Metagenome / Metatranscriptome Family F040270

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040270
Family Type	Metagenome / Metatranscriptome
Number of Sequences	162
Average Sequence Length	42 residues
Representative Sequence	SLTKSQVGQAVSGSNFREDVNANGTISATDVALVKSDVGTALPP
Number of Associated Samples	91
Number of Associated Scaffolds	162

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.62 %
% of genes near scaffold ends (potentially truncated)	96.91 %
% of genes from short scaffolds (< 2000 bps)	90.12 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.247 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (31.482 % of family members)
Environment Ontology (ENVO)	Unclassified (35.802 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.469 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 2.78% Coil/Unstructured: 97.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 162 Family Scaffolds
PF00404	Dockerin_1	38.89
PF13365	Trypsin_2	2.47
PF00082	Peptidase_S8	1.85
PF13186	SPASM	1.23
PF00533	BRCT	1.23
PF13507	GATase_5	1.23
PF13302	Acetyltransf_3	1.23
PF12345	DUF3641	1.23
PF12698	ABC2_membrane_3	0.62
PF01434	Peptidase_M41	0.62
PF00106	adh_short	0.62
PF08843	AbiEii	0.62
PF17164	DUF5122	0.62
PF13418	Kelch_4	0.62
PF13432	TPR_16	0.62
PF00127	Copper-bind	0.62
PF00571	CBS	0.62
PF05258	DciA	0.62
PF13570	PQQ_3	0.62
PF10988	DUF2807	0.62
PF12895	ANAPC3	0.62
PF01595	CNNM	0.62
PF10711	DUF2513	0.62
PF13428	TPR_14	0.62
PF07589	PEP-CTERM	0.62
PF02700	PurS	0.62
PF13229	Beta_helix	0.62
PF07676	PD40	0.62
PF01344	Kelch_1	0.62
PF00933	Glyco_hydro_3	0.62
PF02687	FtsX	0.62
PF00006	ATP-synt_ab	0.62
PF02597	ThiS	0.62
PF01797	Y1_Tnp	0.62

COG ID	Name	Functional Category	% Frequency in 162 Family Scaffolds
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	0.62
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	0.62
COG1828	Phosphoribosylformylglycinamidine (FGAM) synthase, PurS subunit	Nucleotide transport and metabolism [F]	0.62
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.62
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.62
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	0.62
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.62
COG5512	Predicted nucleic acid-binding protein, contains Zn-ribbon domain (includes truncated derivatives)	General function prediction only [R]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.25 %
Unclassified	root	N/A	19.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.25 %
Unclassified	root	N/A	19.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.25 %
Unclassified	root	N/A	19.75 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	55.56 %
Unclassified	root	N/A	19.75 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.47 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	55.56 %
Unclassified	root	N/A	19.75 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.47 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	35.80 %
Unclassified	root	N/A	19.75 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	5.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.47 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.62 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	35.19 %
Unclassified	root	N/A	19.75 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	4.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.47 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	0.62 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.62 %
unclassified Spartobacteria	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	35.19 %
Unclassified	root	N/A	19.75 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	3.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.47 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	1.23 %
Spartobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	0.62 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.62 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	0.62 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	35.19 %
Unclassified	root	N/A	19.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.47 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	1.85 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1.85 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.23 %
unclassified Opitutaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae	0.62 %
Spartobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	0.62 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	0.62 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	35.19 %
Unclassified	root	N/A	19.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.47 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	1.85 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1.23 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.23 %
Opitutaceae bacterium TAV1	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TAV1	0.62 %
Spartobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	0.62 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100274706	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1571	Open in IMG/M
3300005167\|Ga0066672_10426949	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300005174\|Ga0066680_10617489	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	677	Open in IMG/M
3300005176\|Ga0066679_10075487	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2002	Open in IMG/M
3300005176\|Ga0066679_10490010	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300005176\|Ga0066679_10845580	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	581	Open in IMG/M
3300005176\|Ga0066679_10988611	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TAV1	525	Open in IMG/M
3300005177\|Ga0066690_10424567	Not Available	901	Open in IMG/M
3300005177\|Ga0066690_10723043	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	656	Open in IMG/M
3300005445\|Ga0070708_101825781	Not Available	564	Open in IMG/M
3300005536\|Ga0070697_100114773	All Organisms → cellular organisms → Bacteria	2248	Open in IMG/M
3300005536\|Ga0070697_100147229	Not Available	1983	Open in IMG/M
3300005536\|Ga0070697_100671086	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300005536\|Ga0070697_100885852	Not Available	791	Open in IMG/M
3300005536\|Ga0070697_101342112	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300005556\|Ga0066707_10188848	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300005556\|Ga0066707_10214662	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1246	Open in IMG/M
3300005557\|Ga0066704_10128524	Not Available	1686	Open in IMG/M
3300005557\|Ga0066704_10313717	Not Available	1058	Open in IMG/M
3300005559\|Ga0066700_10060094	All Organisms → cellular organisms → Bacteria	2370	Open in IMG/M
3300005559\|Ga0066700_10984218	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	556	Open in IMG/M
3300005568\|Ga0066703_10757062	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300005569\|Ga0066705_10440028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	817	Open in IMG/M
3300005598\|Ga0066706_10345654	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1178	Open in IMG/M
3300005598\|Ga0066706_10417283	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1068	Open in IMG/M
3300005598\|Ga0066706_10988157	Not Available	649	Open in IMG/M
3300006059\|Ga0075017_101467296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300006173\|Ga0070716_100757001	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	748	Open in IMG/M
3300006796\|Ga0066665_10875264	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	699	Open in IMG/M
3300006796\|Ga0066665_11647560	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300006797\|Ga0066659_10134679	All Organisms → cellular organisms → Bacteria	1734	Open in IMG/M
3300006797\|Ga0066659_11938470	Not Available	501	Open in IMG/M
3300006800\|Ga0066660_10088218	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2159	Open in IMG/M
3300006800\|Ga0066660_10137561	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1792	Open in IMG/M
3300006800\|Ga0066660_10612317	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300006800\|Ga0066660_10663926	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	863	Open in IMG/M
3300006800\|Ga0066660_10853640	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	742	Open in IMG/M
3300006800\|Ga0066660_11356244	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300006954\|Ga0079219_12245909	Not Available	526	Open in IMG/M
3300009012\|Ga0066710_100259852	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2518	Open in IMG/M
3300009012\|Ga0066710_100399800	All Organisms → cellular organisms → Bacteria	2047	Open in IMG/M
3300009012\|Ga0066710_100609792	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1656	Open in IMG/M
3300009012\|Ga0066710_101157318	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1197	Open in IMG/M
3300009012\|Ga0066710_101170744	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1190	Open in IMG/M
3300009012\|Ga0066710_101682721	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300009012\|Ga0066710_104082632	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300009088\|Ga0099830_10101152	All Organisms → cellular organisms → Bacteria	2152	Open in IMG/M
3300009088\|Ga0099830_11567158	Not Available	549	Open in IMG/M
3300009089\|Ga0099828_10035799	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4036	Open in IMG/M
3300009090\|Ga0099827_11870656	Not Available	523	Open in IMG/M
3300009137\|Ga0066709_100586727	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1585	Open in IMG/M
3300009137\|Ga0066709_104658520	Not Available	502	Open in IMG/M
3300010304\|Ga0134088_10654097	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525	Open in IMG/M
3300010401\|Ga0134121_12483181	Not Available	560	Open in IMG/M
3300010880\|Ga0126350_12149222	Not Available	636	Open in IMG/M
3300011269\|Ga0137392_10352711	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300011269\|Ga0137392_11513605	Not Available	530	Open in IMG/M
3300011269\|Ga0137392_11580934	Not Available	514	Open in IMG/M
3300012096\|Ga0137389_11456571	Not Available	580	Open in IMG/M
3300012189\|Ga0137388_10857111	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300012189\|Ga0137388_11578052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300012189\|Ga0137388_11702802	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300012202\|Ga0137363_10666412	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300012202\|Ga0137363_10844662	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	777	Open in IMG/M
3300012202\|Ga0137363_11391870	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	591	Open in IMG/M
3300012203\|Ga0137399_10152661	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1846	Open in IMG/M
3300012203\|Ga0137399_10375635	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1183	Open in IMG/M
3300012203\|Ga0137399_10377462	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1180	Open in IMG/M
3300012203\|Ga0137399_10409788	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300012205\|Ga0137362_10714258	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	861	Open in IMG/M
3300012205\|Ga0137362_11718695	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	514	Open in IMG/M
3300012206\|Ga0137380_11619307	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300012207\|Ga0137381_11163754	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	663	Open in IMG/M
3300012208\|Ga0137376_10534758	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1016	Open in IMG/M
3300012209\|Ga0137379_10170572	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2088	Open in IMG/M
3300012285\|Ga0137370_10883087	Not Available	553	Open in IMG/M
3300012351\|Ga0137386_11086247	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	565	Open in IMG/M
3300012361\|Ga0137360_10136358	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1927	Open in IMG/M
3300012361\|Ga0137360_10440902	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1102	Open in IMG/M
3300012362\|Ga0137361_10020548	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	5020	Open in IMG/M
3300012362\|Ga0137361_10539361	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1071	Open in IMG/M
3300012362\|Ga0137361_10685524	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300012362\|Ga0137361_10973185	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	767	Open in IMG/M
3300012362\|Ga0137361_11420501	Not Available	617	Open in IMG/M
3300012582\|Ga0137358_10679225	Not Available	689	Open in IMG/M
3300012917\|Ga0137395_10656905	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	758	Open in IMG/M
3300012918\|Ga0137396_10067415	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2494	Open in IMG/M
3300012918\|Ga0137396_10258391	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1285	Open in IMG/M
3300012918\|Ga0137396_10787932	Not Available	699	Open in IMG/M
3300012918\|Ga0137396_10891191	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	652	Open in IMG/M
3300012918\|Ga0137396_11025641	Not Available	596	Open in IMG/M
3300012922\|Ga0137394_11040911	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	679	Open in IMG/M
3300012923\|Ga0137359_10262689	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1539	Open in IMG/M
3300012923\|Ga0137359_10701965	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300012923\|Ga0137359_11666741	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525	Open in IMG/M
3300012927\|Ga0137416_10874088	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	798	Open in IMG/M
3300012927\|Ga0137416_10878971	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	796	Open in IMG/M
3300012927\|Ga0137416_11359015	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	643	Open in IMG/M
3300012927\|Ga0137416_11977442	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300012927\|Ga0137416_12200081	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300015080\|Ga0167639_1046046	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300015197\|Ga0167638_1113736	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	502	Open in IMG/M
3300015200\|Ga0173480_11134070	Not Available	524	Open in IMG/M
3300015358\|Ga0134089_10434857	Not Available	565	Open in IMG/M
3300016319\|Ga0182033_10699499	Not Available	887	Open in IMG/M
3300018027\|Ga0184605_10116420	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	1188	Open in IMG/M
3300019879\|Ga0193723_1110695	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300019887\|Ga0193729_1248747	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	565	Open in IMG/M
3300020022\|Ga0193733_1023785	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1730	Open in IMG/M
3300020022\|Ga0193733_1083403	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	896	Open in IMG/M
3300020579\|Ga0210407_10127245	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1952	Open in IMG/M
3300020579\|Ga0210407_10995368	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300020579\|Ga0210407_11353339	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300020579\|Ga0210407_11456898	Not Available	506	Open in IMG/M
3300020580\|Ga0210403_10239052	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1490	Open in IMG/M
3300020580\|Ga0210403_10309371	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300021078\|Ga0210381_10233280	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	650	Open in IMG/M
3300021168\|Ga0210406_10055453	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3452	Open in IMG/M
3300021168\|Ga0210406_10151435	All Organisms → cellular organisms → Bacteria	1947	Open in IMG/M
3300021168\|Ga0210406_10552422	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	904	Open in IMG/M
3300021171\|Ga0210405_10599433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300021432\|Ga0210384_10632905	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300021432\|Ga0210384_11389721	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	607	Open in IMG/M
3300021478\|Ga0210402_10525795	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300021478\|Ga0210402_10714965	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	925	Open in IMG/M
3300021479\|Ga0210410_10175101	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1918	Open in IMG/M
3300022756\|Ga0222622_10371805	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1001	Open in IMG/M
3300025922\|Ga0207646_10352032	Not Available	1331	Open in IMG/M
3300026309\|Ga0209055_1075185	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1403	Open in IMG/M
3300026309\|Ga0209055_1143443	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300026317\|Ga0209154_1008976	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	4948	Open in IMG/M
3300026317\|Ga0209154_1123398	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1094	Open in IMG/M
3300026317\|Ga0209154_1188007	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300026318\|Ga0209471_1171654	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300026328\|Ga0209802_1085747	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1450	Open in IMG/M
3300026331\|Ga0209267_1305223	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300026333\|Ga0209158_1164135	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	806	Open in IMG/M
3300026334\|Ga0209377_1346483	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300026528\|Ga0209378_1002383	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	12992	Open in IMG/M
3300026532\|Ga0209160_1058612	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	2169	Open in IMG/M
3300026538\|Ga0209056_10092471	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2500	Open in IMG/M
3300026542\|Ga0209805_1269015	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300026548\|Ga0209161_10253198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	913	Open in IMG/M
3300026548\|Ga0209161_10319728	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	723	Open in IMG/M
3300026548\|Ga0209161_10558207	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300027565\|Ga0209219_1047708	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300027651\|Ga0209217_1052049	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1232	Open in IMG/M
3300027674\|Ga0209118_1055076	Not Available	1168	Open in IMG/M
3300027727\|Ga0209328_10228760	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	558	Open in IMG/M
3300027748\|Ga0209689_1243780	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	745	Open in IMG/M
3300027875\|Ga0209283_10450832	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	833	Open in IMG/M
3300028047\|Ga0209526_10886861	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300028047\|Ga0209526_10985197	Not Available	505	Open in IMG/M
3300028536\|Ga0137415_10975992	Not Available	658	Open in IMG/M
3300031022\|Ga0138301_1089052	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	886	Open in IMG/M
3300031047\|Ga0073995_10014967	Not Available	554	Open in IMG/M
3300031753\|Ga0307477_10131578	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300031753\|Ga0307477_10265457	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1188	Open in IMG/M
3300031753\|Ga0307477_10456458	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	871	Open in IMG/M
3300031753\|Ga0307477_10499230	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	827	Open in IMG/M
3300032180\|Ga0307471_100499293	Not Available	1364	Open in IMG/M
3300032205\|Ga0307472_101009458	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	780	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.53%
Aquatic	Environmental → Aquatic	2.47%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.53%
Sediment	Environmental → Aquatic → Sediment	1.85%
Freshwater	Environmental → Aquatic → Freshwater	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.27%
Loam	Environmental → Terrestrial → Soil → Loam	9.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.62%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	31.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	29.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.49%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.32%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.09%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.23%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.62%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.62%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.62%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.62%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.62%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015080	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6C, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031047	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1002747062	3300002245	Forest Soil	SQVGQAVSGSNFREDVNADGSISSSDVALTKSHVGDGVP*
Ga0066672_104269492	3300005167	Soil	ALTKSQVGFVVGSGNFREDVNANGTINAGDVAIVKSDVGHALPP*
Ga0066680_106174891	3300005174	Soil	SQVGHAITGSNFREDVNADGSISSSDVALTKSDVGHGVP*
Ga0066679_100754873	3300005176	Soil	QVGQTVSGSNFREDVNASGTITATDVTIVKSDVGHALPP*
Ga0066679_104900101	3300005176	Soil	NASDVSLTKSQVGQAVSSSNFREDVNANGLINSVDVALAKSKVGTALPP*
Ga0066679_108455802	3300005176	Soil	QVGQMVTGSNFREDVNASGTITATDVTIVKSDVGHALPP*
Ga0066679_109886111	3300005176	Soil	LTKSQVGVPVSGSNFREDVNANGVINSVDVAQVKANVGTALPP*
Ga0066690_104245671	3300005177	Soil	LTKSQVGFVVGSGNFREDVNANGAINAGDVAIVKSDLGHALPP*
Ga0066690_107230431	3300005177	Soil	KSQVGQTVMSSNFREDVNASGTITATDVTIVKSDVGHALPP*
Ga0070708_1018257812	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	ASDVSQTKSRVGQPVTGLNFREDVNASGTISSSDVALVKSNSGTALPP*
Ga0070697_1001147731	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LTKSQVGMPVGSGNFREDVNANGAINSGDVALVKANLGHALPP*
Ga0070697_1001472291	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	QVGVAVSGSNFREDVNANGVINAVDVAQVKANVGTALPP*
Ga0070697_1006710862	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ASDVSLTKSQVGLVVGSGNFREDVNANGAINSGDVALVKANLGHALPP*
Ga0070697_1008858521	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	KSQVGLVVGSGNFREDVNANGAINSGDVAIVKSDLGHALPP*
Ga0070697_1013421122	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	DVAQTKSQIGQAVTGSNFREDVNTDGTLSSSDVSIVKAHSGGN*
Ga0066707_101888481	3300005556	Soil	LTKSQVGNPVTSSNFREDVNVNGTISATDVALVKSKVGTALPP*
Ga0066707_102146621	3300005556	Soil	LTKSQVGMAVNSSNFREDVNTSGTISSTDVAIVKSDVGTSLP*
Ga0066704_101285243	3300005557	Soil	QAVTGSNFREDVNADGSLSATDVALTKSHVGDGLP*
Ga0066704_103137172	3300005557	Soil	GQTVTGSNFREDVNADGSISSSDVALTKSDVGHGVP*
Ga0066700_100600944	3300005559	Soil	TDVALTKSQVGQMVTGSNFREDVNASGTITATDVTIVKSDVGHALPP*
Ga0066700_109842182	3300005559	Soil	SQVGVPVSGSNFREDVNANGTISATDVALVKSKVGTALPP*
Ga0066703_107570621	3300005568	Soil	DVALVKSRVGQTVTGSNFREDVNADGSISSSDVALTKSDVGHGVP*
Ga0066705_104400282	3300005569	Soil	QAVSGSNFREDVNANGTISATDVALVKSDVGTALPP*
Ga0066706_103456541	3300005598	Soil	QVGQAVSGSNFREDVNANGTISATDVALVKANVGTALPP*
Ga0066706_104172832	3300005598	Soil	AVSGSNFREDVNANGAINSVDVAQVKANVGTGLP*
Ga0066706_109881571	3300005598	Soil	VVNASDVSLTKAQAGQLVTGSDFREDVNENGTISAGDVGLVKANVGTALP*
Ga0075017_1014672962	3300006059	Watersheds	ILTKAQVGQPVTSSDFREDVNANGTISATDVVQVKANVGTALPP*
Ga0070716_1007570011	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	KAEVGQPVTGLNFREDVNANGTISATDVAQVKAEVGTALPP*
Ga0066665_108752641	3300006796	Soil	VSGSNFREDVNANGVISATDVAQVKSEVGTALPP*
Ga0066665_116475601	3300006796	Soil	TVNASDVSQTKSQVGQPVSGSNFREDVNASGTNTATDVAIVKSEVGTSLPP*
Ga0066659_101346791	3300006797	Soil	ATDVALVKSRVGQTVTGSNFREDVNADGSISSSDVALTKSDVGHGVP*
Ga0066659_119384701	3300006797	Soil	GQTVSGSNFREDVNVNGTISATDVTLVKSEVGTALPP*
Ga0066660_100882181	3300006800	Soil	DVALTKSQVGFVVGSGNFREDVNANGAINAGDVAIVKSDVGHALPP*
Ga0066660_101375611	3300006800	Soil	ALTKSQVGFVVGSGNFREDVNANGAINAGDVAIVKSDLGHALPP*
Ga0066660_106123173	3300006800	Soil	SQVGFVVGSGNFREDVNANGAINAGDVAIVKSDLGHALPP*
Ga0066660_106639261	3300006800	Soil	VGQAVTGSNFREDVNADGSLSATDVALTKSHVGDGLP*
Ga0066660_108536402	3300006800	Soil	TKSQVGQPVSGSNFREDVNANGLISATDVAQVKSKVGTALPP*
Ga0066660_113562442	3300006800	Soil	TKSQVGQAVTGSNFREDVNANGTINAGDVAQVKANVGRALPP*
Ga0079219_122459092	3300006954	Agricultural Soil	GQTVTGSNFREDVNTDGTLSSSDVAIVKANSGGN*
Ga0066710_1002598523	3300009012	Grasslands Soil	VALTKSQVGATVTSSNFREDVNANGAISSTDVALVKSDVGHALP
Ga0066710_1003998002	3300009012	Grasslands Soil	VKSQVGQAVTGSNFREDVTGDGSLNSTDVALTKSHVGDGLP
Ga0066710_1006097922	3300009012	Grasslands Soil	GQTVTSSNFREDVNASGTISSTDVAVVKSNVGTSLPP
Ga0066710_1011573183	3300009012	Grasslands Soil	DVSLTKSQVGVAVSGSNFREDVNANGAINSVDVAQVKANVGTALPP
Ga0066710_1011707442	3300009012	Grasslands Soil	VAVSGSNFREDVNANGAINSVDVAQVKANVGTALPP
Ga0066710_1016827213	3300009012	Grasslands Soil	ALTKSQVGAPVSGSNFREDVNANGVINSVDVAQVKANVGTALPP
Ga0066710_1040826322	3300009012	Grasslands Soil	SLTKSQVGQAVSGSNFREDVNANGLINSVDVALVKSKVGTALP
Ga0099830_101011524	3300009088	Vadose Zone Soil	SQTKSHVGQAVSGSNFREDVNANGVINSVDVAQVKANVGTGLP*
Ga0099830_115671581	3300009088	Vadose Zone Soil	VGVAVSGSNFREDVNANGVINSVDVAQVKAEVGTALPP*
Ga0099828_100357994	3300009089	Vadose Zone Soil	QVGQPVTGSNFREDVNANGLINASDVALVKSNSGTALPP*
Ga0099827_118706561	3300009090	Vadose Zone Soil	TTADGLVDRSDVNLTKSESGQAVTTSNFREDVTANGSISHSDVSLVRSELGTSLPP*
Ga0066709_1005867271	3300009137	Grasslands Soil	NASDVSLTKTQVGQTVTSSNFREDVNASGTISSTDVAVVKSNVGTSLPP*
Ga0066709_1046585201	3300009137	Grasslands Soil	VGQVVSGSNFREDVNSNGSINAADLALVKANAGTSLALAPNL
Ga0134088_106540972	3300010304	Grasslands Soil	VSLTKSQVGQPVTTSNFREDVNAGGTISSTDVAVVKSDVGTSLPP*
Ga0134121_124831812	3300010401	Terrestrial Soil	VTSSDVAQTKTQVGQLVAAQNFRTDVNASGDINASDVALVKSKSGTAPLSRP*
Ga0126350_121492221	3300010880	Boreal Forest Soil	PIDGSNFREDVNANGLINSVDVAQVKSKVGTALPP*
Ga0137392_103527111	3300011269	Vadose Zone Soil	DVSLTKSQVGQAVSSSNFREDVNPNGLINSVDVAQVKANVGTALPP*
Ga0137392_115136052	3300011269	Vadose Zone Soil	GQPVSGSNFREDVNANGVINSVDVAQVKANVGTALPP*
Ga0137392_115809341	3300011269	Vadose Zone Soil	VGVAVSGSNFREDVNANGAINAVDVAQVKAEVGTALPP*
Ga0137389_114565712	3300012096	Vadose Zone Soil	ASDVALTKSQVGATVTSSNFREDVNANGAISSTDVALVKSDVGHALP*
Ga0137388_108571112	3300012189	Vadose Zone Soil	DVSQTKSQVGQPVDSGNFREDVNASGTITATDVTIVKSDVGHALPP*
Ga0137388_115780522	3300012189	Vadose Zone Soil	DVALTKSQVGIAVSSSNFREDVNANGTISSTDVAIIKSDVGTSLPP*
Ga0137388_117028022	3300012189	Vadose Zone Soil	VSGSNFREDVNANGVINSVDIALVKSKVGTALPP*
Ga0137363_106664122	3300012202	Vadose Zone Soil	VNASDVSLTKAQVGQVVSGSNFREDVNANGLINSVDVALVKAKVGTALP*
Ga0137363_108446623	3300012202	Vadose Zone Soil	PVGSGNCREDVNANGTITATDVAIVKSDVGTSLPP*
Ga0137363_113918702	3300012202	Vadose Zone Soil	RAVNSTDVALTKSHVGQPASGSNLREHVNTSRTITATDVTIVKSDVGHALPP*
Ga0137399_101526611	3300012203	Vadose Zone Soil	KSQVGQTVTSSNFRQDVNASGTITATDVTIVKSDVGHALPP*
Ga0137399_103756353	3300012203	Vadose Zone Soil	TKAQVGQAVSGSNFREDVNANGLINSVDVALVKAKVGTALPP*
Ga0137399_103774621	3300012203	Vadose Zone Soil	KSQVGFVVGSGNFREDVNANGAINAGDVAIVKSDLGHALPP*
Ga0137399_104097882	3300012203	Vadose Zone Soil	VGVPVTGSNFREDVNANGLITSVDVALVKSKVGTALPP*
Ga0137362_107142581	3300012205	Vadose Zone Soil	DVGLTKSQVGVPVSGSNFREDVNANGTISATDVALVKSKVGTALPP*
Ga0137362_117186952	3300012205	Vadose Zone Soil	SLTKSQVGVAVSGSNFREDVNANGVINSVDVAQVKANVGTALPP*
Ga0137380_116193071	3300012206	Vadose Zone Soil	SQTKSQVGQPVTGSNFREDVNANGLINASDVALVKSNSGTALPP*
Ga0137381_111637542	3300012207	Vadose Zone Soil	SQTKSHVGQAVSGSNFREDVNANGAINSVDVAQVKANVGTGLP*
Ga0137376_105347582	3300012208	Vadose Zone Soil	QVGHGVTGSNFREDVNADGSLTATDVALTKSHVGDGLP*
Ga0137379_101705723	3300012209	Vadose Zone Soil	ASDVGLVKSQVGQAVTGSNFREDVTGDGSLNSTDVALTKSDVGDGLP*
Ga0137370_108830871	3300012285	Vadose Zone Soil	QVGAPVSGSNFREDVNANGTISATDVAQVKAEVGTALPP*
Ga0137386_110862471	3300012351	Vadose Zone Soil	VGAPVSGSNFREDVNANGAINAVDVAQVKANVGTALPP*
Ga0137360_101363581	3300012361	Vadose Zone Soil	NASDVSLTKSQVGQAVTGSNFREDVNANGLINSVDVAQVKANVGTALPP*
Ga0137360_104409022	3300012361	Vadose Zone Soil	VSGSNFREDVNANGAINAVDVAQVKAEVGTALPP*
Ga0137361_100205487	3300012362	Vadose Zone Soil	TKSQVGATVTSSNFREDVNANGAISSTDVALVKSDVGHALP*
Ga0137361_105393612	3300012362	Vadose Zone Soil	VSLTKSQVGQAVTSSNFREDVNVNGTISATDVALVKSKVGTALPPQ*
Ga0137361_106855241	3300012362	Vadose Zone Soil	QVGQAVSGSNFREDVNANGLINSGDVALVKSKVGTALP*
Ga0137361_109731851	3300012362	Vadose Zone Soil	ALTKSQVGAPVSGSNFREDVNANGVINSVDVAQVKAEVGTALPP*
Ga0137361_114205012	3300012362	Vadose Zone Soil	AVGGSNFREDVNANGVINSVDVAQVKANVGTSLPP*
Ga0137358_106792251	3300012582	Vadose Zone Soil	AVTGSNFREDVNADGSLTATDVALTKSHVGDGLP*
Ga0137395_106569051	3300012917	Vadose Zone Soil	SDVSLTKSQVGQTVTSSNFREDVNVNGTISATDVALVKSDVGTALPP*
Ga0137396_100674151	3300012918	Vadose Zone Soil	VGVPVTGSNFREDVNANGLINSVDVALVKSKVGTALPP*
Ga0137396_102583912	3300012918	Vadose Zone Soil	SLTKSQVGQAVSGSNFREDVNANGTISATDVALVKSDVGTALPP*
Ga0137396_107879321	3300012918	Vadose Zone Soil	KSQVGQTVTSSNFREDVNASGTITATDVTVVKSDVGHALPP*
Ga0137396_108911911	3300012918	Vadose Zone Soil	KSQVGQAVTGSNFREDVNADGSLTASDVALTKSHVGDGLP*
Ga0137396_110256412	3300012918	Vadose Zone Soil	VGVPVTGSNFGEDVNANGLITSVDVALVKSKVGTALPP*
Ga0137394_110409114	3300012922	Vadose Zone Soil	GLVKSQVGQAVTGSNFREDVNADGSLSATDVALTKSRVGNGLP*
Ga0137359_102626891	3300012923	Vadose Zone Soil	KSQVGQAVSGSNFREDVNANGTISATDVAQVKADVGTALPP*
Ga0137359_107019652	3300012923	Vadose Zone Soil	DVALVKSRVGQTVTGSNFREDVNADGSLSSSDVALTKSDVGHGVP*
Ga0137359_116667411	3300012923	Vadose Zone Soil	VNASDISQTKSQVGQPVTGSNFREDVNANGLINASDVALVKSNSGTALPP*
Ga0137416_108740881	3300012927	Vadose Zone Soil	VVNATDVGLVKSQVGQAVTGSNFREDVNVDGSLSSSDVALTKSRVGNGLPP*
Ga0137416_108789712	3300012927	Vadose Zone Soil	VDNTNFREDVNANGTITATDVTIVKSDVGHALPP*
Ga0137416_113590152	3300012927	Vadose Zone Soil	SDVSLTKSQVGQAVSSSNFREDVNANGLVNSVDVALVKSKVGTALP*
Ga0137416_119774421	3300012927	Vadose Zone Soil	MATAPSVAADVALTKSQVGATVGASNFREDVNVNGTISSTDVALVKSDVGHALPP*
Ga0137416_122000811	3300012927	Vadose Zone Soil	SQVGQAVTGSNFREDVNADGSLSATDVALTKSHVGDGLP*
Ga0167639_10460463	3300015080	Glacier Forefield Soil	AADVALTKSQAGQTVTSSNFREDVNFNGAINAADVALVKANAGTATALWAVSLM*
Ga0167638_11137361	3300015197	Glacier Forefield Soil	QTKGQLGLPVTGTNFREDVNANGAISSTDVSVVKSDLATSLP*
Ga0173480_111340702	3300015200	Soil	QSGQAVTSSNFRTDVAVNGTVNVSDVALVKSHSGEGGF*
Ga0134089_104348571	3300015358	Grasslands Soil	SDVSLTKSQVGQTVDSGNFREDVNASGTISSTDVAIVKSDVGTSLPP*
Ga0182033_106994992	3300016319	Soil	VAQVRSQLGQGVTSSNFREDVNADGSISSTDEALTKSLLGHGLP
Ga0184605_101164201	3300018027	Groundwater Sediment	QVGVPVSGSNFREDVNFNGTISATDVAQVKANVGTALP
Ga0193723_11106952	3300019879	Soil	LTKSRVGQNVGAGNFREDVNANGTISATDVAIVKSDVGTSLPP
Ga0193729_12487471	3300019887	Soil	DVGLVKSQVGHAVTGSNFREDVNTDGSLSSSDVALTKSHVGDGLP
Ga0193733_10237851	3300020022	Soil	PVTSSNFREDVNANGTISATDVALVKSDVGTALPP
Ga0193733_10834031	3300020022	Soil	VSLTKSRVGQPVTGSNFREDVNANGTISATDVAQVKAKVGTALPP
Ga0210407_101272451	3300020579	Soil	ATDVTHVKSQVGQVVTVSNFREDVNADGSLTATDVVLTKSHVGDGLP
Ga0210407_109953681	3300020579	Soil	VSSADVALTKSQVGQTVGGSNFREDVNANGVLNAVDVAIVKSDVGHALPP
Ga0210407_113533392	3300020579	Soil	VGQAVSSSNFREDVNANGLINSVDVALVKSKVGTALPP
Ga0210407_114568982	3300020579	Soil	VALTKSQVGATVSGSNFREDVNANGVLNAVDVAIVKSDVGHALPP
Ga0210403_102390522	3300020580	Soil	PVTGTNFREDVNANGTISSTDVAIVKSDVGTSLPP
Ga0210403_103093711	3300020580	Soil	SQVGQTVGGSNFREDVNANGVLNAVDVAIVKSDVGHALPP
Ga0210381_102332801	3300021078	Groundwater Sediment	TNAADVGLTKSQSGQAVTGSNFREDVNFNGSISASDVGLVKSSSGTSLPP
Ga0210406_100554531	3300021168	Soil	VGATVSGSNFREDVNANGVINSVDVALVKAKVGTALPP
Ga0210406_101514352	3300021168	Soil	VALTKSQVGATVGGTNFREDVNANGVLNAVDVAIVKSDVGHALPP
Ga0210406_105524223	3300021168	Soil	TVGAGNFREDVNVNGTISSTDVALVKSDVGHALPP
Ga0210405_105994332	3300021171	Soil	KSQVGHVVTGSNFREDVNANGTISATDVAQVKAEVGTALPP
Ga0210384_106329051	3300021432	Soil	DVSLTKAQLGQGVGSSNFREDVNANGVINVADVAQVKANLGTSLPP
Ga0210384_113897211	3300021432	Soil	QVGMAVSGSNFREDVNANGTISSTDVAIVKSDVGTSLPP
Ga0210402_105257951	3300021478	Soil	DVSLTKSQVGQSVTMSNFREDVNANGTISGTDVTQVKANVGSALPP
Ga0210402_107149651	3300021478	Soil	VSEADVALTKSQVGATVSGSNFREDVNATGTISSTDVALVKAKVGTALPP
Ga0210410_101751011	3300021479	Soil	VSLTKSQVGVPVSGSNFREDVNVNGTISSTDVALVKSKVGTALPP
Ga0222622_103718052	3300022756	Groundwater Sediment	SQSGQAVTGSNFREDVNFNGSISASDVGLVKSNSGTSLP
Ga0207646_103520321	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	GAAVSGSNFREDVNANGVINSVDVAQVKSEVGTALPP
Ga0209055_10751851	3300026309	Soil	TDVALTKSQVGQMVTGSNFREDVNASGTITATDVTIVKSDVGHALPP
Ga0209055_11434431	3300026309	Soil	AQTKSQVGQNVGSGNFREDVNASGAITATDVSIVKSDVGHALPP
Ga0209154_10089765	3300026317	Soil	NSTDVALTKSQVGQTVTGSNFREDVNASGTITATDVTIVKSDVGHALPP
Ga0209154_11233981	3300026317	Soil	ALGSGSNFREDVNASGTISSTDVALVKSEVGTSLPP
Ga0209154_11880072	3300026317	Soil	TVNASDVSQTKSQVGQPVSGSNFREDVNASGTNTATDVAIVKSEVGTSLPP
Ga0209471_11716541	3300026318	Soil	QVGQPVTGSNFREDVNANGTINAGDVAQVKANVGTALPP
Ga0209802_10857471	3300026328	Soil	ASDVSLTKSQVGQAVSGSNFREDVNANGTISATDVALVKSDVGTALPP
Ga0209267_13052231	3300026331	Soil	SLTKSQVGQPVTGSNFREDVNANGLISSTDVALVKSKVGTALPP
Ga0209158_11641353	3300026333	Soil	ATDVALTKSQVGMPVGSGNFREDVNANGTITATDVAIVKSDVGTSLPP
Ga0209377_13464831	3300026334	Soil	GMPVGSGNFREDVNANGTITATDVAIVKSDVGTSLPP
Ga0209378_10023831	3300026528	Soil	SDVSLTKSQVGQAVTGSNFREDVNANGLINSVDVAQVKANVGTALPP
Ga0209160_10586123	3300026532	Soil	TKSQVGQTVMSSNFREDVNASGTITATDVTIVKSDVGHALPP
Ga0209056_100924711	3300026538	Soil	GQTVSGSNFREDVNVNGTISATDVALVKSEVGTALPP
Ga0209805_12690152	3300026542	Soil	VGQTVTGSNFREDVNASGTITATDVTIVKSDVGHALPP
Ga0209161_102531982	3300026548	Soil	SQVGQMVTGSNFREDVNASGTITATDVTIVKSDVGHALPP
Ga0209161_103197281	3300026548	Soil	MAVHSSNFREDVNTSGTISSTDVAIVKSDVGTSLP
Ga0209161_105582071	3300026548	Soil	KSQVGQAVTGSNFREDVNADGSLTATDVALTKSHVGDGLP
Ga0209219_10477081	3300027565	Forest Soil	SDVALTKSQVGQPVTSSNFREDVNVNGAISSSDVALVKSDVGHALP
Ga0209217_10520491	3300027651	Forest Soil	SDVSLTKSQVGVPVSGSNFREDVNANGTISATDVALVKSKVGTALPP
Ga0209118_10550762	3300027674	Forest Soil	SLTKSQVGQSVTGSNFREDVNANGVINSVDVAPVKSKVGTALPP
Ga0209328_102287601	3300027727	Forest Soil	SDVSLTKSQVGQPVGMSNFREDVNPNGTISATDVALVKSEVGTGLP
Ga0209689_12437802	3300027748	Soil	SRVGQTVTGSNFREDVNADGSISSSDVALTKSDVGHGVP
Ga0209283_104508322	3300027875	Vadose Zone Soil	QVGQPVTGSNFREDVNANGLINASDVALVKSNSGTALPP
Ga0209526_108868611	3300028047	Forest Soil	LVKSQVGQAVTGSNFREDVNADGSISSSDVALTKSHVGDGVP
Ga0209526_109851971	3300028047	Forest Soil	AVKSQVNNPVTQSNLREDVNADGQILNGDVGLTKAHVGDHL
Ga0137415_109759921	3300028536	Vadose Zone Soil	QVGMPVSSSNFREDVNASGTISSTDIALVKSKVGTALPP
Ga0138301_10890521	3300031022	Soil	SDVSLTKSQAGQPVTASNFREDVNANGTISSTDVALVKSDVGTALPP
Ga0073995_100149671	3300031047	Soil	VSAADVALTKSQVGATVGGSNFREDVNVNGTISSTDVALVKSDVGHALPP
Ga0307477_101315781	3300031753	Hardwood Forest Soil	LTKSQVGQPVTGSNFREDVNANGTISSTDVAIVKSDVGTSLPP
Ga0307477_102654572	3300031753	Hardwood Forest Soil	VGQPVSGSNFREDVNANGTISATDVAIVKSDVGTSLPP
Ga0307477_104564581	3300031753	Hardwood Forest Soil	NPVTSSNFREDVNANGMITATDVALLKSDVGTSLPP
Ga0307477_104992302	3300031753	Hardwood Forest Soil	WPKNVQVGMAVSNSNFREDVNANGVINSVDVAEVKAEVGAALPP
Ga0307471_1004992931	3300032180	Hardwood Forest Soil	QTVTGSNFREDVNADGSISSSDVALTKSDVGHGVP
Ga0307472_1010094581	3300032205	Hardwood Forest Soil	DVAQTKSQIGQAVTGSNFREDVNTDGTLSSSDVSIVKAHSGGN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040270

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences