3300018000	Groundwater Sediment	LLLLSVAGCGVWLVSYQAGTSGRHSILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLSRASATKTP
Ga0184608_101292703	3300018028	Groundwater Sediment	ERFVFPILIAIVIAIITDIDTPRGGLVSLDERPLLELNETLHGSSTSTTP
Ga0184621_102273311	3300018054	Groundwater Sediment	QAGTSGRHSILERFVFPILIAIVIAIITDIDTPRGGLVSLDERPLLELNETLSRASARAT
Ga0184621_103247372	3300018054	Groundwater Sediment	VSYQAGTAGRHSILERFVFPVLVAIVVALITDIDTPRGGLISMDERPLLELNETLRGSSTSTTP
Ga0184623_102246881	3300018056	Groundwater Sediment	VAGCGLWLVSYQAGTSGRHSILERFVFPILIAIVIAIITDIDTPRGGLVSLDERPLLELNETLHGSSTSTTP
Ga0190269_119015091	3300018465	Soil	VSYPAGTSGRHSILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLSRASATTTP
Ga0066669_114723922	3300018482	Grasslands Soil	CGVSLVSYQAVTSGRHSILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLHGSSTSTTP
Ga0173482_104166572	3300019361	Soil	CGLWLVSYQAGTSGGHSILERFVFPVLLAIVITLITDIDTPRGGLISLDERPLLELNETLRSSSTSTAP
Ga0193712_10815552	3300019880	Soil	LCVAGCGLWLVSYPAGTFRRHSILERFVFPILIAIVIAIITDIDTPRGGLVSLDERPLLELNETLSRASATTTP
Ga0193707_10432241	3300019881	Soil	ILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLRGSSTSTTP
Ga0193713_10383351	3300019882	Soil	PAGTSGRHSILERFVFPILIAIVIAIITDIDTPRGGLVSLDERPLLELNETLSRASATTT
Ga0193713_10802251	3300019882	Soil	LLLLCVTGCGLWLVSYQAGTSGRHSILERFVFPILIAIVIAIITDIDTPRGGLVSLDERPLLELNETMHGSSTSTTP
Ga0193725_10471141	3300019883	Soil	LLLLSVAGCGLWLVSYQAGTSARHSILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLRGSSTSTTP
Ga0193725_11133451	3300019883	Soil	RFVFPILIAIVIAIITDIDTPRAGLVSLDERPLLELNETLHGSSTSTTP
Ga0193725_11435572	3300019883	Soil	ERFVFPILIAIVIAIITDIDTPRGGLVSLDERPLLELNETLSRASATTTP
Ga0193693_10499352	3300019996	Soil	TSGRHSILERFVFPILIAIVIAIITDIDTPRGGLVSLDERPLLELNETLSRASATTTP
Ga0193710_10037901	3300019998	Soil	VAGCGLWLVSYQAGTSGRHSILERFVFPILIAIVIAIITDIDTPRAGLVSLDERPLLELNETLHGSSTSTTP
Ga0193730_11152862	3300020002	Soil	IFERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLSRTSATTTP
Ga0193755_11941572	3300020004	Soil	LERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLSRTSATTTP
Ga0193734_10191111	3300020015	Soil	SGRHSILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLSRASAKATP
Ga0210382_104326331	3300021080	Groundwater Sediment	LLSVAGCGLWLVSYQAGTSGRHSILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLSRTSATTTP
Ga0193709_10334041	3300021411	Soil	ERFVFPILIAIVIAIITDIDTPRAGLVSLDERPLLELNETLHGSSTSTTP
Ga0224452_10877513	3300022534	Groundwater Sediment	TSGRHSILERFVFPILIAIVIAIITDMDTPRGGLVSLDERPLLELNETLSRASATTTL
Ga0222623_102575802	3300022694	Groundwater Sediment	FVFPILIAIVIAIITDIDTPRGGLVSLDERPLLELNETLHGSSTSTTP
Ga0222622_104872371	3300022756	Groundwater Sediment	WLVSYQAGTSGRHSILERFVFPILIAIVIAIITDMDTPRGGLVSLDERPLLELNETLSRASATTTL
Ga0222622_108358462	3300022756	Groundwater Sediment	LERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLSRASATTTR
Ga0222622_109722592	3300022756	Groundwater Sediment	RHSILERFVFPILIAIVIAIITDIDTPRAGFISLDERPLLELKETLTRASATTRP
Ga0193714_10187531	3300023058	Soil	AGTSGRRSILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLRRASATTTP
Ga0247802_10867501	3300023077	Soil	SYQAGTSGRHSILERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRGSSTSITP
Ga0247794_101154342	3300024055	Soil	WLVSYQSGTSGRHSILERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRGSSTSITP
Ga0247668_10303883	3300024331	Soil	TFGRHSVLERFVFPILIAIVIAIITDIDTPRGGLISLDERPLLELNETLSRPSAKTTP
Ga0207699_101750491	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	WLVSYQAGTFGRHSVLERFVFPILIAIVIAIITDIDTPRGGLISLDERPLLELNETLSRPSAKTTP
Ga0207671_112025652	3300025914	Corn Rhizosphere	LGRFIFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRSSSTSTAP
Ga0207663_103298611	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	ATIVIRGVWLVSYQAGTSGRHSILERFVFPILIAIVIAIITDIDTPRVGLISVDERPLLELNETLHGSSTSTTP
Ga0207663_112961411	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LLLSVAGCGVWLVSYQAGTSGRHSILERFVFPILIAIVIAIITDIDTPRAGLISVDERPLLELNETLHGSSTSTTP
Ga0207660_101676801	3300025917	Corn Rhizosphere	LLLLCVAGCGLWLVSYQAGTSGGHSILERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRSSSTSTAP
Ga0207662_103598993	3300025918	Switchgrass Rhizosphere	VTGCGLWLVSYQAGTSGRHSILERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELKETLRGSSTSTTP
Ga0207664_107377472	3300025929	Agricultural Soil	LLSVAGCGLWLVSYQAGTFGRHSVLERFVFPILIAIVIAIITDIDTPRGGLISLDERPLLELNETLSRPSARTTP
Ga0207706_101343191	3300025933	Corn Rhizosphere	WLVSYQAGTSGRHSILERFVFPILVAIVIAIITDIDTPRAGLISLDERPLLELNETLRGSSTSTTP
Ga0207704_105760341	3300025938	Miscanthus Rhizosphere	PGDVWLLLLCVAGCGLWLVSYQAGTSGRHSILERFVFPILVAIVIAIITDIDTPRAGLISLDERPLLELNETLRGSSTSTTP
Ga0207711_104723213	3300025941	Switchgrass Rhizosphere	WLLLLCVAGCGLWLVSYQAGTSGRHSILERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRRSFTSIAP
Ga0207678_103592533	3300026067	Corn Rhizosphere	WLVGYQAGTSGRRSALDRFVFPILVAIVIILITDIDTPRGGLISLDERPLLELSDALKGPSIGTTP
Ga0207702_108086563	3300026078	Corn Rhizosphere	ILERFVSPVLVAIVITLITDIDTPRGGLISLDERPLLELKETLRGSSTSTTP
Ga0209688_10371172	3300026305	Soil	GCGLWLVSYQAGTSGRHSILERFVFPLLVAIVITLITDIDTPRGGLIALDERPLLELNETLDRPPTSTPP
Ga0209388_11979461	3300027655	Vadose Zone Soil	HSILERFVFPLLVAIVITLITDIDTPRQGLISLDERPLLELNETLSRSSTPTTP
Ga0247684_10227743	3300028138	Soil	LDRFVFPILVAIVIILITDIDTPRGGLISLDERPLLELKNALKSPSTGTP
Ga0268266_112715491	3300028379	Switchgrass Rhizosphere	YQAGTFGRHSILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLRGSSTSTTP
Ga0307291_11751561	3300028707	Soil	WLLLLCVAGCGLWLVSYQAGTSGRRSILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLRRASATTTP
Ga0307301_100748482	3300028719	Soil	VTGCGLWLVSYQAGTSGRHSILERFVFPILIAIVIAIITDMDTPRGGLVSLDERPLLELNETLHRSSTSTTP
Ga0307305_105400021	3300028807	Soil	HSILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLHRSSTSTTP
Ga0307292_104831141	3300028811	Soil	SILERFVFPVLLAIVVALITDIDTPRGGLISMDERPLLELNETLSRSSTPTTP
Ga0307277_102780152	3300028881	Soil	LLLLCVTGCGLWLVSYQAGTSGRHSILERFVFPILIAIVIAIITDIDTPRAGLISLDERPLLELNETLSRASATTTP
Ga0307277_104421472	3300028881	Soil	ERFVFPILIAIVIAIITDIDTPRAGLVSLDERPLLELNETLHRSSTSTTP
Ga0170820_125225271	3300031446	Forest Soil	ILERFVFPLLVAIVITLITDIDTPRGGLISLDERPLLELNEILSRSSTATTP
Ga0170820_125241761	3300031446	Forest Soil	ILERFVFPLLVAIVITLITDIDTPRGGLISLDERPLLELNETLRNSSTSTTP
Ga0307473_106211112	3300031820	Hardwood Forest Soil	LSVAGCGVWLVSYQAGTFGRHSVLERFVFPILIAIVIAIITDIDTPRGGLISLDERPLLELNETLSRPSAKRTP
Ga0306919_105210981	3300031879	Soil	VFPILVAIVIVLITDIDTPRGGLISLDERPLLELNETLNHASGKTTP
Ga0310916_115687972	3300031942	Soil	TSGRRSALDRFVFPILVAIVIVLITDIDTPRGGLISLDERPLLELNETLNHASGKTTP
Ga0310913_111010981	3300031945	Soil	LLLLCVAGCGLWLVSYQAGTSGRRSALDRFVFPILVAIVIVLITDIDTPRGGLISLDERPLLELNETLNHASGKTTP
Ga0306922_109907151	3300032001	Soil	LLLCVAGCGLWLVSYQAGTSGRHSVLERFVFPVLVAIVIALITDIDTPRGGLISLDERPLLELNETLSRTPAATTP
Ga0310890_106471701	3300032075	Soil	LCVAGCGLWLVSYQAGTSGRHSILERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLRGSSTSTTP
Ga0307472_1006542491	3300032205	Hardwood Forest Soil	SYQAGTSGRHSILERFVFPVLVAIVITLITDIDTPRGGLISLDERPLLELNETLSHADSKTTP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F039814

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences