Metagenome / Metatranscriptome Family F040016

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040016
Family Type	Metagenome / Metatranscriptome
Number of Sequences	162
Average Sequence Length	47 residues
Representative Sequence	MLNKTEQSDRAPNANEKPENCYCSALPKGSGLCLPCYTRWL
Number of Associated Samples	90
Number of Associated Scaffolds	162

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	87.04 %
% of genes near scaffold ends (potentially truncated)	71.60 %
% of genes from short scaffolds (< 2000 bps)	87.04 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.17

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.617 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.926 % of family members)
Environment Ontology (ENVO)	Unclassified (46.914 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.963 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 2.90% Coil/Unstructured: 97.10%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.17
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.17
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 162 Family Scaffolds
PF00239	Resolvase	4.94
PF06411	HdeA	1.85
PF01381	HTH_3	1.23
PF13384	HTH_23	1.23
PF02518	HATPase_c	1.23
PF13676	TIR_2	1.23
PF01527	HTH_Tnp_1	1.23
PF03401	TctC	0.62
PF00072	Response_reg	0.62
PF00196	GerE	0.62
PF04392	ABC_sub_bind	0.62
PF00703	Glyco_hydro_2	0.62
PF13579	Glyco_trans_4_4	0.62
PF00486	Trans_reg_C	0.62
PF12307	DUF3631	0.62
PF04347	FliO	0.62
PF02452	PemK_toxin	0.62
PF13683	rve_3	0.62
PF04519	Bactofilin	0.62
PF05876	GpA_ATPase	0.62
PF07508	Recombinase	0.62
PF04545	Sigma70_r4	0.62
PF03807	F420_oxidored	0.62
PF07977	FabA	0.62

COG ID	Name	Functional Category	% Frequency in 162 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	5.56
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	4.94
COG0764	3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase	Lipid transport and metabolism [I]	0.62
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.62
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.62
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.62
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.62
COG3190	Flagellar biogenesis protein FliO	Cell motility [N]	0.62
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	0.62
COG4706	Predicted 3-hydroxylacyl-ACP dehydratase, HotDog domain	Lipid transport and metabolism [I]	0.62
COG5525	Phage terminase, large subunit GpA	Mobilome: prophages, transposons [X]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.62 %
All Organisms	root	All Organisms	49.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.62 %
cellular organisms	root	All Organisms → cellular organisms	48.15 %
Viruses	superkingdom	All Organisms → Viruses	1.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.62 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.15 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	1.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	38.27 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.47 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1.23 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	35.19 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.85 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	1.23 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.62 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	16.05 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.85 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.23 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.23 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.05 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.85 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	1.23 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.23 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.62 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.05 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.85 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.23 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.62 %
Tardibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Tardibacter	0.62 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.62 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.05 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.85 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.23 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.62 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.62 %
Tardibacter chloracetimidivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Tardibacter → Tardibacter chloracetimidivorans	0.62 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.62 %
Bradyrhizobium altum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium altum	0.62 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.05 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.85 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.23 %
Sphingomonas sp. PP-F2F-G114-C0414	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. PP-F2F-G114-C0414	0.62 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	0.62 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.62 %
Tardibacter chloracetimidivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Tardibacter → Tardibacter chloracetimidivorans	0.62 %
Bradyrhizobium altum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium altum	0.62 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10051186	Not Available	1073	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10081702	Not Available	690	Open in IMG/M
3300000955\|JGI1027J12803_100296364	Not Available	603	Open in IMG/M
3300004633\|Ga0066395_10057846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1741	Open in IMG/M
3300004633\|Ga0066395_10641692	Not Available	626	Open in IMG/M
3300005332\|Ga0066388_100497542	Not Available	1855	Open in IMG/M
3300005332\|Ga0066388_101303323	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300005332\|Ga0066388_103259426	All Organisms → cellular organisms → Bacteria → Proteobacteria	829	Open in IMG/M
3300005332\|Ga0066388_103360298	Not Available	817	Open in IMG/M
3300005332\|Ga0066388_103611856	Not Available	789	Open in IMG/M
3300005332\|Ga0066388_104585180	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	703	Open in IMG/M
3300005332\|Ga0066388_105500743	Not Available	642	Open in IMG/M
3300005332\|Ga0066388_108822129	Not Available	500	Open in IMG/M
3300005363\|Ga0008090_15714827	Not Available	533	Open in IMG/M
3300005518\|Ga0070699_100033785	All Organisms → cellular organisms → Bacteria	4420	Open in IMG/M
3300005518\|Ga0070699_100237869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1624	Open in IMG/M
3300005536\|Ga0070697_100129418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2116	Open in IMG/M
3300005713\|Ga0066905_100083017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Tardibacter → Tardibacter chloracetimidivorans	2113	Open in IMG/M
3300005713\|Ga0066905_100556806	All Organisms → cellular organisms → Bacteria → Proteobacteria	963	Open in IMG/M
3300005713\|Ga0066905_101199050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300005713\|Ga0066905_101227251	Not Available	671	Open in IMG/M
3300005713\|Ga0066905_101272856	Not Available	660	Open in IMG/M
3300005713\|Ga0066905_101823119	Not Available	561	Open in IMG/M
3300005764\|Ga0066903_100087627	All Organisms → cellular organisms → Bacteria	4112	Open in IMG/M
3300005764\|Ga0066903_100289652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2577	Open in IMG/M
3300005764\|Ga0066903_100508253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2045	Open in IMG/M
3300005764\|Ga0066903_100735513	Not Available	1748	Open in IMG/M
3300005764\|Ga0066903_101386672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1319	Open in IMG/M
3300005764\|Ga0066903_101746567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1186	Open in IMG/M
3300005764\|Ga0066903_102572503	All Organisms → cellular organisms → Bacteria → Proteobacteria	986	Open in IMG/M
3300005764\|Ga0066903_102582098	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300005764\|Ga0066903_102757187	All Organisms → cellular organisms → Bacteria → Acidobacteria	953	Open in IMG/M
3300005764\|Ga0066903_103632804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	830	Open in IMG/M
3300005764\|Ga0066903_103989032	Not Available	791	Open in IMG/M
3300005764\|Ga0066903_106069923	Not Available	632	Open in IMG/M
3300005764\|Ga0066903_106534033	Not Available	607	Open in IMG/M
3300005764\|Ga0066903_106816376	Not Available	593	Open in IMG/M
3300005764\|Ga0066903_107603376	Not Available	558	Open in IMG/M
3300005764\|Ga0066903_107649793	Not Available	557	Open in IMG/M
3300006028\|Ga0070717_10039064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3860	Open in IMG/M
3300006028\|Ga0070717_11579043	Not Available	595	Open in IMG/M
3300006032\|Ga0066696_10924411	Not Available	555	Open in IMG/M
3300006796\|Ga0066665_10901056	Not Available	685	Open in IMG/M
3300006854\|Ga0075425_101323209	Not Available	816	Open in IMG/M
3300006871\|Ga0075434_100365653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1463	Open in IMG/M
3300006871\|Ga0075434_100614924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1105	Open in IMG/M
3300006904\|Ga0075424_101794758	Not Available	649	Open in IMG/M
3300007076\|Ga0075435_101683928	Not Available	557	Open in IMG/M
3300009156\|Ga0111538_11124183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	993	Open in IMG/M
3300009162\|Ga0075423_11493957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	725	Open in IMG/M
3300010043\|Ga0126380_10320086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium altum	1114	Open in IMG/M
3300010046\|Ga0126384_11767910	Not Available	586	Open in IMG/M
3300010047\|Ga0126382_10197157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1429	Open in IMG/M
3300010047\|Ga0126382_10228634	Not Available	1346	Open in IMG/M
3300010048\|Ga0126373_10942186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	928	Open in IMG/M
3300010048\|Ga0126373_12462597	Not Available	580	Open in IMG/M
3300010048\|Ga0126373_12885621	Not Available	536	Open in IMG/M
3300010320\|Ga0134109_10338458	Not Available	588	Open in IMG/M
3300010361\|Ga0126378_11116860	Not Available	889	Open in IMG/M
3300010361\|Ga0126378_11840743	Not Available	689	Open in IMG/M
3300010366\|Ga0126379_11298130	Not Available	834	Open in IMG/M
3300010366\|Ga0126379_12687776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	595	Open in IMG/M
3300010398\|Ga0126383_10211041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1873	Open in IMG/M
3300010398\|Ga0126383_10326653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1544	Open in IMG/M
3300010398\|Ga0126383_10784547	Not Available	1035	Open in IMG/M
3300010398\|Ga0126383_12436735	Not Available	608	Open in IMG/M
3300010398\|Ga0126383_13067595	Not Available	545	Open in IMG/M
3300010399\|Ga0134127_11274108	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300012200\|Ga0137382_11153234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300012208\|Ga0137376_11758005	Not Available	511	Open in IMG/M
3300012354\|Ga0137366_10708561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300012582\|Ga0137358_10719243	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300012908\|Ga0157286_10371730	Not Available	546	Open in IMG/M
3300012929\|Ga0137404_11946168	Not Available	548	Open in IMG/M
3300012948\|Ga0126375_10116955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1617	Open in IMG/M
3300012948\|Ga0126375_10584948	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300012971\|Ga0126369_10995003	Not Available	926	Open in IMG/M
3300012971\|Ga0126369_11028173	Not Available	912	Open in IMG/M
3300015371\|Ga0132258_10381059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3498	Open in IMG/M
3300016270\|Ga0182036_10872877	Not Available	736	Open in IMG/M
3300016270\|Ga0182036_11582207	Not Available	551	Open in IMG/M
3300016319\|Ga0182033_10913314	Not Available	778	Open in IMG/M
3300016319\|Ga0182033_11002668	Not Available	743	Open in IMG/M
3300016319\|Ga0182033_11006215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	742	Open in IMG/M
3300016319\|Ga0182033_11297349	Not Available	654	Open in IMG/M
3300016319\|Ga0182033_11472534	Not Available	614	Open in IMG/M
3300016319\|Ga0182033_11953706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300016341\|Ga0182035_11231608	Not Available	669	Open in IMG/M
3300016341\|Ga0182035_11972999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300016357\|Ga0182032_10427254	Not Available	1077	Open in IMG/M
3300016357\|Ga0182032_10433678	Not Available	1069	Open in IMG/M
3300016357\|Ga0182032_11896717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300016387\|Ga0182040_11463731	Not Available	579	Open in IMG/M
3300016404\|Ga0182037_10277643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1337	Open in IMG/M
3300016404\|Ga0182037_10944474	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300016445\|Ga0182038_10446260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1094	Open in IMG/M
3300021560\|Ga0126371_10561177	Not Available	1291	Open in IMG/M
3300021560\|Ga0126371_11759938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	742	Open in IMG/M
3300027371\|Ga0209418_1017650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1178	Open in IMG/M
3300027874\|Ga0209465_10566667	Not Available	564	Open in IMG/M
3300027874\|Ga0209465_10669861	Not Available	510	Open in IMG/M
3300028720\|Ga0307317_10115325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	895	Open in IMG/M
3300028799\|Ga0307284_10087058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1152	Open in IMG/M
3300031543\|Ga0318516_10050744	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2257	Open in IMG/M
3300031545\|Ga0318541_10011432	All Organisms → cellular organisms → Bacteria	4002	Open in IMG/M
3300031545\|Ga0318541_10076356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1766	Open in IMG/M
3300031545\|Ga0318541_10201241	Not Available	1102	Open in IMG/M
3300031545\|Ga0318541_10641940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300031549\|Ga0318571_10171549	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300031572\|Ga0318515_10098336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1532	Open in IMG/M
3300031573\|Ga0310915_10346700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1052	Open in IMG/M
3300031668\|Ga0318542_10773347	Not Available	503	Open in IMG/M
3300031681\|Ga0318572_10713539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300031681\|Ga0318572_10849138	Not Available	543	Open in IMG/M
3300031719\|Ga0306917_10030451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3458	Open in IMG/M
3300031719\|Ga0306917_10073640	Not Available	2376	Open in IMG/M
3300031736\|Ga0318501_10736319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300031744\|Ga0306918_10040869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3015	Open in IMG/M
3300031765\|Ga0318554_10140640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1368	Open in IMG/M
3300031768\|Ga0318509_10730295	Not Available	549	Open in IMG/M
3300031770\|Ga0318521_10386150	Not Available	833	Open in IMG/M
3300031771\|Ga0318546_10827746	Not Available	652	Open in IMG/M
3300031782\|Ga0318552_10227046	Not Available	947	Open in IMG/M
3300031796\|Ga0318576_10150433	All Organisms → cellular organisms → Bacteria → Proteobacteria	1085	Open in IMG/M
3300031797\|Ga0318550_10144635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1140	Open in IMG/M
3300031797\|Ga0318550_10430184	Not Available	638	Open in IMG/M
3300031798\|Ga0318523_10471350	Not Available	622	Open in IMG/M
3300031799\|Ga0318565_10657938	Not Available	503	Open in IMG/M
3300031805\|Ga0318497_10729225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	556	Open in IMG/M
3300031835\|Ga0318517_10113506	Not Available	1196	Open in IMG/M
3300031879\|Ga0306919_10088013	All Organisms → cellular organisms → Bacteria	2157	Open in IMG/M
3300031880\|Ga0318544_10389251	Not Available	542	Open in IMG/M
3300031890\|Ga0306925_10029996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5531	Open in IMG/M
3300031890\|Ga0306925_10333205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1630	Open in IMG/M
3300031897\|Ga0318520_10307124	Not Available	956	Open in IMG/M
3300031897\|Ga0318520_10481402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	765	Open in IMG/M
3300031897\|Ga0318520_10615214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. PP-F2F-G114-C0414	676	Open in IMG/M
3300031910\|Ga0306923_10027257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6121	Open in IMG/M
3300031910\|Ga0306923_10061438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4171	Open in IMG/M
3300031910\|Ga0306923_11233266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	797	Open in IMG/M
3300031912\|Ga0306921_12330532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560	Open in IMG/M
3300031912\|Ga0306921_12750957	Not Available	504	Open in IMG/M
3300031942\|Ga0310916_10098108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2350	Open in IMG/M
3300031945\|Ga0310913_10607512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	775	Open in IMG/M
3300031945\|Ga0310913_11085309	Not Available	559	Open in IMG/M
3300031947\|Ga0310909_10155013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1885	Open in IMG/M
3300031947\|Ga0310909_11479085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300031981\|Ga0318531_10078393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1437	Open in IMG/M
3300032001\|Ga0306922_10029414	Not Available	5569	Open in IMG/M
3300032035\|Ga0310911_10069186	All Organisms → cellular organisms → Bacteria → Proteobacteria	1882	Open in IMG/M
3300032035\|Ga0310911_10342103	Not Available	863	Open in IMG/M
3300032039\|Ga0318559_10136381	Not Available	1108	Open in IMG/M
3300032041\|Ga0318549_10507772	Not Available	542	Open in IMG/M
3300032052\|Ga0318506_10383303	Not Available	623	Open in IMG/M
3300032054\|Ga0318570_10526604	Not Available	539	Open in IMG/M
3300032055\|Ga0318575_10508883	Not Available	611	Open in IMG/M
3300032064\|Ga0318510_10163643	Not Available	884	Open in IMG/M
3300032076\|Ga0306924_10599032	Not Available	1247	Open in IMG/M
3300032076\|Ga0306924_11526624	Not Available	707	Open in IMG/M
3300032261\|Ga0306920_100159313	Not Available	3364	Open in IMG/M
3300032261\|Ga0306920_100189098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3073	Open in IMG/M
3300032261\|Ga0306920_103675489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.06%
Host-Associated	Host-Associated	4.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.06%
Plants	Host-Associated → Plants	4.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.37%
Loam	Environmental → Terrestrial → Soil → Loam	24.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	48.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	21.60%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.85%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	20.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.58%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.32%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.23%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.62%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100511864	3300000597	Forest Soil	MLDKTEQSDRAPNQNEKAESCYCSALPKGSGLCLPCYTRWLADRRS*
AF_2010_repII_A001DRAFT_100817022	3300000793	Forest Soil	MKMLDKTEQSDRAPNQNEKAESCYCSALPKGSGLCLPCYTRWLADRRS*
JGI1027J12803_1002963643	3300000955	Soil	VAKMKMVDKTEQSDRAPNANEKPETCYCSALPKGSGLCLPCYTR
Ga0066395_100578462	3300004633	Tropical Forest Soil	MLNKTEQSDRAPNPNEKPENCYCSALPKGSGLCLPCYTRWLAGERPRPGN*
Ga0066395_106416921	3300004633	Tropical Forest Soil	MLNKTEQSDRAPNANEKPEDCYCSALPKGSGLCLPCYTRWL
Ga0066388_1004975424	3300005332	Tropical Forest Soil	MLDKTEQSDRAPNANEKPDNCYCSALPKGSGLCLPCYTRWLADERPRPGN*
Ga0066388_1013033233	3300005332	Tropical Forest Soil	MLNKTDQSDRAPNPNEKPENCYCSALPKGSDLCLPCYTRWLADRRVAR*
Ga0066388_1032594262	3300005332	Tropical Forest Soil	VAEMKMLDKTEQLTELRPQNEKPENCYCSALPKGSGLCLPCYTRWVAAGDSNPPRPG
Ga0066388_1033602983	3300005332	Tropical Forest Soil	VAKMKMLDKTEQSDRAPNPNEKREGCYSSVLPKGSLCLPCYTRWLAGRRS*
Ga0066388_1036118561	3300005332	Tropical Forest Soil	MLNKTEELDRAQNANEKPENCYCSVLPKGSGLCLPCYMRWLAGERPRPGN*
Ga0066388_1045851802	3300005332	Tropical Forest Soil	MLNKTEQSDRAPNPNEKPENCYCSALPKGSGLCLPCYTRWLAGERPRPGKLSA*
Ga0066388_1055007432	3300005332	Tropical Forest Soil	MHDNKQQSDQAPNGNEKAETCYCSALPKGSGLCLPCYTRWLAG
Ga0066388_1088221291	3300005332	Tropical Forest Soil	MLNKTGQSDRSPNADEKPENCYCSALPKGSGLCLPCYTRWLAEQSREYTP*
Ga0008090_157148271	3300005363	Tropical Rainforest Soil	MLNKTEQSDRAPSANEKPEDCYCSALPKGSGPCLPCYTRWLAGERPRPGN*
Ga0070699_1000337855	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MLNKTEQSDRAPNANEKPEDCYCSALPKGSGLCLPCYTRWLAGERPRPGN*
Ga0070699_1002378693	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MLNKTDQSDRAPSPNEKPENCYCAALPKGSDLCLPCYTRWLAGRRVAL*
Ga0070697_1001294183	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MLNKTEQSDRAPNANEKPENCYCSALPKGSGLCLPCYTRWLAGERPRPGN*
Ga0066905_1000830172	3300005713	Tropical Forest Soil	MLNKTEQSDRAPNPNEKPENCYCSALPKGSGLCLPCYTRWLAGERPRPANLST*
Ga0066905_1005568062	3300005713	Tropical Forest Soil	VAEMKMLDKTEQSIRVANPNEKPENCYCSALPKGSGLCLPCYT*
Ga0066905_1011990501	3300005713	Tropical Forest Soil	MLNKTDQSDRAPSPNEKPENCYCSALPKGSDLCLPCYTRWLAGRRVAL
Ga0066905_1012272511	3300005713	Tropical Forest Soil	KMLNKTEQSDRAPNPNEKPENCYCSALPKGSGLCLPCYTRWLAGEHPRPANLST*
Ga0066905_1012728562	3300005713	Tropical Forest Soil	MFNKTEQSDPAPNANEKPENCYCSALPKGSGLCLPCYTRWLAGRRVTDLPRLPS
Ga0066905_1018231192	3300005713	Tropical Forest Soil	MLNKTEQSDRAPNPNEKPENCYCSALPKGSGLCLPCYTRWLRGEHPRPANLST*
Ga0066903_1000876274	3300005764	Tropical Forest Soil	MAEMKMLDKTEQSDRTPNPNEKPESCYCSALPKGSGLCLPCYTRWLADRHS*
Ga0066903_1002896525	3300005764	Tropical Forest Soil	MLNRTEQSDRAQNANEKPENCYCSALPKGSGLCLPSYMRWLAGERPRPGN*
Ga0066903_1005082536	3300005764	Tropical Forest Soil	MLNKTEQSDRAPNANEKQEDCYCSALPKGAGLCLPCYTRWLADSPRLAERPRPGN*
Ga0066903_1007355135	3300005764	Tropical Forest Soil	MLNKTKQSDRAPNANERQEDCYCSALPKGSGLCLPCYTRWLAGS
Ga0066903_1013866723	3300005764	Tropical Forest Soil	MVKRVAEWRRSKMLNKTEQSDRTPNAKEKPEDCYCSALPKGSGLCLPCYTRWLAGERPRPSN*
Ga0066903_1017465674	3300005764	Tropical Forest Soil	MKMLDKNEQSDPAPNQNEKAESCYCSALPKGSGLCLPCYTRWLAGRRS*
Ga0066903_1025725034	3300005764	Tropical Forest Soil	MLNKTEQSDRAPNANEKPEDCYCSALPKGSGLCLPCYTRWLAGERPRP
Ga0066903_1025820981	3300005764	Tropical Forest Soil	MLDKTEQLTELRTQNEKPENCYCSALPKGSGLCLPCYTRWVAAGDSNPPRPG
Ga0066903_1027571872	3300005764	Tropical Forest Soil	MLNKTEQSDRAPNANEKPENCYCSALPKGSGLCLPCYTRWLAGERPCPSN*
Ga0066903_1036328041	3300005764	Tropical Forest Soil	MLNKTEQSDRAPNANEKPENCYCSALPKGSGLCLPCYTRWLAGERPRLGN*
Ga0066903_1039890322	3300005764	Tropical Forest Soil	MKTLDKTEQSERASNPNEKPESCYCSALPKGSALCLPCYTRWLAGRRS*
Ga0066903_1060699232	3300005764	Tropical Forest Soil	SKMLNKTEQSDRAPNANEKPEDCYCSALPKGSGLCLPCYTRWLAGERPRPGN*
Ga0066903_1065340331	3300005764	Tropical Forest Soil	MKMLDKTEQSDRASNPNEKPENCYCSALPKGSGPCLPCYRRWLTSTRSKKW
Ga0066903_1068163763	3300005764	Tropical Forest Soil	EWRRSKMLNKTEQSDRAPNANEKPEDCYCSALPKGSGLCLPCYTRWLAGERPPPRQWST*
Ga0066903_1076033763	3300005764	Tropical Forest Soil	LDKTEQSDRVPNPSNEKPENCYCSALPKGSGLCLTCYTRWLAGRRS*
Ga0066903_1076497932	3300005764	Tropical Forest Soil	MLDKTESDRAANPNEKTENCYCSALPKGSGLCLPCYTRWLA
Ga0070717_100390647	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MNGDARRLKMLDETEQSEGAPIPSEKPESCYCLALPKGSGLCLPCYTRWLASRRS*
Ga0070717_115790431	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAEMKMLDKTEQSVRAPNPNEKPESCYCSALPNGSDPCLACYTRWLARRRS*
Ga0066696_109244111	3300006032	Soil	MAEMKLLDKTEQSDRASNPNEKPQSCYCSALPKGSGLCLPCYTRWL
Ga0066665_109010562	3300006796	Soil	MLNKTDQSDRAPSPNEKPENCYCAALPKGSDLCLPC
Ga0075425_1013232093	3300006854	Populus Rhizosphere	DVKRAAEWRRSKMLNKTEQSDRAPNEKPENCYCSALPKGSGLCLPCYTRWLSGERPRPGN
Ga0075434_1003656533	3300006871	Populus Rhizosphere	MLDKTEQSNRAANPNEKPENCYCSALPKGSGLCLPCYTRWVADRR
Ga0075434_1006149243	3300006871	Populus Rhizosphere	MNGDARRLKMLDKTEQSEGAPIPSEKPESCYCLALPKGSGLCLPCYTRWLASRR
Ga0075424_1017947582	3300006904	Populus Rhizosphere	MLNKTEQSDRAPNANEKPENCYCSALPKGSGLCLPCYTRWLSGERPRPGN*
Ga0075435_1016839281	3300007076	Populus Rhizosphere	GLCCDVKRAAEWRRSKMLNKTEQSDRAPNEKPENCYCSALPKGSGLCLPCYTRWLSGERPRPGN*
Ga0111538_111241831	3300009156	Populus Rhizosphere	MPDKTEPSDRPNANEKPKNCYCSALPKGSGLCLPCYTRWLA
Ga0075423_114939571	3300009162	Populus Rhizosphere	MNGDARRLKMLDETEQSEGAPIPSEKPESCYCLALPKGSGLCLPCYTRWLAA
Ga0126380_103200863	3300010043	Tropical Forest Soil	MLNKTDQSDRAPSPNEKPENCYCSALPKGSDLCLPCY
Ga0126384_117679101	3300010046	Tropical Forest Soil	MLDKTEQSDRAANPNDKPENCYCSALPKGSGPCLPCYTLWLADRDSNPPCLC
Ga0126382_101971571	3300010047	Tropical Forest Soil	MLDKTEQSDRTPNPNEKPESCYCSALPKGSGLCLPCYTRWLAR
Ga0126382_102286341	3300010047	Tropical Forest Soil	MLNETEQSDHAPNANEKRENCYWSALPKGSGLCLPCYTRWLGGERPRPLLRNQLILSDKC
Ga0126373_109421863	3300010048	Tropical Forest Soil	MLGKTEKSDRTSNPNEKPQSCYCSALPKGSGLCLPYYTRWL
Ga0126373_124625971	3300010048	Tropical Forest Soil	MLDKSEQSDRAPNPSNEKPESCYCSALPKGSGLCLT
Ga0126373_128856212	3300010048	Tropical Forest Soil	MKMLDKTEQSIRVANPNEKPENCYCSALPKGSGLCLPCYTRWVADRGLQSS
Ga0134109_103384581	3300010320	Grasslands Soil	MKMLDKTEQLDRTPNPNEKPESCYCSALPKGSGPCLPCYTRWLAADR
Ga0126378_111168603	3300010361	Tropical Forest Soil	MKMVDKTEQSDRAPNPNEKPESCYCSALPKGSLCLPCYTRWLAMSGDP
Ga0126378_118407431	3300010361	Tropical Forest Soil	MLNKTEQSDRAPNANEKPEEDCYCSALPKGSGLCLPCYARWLA
Ga0126379_112981302	3300010366	Tropical Forest Soil	MLNKTEQSDRAPNANEKPEDCYCSALPKGSGLCLPCYTRW
Ga0126379_126877761	3300010366	Tropical Forest Soil	MLDKTEQSDRAANPNEKPENCYCSALPKGSGLCLPCYTRW
Ga0126383_102110411	3300010398	Tropical Forest Soil	MLNKTEQSDRAPDPNEKPENCYCSALPKGSGLCLPCYTRWLAGERPRPANLST*
Ga0126383_103266534	3300010398	Tropical Forest Soil	MLDKSEQSDRAPNPSNEKPESCYCSALPKGSGLCLTCYTRWLAD
Ga0126383_107845474	3300010398	Tropical Forest Soil	MLDKTEQSDRAPNPNEKKPEDCYCSALPKGSGLCLTCYTRWLAD
Ga0126383_124367351	3300010398	Tropical Forest Soil	MNGDARRLKMLDKTEQSEGAPIPSEKPESCYCLALPKGSGLCLP
Ga0126383_130675952	3300010398	Tropical Forest Soil	AEMKMLDKTEQSDRAPNANEKPENCYCSALPKGSGLCLPCYTRWLADERPRPGN*
Ga0134127_112741082	3300010399	Terrestrial Soil	MKMVDKTEQSHRAPNPNEKPERCYCSVLPKGSGLC
Ga0137382_111532342	3300012200	Vadose Zone Soil	MLDKTEQLDQVPIPNEKPESCYCSALPKGSGLCLPCY
Ga0137376_117580052	3300012208	Vadose Zone Soil	MLDKTEQSDQASSPNEKPESCYCSALPKGSGPCLPCYTRWLASRRSKGAMAEEW
Ga0137366_107085612	3300012354	Vadose Zone Soil	MLNKTEQSDRAPNANGKPENCYCSALPKGSGLCLPCYTRWLAD
Ga0137358_107192432	3300012582	Vadose Zone Soil	VAEMKMLDETKQPDPNPNEKPENCYCSALPKGSSLCLPCYT
Ga0157286_103717301	3300012908	Soil	MAEMKMLDKSGEQSCRASNANEKPESCYCSALPKGCSLCLPCYTRWLAGRRS
Ga0137404_119461682	3300012929	Vadose Zone Soil	MLNKAEQSDRVPNPNEKPEDCYCPALPKGSGLCLPCYTRWL
Ga0126375_101169551	3300012948	Tropical Forest Soil	MFDKTEQSDRAPNPNEKPESCYCSALPKGSLCLPCYTRWLAM
Ga0126375_105849483	3300012948	Tropical Forest Soil	MAEMKMLDKTEQSDRTPNPNEKPESCYCSALPKGS
Ga0126369_109950031	3300012971	Tropical Forest Soil	MLNKTEESDRAQNANEKPENCYCSVLPKGSGLCLPCYMRWLAGERPRPGN*
Ga0126369_110281731	3300012971	Tropical Forest Soil	MLDKTEQSIRVANPNEKPENCYCSALPKGSGLCLPCYTRWVA
Ga0132258_103810591	3300015371	Arabidopsis Rhizosphere	MLTKTEQSDRNPQKPENCYCLALPKESGPCLPCYTRWLGTGSLNKAAER*
Ga0182036_108728772	3300016270	Soil	MLNKTEQSDRAPNANEKPEDCYCSALPKGSGLCLPCYTRWLAGERPR
Ga0182036_115822071	3300016270	Soil	MKLLDKTEQSDRAPNQSEKPENCYCSALPKGSGLCLPCYTRWLGGQARVTGLPR
Ga0182033_109133141	3300016319	Soil	RSKMLNKTEESDRAQNANEKPENCYCSVLPKGSGLCLPCYMRWLAGERPHPGN
Ga0182033_110026681	3300016319	Soil	MLDKTEQSDPPNPNEKPENCYCSALPKGSGPCLPCFTRW
Ga0182033_110062151	3300016319	Soil	MLDKTEQSDRTPNENEKPESCYCSALPKGSGLCLPCYTRWL
Ga0182033_112973491	3300016319	Soil	MLDKTEQSDRAPSPNEKPESCYCSALPKGSRPCLPCYTRWLASR
Ga0182033_114725341	3300016319	Soil	MKMVDKTEQSDRAPNPNEKPESCYCSALPKGSLCLPCYTRWLAMSGDPG
Ga0182033_119537061	3300016319	Soil	MKMLDKTEQSDRAANPNEKPENCYCSALPKGSGLCLPCYTRWLIARAFGIT
Ga0182035_112316082	3300016341	Soil	MLNKTEESDRAQNANEKPENCYCSVLPKGSGLCLPCYTRWLADER
Ga0182035_119729992	3300016341	Soil	MLDKTEQSDRTPNPNEKPESCYCSALAKGSGLCLPCYTRWLAGARKQLDQVEGIEEDVLV
Ga0182032_104272543	3300016357	Soil	MAEMKLLDKTEQSDRASNPNEKPESCYCSALPKGSGLCLPC
Ga0182032_104336782	3300016357	Soil	MLNKTEQSDRAPNANEKPENCYCSALPKGSGLCLPCYTRWLAGERPRPGNHAA
Ga0182032_118967171	3300016357	Soil	MKMLDKTEQSDRTPNENEKPESCYCSALPKGSGLCLP
Ga0182040_114637311	3300016387	Soil	MKMVDKTEQSDRAPNPNEKPESCYCSALPKGSLCLPCYTRWLA
Ga0182037_102776431	3300016404	Soil	SVKMLDKTEQSDRTPNPNEKPESCYCSALLKGSLCLPCYTRWLAGRRS
Ga0182037_109444741	3300016404	Soil	MAEMKLLDKTEQSDRASNPNEKPESCYCSALPKGSGLC
Ga0182038_104462601	3300016445	Soil	MKMLDKTEQSVRAANPNEKPESCYCSALPKGSGLCLPCYTRWVADRSLQ
Ga0126371_105611771	3300021560	Tropical Forest Soil	MLNKTEQSDRAPNPNEEPENCYCSALPKGSGLCLPCYTRWLAGERP
Ga0126371_117599383	3300021560	Tropical Forest Soil	MLDKAEQSDRGPNPKEKPESCYCSALPNGSGPCLPCYTRWLA
Ga0209418_10176502	3300027371	Forest Soil	MNGDARRLKMLDKTEQSEGAPIPSEKPESCYCLALPKGSGLCLPCYTRWVADRRVQSSPF
Ga0209465_105666671	3300027874	Tropical Forest Soil	MLNKTEQSGRAPNANEKPEDCYCSALPKGSGLCLPCYTRWL
Ga0209465_106698611	3300027874	Tropical Forest Soil	MKMLDKTEQSVRAANPNEKPESCYCSALPKGSGLCLPCYTRWVADGRL
Ga0307317_101153251	3300028720	Soil	MLNKTEQDGAPNEKGKPENCYCSALPKGSDLCLPCYTQWLRERASPPRQIERVEWP
Ga0307284_100870581	3300028799	Soil	MAEMKMLHKSGEQSDRASNANEKPEGCYCSARPKGCSLCLPCYTRWLAGRRS
Ga0318516_100507442	3300031543	Soil	MLNKTEQSDRAPNPNEKPENCYCSALPKGSGLCLPCYTRWLAVQ
Ga0318541_100114327	3300031545	Soil	MLNRTEQSDRAQNANEKLENCYCSALPKGSGLCLPCYTRWLAGGRAPPPQQLST
Ga0318541_100763562	3300031545	Soil	MLNKTEQSDRAPNANEKPEDCYCSSLPKGSGLCLPCYTRWLAGEHPRPGN
Ga0318541_102012412	3300031545	Soil	MLNKTEESDRAQNANEKPENCYCSVLPKGSGLCLPCYMRWLAGERPHPGN
Ga0318541_106419402	3300031545	Soil	MLDKTEQSDRAPNSNEKPENCYCSALPKGSGPCLPCY
Ga0318571_101715492	3300031549	Soil	VAEMKLLDKTEQSDRAPNQSEKPENCYCSALPKGSGLCLPCY
Ga0318515_100983364	3300031572	Soil	MLNKTEQSDRAPNANEKPENCYCSALPKGSGLCLPCYTRWLAGERHR
Ga0310915_103467001	3300031573	Soil	MLDKTEQSDRTPNPNEKPESCYCSALAKGSGLCLPCYTRWLAG
Ga0318542_107733472	3300031668	Soil	MLDKTEQSDRAPNSNEKPENCYCSALPKGSGPCLPCYT
Ga0318572_107135391	3300031681	Soil	MLDKTEQSDRTPNPNEKPESCYCSALLKGSLCLPC
Ga0318572_108491382	3300031681	Soil	MLNKTEQSDRAPNANEKPENCYCSALPKGSGLCLPC
Ga0306917_100304515	3300031719	Soil	MLNKTEQSDRAPNANEKPENCYCSALPKGSGLCLPCYTRWLAGERPRPGNHAADRRRSAR
Ga0306917_100736404	3300031719	Soil	MLNKTEQSDRAPNANEKPEDCYCSSLPKGSGLCLPCYTRWLAGEHRQLSS
Ga0318501_107363191	3300031736	Soil	MLNKTEQSDRAPNANEKPEDCYCSSLPKGSGLCLPCYTRWLAGEHPR
Ga0306918_100408695	3300031744	Soil	MLDKTEQSDRAPNPNEKPEICYCSALPKGSGLCLPCYTRWLAAGAPKQAAGG
Ga0318554_101406402	3300031765	Soil	NQTVPRVAQNANEKPENCYCSALPKGSGLCLPCYTRWLAGERPRPGN
Ga0318509_107302951	3300031768	Soil	MLDKTEQSDPPNPNEKPENCYCSALAKGSGPCLPCFTRWLAGGA
Ga0318521_103861502	3300031770	Soil	MLDKTEQSDPPNPNEKPENCYCSALAKGSGPCLPCFTRWLA
Ga0318546_108277461	3300031771	Soil	MLNKTEQSDRAPNANEKPENCYCSALPKGSGLCLPCYTR
Ga0318552_102270463	3300031782	Soil	QKMLNKTEQSDRAPNPNEKPENCYCSALPKGSGLCLPCYTRWLAVQ
Ga0318576_101504332	3300031796	Soil	VAEMKMLDKTEQSDRAANPNEKPENCYCSALPKGSGLCL
Ga0318550_101446351	3300031797	Soil	KMLNKTEESDRAQNANEKPENCYCSVLPKGSGLCLPCYMRWLAGESPRPGN
Ga0318550_104301841	3300031797	Soil	MLNKTEESDRAQNANEKPENCYCSVLPKGSGLCLPCYMRWLAGERPH
Ga0318523_104713501	3300031798	Soil	MLNKTEQSDRAPNPNEKPENCYCSALPKGSGLCLPCY
Ga0318565_106579381	3300031799	Soil	MLNKTEQSDRAPNPNEKPENCYCSALPKGSGLCLPC
Ga0318497_107292251	3300031805	Soil	MLDKTEQSVRAANPNEKPESCYCSALPKGSGLCLPCYT
Ga0318517_101135062	3300031835	Soil	MLNKTEQSDRAPNANEKPENCYCSALPKGSGLCLPCYTRWL
Ga0306919_100880135	3300031879	Soil	MKMVDKTEQSDRAANPNEKPESCYCSALPKGSLCLPCYTRWLAMSGDPGKVAIS
Ga0318544_103892511	3300031880	Soil	HATRRSKMLNKTEESDRAQNANEKPENCYCSVLPKGSGLCLPCYMRWLAGERPHPGN
Ga0306925_100299969	3300031890	Soil	MLNKTEQSDRAPNANEKPEDCYCSALPKGSGLCLPCYTRWLAGERPRPGN
Ga0306925_103332051	3300031890	Soil	ATVAEMKMLDKTEQSDRAPNPSNEKPESCYCSALPKGSGLCLPCYTRWLADRRS
Ga0318520_103071241	3300031897	Soil	MKMVDKTEQSDRAPNPNEKPESCYCSVLPKGSLCLPSY
Ga0318520_104814021	3300031897	Soil	MLDKTEQSDRTPNPNEKPESCYCSALAKGSGLCLP
Ga0318520_106152141	3300031897	Soil	MLNKTEQSDRAPNANEKPENCYCSALPKGSGLCLP
Ga0306923_100272577	3300031910	Soil	MLNKTEQSDRAPNANEKPENCYCSALPKGSGLCLPCYTRWLGGQARVTGLPLGSS
Ga0306923_100614381	3300031910	Soil	MLNKTEQSDRAPNANEKPENCYCSALPKGSGLCLPCYTRWLAGERPRPGN
Ga0306923_112332662	3300031910	Soil	MKMLDKTEQSDRAANPNEKPENCYCSALPKGSGLCLPCYTRWLIARA
Ga0306921_123305321	3300031912	Soil	MLDKTEQSDRTPNPNEKPESCYCSALAKGSGLCLPCYT
Ga0306921_127509571	3300031912	Soil	AEWAGIKMLNKTEQSDRAPNPNEKPENCYCSALPKGSGLCLPCYTRWLAGERPRPANLST
Ga0310916_100981086	3300031942	Soil	MLDKTEQSDRAPNSNEKPENCYCSALPKGSGPCLPCYTRWLAGGARKQS
Ga0310913_106075121	3300031945	Soil	MLNKTEQSDRAPNANEKPEDCYCSSLPKGSGLCLPCY
Ga0310913_110853091	3300031945	Soil	MKMVDKTEQSDRAPNPNEKPESCYCSALPKGSLCLPC
Ga0310909_101550136	3300031947	Soil	MLDKTEQSDRVPNPSNEKPESCYCSALPKGSGLCLTCYTRWLADRR
Ga0310909_114790851	3300031947	Soil	MKMLDKIEQSDRAANPNEKPENCYCSALPKGSGLCLPCYTRWLIARA
Ga0318531_100783934	3300031981	Soil	MLNKTEQSDRAPNANEKPEDCYCSSLPKGSGLCLPCYTRW
Ga0306922_100294141	3300032001	Soil	MLNKTEQSDRVPNPDEKPENCYCSALPKGSGLCLPCYTR
Ga0310911_100691865	3300032035	Soil	MLNKTEQSDRAPNPNEKPENCYCSALPKGSGLCLPCYTRWLAGERPRPANLST
Ga0310911_103421031	3300032035	Soil	MKMLDKTEQSDRVPNPNEKPESCYCSALPKGSGLCLPCC
Ga0318559_101363811	3300032039	Soil	MLNKTEQSDRAPNANEKPENCYCSALPKGSGLCLPCYTRWLAGERPR
Ga0318549_105077721	3300032041	Soil	MLDKTEQSDRAPNSNEKPENCYCSALPKGSGPCLPCYTRWLAGGARKQ
Ga0318506_103833032	3300032052	Soil	MKMVDKTEQSDRAPNPNEKPESCYCSALPKGSGLCLPCY
Ga0318570_105266041	3300032054	Soil	LVGRVAEIKMLNKTEQSDRALNPNEKPEDCYCSALPKGSGLCLPCYARWLGGERPRPDK
Ga0318575_105088831	3300032055	Soil	MLNKTEESDRAQNANEKPENCYCSVLPKGSGLCLP
Ga0318510_101636434	3300032064	Soil	MLNRTEQSDRAQNANEKLENCYCSALPKGSGLCLPCYTRWLAGGRAP
Ga0306924_105990321	3300032076	Soil	MKMVDKTEQSDRAPNPNEKPESCYCSALPKGSLCLPCYTRWLAMSGDPGKSRNLVLK
Ga0306924_115266241	3300032076	Soil	MLNKTEQSDRVPNANEKPEDCYCSALPKGSGLCLPCYTRWLAGERPRPGN
Ga0306920_1001593132	3300032261	Soil	MLNKTEQSDRVPNPDEKPENCYCSALPKGSGLCLPCYTRWLAGERPRPGN
Ga0306920_1001890987	3300032261	Soil	MLNKTEQSDRAPNPNEKPENCYCSALPKGSGLCLPCYTRWLAGERPRPGN
Ga0306920_1036754891	3300032261	Soil	MKMLDKIEQSDRAANPNEKPENCYCSALPKGSGLCLPCYTRWVADRGLQSSPPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040016

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences