Metagenome Family F039815

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F039815
Family Type	Metagenome
Number of Sequences	163
Average Sequence Length	55 residues
Representative Sequence	MLWWIGSGLILLWLILLVAQQRGWIHLLLLSGISVLIVQVAAYRKTKYEHRFRE
Number of Associated Samples	122
Number of Associated Scaffolds	163

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	53.37 %
% of genes near scaffold ends (potentially truncated)	14.11 %
% of genes from short scaffolds (< 2000 bps)	82.21 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.252 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil (12.270 % of family members)
Environment Ontology (ENVO)	Unclassified (31.902 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.374 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.32% β-sheet: 0.00% Coil/Unstructured: 42.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 163 Family Scaffolds
PF00486	Trans_reg_C	69.94
PF00664	ABC_membrane	4.29
PF00691	OmpA	3.68
PF02518	HATPase_c	1.84
PF13360	PQQ_2	1.23
PF12911	OppC_N	0.61
PF13487	HD_5	0.61
PF13541	ChlI	0.61
PF03755	YicC_N	0.61
PF01523	PmbA_TldD	0.61
PF08352	oligo_HPY	0.61
PF13567	DUF4131	0.61

COG ID	Name	Functional Category	% Frequency in 163 Family Scaffolds
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	0.61
COG1561	Endoribonuclease YloC, YicC family	Translation, ribosomal structure and biogenesis [J]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.25 %
Unclassified	root	N/A	6.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.25 %
Unclassified	root	N/A	6.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.25 %
Unclassified	root	N/A	6.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	68.10 %
Unclassified	root	N/A	6.75 %

Name	Rank	Taxonomy	Distribution
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	31.90 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	20.86 %
Unclassified	root	N/A	6.75 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.61 %

Name	Rank	Taxonomy	Distribution
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	31.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.86 %
Unclassified	root	N/A	6.75 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.61 %

Name	Rank	Taxonomy	Distribution
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	31.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.86 %
Unclassified	root	N/A	6.75 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.61 %

Name	Rank	Taxonomy	Distribution
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	31.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.86 %
Unclassified	root	N/A	6.75 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.61 %

Name	Rank	Taxonomy	Distribution
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	31.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.86 %
Unclassified	root	N/A	6.75 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_108998525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300000891\|JGI10214J12806_11717001	All Organisms → cellular organisms → Bacteria → Acidobacteria	1732	Open in IMG/M
3300000956\|JGI10216J12902_102121035	All Organisms → cellular organisms → Bacteria	2083	Open in IMG/M
3300000956\|JGI10216J12902_106992719	All Organisms → cellular organisms → Bacteria	1994	Open in IMG/M
3300003267\|soilL1_10057454	All Organisms → cellular organisms → Bacteria	6995	Open in IMG/M
3300003321\|soilH1_10121222	All Organisms → cellular organisms → Bacteria	1841	Open in IMG/M
3300003324\|soilH2_10188876	All Organisms → cellular organisms → Bacteria → Acidobacteria	2554	Open in IMG/M
3300003465\|P52013CM_1088126	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300004114\|Ga0062593_100841611	All Organisms → cellular organisms → Bacteria → Acidobacteria	919	Open in IMG/M
3300004114\|Ga0062593_102101580	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300004156\|Ga0062589_102029093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300004156\|Ga0062589_102078100	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300004157\|Ga0062590_101167411	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300004157\|Ga0062590_101977207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300004157\|Ga0062590_102588151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300004463\|Ga0063356_100450840	All Organisms → cellular organisms → Bacteria → Acidobacteria	1679	Open in IMG/M
3300004463\|Ga0063356_104853456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300004479\|Ga0062595_102583511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300004480\|Ga0062592_100818192	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300004643\|Ga0062591_102058193	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300004643\|Ga0062591_102574781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300005093\|Ga0062594_100003884	All Organisms → cellular organisms → Bacteria	4331	Open in IMG/M
3300005093\|Ga0062594_101402689	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300005093\|Ga0062594_102854563	Not Available	538	Open in IMG/M
3300005271\|Ga0065713_1000638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300005289\|Ga0065704_10117688	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1829	Open in IMG/M
3300005289\|Ga0065704_10487258	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	677	Open in IMG/M
3300005293\|Ga0065715_10670997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300005294\|Ga0065705_10720589	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300005332\|Ga0066388_103657721	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300005344\|Ga0070661_101269312	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300005345\|Ga0070692_11281193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300005365\|Ga0070688_101480851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300005440\|Ga0070705_100365520	Not Available	1057	Open in IMG/M
3300005444\|Ga0070694_100410678	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300005444\|Ga0070694_101187886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300005457\|Ga0070662_100763211	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300005545\|Ga0070695_101575522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300005547\|Ga0070693_100150480	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300005547\|Ga0070693_100715163	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300005549\|Ga0070704_101525985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300005614\|Ga0068856_102404514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300005618\|Ga0068864_101703824	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005719\|Ga0068861_100017045	All Organisms → cellular organisms → Bacteria	5151	Open in IMG/M
3300005719\|Ga0068861_100080335	All Organisms → cellular organisms → Bacteria	2551	Open in IMG/M
3300005843\|Ga0068860_102181367	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300005985\|Ga0081539_10002816	All Organisms → cellular organisms → Bacteria	23236	Open in IMG/M
3300006058\|Ga0075432_10575220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300006169\|Ga0082029_1276537	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300006173\|Ga0070716_101111581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300006173\|Ga0070716_101525971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300006804\|Ga0079221_10322872	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300006806\|Ga0079220_10613137	Not Available	777	Open in IMG/M
3300006844\|Ga0075428_100379345	All Organisms → cellular organisms → Bacteria	1516	Open in IMG/M
3300006845\|Ga0075421_100014902	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9706	Open in IMG/M
3300006846\|Ga0075430_100171150	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300006852\|Ga0075433_10610328	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300006876\|Ga0079217_10000705	All Organisms → cellular organisms → Bacteria	8567	Open in IMG/M
3300006876\|Ga0079217_10019282	All Organisms → cellular organisms → Bacteria	2370	Open in IMG/M
3300006876\|Ga0079217_10074942	All Organisms → cellular organisms → Bacteria	1445	Open in IMG/M
3300006876\|Ga0079217_10129156	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300006876\|Ga0079217_10287753	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300006894\|Ga0079215_10049661	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300006903\|Ga0075426_10010016	All Organisms → cellular organisms → Bacteria	6743	Open in IMG/M
3300006918\|Ga0079216_10041825	All Organisms → cellular organisms → Bacteria	1924	Open in IMG/M
3300006918\|Ga0079216_11785921	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300006954\|Ga0079219_11849129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300006969\|Ga0075419_10462613	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300006969\|Ga0075419_10523531	All Organisms → cellular organisms → Bacteria → Acidobacteria	826	Open in IMG/M
3300009094\|Ga0111539_10003488	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	20732	Open in IMG/M
3300009101\|Ga0105247_11686938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300009147\|Ga0114129_10285143	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2205	Open in IMG/M
3300009162\|Ga0075423_10234730	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1922	Open in IMG/M
3300009174\|Ga0105241_10036155	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3716	Open in IMG/M
3300009174\|Ga0105241_10258018	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1480	Open in IMG/M
3300009177\|Ga0105248_13174790	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	523	Open in IMG/M
3300009789\|Ga0126307_10616149	All Organisms → cellular organisms → Bacteria → Acidobacteria	876	Open in IMG/M
3300009840\|Ga0126313_11869606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300010040\|Ga0126308_11157718	Not Available	546	Open in IMG/M
3300010045\|Ga0126311_10015794	All Organisms → cellular organisms → Bacteria → Acidobacteria	4359	Open in IMG/M
3300010166\|Ga0126306_11823124	Not Available	510	Open in IMG/M
3300010359\|Ga0126376_10204867	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1638	Open in IMG/M
3300010397\|Ga0134124_10262660	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1593	Open in IMG/M
3300010399\|Ga0134127_11828913	All Organisms → cellular organisms → Bacteria → Acidobacteria	684	Open in IMG/M
3300012922\|Ga0137394_10797046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300012948\|Ga0126375_10099283	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1720	Open in IMG/M
3300012960\|Ga0164301_10243829	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1175	Open in IMG/M
3300013297\|Ga0157378_12079045	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300013306\|Ga0163162_12269001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300013307\|Ga0157372_11415609	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300013307\|Ga0157372_11605379	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	749	Open in IMG/M
3300013307\|Ga0157372_11864846	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	691	Open in IMG/M
3300013308\|Ga0157375_10058896	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3802	Open in IMG/M
3300013308\|Ga0157375_12214857	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	655	Open in IMG/M
3300014325\|Ga0163163_10908562	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	944	Open in IMG/M
3300014325\|Ga0163163_10963564	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	916	Open in IMG/M
3300014745\|Ga0157377_10921734	All Organisms → cellular organisms → Bacteria → Acidobacteria	655	Open in IMG/M
3300014745\|Ga0157377_11747246	Not Available	503	Open in IMG/M
3300015371\|Ga0132258_10261376	All Organisms → cellular organisms → Bacteria → Acidobacteria	4237	Open in IMG/M
3300015371\|Ga0132258_12250843	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1368	Open in IMG/M
3300015372\|Ga0132256_100765526	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1082	Open in IMG/M
3300015374\|Ga0132255_105048413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300018422\|Ga0190265_12800227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300019360\|Ga0187894_10002223	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	23456	Open in IMG/M
3300020146\|Ga0196977_1000211	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	35064	Open in IMG/M
3300021445\|Ga0182009_10045465	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1834	Open in IMG/M
3300021445\|Ga0182009_10810976	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300024179\|Ga0247695_1000460	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	5905	Open in IMG/M
3300025885\|Ga0207653_10353100	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300025908\|Ga0207643_10331587	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300025911\|Ga0207654_10580978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300025912\|Ga0207707_10054036	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3496	Open in IMG/M
3300025917\|Ga0207660_10373439	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1145	Open in IMG/M
3300025922\|Ga0207646_11694560	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300025933\|Ga0207706_10058535	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3394	Open in IMG/M
3300025935\|Ga0207709_11816395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300025939\|Ga0207665_10228815	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1366	Open in IMG/M
3300025940\|Ga0207691_10848398	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300025941\|Ga0207711_10022080	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	5320	Open in IMG/M
3300025941\|Ga0207711_10690758	Not Available	952	Open in IMG/M
3300025941\|Ga0207711_11795532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300025945\|Ga0207679_10342954	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1300	Open in IMG/M
3300026075\|Ga0207708_10506929	Not Available	1012	Open in IMG/M
3300026078\|Ga0207702_12454724	Not Available	508	Open in IMG/M
3300026088\|Ga0207641_11780637	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300026095\|Ga0207676_10995341	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	826	Open in IMG/M
3300026116\|Ga0207674_10356720	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1413	Open in IMG/M
3300026118\|Ga0207675_100979113	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	864	Open in IMG/M
3300026121\|Ga0207683_11214618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300026285\|Ga0209438_1025643	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1966	Open in IMG/M
3300027266\|Ga0209215_1003949	All Organisms → cellular organisms → Bacteria → Acidobacteria	1653	Open in IMG/M
3300027637\|Ga0209818_1000036	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	32803	Open in IMG/M
3300027637\|Ga0209818_1002010	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	4010	Open in IMG/M
3300027637\|Ga0209818_1018352	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1495	Open in IMG/M
3300027637\|Ga0209818_1090909	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	796	Open in IMG/M
3300027691\|Ga0209485_1129770	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	737	Open in IMG/M
3300027691\|Ga0209485_1237616	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300027750\|Ga0209461_10112282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300027775\|Ga0209177_10473474	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300027873\|Ga0209814_10201128	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	861	Open in IMG/M
3300027873\|Ga0209814_10312656	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	685	Open in IMG/M
3300027880\|Ga0209481_10535368	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300027886\|Ga0209486_10255909	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1014	Open in IMG/M
3300027886\|Ga0209486_10360782	Not Available	872	Open in IMG/M
3300027907\|Ga0207428_10373150	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1047	Open in IMG/M
3300027909\|Ga0209382_11003222	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	870	Open in IMG/M
3300028380\|Ga0268265_10015529	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	5214	Open in IMG/M
3300030511\|Ga0268241_10047074	All Organisms → cellular organisms → Bacteria → Acidobacteria	917	Open in IMG/M
3300030511\|Ga0268241_10070534	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	776	Open in IMG/M
3300030511\|Ga0268241_10141318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300031455\|Ga0307505_10000005	All Organisms → cellular organisms → Bacteria	326935	Open in IMG/M
3300031455\|Ga0307505_10049675	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1868	Open in IMG/M
3300031548\|Ga0307408_100415776	Not Available	1158	Open in IMG/M
3300031548\|Ga0307408_100780741	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	865	Open in IMG/M
3300031731\|Ga0307405_10119709	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1800	Open in IMG/M
3300031847\|Ga0310907_10265081	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	851	Open in IMG/M
3300031852\|Ga0307410_11197428	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	662	Open in IMG/M
3300032004\|Ga0307414_11220908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300032012\|Ga0310902_10207958	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1153	Open in IMG/M
3300032075\|Ga0310890_10646906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300032144\|Ga0315910_10027821	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	4159	Open in IMG/M
3300032157\|Ga0315912_10002503	All Organisms → cellular organisms → Bacteria	19417	Open in IMG/M
3300032157\|Ga0315912_10870842	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.06%
Host-Associated	Host-Associated	42.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.06%
Plants	Host-Associated → Plants	42.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.99%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.11%
Roots	Host-Associated → Plants → Roots	1.23%
Cave	Environmental → Terrestrial → Cave	0.61%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	23.31%
Loam	Environmental → Terrestrial → Soil → Loam	12.27%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.68%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.23%
Sand	Environmental → Terrestrial → Soil → Sand	0.61%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.61%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.61%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	23.31%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	22.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.07%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.23%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.61%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	0.61%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.61%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.61%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.61%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	12.27%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	8.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.07%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.07%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.07%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.07%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.45%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.23%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.23%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.23%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.61%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.61%
Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Miscanthus Rhizosphere	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.61%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.61%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.61%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.61%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.61%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003465	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P5 sample	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005271	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample from Bulk Soil Replicate 2: eDNA_1	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300020146	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13C	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300027266	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1089985252	3300000559	Soil	MLWWIGAGLIATWFILKFVLHQGGWSHLLLLSGITVXXXXXAAYRKTNYQKASTK*
JGI10214J12806_117170011	3300000891	Soil	SGLILLWLILLVAGQRGWIHLLLLSGITVLIVQLAAYRKTRYAHRFRE*
JGI10216J12902_1021210352	3300000956	Soil	MLWWISSGLILLWLILLIAQQRGWIHLLLLSGITVLIVQIAAYRKTKYEQRLRQ*
JGI10216J12902_1069927193	3300000956	Soil	MLWWIGFGLIVVWLILFVFHPSGWIHLLLLGGITVLVVQTAAYRKTKAALKNQSDHK*
soilL1_100574542	3300003267	Sugarcane Root And Bulk Soil	MLWWIGSGLILLWFILLVAQQRGWIHLLLLSGISVLIVQVAAYRKTRYEHRFRE*
soilH1_101212222	3300003321	Sugarcane Root And Bulk Soil	MLWWIGSGLILLWLILLVAQQRGWIHLLLLSGITVLIIEIAAYRKTRYERFRH*
soilH2_101888763	3300003324	Sugarcane Root And Bulk Soil	MLWWVGSGLVLVWLILVLVHPTGWTHLLLIGGTTMLVVQTAAHRKTKAAMKNRR*
P52013CM_10881262	3300003465	Ore Pile And Mine Drainage Contaminated Soil	MLWWIGSGLILLWLILLIAQQRGWIHLLLLSGITVLIVQIAAYRKTKYEQRLRQ*
Ga0062593_1008416112	3300004114	Soil	MLWWIGSGLILLWLILLIAQQRGWIHLLLLSGITVLIVQFAAYRKTRYQHRFRE*
Ga0062593_1021015802	3300004114	Soil	MLWLVGSGLILAWLILFLVHPSGWIHFLLIGGGSLFVIQTAAHRKTKAALKNRS*
Ga0062589_1020290932	3300004156	Soil	MLWWVGSALIVVWLILLLVHPNGWIHLLLIGGITVLVVQTAAYRKTKSVRKIRD*
Ga0062589_1020781002	3300004156	Soil	GSGLILLWFILLVAQQRGWIHLLLLSGISVLIVQVAAYRKTRYEHRFRE*
Ga0062590_1011674112	3300004157	Soil	MLWWIGSGLILLWLILLIVQQRGWIHLLLLSGITVLIVQVAAYRKTRHEHRFRQ*
Ga0062590_1019772072	3300004157	Soil	MLWWIGSALLLGWLVMLLVHPAGWIHLLLMAGASVLVVQIAAHRKTKAVRDIRG*
Ga0062590_1025881511	3300004157	Soil	MLWWIGSGLIAGWLVLLIVHPAGWIHLLLLSGITVLVVQIAAHRKTKASRDIRG*
Ga0063356_1004508402	3300004463	Arabidopsis Thaliana Rhizosphere	MLWWIGSGQILLWLILLVAQQRGWIHLLLLSGITVLIVQVAAYRKTKYENRLRE*
Ga0063356_1048534562	3300004463	Arabidopsis Thaliana Rhizosphere	MLWWIGSGLLVAWLLMLIVHPSGWIHLMLLSGISVLVVQIAAYRKTKSALANTTDAQRIDD*
Ga0062595_1025835111	3300004479	Soil	MLWWVGSGLIVVWLILYLVHPNGWIHLLLIGGIVMLVVQTAAYRKTKAAMKNRR*
Ga0062592_1008181922	3300004480	Soil	MLWWIGSGLIVAWLILLIVHPAGWMHLLLLSGITVLVVQIAAYRKTKASRDIRG*
Ga0062591_1020581931	3300004643	Soil	RLQVERSALMLWWIGSGLILLWLILLVAQQRGWIHLLLLSGITVLIVEIAAYRKTRYEHKLRE*
Ga0062591_1025747811	3300004643	Soil	MLWWIGSGLILLWLILLIVQQRGWIHLLLLSGITVLIVQVAAYRKTRYEHRFRQ*
Ga0062594_1000038843	3300005093	Soil	MLWLIGSGLILLWLILLVAGQRGWIHLLLLSGITVLIVQLAAYRKTRYAHRFRE*
Ga0062594_1014026891	3300005093	Soil	ERSALMLWWIGSGLILLWLILLIAQQRGWIHLLLLSGITVLIVQFAAYRKTRYQHRFRE*
Ga0062594_1028545632	3300005093	Soil	MLWWIGSGLILLWLILLVAQQRGWVHLLLLSGITVLIVQVAAYRKTRYEHRFRD*
Ga0065713_10006381	3300005271	Miscanthus Rhizosphere	MLWWIGTGLIFVWVILELFARRGWIHLLLISGICILIIQIAAYRKAKSV*
Ga0065704_101176883	3300005289	Switchgrass Rhizosphere	MLWWVGSGLILLWLILLIAQQRGWIHLLLLSGISVLIIQVAAYRKTKYEHRFRE*
Ga0065704_104872582	3300005289	Switchgrass Rhizosphere	MLWWIGSGLILLWLILLIAQQRGWIHLLLLSGITVLIVQVAAYRKTRYEHRFRQ*
Ga0065715_106709972	3300005293	Miscanthus Rhizosphere	MLWWVGSGLILLWLVLRLLAPRRWIPLLLISGISVLIIQIAAYRKTKDAHKRR*
Ga0065705_107205891	3300005294	Switchgrass Rhizosphere	MLWWVGSGLILLWLILLIAQQRGWIHLLLLSGISVLIVQVAAYRKTKYEHRFRQ*
Ga0066388_1036577212	3300005332	Tropical Forest Soil	MLWWIGSGLILLWFILLVVQQRGWIHLLLLSGISVLIVQVAAYRKTRYEHRFRE*
Ga0070661_1012693122	3300005344	Corn Rhizosphere	MLWWIGLGLIVVWLILFVFHPSGWIHLLLLGGVTVLVVQTAAYRKTKAALKNHSDHK*
Ga0070692_112811932	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MLWRIGSGLLVAWLIMLLVHPSGWIHLLLLSGISVLVVQIAAYRKTKASLRNDN*
Ga0070688_1014808512	3300005365	Switchgrass Rhizosphere	MLWKIGSGLLVAWLIMLLVHPSGWIHLLLLSGISVLVVQIAAYRKTKASLRNDN*
Ga0070705_1003655201	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MLWWIGSGLLVLWLILFIVHPTGWIHLLLLSGVSLFVIQIAAYRKTKATLQNHK*
Ga0070694_1004106782	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MLWWVGSGLLLVWLILFLVHPSGWIHFLLLGGISLFVIQTAAYRKTKAVRKLRD*
Ga0070694_1011878861	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MNWWVGLGLIVVWLILFMVHPSGWIHLLLIGGATVLVVETAAHRKTKDVMKNRR*
Ga0070662_1007632112	3300005457	Corn Rhizosphere	MLWLIGSGLILLWLILLVAGQRGWIHLLLLSGISVLIVQVAAYRKTRYEHRFRE*
Ga0070695_1015755222	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MLWWVGSGLVLVWLILLVVHPTGWIHFLLIGGISCFVIQTAAHRKTKAAMKNHR*
Ga0070693_1001504802	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MNWWVGLGLIVVWLILFLVHPSGWIHLLLIGGTTVLVVETAAHRKTKDVMKNRR*
Ga0070693_1007151632	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MLWWVGSSLIVVWLILLLVHPNGWIHLLLIGGITVLVVQTAAYRKTKSVRKIRD*
Ga0070704_1015259852	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MLWLIGSGLIVAWLILLIVHPAGWMHLLLLSGITVLVVQIAAHRKTKASRDIRG*
Ga0068856_1024045142	3300005614	Corn Rhizosphere	MLWWVGSGLIVVWLILYLVHPNGWIHLLLIGGITVLVVQTAAHRKTKAAMKNRR*
Ga0068864_1017038241	3300005618	Switchgrass Rhizosphere	MLWWVGSGLIVVWLILFLVHPNGWIHLLLIGGITLLVVQTAAYRKTKSVRKFRD*
Ga0068861_1000170452	3300005719	Switchgrass Rhizosphere	MLWWIGSGLLVLWLILFIVHPSGWIHLLLLSGVSLFVIQIAAYRKTKATLQNHK*
Ga0068861_1000803353	3300005719	Switchgrass Rhizosphere	MLWRIGSGLLVAWLIMLIVHPSGWIHLLLLSGISVLVVQIAAYRKTKASLPDDN*
Ga0068860_1021813671	3300005843	Switchgrass Rhizosphere	RLQVERSALMLWWIGSGLILLWFILLVAQQRGWIHLLLLSGISVLIVQVAAYRKTRYEHRFRE*
Ga0081539_1000281610	3300005985	Tabebuia Heterophylla Rhizosphere	MLWWVGSGLILAWFVLFFVHPSGWIPLLLVGGISLFVIQTAAHRKTKAVTKNQR*
Ga0075432_105752201	3300006058	Populus Rhizosphere	MLWCVGSGLVLVWLILFLVHPRGWIHFLLVGGISLFVIQTAAYRKTKAAMKNHS*
Ga0082029_12765371	3300006169	Termite Nest	MLWWIGSGLILLWLILLVAQQRGWIHLLLLSGITVLIIQVAAYRKTRYEHRFRDKSV
Ga0070716_1011115811	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MLWCVGAGLIVVWLILFIFHPSGWIHLLLLGGITVLVVQTAAYRKTKAAAKSHR*
Ga0070716_1015259712	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MNWWVGLGLIVVWLILFLVHPSGWIHLLLIGGATVLVVETAAHRKTKDVMKNRR*
Ga0079221_103228722	3300006804	Agricultural Soil	MLWWVGSGLIVVWLILYLVHPNGWIHLLLIGGIVMLVVQTAAHRKTKAAMKNRR*
Ga0079220_106131371	3300006806	Agricultural Soil	MLWVVGSGLILVWLILYLIHPSGWIHIVLLGGITLLVVQTAAHRKTKAARNLR
Ga0075428_1003793452	3300006844	Populus Rhizosphere	MLWWIGSGLILLWLILLVAQQRGWIHLLLLSGITVLIVQIAAYRKTRYQHRFRDKSV*
Ga0075421_1000149027	3300006845	Populus Rhizosphere	MLWWIGSGLILLWLILLIAQQRGWIHLLLLSGITVLIVQIAAYRKTKYEQGFRE*
Ga0075430_1001711502	3300006846	Populus Rhizosphere	MLWWIGSGLILLWLILLVAHQRGWIYLLLLSGITVLIVQIAAYRKTRYEHRFRDKSV*
Ga0075433_106103282	3300006852	Populus Rhizosphere	MLWWVGSGLILAWFILFIVHPSGWIPLLLVGGISLFVIQTAAHRKTKAVTKNHR*
Ga0079217_100007057	3300006876	Agricultural Soil	MLWWIGSGLILLWLILLVAQQRGWIHLLLLSGISVLIVEIAAYRKTRYEHRIRDKSV*
Ga0079217_100192823	3300006876	Agricultural Soil	MLWWIGSGLILLWLILLVAQQRGWIHLLLLSGITVLIIEIAAYRKTRYERRLRE*
Ga0079217_100749421	3300006876	Agricultural Soil	MLWWIGSGLILLWLILLVAQQRGWIHLLLLSGITVLIVEIAAYRKTRYEHRFRDKSV*
Ga0079217_101291562	3300006876	Agricultural Soil	MLWWIGSGLLVCWLILLVVHPAGWIHLLLLSGISVLVVQIAAYRKTKASRDIRG*
Ga0079217_102877532	3300006876	Agricultural Soil	MLWWIGSGLLVAWLIMLIVHPSGWIHLMLLAGISVLVVQIAAYRKTKSTLRNDN*
Ga0079215_100496612	3300006894	Agricultural Soil	MQWWVGAGLLVVWLILLVVGQRGWIHLVLLGGISVLVVQIAAHRKTKSVRDMRG*
Ga0075426_100100165	3300006903	Populus Rhizosphere	MLWCVGSGLIVVWLVLFLVHPTGWIHLLLIGGTTVLVVQTAAYRRTKAALKHHR*
Ga0079216_100418252	3300006918	Agricultural Soil	MLWWIGSGLLVCWLILLAVHPAGWIHLLLLSGISVLVVQIAAYRKTKASRDIRG*
Ga0079216_117859212	3300006918	Agricultural Soil	MLWWIGSGLILLWLILLVAQQRGWIHLLLLSGITVLIVQVAAYRKTRYEHRFRE*
Ga0079219_118491292	3300006954	Agricultural Soil	MLWWVGSGLIAVWLILFLVHPSGWIHLLLISGSTLLVVQTAAHRKTKAAMKSRR*
Ga0075419_104626131	3300006969	Populus Rhizosphere	MLWWIGSGLILLWLILLVLQQRGWIHLLLLSGISVLIVEIAAYRKTRYEHRFRNKSV*
Ga0075419_105235312	3300006969	Populus Rhizosphere	RLQVERSALMLWWIGSGLILLWLILLIAQQRGWIHLLLLSGITVLIVQVAAYRKTKYEQGFRE*
Ga0111539_1000348818	3300009094	Populus Rhizosphere	MLWWIGSGLILLWFILLVAQQRGWIHLLLLSGITVLIVQVAAYRKTRYEHRFRE*
Ga0105247_116869381	3300009101	Switchgrass Rhizosphere	MLWWIGSGLILFWLILLVAQQRGWIHLLLLSGITVLIVQIAAYRKTRYEHRFRE*
Ga0114129_102851432	3300009147	Populus Rhizosphere	MLWWIGSGLILLWLILLIAQQRGWIHLLLLSGITVLIVQVAAYRKTKYEQGFRE*
Ga0075423_102347303	3300009162	Populus Rhizosphere	MLWLVGSGLILAWLILFLVHPSGWIHFLLIGGGSLFVIQTAAHRKTKAAIKNRS*
Ga0105241_100361553	3300009174	Corn Rhizosphere	MLWWVGSGLIVVWLILYLVHPNGWIHLLLIGGITMLVVQTAAHRKTKAAMKNRR*
Ga0105241_102580182	3300009174	Corn Rhizosphere	MLWVIGSGLILGWLILLIFHPVGWMHLLLLSGISVLVVQIAAHRKTKASRDIRG*
Ga0105248_131747902	3300009177	Switchgrass Rhizosphere	MLWLIGSGLILLWLILLVAGQRGWIHLLLLSGITVLIVQLAGYRKTRYAHRFRE*
Ga0126307_106161492	3300009789	Serpentine Soil	MLWWIGSGLILVWLILLVAQQRGWIHLLLLSGISVLIVQVAAYRKTKYEHRFRG*
Ga0126313_118696062	3300009840	Serpentine Soil	MLWWIGSGLILLWLILLVAQQRGWIHLLLLSGISVLIVQVAAYRKTKYEHRFRE*
Ga0126308_111577181	3300010040	Serpentine Soil	MLWWIGSGLLVAWVILLIVHPSGWIHLLLLSGISVLVIQIAAYRKTKSALRNDN*
Ga0126311_100157941	3300010045	Serpentine Soil	MLWWIGSGLILCWLILLIAHPGGWIHLLLLSGFTVLVVQIAAYRKTKSHR*
Ga0126306_118231242	3300010166	Serpentine Soil	MLWWIGSGLLVAWLIMLIVHPSGWIHLLLLSGISVLVVQIAAYRKTKSALRNDN*
Ga0126376_102048672	3300010359	Tropical Forest Soil	MLWWIAFGLIVVWLILFIFHPSGWIHLLLLGGITVLVVQTAAYRKTKAAGKNH*
Ga0134124_102626602	3300010397	Terrestrial Soil	MLWWVGSALIVVWLILFLVHPNGWIHLLLIGGITLLVVQTAAYRKTKSVRKFRD*
Ga0134127_118289132	3300010399	Terrestrial Soil	RMLWWIGTGLLILWAILELFVRRGWIHLLLLSGICILIVQIAAYRKTKQNR*
Ga0137394_107970462	3300012922	Vadose Zone Soil	MLWWIGTGLIAAWFILKFVLHQGGWSPLLLLSGITVLIVQYAAYRKTNYQKASKDK*
Ga0126375_100992832	3300012948	Tropical Forest Soil	MLWWIGSGFLVAWFVMRVVLHKHGMVHLLLITGITVLVVQIAAYRKTKYQKKNVR*
Ga0164301_102438292	3300012960	Soil	MLWWVGSALIVVWLTLLLVHPNGWIHLLLIGGITVLVVQTAAYRKTKSVRKIRD*
Ga0157378_120790452	3300013297	Miscanthus Rhizosphere	MLWWIGSGLILLWFILLVAQQRGWIHLLLLSGISVLIVQVAAYRKTRYERVASDKRP*
Ga0163162_122690011	3300013306	Switchgrass Rhizosphere	MLWWVGSGLILAWFILFIVHPSGWIPLLLVGGISLFVIQTAAHRKTKAVTKNDR*
Ga0157372_114156092	3300013307	Corn Rhizosphere	MLWWIGSGLIVAWLILLIVHPAGWMHLLLLSGITVLVVQIAAHRKTKASRDIRG*
Ga0157372_116053792	3300013307	Corn Rhizosphere	MLWWIGSGLILLWLILLVAQQRGWIHLLLLSGITVLIIEIAAYRKTRYERFRD*
Ga0157372_118648462	3300013307	Corn Rhizosphere	MLWWVGSGLVLVWLILFVVHPTGWIHFLLIGGISCFVIQTAAHRKTKAAMKNHR*
Ga0157375_100588963	3300013308	Miscanthus Rhizosphere	MLWWIGTGLIFVWVILELFARRGWIHLLLLSGICILIIQTAAYRKAKMHR*
Ga0157375_122148572	3300013308	Miscanthus Rhizosphere	MLWKIGSGLLVVWLIMLIVHPSGWIHLLLLSGISVLVVQIAAYRKTKASLRNDN*
Ga0163163_109085622	3300014325	Switchgrass Rhizosphere	MLWLVGTGLVVVWLILFLFHPAGWIHLLLLGGITVLVVQLAAYRKTKASRNIHS*
Ga0163163_109635642	3300014325	Switchgrass Rhizosphere	MLWWIGSGLILLWLILLIAQQRGWIHLLLLSGISVLIVQVAAYRKTRYGHRFRE*
Ga0157377_109217342	3300014745	Miscanthus Rhizosphere	MLWRIGSGLLVAWLIMLIVHPRGWIHLLLLSGISVLVVQIAAYRKTKASLRNDN*
Ga0157377_117472462	3300014745	Miscanthus Rhizosphere	QAQRDPLMLWWIGSGLIAGWLVLLIVHPAGWIHLLLLSGITVLVVQIAAHRKTKASRDIRG*
Ga0132258_102613764	3300015371	Arabidopsis Rhizosphere	MMWWVGSSLIVVWLILFLVHPSGWIHLLLVAGISLFVIQTAAHRKTKAASKSQR*
Ga0132258_122508432	3300015371	Arabidopsis Rhizosphere	MLWWIGSGLILLWLILLIAQQRGWIHLLLLSGITVLIVQFAAYRKTRYEQRFRQ*
Ga0132256_1007655262	3300015372	Arabidopsis Rhizosphere	MNWWVGLGLIVVWLILFLVHPTGWVHLLLIGGTTLIVVQTAAHRKTKDALKNRK*
Ga0132255_1050484131	3300015374	Arabidopsis Rhizosphere	MLWWVGAGLLLAWLVLYRIHPSGWIHFLLVGGISLFVIQTAAHRKTKAARNL
Ga0190265_128002272	3300018422	Soil	MLWWIGSGLILLWLILLVAQQRGWIHLLLLSGISVLIVEIAAYRKTRYEHRFRDKSV
Ga0187894_100022236	3300019360	Microbial Mat On Rocks	MLWWIGSGLIVGWLILFVFHPAGWIPLLLLSGISIFVIQIAAHRKTKASLPNQK
Ga0196977_100021117	3300020146	Soil	MLWWIGSGLLVGWLILLIVHPAGWIHLLLLSGISVLVVQIAAHRKTKAARDIRD
Ga0182009_100454652	3300021445	Soil	MLWWVGSGLIAVWLILFLVHPSGWVHLLLIAGSTLLVVQTAAHRKTKAAMKNRR
Ga0182009_108109761	3300021445	Soil	MLWLVGSGLILAWLILFLVHPSGWIHFLLIGGGSLFVIQTAAHRKTKAALKNRS
Ga0247695_10004603	3300024179	Soil	MLWLIGLGLVVVWLILFLFHPSGWIHLLLLGGITVLVVQTAAYRKTKATLKNNGDHS
Ga0207653_103531002	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MLWWIGSGLLVLWLILFIVHPTGWIHLLLLSGVSLFVIQIAAYRKTKATLQNHK
Ga0207643_103315872	3300025908	Miscanthus Rhizosphere	MLWWIGSGLILLWLILLVAQQRGWVHLLLLSGITVLIVQVAAYRKTRYEHRFRDKSV
Ga0207654_105809782	3300025911	Corn Rhizosphere	MLWVIGSGLILGWLILLIFHPVGWMHLLLLSGISVLVVQIAAHRKTKASRDIRG
Ga0207707_100540362	3300025912	Corn Rhizosphere	MLWWIGLGLIVVWLILFVFHPSGWIHLLLLGGVTVLVVQTAAYRKTKAALKNHSDHK
Ga0207660_103734392	3300025917	Corn Rhizosphere	MLWWIGSGLILLWFILLVAQQRGWIHLLLLSGISVLIVQVAAYRKTRYEHRFRE
Ga0207646_116945601	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LWWVGSGLLLVWLILFLVHPSGWIHFLLIGGISLFVIQTAAYRKTKAVRNLRD
Ga0207706_100585352	3300025933	Corn Rhizosphere	MLWLIGSGLILLWLILLVAGQRGWIHLLLLSGISVLIVQVAAYRKTRYEHRFRE
Ga0207709_118163952	3300025935	Miscanthus Rhizosphere	MLWWIGSGLILLWLILLVAQQRGWIHLLLLSGITVLIVQIAAYRKTRYQHRFRDKSV
Ga0207665_102288152	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MLWWVGIAFVVVWLILFLFHPAGWIPLLLLGGITMLVVQTAAYRKTKAATKNHG
Ga0207691_108483982	3300025940	Miscanthus Rhizosphere	MLWRIGSGLILLWFILLVAQQRGWIHLLLLSGISVLIVQVAAYRKTRYQHRFRE
Ga0207711_100220803	3300025941	Switchgrass Rhizosphere	MLWKIGSGLLVAWLIMLLVHPSGWIHLLLLSGISVLVVQIAAYRKTKASLRNDN
Ga0207711_106907582	3300025941	Switchgrass Rhizosphere	MLWWIGSGLILFWLILLVAQQRGWIHLLLLSGITVLIVQIAAYRKTRYEHRFRE
Ga0207711_117955322	3300025941	Switchgrass Rhizosphere	MLWWIGSGLIAGWLVLLIVHPAGWIHLLLLSGITVLVVQIAAHRKTKASRDIRG
Ga0207679_103429542	3300025945	Corn Rhizosphere	MLWWIGSGLILLWFILLVAQQRGWIHLLLLSGISVLIVQVAAYRKTRYEHRSRE
Ga0207708_105069292	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MLWLIGSGLILLWLILLVAGQRGWIHLLLLSGITVLIVQLAAYRKTRYERRVR
Ga0207702_124547242	3300026078	Corn Rhizosphere	RLQAERDSVMLWWVGSGLIVVWLILYLVHPNGWIHLLLIGGITVLVVQTAAHRKTKAAMKNRR
Ga0207641_117806371	3300026088	Switchgrass Rhizosphere	PGSRLQVERSALMLWWIGSGLILLWFILLVAQQRGWIHLLLLSGISVLIVQVAAYRKTRYEHRFRE
Ga0207676_109953412	3300026095	Switchgrass Rhizosphere	MLWWVGSGLIVVWLILFLVHPNGWIHLLLIGGITLLVVQTAAYRKTKSVRKFRD
Ga0207674_103567202	3300026116	Corn Rhizosphere	MLWWIGSGLILLWLILLIAQQRGWIHLLLLSGISVLIVQVAAYRKTRYEHRFRE
Ga0207675_1009791132	3300026118	Switchgrass Rhizosphere	MLWWIGSGLILLWFILLVAQQRGWIHLLLLSGISVLIVQVAAYRKTKYEHRFRD
Ga0207683_112146182	3300026121	Miscanthus Rhizosphere	MLWWIGSGLILLWFILLVAQQRGWIHLLLLSGITVLIVQLAAYRKTRYERRVR
Ga0209438_10256432	3300026285	Grasslands Soil	MLWWIGTGLIAAWFILKFVLHQGGWSPLLLLSGITVLIVQYAAYRKTNYQKASTGK
Ga0209215_10039492	3300027266	Forest Soil	MLWWIGSGLLVGWLILLIVHPAGWIHLLMLSGISVLVIQIAAYRKTKATRNLRG
Ga0209818_100003617	3300027637	Agricultural Soil	MLWWIGSGLILLWLILLVAQQRGWIHLLLLSGISVLIVEIAAYRKTRYEHRIRDKSV
Ga0209818_10020102	3300027637	Agricultural Soil	MLWWIGSGLILLWLILLVAQQRGWIHLLLLSGITVLIVEIAAYRKTRYEHRFRDKSV
Ga0209818_10183521	3300027637	Agricultural Soil	MLWWIGSGLILLWLILLVAQQRGWIHLLLLSGITVLIIEIAAYRKTRYERRLRE
Ga0209818_10909092	3300027637	Agricultural Soil	MLWWIGSGLLVAWLIMLIVHPSGWIHLMLLAGISVLVVQIAAYRKTKSTLRNDN
Ga0209485_11297702	3300027691	Agricultural Soil	MLWWIGSGLLVAWLIMLIVHPSGWIHLMLLAGISVLVVQIAAYRKTKSALRNDN
Ga0209485_12376161	3300027691	Agricultural Soil	DSLMLWWIGSGLLVCWLILLAVHPAGWIHLLLLSGISVLVVQIAAYRKTKASRDIRG
Ga0209461_101122822	3300027750	Agave	MLWWVGSGLLVVWLILFVVHPQGWIHLLLLSGITVLVVQIAAYRKTKAAAKSR
Ga0209177_104734741	3300027775	Agricultural Soil	WIGSGLILLWFILLVAQQRGWIHLLLLSGISVLIVQVAAYRKTRYEHRFRE
Ga0209814_102011282	3300027873	Populus Rhizosphere	MLWWIGSGLILLWLILLVLQQRGWIHLLLLSGISVLIVEIAAYRKTRYEHRFRNKSV
Ga0209814_103126562	3300027873	Populus Rhizosphere	MLWWIGSGLILLWLILLIAQQRGWIHLLLLSGITVLIVQIAAYRKTKYEQGFRE
Ga0209481_105353681	3300027880	Populus Rhizosphere	RRLQVERSALMLWWIGSGLILLWLILLIAQQRGWIHLLLLSGITVLIVQVAAYRKTKYEQGFRE
Ga0209486_102559092	3300027886	Agricultural Soil	MLWWIGSGLLVCWLILLVVHPAGWIHLLLLSGISVLVVQIAAYRKTKASRDIRG
Ga0209486_103607822	3300027886	Agricultural Soil	MLWWIGSGLLVCWLILLAVHPAGWIHLLLLSGISVLVVQIAAYRKTKASRDIRG
Ga0207428_103731502	3300027907	Populus Rhizosphere	MLWWIGSGLILLWFILLVAQQRGWIHLLLLSGITVLIVQVAAYRKTRYEHRFRE
Ga0209382_110032222	3300027909	Populus Rhizosphere	MLWWIGSGLILLWLILLVAHQRGWIYLLLLSGITVLIVQIAAYRKTRYEHRFRDKSV
Ga0268265_100155295	3300028380	Switchgrass Rhizosphere	MLWLIGSGLILLWLILLVAGQRGWIHLLLLSGITVLIVQLAAYRKTRYAHRFRE
Ga0268241_100470742	3300030511	Soil	WWVGSGLVLVWLILFLVHPTGWTHLLLIGGTTMLVVQTAAHRKTKAAMKNRR
Ga0268241_100705342	3300030511	Soil	MLWWVGSGLIAVWLILFLVHPSGWVHLLLIGGSTLLVVQTAAHRKTKAAMKNRR
Ga0268241_101413181	3300030511	Soil	MLWWVGSGLVLIWLILFLVHPTGWTHLLLIGGTTMLVVQTAAHRKTKAAMKNR
Ga0307505_10000005157	3300031455	Soil	MLWWVGSGLLLGWLVMMIFHPKGWMHLLLLAGVTVLVVQIAAHRKTKAARDIRG
Ga0307505_100496752	3300031455	Soil	MLWWIGSGLILLWLILLVAQQRGWIHLLLLSGITVLIVQLAAYRKTRYAHRLRE
Ga0307408_1004157762	3300031548	Rhizosphere	MLWWVGAGLIVVWLLLLVVGQRGWIHIVLLSGITVLVVQLAAYRKTKSVRDIPR
Ga0307408_1007807412	3300031548	Rhizosphere	MLWWIGSGLILLWLILLIAQQRGWIHLLLLSGITVLIVQVAAYRKTKYEQGFRE
Ga0307405_101197091	3300031731	Rhizosphere	MLWWIGAGLIFLWVVLEFFAPRGWIHLLLLSGISVLIVQIAAYRKTKYQRTTSAK
Ga0310907_102650812	3300031847	Soil	MLWLIGSGLVLLWLILLVAGQRGWIHLLLLSGITVLIVQLAAYRKTRYAHRFRE
Ga0307410_111974282	3300031852	Rhizosphere	MLWWVGSGLLLVWLILLVVHPRGWIHLLLLSGISVLVIQIAAYRKTKAAARGR
Ga0307414_112209082	3300032004	Rhizosphere	MLWWIGAGLIFLWVILEFFAPRGWIHLLLLSGICVLIVQIAAYRKTKYQRTTSAK
Ga0310902_102079582	3300032012	Soil	MLWWIGSGLILLWLILLVAQQRGWIHLLLLSGITVLIVQLAAYRKTRYAHRFRE
Ga0310890_106469061	3300032075	Soil	MLWWIGSGLILLWFILLVAQQRGWIHLLLLSGISVLIVQVAAYRKTKYEHTFRE
Ga0315910_100278212	3300032144	Soil	MLWWIGSGLLVGWLIMLIVRPAGWIHLLLLSGISVLVIQTAAYRKTKATMQNRK
Ga0315912_100025035	3300032157	Soil	MLWWIGSGLILLWLILLIAQQRGWIHLLLLSGITVLIVQIAAYRKTKHEHRLRARTRE
Ga0315912_108708422	3300032157	Soil	AERDSLMLWWIGSGLLVGWLIMLIFRPAGWIHLLLLSGISVLVIQTAAYRKTKATMQNRK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F039815

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences