NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F040236

Metagenome Family F040236

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F040236
Family Type Metagenome
Number of Sequences 162
Average Sequence Length 74 residues
Representative Sequence MKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRRRGQRTTTLETEKKPSS
Number of Associated Samples 140
Number of Associated Scaffolds 162

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 18.83 %
% of genes near scaffold ends (potentially truncated) 25.93 %
% of genes from short scaffolds (< 2000 bps) 68.52 %
Associated GOLD sequencing projects 132
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (84.568 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(13.580 % of family members)
Environment Ontology (ENVO) Unclassified
(32.099 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(52.469 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 60.38%    β-sheet: 0.00%    Coil/Unstructured: 39.62%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 162 Family Scaffolds
PF07969Amidohydro_3 22.22
PF03401TctC 17.28
PF09084NMT1 14.20
PF03781FGE-sulfatase 4.32
PF07908Obsolete Pfam Family 1.23
PF07883Cupin_2 0.62
PF13240zinc_ribbon_2 0.62
PF13594Obsolete Pfam Family 0.62
PF13379NMT1_2 0.62

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 162 Family Scaffolds
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 17.28
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 14.20
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 14.20
COG1262Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domainPosttranslational modification, protein turnover, chaperones [O] 4.32


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms84.57 %
UnclassifiedrootN/A15.43 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2067725004|GPKC_F5V46DG01ANN2IAll Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium524Open in IMG/M
2162886013|SwBSRL2_contig_116888Not Available1000Open in IMG/M
3300000559|F14TC_100343548All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3077Open in IMG/M
3300003319|soilL2_10142573All Organisms → cellular organisms → Bacteria → Acidobacteria2813Open in IMG/M
3300003324|soilH2_10135837All Organisms → cellular organisms → Bacteria9996Open in IMG/M
3300003324|soilH2_10193745All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1376Open in IMG/M
3300003987|Ga0055471_10253807All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300004463|Ga0063356_100200433All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2353Open in IMG/M
3300004463|Ga0063356_104821558Not Available580Open in IMG/M
3300004479|Ga0062595_100195400All Organisms → cellular organisms → Bacteria1244Open in IMG/M
3300004479|Ga0062595_100569344All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium873Open in IMG/M
3300005186|Ga0066676_10637058All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium724Open in IMG/M
3300005294|Ga0065705_10005500All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3818Open in IMG/M
3300005330|Ga0070690_100298288All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1155Open in IMG/M
3300005331|Ga0070670_101241128All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium682Open in IMG/M
3300005333|Ga0070677_10252078Not Available877Open in IMG/M
3300005341|Ga0070691_11077969Not Available505Open in IMG/M
3300005347|Ga0070668_100734521Not Available873Open in IMG/M
3300005353|Ga0070669_102008083All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium505Open in IMG/M
3300005437|Ga0070710_10608652All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium761Open in IMG/M
3300005440|Ga0070705_101194123Not Available626Open in IMG/M
3300005446|Ga0066686_10127874All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1663Open in IMG/M
3300005450|Ga0066682_10127028All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1615Open in IMG/M
3300005456|Ga0070678_101405076All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300005457|Ga0070662_101660539All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium552Open in IMG/M
3300005458|Ga0070681_10107546All Organisms → cellular organisms → Bacteria2729Open in IMG/M
3300005468|Ga0070707_100737678All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium948Open in IMG/M
3300005526|Ga0073909_10085462All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1220Open in IMG/M
3300005529|Ga0070741_10000006All Organisms → cellular organisms → Bacteria728509Open in IMG/M
3300005555|Ga0066692_10928579All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium533Open in IMG/M
3300005558|Ga0066698_10046373All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2726Open in IMG/M
3300005564|Ga0070664_100459393All Organisms → cellular organisms → Bacteria1170Open in IMG/M
3300005568|Ga0066703_10627621All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium624Open in IMG/M
3300005574|Ga0066694_10543852All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium541Open in IMG/M
3300005598|Ga0066706_10097139All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2130Open in IMG/M
3300005617|Ga0068859_100424916All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1425Open in IMG/M
3300005842|Ga0068858_102389462Not Available522Open in IMG/M
3300005843|Ga0068860_100503129All Organisms → cellular organisms → Bacteria1210Open in IMG/M
3300006046|Ga0066652_101540928All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium614Open in IMG/M
3300006175|Ga0070712_100196995All Organisms → cellular organisms → Bacteria1580Open in IMG/M
3300006196|Ga0075422_10572456All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium520Open in IMG/M
3300006755|Ga0079222_10160606All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1293Open in IMG/M
3300006806|Ga0079220_11220451All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium622Open in IMG/M
3300006844|Ga0075428_100070560All Organisms → cellular organisms → Bacteria3819Open in IMG/M
3300006845|Ga0075421_100369922All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1728Open in IMG/M
3300006845|Ga0075421_101587470All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300006845|Ga0075421_101613490All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300006852|Ga0075433_11066469All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium703Open in IMG/M
3300006854|Ga0075425_100008458All Organisms → cellular organisms → Bacteria10911Open in IMG/M
3300006880|Ga0075429_100959433Not Available748Open in IMG/M
3300006903|Ga0075426_10089936All Organisms → cellular organisms → Bacteria2197Open in IMG/M
3300006904|Ga0075424_102415207All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium551Open in IMG/M
3300006914|Ga0075436_100273873All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1206Open in IMG/M
3300006954|Ga0079219_11639053All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300006969|Ga0075419_10495698All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300007255|Ga0099791_10222719All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium892Open in IMG/M
3300009012|Ga0066710_100144539All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3294Open in IMG/M
3300009012|Ga0066710_100717930All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1525Open in IMG/M
3300009094|Ga0111539_11120695All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300009147|Ga0114129_10112676All Organisms → cellular organisms → Bacteria3751Open in IMG/M
3300009147|Ga0114129_10174684All Organisms → cellular organisms → Bacteria2926Open in IMG/M
3300009147|Ga0114129_10742822All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1257Open in IMG/M
3300009147|Ga0114129_11638223All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300009162|Ga0075423_10061126All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3898Open in IMG/M
3300009162|Ga0075423_10449077All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1355Open in IMG/M
3300009176|Ga0105242_11399535All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300010335|Ga0134063_10490811Not Available613Open in IMG/M
3300010362|Ga0126377_10023638All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium5095Open in IMG/M
3300010373|Ga0134128_11428275Not Available762Open in IMG/M
3300010396|Ga0134126_10354347All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1712Open in IMG/M
3300010399|Ga0134127_10937738All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium923Open in IMG/M
3300010399|Ga0134127_11421849All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium765Open in IMG/M
3300010400|Ga0134122_10128235All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2041Open in IMG/M
3300010400|Ga0134122_10515092All Organisms → cellular organisms → Bacteria1086Open in IMG/M
3300010400|Ga0134122_11288817All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium737Open in IMG/M
3300010401|Ga0134121_12198865Not Available588Open in IMG/M
3300010403|Ga0134123_10908064All Organisms → cellular organisms → Bacteria887Open in IMG/M
3300011444|Ga0137463_1084676All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1190Open in IMG/M
3300012022|Ga0120191_10014843Not Available1033Open in IMG/M
3300012198|Ga0137364_10071554All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2374Open in IMG/M
3300012204|Ga0137374_10026033All Organisms → cellular organisms → Bacteria6513Open in IMG/M
3300012204|Ga0137374_10124103All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2368Open in IMG/M
3300012207|Ga0137381_11463300All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium575Open in IMG/M
3300012355|Ga0137369_10084830All Organisms → cellular organisms → Bacteria2643Open in IMG/M
3300012362|Ga0137361_10651184Not Available964Open in IMG/M
3300012477|Ga0157336_1008499All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium747Open in IMG/M
3300012480|Ga0157346_1002180Not Available998Open in IMG/M
3300012499|Ga0157350_1005503All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium917Open in IMG/M
3300012501|Ga0157351_1005921All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium996Open in IMG/M
3300012501|Ga0157351_1035135All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium602Open in IMG/M
3300012505|Ga0157339_1002450All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1255Open in IMG/M
3300012507|Ga0157342_1068146All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium536Open in IMG/M
3300012519|Ga0157352_1003661All Organisms → cellular organisms → Bacteria1332Open in IMG/M
3300012519|Ga0157352_1009281All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1004Open in IMG/M
3300012685|Ga0137397_10195183All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1505Open in IMG/M
3300012916|Ga0157310_10213867All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300012922|Ga0137394_10005043All Organisms → cellular organisms → Bacteria10042Open in IMG/M
3300012923|Ga0137359_10013017All Organisms → cellular organisms → Bacteria6975Open in IMG/M
3300012930|Ga0137407_10024429All Organisms → cellular organisms → Bacteria4605Open in IMG/M
3300012944|Ga0137410_11953300All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium521Open in IMG/M
3300012961|Ga0164302_10199305All Organisms → cellular organisms → Bacteria1230Open in IMG/M
3300013297|Ga0157378_10986446All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium876Open in IMG/M
3300014876|Ga0180064_1067228Not Available734Open in IMG/M
3300015264|Ga0137403_10143270All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2361Open in IMG/M
3300015371|Ga0132258_10069220All Organisms → cellular organisms → Bacteria8177Open in IMG/M
3300015372|Ga0132256_102429319All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300015373|Ga0132257_100064213All Organisms → cellular organisms → Bacteria4132Open in IMG/M
3300015373|Ga0132257_100255553All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2093Open in IMG/M
3300017792|Ga0163161_10178393All Organisms → cellular organisms → Bacteria1627Open in IMG/M
3300017997|Ga0184610_1167442All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium726Open in IMG/M
3300018000|Ga0184604_10158256All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300018028|Ga0184608_10057758All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1545Open in IMG/M
3300018031|Ga0184634_10004112All Organisms → cellular organisms → Bacteria4756Open in IMG/M
3300018052|Ga0184638_1005016All Organisms → cellular organisms → Bacteria4277Open in IMG/M
3300018054|Ga0184621_10109546All Organisms → cellular organisms → Bacteria982Open in IMG/M
3300018061|Ga0184619_10292307All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300018071|Ga0184618_10446928All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium544Open in IMG/M
3300018072|Ga0184635_10008716All Organisms → cellular organisms → Bacteria3454Open in IMG/M
3300018079|Ga0184627_10065729All Organisms → cellular organisms → Bacteria → Proteobacteria1891Open in IMG/M
3300018081|Ga0184625_10038806All Organisms → cellular organisms → Bacteria2359Open in IMG/M
3300019878|Ga0193715_1097937All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium592Open in IMG/M
3300019879|Ga0193723_1020723All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2017Open in IMG/M
3300019879|Ga0193723_1165486All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300019881|Ga0193707_1001514All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium8441Open in IMG/M
3300020003|Ga0193739_1002221All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium5386Open in IMG/M
3300020022|Ga0193733_1060072All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1070Open in IMG/M
3300020060|Ga0193717_1004458All Organisms → cellular organisms → Bacteria7591Open in IMG/M
3300021073|Ga0210378_10131959All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300022756|Ga0222622_10137740All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1558Open in IMG/M
3300022756|Ga0222622_10320068All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1073Open in IMG/M
3300025791|Ga0210115_1107959All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium558Open in IMG/M
3300025900|Ga0207710_10661377Not Available547Open in IMG/M
3300025906|Ga0207699_11415583All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300025908|Ga0207643_10309687All Organisms → cellular organisms → Bacteria984Open in IMG/M
3300025912|Ga0207707_10010756All Organisms → cellular organisms → Bacteria7952Open in IMG/M
3300025912|Ga0207707_10025054All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium5219Open in IMG/M
3300025915|Ga0207693_10218432All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1498Open in IMG/M
3300025917|Ga0207660_10640487All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium866Open in IMG/M
3300025930|Ga0207701_10028375All Organisms → cellular organisms → Bacteria5302Open in IMG/M
3300025930|Ga0207701_10134434All Organisms → cellular organisms → Bacteria2199Open in IMG/M
3300025933|Ga0207706_10157004All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68602000Open in IMG/M
3300025938|Ga0207704_10276301All Organisms → cellular organisms → Bacteria1275Open in IMG/M
3300026118|Ga0207675_100451716All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1273Open in IMG/M
3300027655|Ga0209388_1178231All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium594Open in IMG/M
3300027880|Ga0209481_10210932All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium972Open in IMG/M
3300027909|Ga0209382_11108556All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium817Open in IMG/M
3300027909|Ga0209382_11665966All Organisms → cellular organisms → Bacteria627Open in IMG/M
(restricted) 3300031150|Ga0255311_1073917All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium727Open in IMG/M
3300031170|Ga0307498_10134145Not Available804Open in IMG/M
3300031716|Ga0310813_10185803All Organisms → cellular organisms → Bacteria1695Open in IMG/M
3300031854|Ga0310904_10888048All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium629Open in IMG/M
3300032075|Ga0310890_11400030All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium574Open in IMG/M
3300032122|Ga0310895_10635812All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium550Open in IMG/M
3300034149|Ga0364929_0002596All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium4405Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere13.58%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.64%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment6.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.17%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil5.56%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.32%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil3.09%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.47%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.47%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere2.47%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.85%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.85%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil1.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.85%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.85%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.85%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.23%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.23%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.23%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.23%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.23%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.23%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere1.23%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.23%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.23%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.23%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.62%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.62%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.62%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial0.62%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.62%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.62%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.62%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.62%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.62%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.62%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.62%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.62%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.62%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.62%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.62%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2067725004Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
2162886013Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300003987Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2EnvironmentalOpen in IMG/M
3300003997Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005881Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_202EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300012022Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012477Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.3.yng.040610Host-AssociatedOpen in IMG/M
3300012480Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.yng.040610Host-AssociatedOpen in IMG/M
3300012499Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.yng.030610EnvironmentalOpen in IMG/M
3300012501Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610EnvironmentalOpen in IMG/M
3300012505Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610Host-AssociatedOpen in IMG/M
3300012507Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610Host-AssociatedOpen in IMG/M
3300012519Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610EnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012916Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014876Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200_16_10DEnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017927Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4EnvironmentalOpen in IMG/M
3300017930Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5EnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300019881Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2EnvironmentalOpen in IMG/M
3300020003Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300020060Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025791Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025988Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101 (SPAdes)EnvironmentalOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300034149Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
GPKC_006586302067725004SoilMKPFIRYTALVLAFLFLAGAAFAWFNVLSHENILTNPELKTASGWLTTGLMLLALGMRGWRRRRAEPNSRKEPAHPPV
SwBSRL2_0097.000001402162886013Switchgrass RhizosphereMKPFVRLTALLLAILFLAGAGFAWFDVLTHDNILANSESKTAGGWLLTGLMLLALGLRGWRPRKGPTPNPASESKPSI
F14TC_10034354833300000559SoilMKPFVRITAVILAVMFLFGAGLAWFDVLTHENILTNPELKAATGWLTTGLMLLALGLRGWRRRNAASKTETKQTP*
soilL2_1014257323300003319Sugarcane Root And Bulk SoilMKPFVRYTAFFLAVVFLSGAALVWFDVLTHDNIFTNPELKTAAGWLTTGLMLLALALRGRRRRAEPPAPQN*
soilH2_1013583733300003324Sugarcane Root And Bulk SoilMKPFVRYTAFVLAVVFLSGAALAWFDVLTQDNIFANPELKTAAGWLTTGLMLLALALRGRRRRAQPKSPGE*
soilH2_1019374523300003324Sugarcane Root And Bulk SoilMKPFVRYTAFFLAVVFLSGAALVWFDVLTHDNILTNPELRTAAGWLTTGLMLLALALRGRHRRAEPKPPGE*
Ga0055471_1025380713300003987Natural And Restored WetlandsMKPLVRYTALLLASVFLAGAVAAWVEVLTHENVLQNPQTKIASGWLMTGLMLLALGLRGWRARRAPKSANEQAPR*
Ga0055466_1009926413300003997Natural And Restored WetlandsMKSAVRFVILFFAVLFLAGAAFAWFDVLTHGNLLANPELKFASGWSVTGLMFLGFGLRGWRGRGQIESSDRMPPQHPSA*
Ga0063356_10020043333300004463Arabidopsis Thaliana RhizosphereMKAFVRRTALLLASLFLAGAGLAWFDVLTHENVLANPELKTAGGWLLTGFMLLALGLRGRRPRKGQPAGTARESEPSPWSR*
Ga0063356_10482155813300004463Arabidopsis Thaliana RhizosphereMKPFVRITALFLAILFLAGASFAWFDVLIHENILTNPEVKTASGWLLTGIMLLALGL
Ga0062595_10019540023300004479SoilVKPFVRYTALFLGILFLSGAGFTWVDVLTHDNIFNNPELKIAAGWSMTGLMLLGLALRSRRRAKPRQH*
Ga0062595_10056934423300004479SoilMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRQRGQRTGGLESEKKPL*
Ga0066676_1063705823300005186SoilMTSFVTYTALVLGTLFLSAAVFAWFDVLTHENVLTNPELKIASGWLMTGLMLLALGMRGWRRRRERTAASGTTTERKPSG*
Ga0065705_1000550033300005294Switchgrass RhizosphereMKPFVRLTALLLAILFLAGAGFAWFDVLTHDNILANSESKTAGGWLLTGLMLLALGLRGWRPRKGPTPNPASESKPSI*
Ga0070690_10029828813300005330Switchgrass RhizosphereMKPFVRYTALFLAIIFLSGAAFVWFDVFTHDNVFTNPELKIAAGWLTTGLMLLALGLRGRRRRAEPKLPQS*
Ga0070670_10124112813300005331Switchgrass RhizosphereMKPFVRYTALFLAIVFLSGAAFVWFDVFTHDNVFTNPELKIAAGWLITGLMLLALGLRGRRRRAEPKL
Ga0070677_1025207823300005333Miscanthus RhizosphereVKPFVRYTALFLALVFLTGAAFVWFDVFTHDNVFTNPELKIAAGWLTTGLMLLGLSVRGW
Ga0070691_1107796913300005341Corn, Switchgrass And Miscanthus RhizosphereMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRQRGQRTAGLESEKKTL*
Ga0070668_10073452123300005347Switchgrass RhizosphereMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRQRGQRTAGLESEKKPL*
Ga0070669_10200808323300005353Switchgrass RhizosphereMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGW
Ga0070710_1060865213300005437Corn, Switchgrass And Miscanthus RhizosphereMLFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRQRQADPKPRTEPTRPPA*
Ga0070705_10119412313300005440Corn, Switchgrass And Miscanthus RhizosphereMKPIVRSTILFFAMVFLGGAVFAWFDVLTHDNILTNPELKFATGWLMTGLMFLGLGMRGWRWRKESSPAGGTEKKSS*
Ga0066686_1012787423300005446SoilMTSFVTYTALVLGTLFLSAAGFAWFDVLTHENVLTNPELKIASGWLMTGLMLLALGMRGWRRRRERTAASGTTTERKPSG*
Ga0066682_1012702833300005450SoilMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGMRGWRRRQTDPNSRTEPTRPPA*
Ga0070678_10140507623300005456Miscanthus RhizosphereMKPFVRYTALFLAIIFLSGAAFVWFDVFTHDNVFTNPELKIAAGWLTTGLMLLALGLRGRRRRAEPKLTQS*
Ga0070662_10166053923300005457Corn RhizosphereMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRQRGQR
Ga0070681_1010754623300005458Corn RhizosphereMKPFVRYTAFFLAVVFLTGAALVWFDVLTHDNIFTNPELKTAAGWLTTGLMLLGLALRGRRRGVAPKPPQD*
Ga0070707_10073767823300005468Corn, Switchgrass And Miscanthus RhizosphereMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGMRGWRRRGQRTTTLETEKKPSS*
Ga0073909_1008546213300005526Surface SoilLGILFVAGAAFAWFDVLTHENMLANPELKTAGGWLMTGLMLLALGVRGWRRRQADPKPRTEPTRPPA*
Ga0070741_100000061213300005529Surface SoilMKPFVRYTAFVLAVVFLSGAAFVWFDVLTHDNIFTNPELKTAAGWLTTGLMLLGLALRGRRRGAQPKSPGE*
Ga0066692_1092857923300005555SoilMKPFVRYTALVLGSLFVAGAAFAWFDVLSHENILTNPELKTAGGWLMTGLMLLALGMRGWRRRQTDPNSRTEPTRPP
Ga0066698_1004637353300005558SoilLGNVSMTSFVTYTALVLGTLFLSAAGFAWFDVLTHENVLTNPELKIASGWLMTGLMLLALGMRGWRRRRERTAASGTTTERKPSG*
Ga0070664_10045939323300005564Corn RhizosphereMKPFVRYTALFLAIVFLSGAAFVWFDVFTHDNVFTNPELKIAAGWLTTGLMLLALGLRGRRRRAEPKLPQS*
Ga0066703_1062762123300005568SoilMKPFVRYTALVLGSLFVAGAAFAWFDVLSHENILTNPELKTAGGWLMTGLTLLAVGVRGWRWRGQRTAAEDTEKKPSS*
Ga0066694_1054385223300005574SoilMKPFVRYTALVLGSLFVAGAAFAWFDVLSHENILTNPELKTAGGWLMTGLMLLAVGVRGWRRRQADPNYHTEPTRPPV*
Ga0066706_1009713933300005598SoilMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRRRQTDPNSRTEPTRPPA*
Ga0068859_10042491623300005617Switchgrass RhizosphereMKPIVRSTILFFAMVFLGGAVFAWFDVLTHDNILTNPELKFATGWLMTGLMFLGLGMRGWR*
Ga0068858_10238946213300005842Switchgrass RhizosphereTTTDLSMKPIVRSTILFFAMVFLGGAVFAWFDVLTHDNILTNPELKFATGWLMTGLMFLGLGMRGWRWRKESSPAGGTEKKSS*
Ga0068860_10050312923300005843Switchgrass RhizosphereMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRQRGQRTTAAETAKKASS*
Ga0075294_102190523300005881Rice Paddy SoilMKSAVRFVILFFAVLFLGGAAFAWFDVLTHGNLLANPELKFASGWSVTGLMFLGFGLRGWRGRGQIESSDRMPPQHPSA*
Ga0066652_10154092813300006046SoilRYTALVLGSLFVAGAAFAWFDVLSHENILTNPELKTAGGWLMTGLMLLAVGVRGWRRRQADPNSHTEPTRPPV*
Ga0070712_10019699523300006175Corn, Switchgrass And Miscanthus RhizosphereMKPFVRYTALFLAIIFLSGAAFVWFDVFTHDNVFTNPELKIAAGWLTTGLMLLALGLRGRRRRAEPKLPHS*
Ga0075422_1057245613300006196Populus RhizosphereMKPFVRYTALVLGMLFVAGAAFAWFDVLTHENMLTNPELKTAGGWLMTGLMLLALGVRGWRLRQTDPNSRTERTVR*
Ga0079222_1016060623300006755Agricultural SoilVKPFVRYTALFLALVFLTGAAFVCLDVFTHDNFFSNPELKIAAGWLGTGLMLLALGLRGRRGSAAPKPPQS*
Ga0079220_1122045113300006806Agricultural SoilMKPFVRYTALVLGILFLCGAGFAWFEVLTHENVLNNPELKIAAGWLMTGLMLLGLSVRG
Ga0075428_10007056023300006844Populus RhizosphereMKPFVRYTALVLGMLFVAGAAFAWFDVLTHENMLTNPELKTAGGWLMTGLMLLALGVRGWRRRQTDPNSRTERTVR*
Ga0075421_10036992213300006845Populus RhizosphereMKPFVRFTALILSALFLGGAALAWFDVLTHDNILNNPELKTAGGWLMTGFMLLALGMRGWRRRGQRATAAETEKKSSS*
Ga0075421_10158747023300006845Populus RhizosphereMKPFVRFTALFLAILFLTAAAFAWFDVLTHENILMNPELKIASGWLMTGLMLLALGIRGWRRRREQITTTRTKPEKQSSG*
Ga0075421_10161349023300006845Populus RhizosphereVKPFVRYTALFLGILFLSGAGFTWVDVLTHDNIFNNPELKIAAGWSMTGLMLLGLALRGRRRAKPRQH*
Ga0075433_1106646923300006852Populus RhizosphereMKPFVRFTALILSALFLGGAALAWFDVLTHDNILNNPELKTAGGWLMTGFMLLALGMRGWRRRGQ
Ga0075425_10000845853300006854Populus RhizosphereMKPFVRYTALVLGMLFLCGAGFAWFDVLTHENVLNNPELKIAAGWLMTGLMLLGLSVRGWRGR*
Ga0075429_10095943313300006880Populus RhizosphereMTSFVRYTALVLGMLFLSAAGLAWFDVLTHENVLTNPELKIASGWLMTGLMLLALGMRGWRRRRERTAASGTATQRKPSG*
Ga0075426_1008993623300006903Populus RhizosphereMKPFVRLTALILSALFLGGAALAWFDVLTHDNILNNPELKTAAGWLMTGFMLLALGMRGWRRRGQRTTALETEKKPSS*
Ga0075424_10241520723300006904Populus RhizosphereMKPFVRFTALILSALFLGGAALAWFDVLTHDNILNNPELKTAGGWLMTGFMLLALGMRGWRRRGQRATA
Ga0075436_10027387323300006914Populus RhizosphereVKPFVRYTALVLGILFLCGAGFAWFDVLTHENVLNNPELKIAAGWLMTGLMLLGLSVRGWRGR*
Ga0079219_1163905323300006954Agricultural SoilVRYTALFLALVFLTGAVFVWLDVLTHDNFFTNPELKIAAGWLTTGLMLLALGLRGRRRRAAPKPPQS*
Ga0075419_1049569823300006969Populus RhizosphereMMKPFVRFTALFLAILFLTAAAFAWFDVLTHENILMNPELKIASGWLMTGLMLLALGIRGWRRRREQITTTRTKPEKQSSG*
Ga0099791_1022271923300007255Vadose Zone SoilMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRRRQADPKPRTEPTRPPA*
Ga0066710_10014453943300009012Grasslands SoilMTSFVTYTALVLGTLFLSAAVFAWFDVLTHENVLTNPELKIASGWLMTGLMLLALGMRGWRRRRERTAASGTTTERKPSG
Ga0066710_10071793023300009012Grasslands SoilMKPFVRYTALVLGSLFVAGAAFAWFDVLSHENILTNPELKTAGGWLMTGLMLLAVGVRGWRRRQADPNSHTEPTRPPV
Ga0111539_1112069523300009094Populus RhizosphereMKPFVRFTALILSALFLGGAALAWFDVLTHDNILNNPELKTAGGWLMTGFMLLALGMRGWRRRGQRATAAEIEKKPSS*
Ga0114129_1011267623300009147Populus RhizosphereMMKRFVRFTALFLAILFLTGSGIAWFDVLTHENILTNPELKIASGWLMTGLMLLALGIRGWRRRREQRTMEKLEPDKQSSR*
Ga0114129_1017468443300009147Populus RhizosphereMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRRRGQRTTTLETEKKPSS*
Ga0114129_1074282223300009147Populus RhizosphereMTSFVRYTALVLAVLFLSAAGFAWFDVLTHENVLTNPELKIAGGWLMTGLMLLALGMRGWRRRRERTAASGTATQR
Ga0114129_1163822313300009147Populus RhizosphereMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGMRGWRRRGQRAAALETEKKPSS*
Ga0075423_1006112633300009162Populus RhizosphereMTSFVRYTALVLAVLFLSAAGFAWFDVLTHENVLTNPELKIAGGWLMTGLMLLALGMRGWRRRRERTAASGRATERNPSR*
Ga0075423_1044907713300009162Populus RhizosphereMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRQRGQRTTGLESEKKPL*
Ga0105242_1139953523300009176Miscanthus RhizosphereMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRQRGQRTTAAETAKKPSS*
Ga0134063_1049081113300010335Grasslands SoilLLGNVSMTSFVTYTALVLGTLFLSAAVFAWFDVLTHENVLTNPELKIASGWLMTGLMLLALGMRGWRRRRERTAASGTTTERKPSG*
Ga0126377_1002363843300010362Tropical Forest SoilMKPFVRITAVALAVLFLLGAAWAWFDVLSHNNILTNPELKSATGWLMTGLMFLALALRGWRKRGKPTTATPPERKSV*
Ga0134128_1142827523300010373Terrestrial SoilMKPFVRYTAFFLAVVFLSGAALVWFDVLTHDNIFTNPELKTAAGWLTTGLMLLALAMRGRRRRAEPKPPQN*
Ga0134126_1035434723300010396Terrestrial SoilVKPFVRYTALFLALVFLTGAAFVCLDVFTHDNFFSNPELKIAAGWLSTGLMLLALGLRGRRGSAAPKPPQS*
Ga0134127_1093773813300010399Terrestrial SoilILFLAGAGFAWFDVLTHDNILANSESKTAGGWLLTGLMLLALGLRGWRPRKGQTPNPASESRPSV*
Ga0134127_1142184923300010399Terrestrial SoilMKPFVRYTALVLGILFVAAAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRQRQTDPNSRTGRTRPLV*
Ga0134122_1012823523300010400Terrestrial SoilMKPIVRSTILFFAIVFLGGAVFAWFDVLTHDNILTNPELKFATGWLMTGLMFLGLGMRGWRWRKESSPAVGTEKKSS*
Ga0134122_1051509223300010400Terrestrial SoilMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGMRGWRQRGQRTTAAETAKKASS*
Ga0134122_1128881723300010400Terrestrial SoilMKSFVRITALFLAILFLAGASFAWFDVLIHENILTNPEVKTAGGWLLTGIMLLALGLRGWRPRKGQTPNPASESRPSV*
Ga0134121_1219886513300010401Terrestrial SoilMKPIVRSTILFFAIVFLGGAVFAWFDVLTHDNILTNPELKFATGWLMTGLMFLGLGMRGWRWRKESSPAGGTEKKSS*
Ga0134123_1090806423300010403Terrestrial SoilMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRQRG*
Ga0137463_108467623300011444SoilAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRQRQADPKPRTEPTRPPA*
Ga0120191_1001484313300012022TerrestrialLRLVIDPKRETRNATKTGSMKPFVRITALVLAILFLIGAGFVWFDVLSHENILANPELKIAIGWLMTGLMLLALGMRGWRRRREQITTTRTTPEKQSSG*
Ga0137364_1007155423300012198Vadose Zone SoilMKPFVRYTALVLGSLFVAGAAFAWFDVLSHENILTNPELKTAGGWLMTGLMLLAVGVRGWRRRQADPNSHTEPTRPPV*
Ga0137374_1002603313300012204Vadose Zone SoilMKPFVRIAALLLAAMFLTAAGFAWFDVLTHENVLTNPELKIASGWLMTGLMLLALGMRGWRRRRERTAASGTTTERKPSG*
Ga0137374_1012410333300012204Vadose Zone SoilMKPFVRIAALLLAAMFLTAAGFAWFDVLTHENMLTSPELKIAGGWLMTGLMLLALGIRGWRRRRERITGGKTHPPKQSSG*
Ga0137381_1146330013300012207Vadose Zone SoilMTSFVRYTALVLGTLFLSAAGFAWFDVLTHENVLTNPELKIASGWLMTGLMLLALGMRGWRRRRERTAASGTTTERKPS
Ga0137369_1008483023300012355Vadose Zone SoilMKPFVRIAALSLAAMFLTAAGFAWFDVLTHENILTNPELKIAGGWLMTGLMLLALGIRGWRRRREQTTAEKTHPAKQSSG*
Ga0137361_1065118413300012362Vadose Zone SoilMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGMRGSRRRGQRTTTLETEKKPSS*
Ga0157336_100849923300012477Arabidopsis RhizosphereMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRRRQTDPNSRTGRTRPLV*
Ga0157346_100218023300012480Arabidopsis RhizosphereMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRRRQTDPNSRTERTRPLI*
Ga0157350_100550323300012499Unplanted SoilMKPFVRYTALVLGILFVAAAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRRRQTDPNSRTGRTRPLV*
Ga0157351_100592123300012501Unplanted SoilMKPFVRYTALFLAIVFLSGAAFVWFDVFTHDNVFTNPELKIAAGWLTTGLMLLALGLRGRRRR
Ga0157351_103513513300012501Unplanted SoilMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRQRGQRTTAAETAKKPSP*
Ga0157339_100245023300012505Arabidopsis RhizosphereMVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRRRQTDPNSRTGRTRPLV*
Ga0157342_106814623300012507Arabidopsis RhizosphereMKPFVRYTALVLGIVFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRRRQTDPNS
Ga0157352_100366123300012519Unplanted SoilMKPFVRYTALFLAIVFLSGAAFVWFDVFTHDNVFTNPELKIAAGWLTTGLMLLALGLRGRRRRSEPKLPQS*
Ga0157352_100928123300012519Unplanted SoilMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRQRQTDPNSRTGRTRPLV*
Ga0137397_1019518323300012685Vadose Zone SoilMKPLVRFTALILSALFLGGAALAWFDVLTHDNILSNPELKTAGGWLMTGFMLLALGMRGWRRRGQRATAAETEKKPSS*
Ga0157310_1021386723300012916SoilVKPFVRYTALFLALVFLTGAAFVCLDVFTHDNFFSNPELKIAAGWLTTGLMLLALGLRGRRRRAEPKLTQS*
Ga0137394_1000504323300012922Vadose Zone SoilMKPFVRFTALILSALFLGGAALAWFDVLTHDNILSNPELKTAGGWLMTGFMLLALGMRGWRRRGQRATAAETEKKPSS*
Ga0137359_1001301773300012923Vadose Zone SoilMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGMLGWRRRGQRTTTLETEKKPSS*
Ga0137407_1002442913300012930Vadose Zone SoilMTSFVTYTALVLGTLFLSAAGFAWFDVLTHENVLTNPELKIASGWLMTGLMLLALGMRGWRRRRER
Ga0137410_1195330013300012944Vadose Zone SoilMKPFVRYTALVLGIVFVAAAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVR
Ga0164302_1019930523300012961SoilMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGMRGWRQRGQRTTAAETAKKPSS*
Ga0157378_1098644623300013297Miscanthus RhizosphereMKPIVRSTILLFAMVFLGGAVFAWFDVLTHDNILTNPELKFATGWLMTGLMFLGLGMRGWRWRQKSSPAAGAEK
Ga0180064_106722813300014876SoilMKPIVRSTILLFAMVFLGGAVFAWFDVLTHDNILTNPELKFATGWLMTGLMFLGLGMRGWRWRQKSSPAAGAEKKTSY*
Ga0137403_1014327023300015264Vadose Zone SoilMKPFVRYTALVLGILFVAGAAFAWFDVLTHKNILTNPELKTAGGWLMTGLMLLALGVRGWRRRQADPKPRTEPTRPPA*
Ga0132258_1006922063300015371Arabidopsis RhizosphereMKPFVRYTALVLGILFLCGAGFAWFEVLTHENVLNNPELKIAAGWLMTGLMLLGLSVRGWRGR*
Ga0132256_10242931923300015372Arabidopsis RhizosphereFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGMRGWRQRGQRTAGLESEKKPL*
Ga0132257_10006421353300015373Arabidopsis RhizosphereMKPFVRYTSLVLGILFLSGAAFAWFDVLTHENIVKNPELKVASGWLMTSLMLLGLSLRGWRGRKRNANSTSDPA
Ga0132257_10025555313300015373Arabidopsis RhizosphereAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGMRGWRQRGQRTAGLESEKKPL*
Ga0163161_1017839323300017792Switchgrass RhizosphereMKPFVRYTALVLGILFVAGAAFAWFDVLTNENILTNPELKTAGGWLMTGLMLLALGVRGWRQRGQRTAGLESEKKPL
Ga0187824_1026286423300017927Freshwater SedimentMKPIVRFMILLFAVLFLGGAAFAWFDVMTHENMLANPELKFASGWSMTGLMFLGLGVRGWRRRGRSESIDPVPPQRPSA
Ga0187825_1000745933300017930Freshwater SedimentMILLFAVVFLGGAAFAWFDVMTHENMLANPELKFASGWSMTGLMFLGLGVRGWRRRGRSESIDPVPPQRPSA
Ga0184610_116744213300017997Groundwater SedimentMKPFVRITAVVFAVLFLLGAGLAWLDVLTRENIIANPELKSATGWLMTGLMFLALGLRGWRRRQRDNST
Ga0184604_1015825613300018000Groundwater SedimentMKPFVRIAVLSLVVMFITVAVFAWFDVLTHENVLTNPELKIAGGWLMTGLMLLALGIRGWHRRREQTTAKKTQPERQSSG
Ga0184608_1005775813300018028Groundwater SedimentMKPFVRIAALSLAAMFLTAAGFAWFDVLTHENVLTNPELKIASGWLMTGLMLLALGIRGWRRRREQTTAKKTQPERQSSG
Ga0184634_1000411213300018031Groundwater SedimentMKPFVKITAVVLAVLFLLGAGLAWLDVLTHENILVNPELKSATGSLMTGLMFLALGLRGWRRRKRDNSE
Ga0184638_100501663300018052Groundwater SedimentMKPFVRITAVVLAVLFLLGAGLAWLDVLTHENIIANPELKSATGWLLTGFMFLALGLRGWRRRKPDNSP
Ga0184621_1010954613300018054Groundwater SedimentMKPFVRIAALSLSVMFITAAAFAWFDVLTHENVLTNPELKIAGGWLMTGLMLLALGIRGWRRRREQTTAKKTQPERQSSG
Ga0184619_1029230713300018061Groundwater SedimentMKPFVRIAALLLAAMFLTAAGFAWFDVLTHENVLTNPELKIAGGWLMTGLMLLALGIRGWRRRREQTTAKKTQPERQSSG
Ga0184618_1044692813300018071Groundwater SedimentMKPFVRYTALVLGILFVAGAAFAWFDVLSHENILTTPELKTAGGWLMTGLMLLALGVRGWRRRQADPKPRTEPTRPPA
Ga0184635_1000871653300018072Groundwater SedimentMKPFVRYTALVLGILFVLGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRQRGQRTTAAETEKKPSS
Ga0184627_1006572933300018079Groundwater SedimentRITAVVLAVLFLLGAGLAWLDVLTHENILVNPELKSATGSLMTGLMFLALGLRGWRRRKRDNSE
Ga0184625_1003880633300018081Groundwater SedimentMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLILLALGVRGWRRRGQRTTAAETAKKPSS
Ga0193715_109793723300019878SoilLFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGMRGWRRRQTDPNSRTEPTRPPA
Ga0193723_102072343300019879SoilMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGMRG
Ga0193723_116548623300019879SoilLFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRQRGQRTTAAETAKKPSS
Ga0193707_100151493300019881SoilMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRRRQADPKPRTEPTRPPA
Ga0193739_100222123300020003SoilMKPFVRITTVVLAVLFLLGAGLAWLDVLTHKNILTNPELKSATGWLMTGLMFLALALRGWRRRKRYNST
Ga0193733_106007223300020022SoilMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGMRGWRRRQTDPNSRTEPTRPPA
Ga0193717_100445823300020060SoilMKPIVRSTILLFAIVFLGGAVFAWFDVLTHDNILTNPELKFATGWLMTGLMFLGLGTRGWRWRKESRPAIGTEKKSS
Ga0210378_1013195923300021073Groundwater SedimentPFVRIAALSLAAMFLTAAGFAWFDVLTHENVLTNPELKIAGGWLMTGLMLLALGIRGWRRRREQTTAKKTQPERQSSG
Ga0222622_1013774033300022756Groundwater SedimentMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRQRGQRT
Ga0222622_1032006813300022756Groundwater SedimentFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRQRQADPKPRTEPTRPPA
Ga0210115_110795913300025791Natural And Restored WetlandsMKPLVRYTALLLASVFLAGAVAAWVEVLTHENVLQNPQTKIASGWLMTGLMLLALGLRGWRARRAPKSANEQAPR
Ga0207710_1066137713300025900Switchgrass RhizosphereMKPFVRYTALFLAIIFLSGAAFVWFDVFTHDNVFTNPELKIAAGWLTTGLMLLALGLRGRRRRAEPKLTQS
Ga0207699_1141558313300025906Corn, Switchgrass And Miscanthus RhizosphereFVRYTALFLAIIFLSGAAFVWFDVFTHDNVFTNPELKIAAGWLTTGLMLLALGLRGRRRRAEPKLPQS
Ga0207643_1030968733300025908Miscanthus RhizosphereMKPIVRSTILFFAMVFLGGAVFAWFDVLTHDNILTNPELKFATGWLMTGLMFLGLGMRGWRWRKESSPAGGTEKKSS
Ga0207707_1001075643300025912Corn RhizosphereMKPFVRYTAFFLAVVFLSGAALVWFDVLTHDNIFTNPELKTAAGWLTTGLMLLALALRGWRHRAEPKPPGE
Ga0207707_1002505463300025912Corn RhizosphereMKPFVRYTAFFLAVVFLTGAALVWFDVLTHDNIFTNPELKTAAGWLTTGLMLLGLALRGRRRGVAPKPPQD
Ga0207693_1021843223300025915Corn, Switchgrass And Miscanthus RhizosphereMKPFVRYTALFLAIIFLSGAAFVWFDVFTHDNVFTNPELKIAAGWLTTGLMLLALGLRGRRRRAEPKLPHS
Ga0207660_1064048713300025917Corn RhizosphereLLASLFLAGAGLAWFDVLTHENVLANPELKTAGGWLLTGFMLLALGLRGRRPRKGQPAGTARESEPSPWSR
Ga0207701_1002837513300025930Corn, Switchgrass And Miscanthus RhizosphereMKPFVRYTALFLAIVFLSGAAFVWFDVFTHDNVFTNPELKIAAGWLMTGLMLLGLSVRGWRG
Ga0207701_1013443413300025930Corn, Switchgrass And Miscanthus RhizosphereMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRQRGQRTTAAETAKKP
Ga0207706_1015700413300025933Corn RhizosphereMKPFVRYTALVLGILFVAAAAFVWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRQRGQRTTGLESEKKPL
Ga0207704_1027630123300025938Miscanthus RhizosphereMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRQRGQRTAGLESEKKPL
Ga0208141_103093013300025988Rice Paddy SoilMKSAVRFVILFFAVLFLAGAAFAWFDVLTHGNLLANPELKFASGWSVTGLMFLGFGLRGWRGRGQIESSDRMPPQHP
Ga0207675_10045171613300026118Switchgrass RhizosphereMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILPNPELKTAGGWLMTGLMLLALGMRG
Ga0209388_117823113300027655Vadose Zone SoilMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGMRGW
Ga0209481_1021093223300027880Populus RhizosphereMKPFVRYTALVLGMLFVAGAAFAWFDVLTHENMLTNPELKTAGGWLMTGLMLLALGVRGWRRRQTDPNSRTERTVR
Ga0209382_1110855613300027909Populus RhizosphereMKPFVRFTALILSALFLGGAALAWFDVLTHDNILNNPELKTAGGWLMTGFMLLALGMRGWRRRGQRATAAETEKKSSS
Ga0209382_1166596623300027909Populus RhizosphereMKPFVRFTALFLAILFLTAAAFAWFDVLTHENILMNPELKIASGWLMTGLMLLALGIRGWRRRREQITTTRTKPEKQSSG
(restricted) Ga0255311_107391723300031150Sandy SoilMTALLLAILFLAGAAFAWFDVLTHDNILANSESKTAGGWLLTGLMLLALGMRGWRPRKGQTPNPASESKPSV
Ga0307498_1013414513300031170SoilMKPFVRYTALVLGILFVAGAAFAWFDVLTHENILTNPELKTAGGWLMTGLMLLALGVRGWRQRGQRTTAAET
Ga0310813_1018580323300031716SoilMKPFVRYTVFFLAVVFLSGAALVWFDVLTHDNIFTNPELKTAAGWLTTGLMLLGLALRGRRSRAEPKPPQN
Ga0310904_1088804823300031854SoilMKAFVRRTALLLASLFLAGAGLAWFDVLTHENVLANPELKTAGGWLLTGFMLLALGLRGRRPRKGQPAGTARESEPSPWSR
Ga0310890_1140003013300032075SoilMKPFVRYTALVLGMLFVAGAAFAWFDVLTHENMLTNPELKTAGGWLMTGLMLLALGVRGWRRRQTDPNSRMERTRPLT
Ga0310895_1063581223300032122SoilMKPFVRYTALVLGILFVAGAAFAWFDVLTHENMLANPELKTAGGWLMTGLMLLALGVRGWRRRQADPKPRTEPTRPPA
Ga0316620_1107964023300033480SoilMKPIVRFMILFFAVLFLGGAAFAWFDVMTHENMLANPELKFASGWSMTGLMFLGLGVRGWRRRGRSESIDPVPPQRPSA
Ga0316624_1228788823300033486SoilMKPIVRFMILLFAVLFLGGAAFAWFDVMTHENMLANPELKFASGWSMTGLMFLGLGVRGWRRRGQSESIDPVPPQRPSA
Ga0316628_10349691923300033513SoilKPIVRFMILFFAVLFLGGAAFAWFDVMTHENMLANPELKFASGWSMTGLMFLGLGVRGWRRRGQRESIDPVPPQRPSA
Ga0364929_0002596_1011_12473300034149SedimentMKPIVRSTILLFAMVFLGGAVFAWFDVLTHDNILTNPELKFATGWLMTGLMFLGLGMRGWRWRQKSSPAAGAEKKTSY


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