Metagenome / Metatranscriptome Family F040355

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040355
Family Type	Metagenome / Metatranscriptome
Number of Sequences	162
Average Sequence Length	47 residues
Representative Sequence	GSVQTFSGRHINVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAA
Number of Associated Samples	122
Number of Associated Scaffolds	162

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	11.25 %
% of genes near scaffold ends (potentially truncated)	74.07 %
% of genes from short scaffolds (< 2000 bps)	90.74 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.938 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.123 % of family members)
Environment Ontology (ENVO)	Unclassified (29.630 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.469 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.16% β-sheet: 24.32% Coil/Unstructured: 63.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 162 Family Scaffolds
PF03237	Terminase_6N	3.70
PF06147	DUF968	1.85
PF01555	N6_N4_Mtase	1.23
PF00589	Phage_integrase	1.23
PF03092	BT1	1.23
PF00291	PALP	1.23
PF07508	Recombinase	1.23
PF08238	Sel1	0.62
PF00106	adh_short	0.62
PF05368	NmrA	0.62
PF13783	DUF4177	0.62
PF07287	AtuA	0.62
PF06186	DUF992	0.62
PF09839	DUF2066	0.62
PF04055	Radical_SAM	0.62
PF00903	Glyoxalase	0.62
PF02771	Acyl-CoA_dh_N	0.62
PF07978	NIPSNAP	0.62
PF02586	SRAP	0.62
PF13360	PQQ_2	0.62
PF03814	KdpA	0.62
PF00872	Transposase_mut	0.62
PF01408	GFO_IDH_MocA	0.62
PF00342	PGI	0.62
PF01135	PCMT	0.62
PF00313	CSD	0.62
PF04909	Amidohydro_2	0.62
PF13358	DDE_3	0.62
PF12681	Glyoxalase_2	0.62
PF07021	MetW	0.62
PF01503	PRA-PH	0.62
PF08240	ADH_N	0.62
PF00441	Acyl-CoA_dh_1	0.62
PF03928	HbpS-like	0.62
PF00884	Sulfatase	0.62
PF09588	YqaJ	0.62
PF13282	DUF4070	0.62

COG ID	Name	Functional Category	% Frequency in 162 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	1.23
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	1.23
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	1.23
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.23
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	1.23
COG0166	Glucose-6-phosphate isomerase	Carbohydrate transport and metabolism [G]	0.62
COG2060	K+-transporting ATPase, KdpA subunit	Inorganic ion transport and metabolism [P]	0.62
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.62
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.62
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.62
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.62
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.62
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.94 %
All Organisms	root	All Organisms	45.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.94 %
cellular organisms	root	All Organisms → cellular organisms	45.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.94 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.57 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.23 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25.93 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.23 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.23 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.94 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	11.73 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.32 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.23 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.62 %
Alphaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis	0.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.73 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.85 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	1.23 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.23 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.23 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.62 %
Micavibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio	0.62 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.73 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.23 %
Beijerinckia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia	1.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.23 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.62 %
Craurococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Craurococcus	0.62 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.62 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.62 %
Micavibrio aeruginosavorus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio → Micavibrio aeruginosavorus	0.62 %
Inquilinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus	0.62 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.62 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.73 %
unclassified Beijerinckia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia	1.23 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.23 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.62 %
Magnetospirillum marisnigri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum marisnigri	0.62 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Craurococcus → environmental samples	0.62 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.62 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.62 %
Micavibrio aeruginosavorus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio → Micavibrio aeruginosavorus	0.62 %
Inquilinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus	0.62 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.73 %
Beijerinckia sp. L45	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia → Beijerinckia sp. L45	1.23 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.23 %
uncultured Craurococcus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Craurococcus → environmental samples → uncultured Craurococcus sp.	0.62 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.62 %
Magnetospirillum marisnigri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum marisnigri	0.62 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.62 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.62 %
Micavibrio aeruginosavorus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio → Micavibrio aeruginosavorus	0.62 %
Inquilinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus	0.62 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10429274	Not Available	539	Open in IMG/M
3300003505\|JGIcombinedJ51221_10055608	All Organisms → cellular organisms → Bacteria → Proteobacteria	1514	Open in IMG/M
3300004080\|Ga0062385_10113621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia → Beijerinckia sp. L45	1336	Open in IMG/M
3300004081\|Ga0063454_101977746	Not Available	515	Open in IMG/M
3300004635\|Ga0062388_100171778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia → Beijerinckia sp. L45	1675	Open in IMG/M
3300005174\|Ga0066680_10393719	All Organisms → cellular organisms → Bacteria → Proteobacteria	881	Open in IMG/M
3300005174\|Ga0066680_10459892	All Organisms → cellular organisms → Bacteria → Proteobacteria	803	Open in IMG/M
3300005179\|Ga0066684_10561377	Not Available	766	Open in IMG/M
3300005434\|Ga0070709_11449871	Not Available	556	Open in IMG/M
3300005435\|Ga0070714_100406160	Not Available	1288	Open in IMG/M
3300005435\|Ga0070714_100493807	All Organisms → cellular organisms → Bacteria → Proteobacteria	1167	Open in IMG/M
3300005436\|Ga0070713_100558628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1084	Open in IMG/M
3300005436\|Ga0070713_101887993	Not Available	579	Open in IMG/M
3300005439\|Ga0070711_100296401	Not Available	1284	Open in IMG/M
3300005439\|Ga0070711_100941158	Not Available	739	Open in IMG/M
3300005439\|Ga0070711_101289301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	633	Open in IMG/M
3300005467\|Ga0070706_100656703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	973	Open in IMG/M
3300005557\|Ga0066704_10815621	Not Available	580	Open in IMG/M
3300005559\|Ga0066700_10843096	Not Available	614	Open in IMG/M
3300005602\|Ga0070762_10538158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	769	Open in IMG/M
3300005610\|Ga0070763_10343140	Not Available	829	Open in IMG/M
3300006163\|Ga0070715_10782043	Not Available	578	Open in IMG/M
3300006172\|Ga0075018_10660376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	562	Open in IMG/M
3300006175\|Ga0070712_100356503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1198	Open in IMG/M
3300006175\|Ga0070712_101006145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	721	Open in IMG/M
3300006175\|Ga0070712_101048708	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300006893\|Ga0073928_10890124	Not Available	611	Open in IMG/M
3300007788\|Ga0099795_10345403	Not Available	664	Open in IMG/M
3300007788\|Ga0099795_10497386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300007788\|Ga0099795_10623325	All Organisms → cellular organisms → Bacteria → Proteobacteria	515	Open in IMG/M
3300009137\|Ga0066709_101729331	All Organisms → cellular organisms → Bacteria → Proteobacteria	884	Open in IMG/M
3300009143\|Ga0099792_10289679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	968	Open in IMG/M
3300009143\|Ga0099792_11050132	Not Available	546	Open in IMG/M
3300010043\|Ga0126380_12193947	Not Available	510	Open in IMG/M
3300010048\|Ga0126373_11469128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	747	Open in IMG/M
3300010162\|Ga0131853_10351474	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300010361\|Ga0126378_11224909	All Organisms → cellular organisms → Bacteria → Proteobacteria	848	Open in IMG/M
3300010361\|Ga0126378_12387358	Not Available	604	Open in IMG/M
3300010362\|Ga0126377_11357243	Not Available	783	Open in IMG/M
3300010366\|Ga0126379_10955904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Craurococcus → environmental samples → uncultured Craurococcus sp.	960	Open in IMG/M
3300010376\|Ga0126381_100701614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio → Micavibrio aeruginosavorus	1447	Open in IMG/M
3300010400\|Ga0134122_11733719	Not Available	654	Open in IMG/M
3300012189\|Ga0137388_10733578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	917	Open in IMG/M
3300012205\|Ga0137362_10040533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3750	Open in IMG/M
3300012208\|Ga0137376_11657108	Not Available	531	Open in IMG/M
3300012211\|Ga0137377_10579201	Not Available	1060	Open in IMG/M
3300012349\|Ga0137387_10405565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	988	Open in IMG/M
3300012361\|Ga0137360_10070056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2594	Open in IMG/M
3300012582\|Ga0137358_10168528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1493	Open in IMG/M
3300012918\|Ga0137396_10891925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	652	Open in IMG/M
3300012986\|Ga0164304_11295371	Not Available	593	Open in IMG/M
3300016270\|Ga0182036_10588656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	891	Open in IMG/M
3300016294\|Ga0182041_10456442	Not Available	1099	Open in IMG/M
3300016341\|Ga0182035_10639092	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300016371\|Ga0182034_10209248	Not Available	1514	Open in IMG/M
3300016371\|Ga0182034_11163326	Not Available	670	Open in IMG/M
3300016371\|Ga0182034_11830768	Not Available	535	Open in IMG/M
3300016404\|Ga0182037_10763524	Not Available	831	Open in IMG/M
3300016445\|Ga0182038_10301758	Not Available	1309	Open in IMG/M
3300020580\|Ga0210403_10987398	Not Available	659	Open in IMG/M
3300020581\|Ga0210399_11235701	Not Available	591	Open in IMG/M
3300021168\|Ga0210406_10822735	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300021168\|Ga0210406_10973453	Not Available	633	Open in IMG/M
3300021170\|Ga0210400_11090312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	647	Open in IMG/M
3300021171\|Ga0210405_11218000	Not Available	557	Open in IMG/M
3300021178\|Ga0210408_10072825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2688	Open in IMG/M
3300021178\|Ga0210408_10277291	Not Available	1336	Open in IMG/M
3300021178\|Ga0210408_10900823	Not Available	688	Open in IMG/M
3300021180\|Ga0210396_10074602	All Organisms → cellular organisms → Bacteria → Proteobacteria	3084	Open in IMG/M
3300021180\|Ga0210396_10174136	All Organisms → cellular organisms → Bacteria → Proteobacteria	1928	Open in IMG/M
3300021180\|Ga0210396_11741101	Not Available	505	Open in IMG/M
3300021401\|Ga0210393_11581150	Not Available	520	Open in IMG/M
3300021404\|Ga0210389_10098932	Not Available	2245	Open in IMG/M
3300021404\|Ga0210389_10302761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus	1253	Open in IMG/M
3300021404\|Ga0210389_11279089	Not Available	562	Open in IMG/M
3300021405\|Ga0210387_10872732	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300021405\|Ga0210387_10948625	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300021406\|Ga0210386_11431499	Not Available	578	Open in IMG/M
3300021407\|Ga0210383_10813195	Not Available	799	Open in IMG/M
3300021474\|Ga0210390_10943208	Not Available	708	Open in IMG/M
3300021478\|Ga0210402_10703718	Not Available	933	Open in IMG/M
3300021478\|Ga0210402_10761421	Not Available	893	Open in IMG/M
3300021478\|Ga0210402_10860575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	833	Open in IMG/M
3300021478\|Ga0210402_11626242	Not Available	573	Open in IMG/M
3300021559\|Ga0210409_10306786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1430	Open in IMG/M
3300021559\|Ga0210409_10502044	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300021559\|Ga0210409_11258027	Not Available	616	Open in IMG/M
3300021560\|Ga0126371_11275339	Not Available	869	Open in IMG/M
3300022525\|Ga0242656_1034888	Not Available	820	Open in IMG/M
3300022529\|Ga0242668_1159733	Not Available	501	Open in IMG/M
3300022726\|Ga0242654_10310243	Not Available	583	Open in IMG/M
3300025898\|Ga0207692_10407691	Not Available	849	Open in IMG/M
3300025905\|Ga0207685_10352190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	743	Open in IMG/M
3300025915\|Ga0207693_10175621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1686	Open in IMG/M
3300025915\|Ga0207693_10729049	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300025916\|Ga0207663_11071869	Not Available	647	Open in IMG/M
3300025928\|Ga0207700_10341528	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300025929\|Ga0207664_10309019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1393	Open in IMG/M
3300025939\|Ga0207665_11347652	Not Available	569	Open in IMG/M
3300026088\|Ga0207641_10660214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1028	Open in IMG/M
3300026355\|Ga0257149_1073434	Not Available	503	Open in IMG/M
3300026490\|Ga0257153_1040099	Not Available	965	Open in IMG/M
3300026555\|Ga0179593_1037518	All Organisms → cellular organisms → Bacteria	3528	Open in IMG/M
3300026555\|Ga0179593_1099546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2443	Open in IMG/M
3300026557\|Ga0179587_11028439	Not Available	542	Open in IMG/M
3300026998\|Ga0208369_1017846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	680	Open in IMG/M
3300027174\|Ga0207948_1044590	Not Available	535	Open in IMG/M
3300027737\|Ga0209038_10098659	Not Available	882	Open in IMG/M
3300027855\|Ga0209693_10061470	All Organisms → cellular organisms → Bacteria → Proteobacteria	1849	Open in IMG/M
3300027855\|Ga0209693_10159791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1112	Open in IMG/M
3300027884\|Ga0209275_10514010	Not Available	683	Open in IMG/M
3300028047\|Ga0209526_10030258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3804	Open in IMG/M
3300028906\|Ga0308309_11477640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	581	Open in IMG/M
3300029701\|Ga0222748_1023900	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300031231\|Ga0170824_115408700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum marisnigri	2424	Open in IMG/M
3300031545\|Ga0318541_10248360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	989	Open in IMG/M
3300031545\|Ga0318541_10565013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	636	Open in IMG/M
3300031546\|Ga0318538_10264354	Not Available	925	Open in IMG/M
3300031564\|Ga0318573_10586368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300031668\|Ga0318542_10366719	Not Available	742	Open in IMG/M
3300031681\|Ga0318572_10241497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1061	Open in IMG/M
3300031713\|Ga0318496_10293256	Not Available	898	Open in IMG/M
3300031715\|Ga0307476_10629997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300031719\|Ga0306917_11123771	Not Available	611	Open in IMG/M
3300031736\|Ga0318501_10448334	Not Available	700	Open in IMG/M
3300031744\|Ga0306918_10166199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1641	Open in IMG/M
3300031744\|Ga0306918_11540498	Not Available	507	Open in IMG/M
3300031753\|Ga0307477_10165368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1542	Open in IMG/M
3300031753\|Ga0307477_10296658	Not Available	1116	Open in IMG/M
3300031768\|Ga0318509_10763495	Not Available	535	Open in IMG/M
3300031771\|Ga0318546_10390173	Not Available	972	Open in IMG/M
3300031771\|Ga0318546_11108380	Not Available	556	Open in IMG/M
3300031771\|Ga0318546_11349088	Not Available	501	Open in IMG/M
3300031798\|Ga0318523_10669263	Not Available	510	Open in IMG/M
3300031880\|Ga0318544_10149388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	895	Open in IMG/M
3300031893\|Ga0318536_10172557	Not Available	1100	Open in IMG/M
3300031910\|Ga0306923_10302405	Not Available	1828	Open in IMG/M
3300031912\|Ga0306921_10373096	Not Available	1667	Open in IMG/M
3300031912\|Ga0306921_12014217	Not Available	614	Open in IMG/M
3300031941\|Ga0310912_11269159	Not Available	559	Open in IMG/M
3300031945\|Ga0310913_10350202	Not Available	1045	Open in IMG/M
3300031946\|Ga0310910_10989822	Not Available	657	Open in IMG/M
3300031947\|Ga0310909_10188809	Not Available	1708	Open in IMG/M
3300031954\|Ga0306926_10198775	All Organisms → cellular organisms → Bacteria → Proteobacteria	2488	Open in IMG/M
3300031959\|Ga0318530_10015464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2534	Open in IMG/M
3300031962\|Ga0307479_10286128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1629	Open in IMG/M
3300031962\|Ga0307479_11917422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300032001\|Ga0306922_12347593	Not Available	510	Open in IMG/M
3300032051\|Ga0318532_10125392	Not Available	910	Open in IMG/M
3300032052\|Ga0318506_10536397	Not Available	518	Open in IMG/M
3300032059\|Ga0318533_11220809	Not Available	550	Open in IMG/M
3300032059\|Ga0318533_11443496	Not Available	502	Open in IMG/M
3300032063\|Ga0318504_10322291	Not Available	733	Open in IMG/M
3300032065\|Ga0318513_10325273	Not Available	748	Open in IMG/M
3300032076\|Ga0306924_10258359	All Organisms → cellular organisms → Bacteria	2000	Open in IMG/M
3300032090\|Ga0318518_10040084	All Organisms → cellular organisms → Bacteria	2188	Open in IMG/M
3300032261\|Ga0306920_102517864	Not Available	707	Open in IMG/M
3300033289\|Ga0310914_10432552	All Organisms → cellular organisms → Bacteria → Proteobacteria	1191	Open in IMG/M
3300033289\|Ga0310914_10921625	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300033289\|Ga0310914_11687599	Not Available	537	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.77%
Host-Associated	Host-Associated	1.23%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.68%
Aquatic	Environmental → Aquatic	3.09%
Arthropoda	Host-Associated → Arthropoda	0.62%
Plants	Host-Associated → Plants	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.68%
Freshwater	Environmental → Aquatic → Freshwater	1.85%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.62%
Sediment	Environmental → Aquatic → Sediment	0.62%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.31%
Loam	Environmental → Terrestrial → Soil → Loam	20.37%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.85%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.62%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.62%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	54.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.05%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.32%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.85%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.62%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.62%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.11%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.09%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.85%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.62%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.62%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026998	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_104292741	3300001867	Forest Soil	INVGPDGTIEMSADDAQYLIRAGWTKLAEWTRDEAA*
JGIcombinedJ51221_100556084	3300003505	Forest Soil	VPDLTPALSVRLRAPPGIGSVQTFSGRRVDVDLDGTIEMSAEDAQYYIRDGWIELAE*
Ga0062385_101136211	3300004080	Bog Forest Soil	MSAERRKLQAPPGVGSVQTFSGRHLKIGPDGTVEMSADDAKHLIIDGWTKLAEWESEAEG*AG
Ga0063454_1019777461	3300004081	Soil	CDIGSVQTFSGRHIYPGPDRTFEMSAEDAQYLIRDGWTKLAEWKNDKAA*
Ga0062388_1001717781	3300004635	Bog Forest Soil	MSAERRKLQAPPGVGSVQTFSGRHLKIGPDGTVEMSADDAKHLIIDGWTKLAEWESEAEG
Ga0066680_103937191	3300005174	Soil	IGAVQTFSGRHLNVKEDGTVEMSAGDAEYLIPYGWIKLAEWTSSS*
Ga0066680_104598921	3300005174	Soil	VQTFSGRHINIGPDRTVEMSAEDAKYLIREGWTKLAEWTGDEAT
Ga0066684_105613771	3300005179	Soil	RLQAPSGGMGSVQTFSGRHINVSPDGTIEMSADDAWYLIRAGWTKLAEWTRDEAA*
Ga0070709_114498711	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	FSGRHINVSPDGTIEMSADDAQYLIREGWTKLAEWTSDKAA*
Ga0070714_1004061601	3300005435	Agricultural Soil	VQTFSGRHINVSPDGTIEMSADDAQYLIREGWTKLAEWTSDKAA*
Ga0070714_1004938072	3300005435	Agricultural Soil	MGSVQTFSGRHINVSPDGTVEMSADDAQYLIRAGWTKLAEWTRDEAA*
Ga0070713_1005586281	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VQTFSGRHINVSPDGTIEMSADDAQYLIREGWTKLAEWTRDEAA*
Ga0070713_1018879932	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VRLQAPSGMGSVQTFSGRHINVSPDGTIEMSADDAQYMIRQGWTKLAEWTRDDAA*
Ga0070711_1002964013	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MGSVQTFSGRHLNIGLDGTVEMSAEDAKYLIRDGWTKLAEWSCDDVV*
Ga0070711_1009411583	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	FSGRHINVGPDRTVEMSADDAQYLIRDGWTKLAEWTSGETA*
Ga0070711_1012893011	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VQTFSGRHINVSPDGTIEMSADDAQYLIREGWTKLAEWTSDKA
Ga0070706_1006567032	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VQTFSGRHINVGLDRTIEMSAEDAQYYIPDGWIPDGWAKLAEWTTDEAA*
Ga0066695_106427191	3300005553	Soil	LNVNEDGTVEMSADDAQYLIPYGWTKLAEWKSST*
Ga0066704_108156212	3300005557	Soil	LNVNEDGTVEMSADDAQYLIADGWTKLAEWKSST*
Ga0066700_108430961	3300005559	Soil	RHINVSPDGTIEMSADDAWYLIRAGWTKLAEWTRDEAA*
Ga0070762_105381582	3300005602	Soil	VQTFSGRHINVSPDGTIEMSADDAQYLIRAGWTKLAEWTRDEAA*
Ga0070763_103431401	3300005610	Soil	GSVQTFSGRHINVSPDGTIEMSADDAQYMIRQGWTKLAEWTRDDAA*
Ga0070715_107820431	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MGSVQTFSGRHLNIGPDGTVEMSAEDAKYLIRDGWTKLAEWSCDDVV*
Ga0075018_106603762	3300006172	Watersheds	MGSVQTLSGRHVTVGLDGTVEMSPKDTEYLIRAGWTMLAEWKSDQAA*
Ga0070712_1003565031	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	NVSPDGTIEMSADDAQYLIREGWTKLAEWTSDKAA*
Ga0070712_1010061452	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LGRLWAPRGSVPTFSGRHLNIGPDGTVEMSAEDAKYLIRDGWTKLAEWSCDDVV*
Ga0070712_1010487082	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MGSVQTFSGRHINVSPDGTIEMSADDAQYLIRAGWTKLAEWTRDEAA*
Ga0073928_108901241	3300006893	Iron-Sulfur Acid Spring	GMGSVQTFSGRHINVSPDGTIEMSADDAQYLIREGWTKLAEWTSDKAA*
Ga0099795_103454031	3300007788	Vadose Zone Soil	PPGIGSVYTFSRRTINVGPDGTIEMSADDAQYLIRAGWTKLAEWTRDEAA*
Ga0099795_104973861	3300007788	Vadose Zone Soil	VQTFSGRHLNIGPDGTVEMSAEDAKYLIRDGWTKLAEW
Ga0099795_106233252	3300007788	Vadose Zone Soil	VRLRAPSGMGSVQTFSGRHINVGPDGAIEMSAEDAKYLIRDGWTKLAEWTSDEAA*
Ga0066709_1017293313	3300009137	Grasslands Soil	VQTFSGRHINIGPDRTVEMSAEDAKYLIREGWTKLAEWTGDEAT*
Ga0099792_102896793	3300009143	Vadose Zone Soil	LARPPLIEQTFSGRHLNIGLDGTVEMSAEDAKYLIRDGWTKLAEWSCDD
Ga0099792_110501321	3300009143	Vadose Zone Soil	HMGSVQTFSGRHLNIGPDGTVEMSAEDSKYLIRDGWTKLAEWSCDDVV*
Ga0126380_121939472	3300010043	Tropical Forest Soil	APPGIGSVQTFSGRHINVGLDGTIEMSADDAQYFIRDGWTKLAEWTIDEKV*
Ga0126373_114691282	3300010048	Tropical Forest Soil	HPAPTMPRLRAPPGIGAVQTSSGLHHNIGPEGPVEMSAEDAEYLIRAGWTKIAEWTREEAA*
Ga0131853_103514741	3300010162	Termite Gut	LALRCDGTVEMSADNAQYLIRAGWAKLAEWTRDEAA*
Ga0126378_112249092	3300010361	Tropical Forest Soil	TTSWVRLRAPHMGAVQTFSGRHINVGPDGTVEMSTDDAQYLIRAGWTKLAEWTTDEEV*
Ga0126378_123873582	3300010361	Tropical Forest Soil	PGIAGSVQTFSRRHIDLSPDGTVEMSADDAQYFIRAGWTKLAEWTDDEAA*
Ga0126377_113572432	3300010362	Tropical Forest Soil	QAPPGVGAVQTFSGRHINVGLDGTIEMSAADAEYYIRQDWPKLAEWAIDDAV*
Ga0126379_109559044	3300010366	Tropical Forest Soil	RGIAGSVQTFSRRHIDLSPDGTVEMSAEDAQYFIRDGWTKLIEWTDDEAA*
Ga0126381_1007016143	3300010376	Tropical Forest Soil	SWVRLRAPHMGAVQTFSGRHINVGLDGTVEMSAEDAQYLIRAGWTKLAEWTVDEDV*
Ga0134122_117337191	3300010400	Terrestrial Soil	SVYTSSRRSLDVGPDGTIEMSADDAQYLIRAGWTKLAEWTRDEPA*
Ga0137388_107335782	3300012189	Vadose Zone Soil	VPTFSGRHLNIGPDGTVEMSAEDAKYLIRDGWTKLAEWSCDEVV*
Ga0137362_100405333	3300012205	Vadose Zone Soil	VQTFSGRHIKIGPDRTVEMSAEDAKYLIREGWTKLAEWTGDEAT*
Ga0137376_116571081	3300012208	Vadose Zone Soil	GTVLCPPQGAAGIGAVQTFSGRHLNVKEDGTVEMSAGDAEYLIPYGWIKLAEWKSSS*
Ga0137377_105792012	3300012211	Vadose Zone Soil	VQTFSGRHINVGPDRTVEMSAADAKYLIRDGWTKLAEWTNDKAA*
Ga0137387_104055652	3300012349	Vadose Zone Soil	VQTLSGEHLNVAEDGTVEMSADDAKCFIASGWTKLAEWDGQGS*
Ga0137360_100700562	3300012361	Vadose Zone Soil	VQTFSGRHLTVGEDGTVEMSAEDAEAMIRAGFTKLAEWRGDDAA*
Ga0137358_101685281	3300012582	Vadose Zone Soil	RTINVGPDGTIEMSADDAEYLIRAGWTKLAEWTRDEAA*
Ga0137396_108919252	3300012918	Vadose Zone Soil	VPTFSGRHLNIGPDGTVEMSAEDAKYLIRDGWTKLAEWSCDDVV*
Ga0164304_112953711	3300012986	Soil	TFSGRHLNIGLDGTVEMSAEDAKYLIRDGWTKLAEWSCDDVV*
Ga0182036_105886561	3300016270	Soil	PFSGRHINVGLDGTIEMSADDAECFIRAGWTKLAERSSDDGA
Ga0182041_104564422	3300016294	Soil	QTFSGRHINVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAAEPPS
Ga0182035_106390922	3300016341	Soil	NVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAG
Ga0182034_102092482	3300016371	Soil	LQAPRGIGSVQTFSGRHTNVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAG
Ga0182034_111633261	3300016371	Soil	SVQTFSGRHINVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAA
Ga0182034_118307681	3300016371	Soil	LQAPRGIGSVQTFSGRHTNVGPDGTIEMSADDAQYLIRAGWAKLAEWTSDDAA
Ga0182037_107635241	3300016404	Soil	PDGTIEMSADDAQYLIRAGWTKLAEWTSDDAAEPPS
Ga0182038_103017582	3300016445	Soil	FSGRHTNVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAG
Ga0210403_109873981	3300020580	Soil	SGRHINVSPDGTIGMSADDAQYMIRQGWTKLAEWPRDDAA
Ga0210399_112357011	3300020581	Soil	APSGMGSVQTFSGRHINVSPDGTIEMSADDAQYMIRQGWTKLAEWPRDDAA
Ga0210406_108227352	3300021168	Soil	HINVSPDGTIEMSADDAQYLIRAGWTKLAEWTRDEAA
Ga0210406_108567631	3300021168	Soil	ERLRDEAERSRVRLRAPPGTGAVQTFSGRHLNIQPDGTVEMSADDAKYLIPHGWTKLAEWSRDEMV
Ga0210406_109734531	3300021168	Soil	PGLGSVQTFSGRHINVSPDGTIEMSADDAQYLIRAGWAKLAEWTRDEAA
Ga0210400_110903122	3300021170	Soil	MGSVQTFSGRHLNIGSDGTVEMSAEDAKYLIRDGWTKLAEWSCDDVA
Ga0210405_112180001	3300021171	Soil	DTGAVQTFSGRHLNIQPDGTVEMSADDAKYLIAHGWTKLAEWSRDEMV
Ga0210408_100728256	3300021178	Soil	VPTFSGRRLNIGSDGTVEMSAEHAKYLIRNGWTKLAEWSCDDVV
Ga0210408_102772911	3300021178	Soil	QAPSGMGSVQTFSGRHINVSPDGTIEMSADDAQYLIREGWTKIAEWTRDEAA
Ga0210408_109008231	3300021178	Soil	QAPSGMGSVQTFSGRHINVSPDGTIEMSADDAQYLIREGWTKLAEWTRDEAA
Ga0210396_100746024	3300021180	Soil	RVRLRAPPGIGSVQTFSGRHINVGLDGTIEMSAEDAQYYIRDGWTKLAEWTTDEAP
Ga0210396_101741361	3300021180	Soil	VQTFSGRHINVSPDGTIEMSADDAQYMIRQGWTKLAEWTRDEAA
Ga0210396_117411011	3300021180	Soil	RYRVRLLAPPGIGSVYTFSRRTINVGPDGTIEMSADDAQYLIRVGWTKLAEWTRDEAA
Ga0210393_115811502	3300021401	Soil	LQAPSGMGSVQTFSGRHINVSPDGTIEMSADDAQYLIRAGWTKLAEWTRDEAA
Ga0210389_100989325	3300021404	Soil	FSGRHINVSPDGTIEMSADDAQYLIREGWTKLAEWTSDKAA
Ga0210389_103027612	3300021404	Soil	RYRVRLLAPPGMGSVYTFSRRTINVGPDGTIEMSADDAQYLIRAGWTKLAEWTRDEAA
Ga0210389_112790891	3300021404	Soil	TFSGRHINVSPDGTIEMSADDAQYLIREGWTKLAEWTRDEAA
Ga0210387_108727321	3300021405	Soil	TFSGRHINVSPDGTIEMSADDAQYLIREGWTKIAEWTRDEAA
Ga0210387_109486252	3300021405	Soil	RLLAPPGIGSVYTFSRRTINVGPDGTIEMSADDAQYLIRAGWTKLAEWTRDEAA
Ga0210386_114314991	3300021406	Soil	RRTINVGPDGTIEMSADDAQYLIRAGWTKLAEWTRDEAA
Ga0210383_108131952	3300021407	Soil	SGRHINVSPDGTIEMSADDAQYLIREGWTKLAEWTRDEAA
Ga0210390_109432081	3300021474	Soil	GRHLNIQPDGTVEMSADDAKYLIPHGWTKLAEWSRDEMV
Ga0210402_107037181	3300021478	Soil	MGSVQTFSGRHINVSPDGTIEMSADDAQYLIREGWTKLAEWTRDEAA
Ga0210402_107614211	3300021478	Soil	TLSGRHLNIGPDGTLEMSAEDAKYLIRDGWTKLAEWSCDDVV
Ga0210402_108605752	3300021478	Soil	PPGLGSVYTFSRRTINVGPDGTIEMSADDAQYLIRDGWTKLAEWTRDEAA
Ga0210402_116262421	3300021478	Soil	TFLGRHLNIGPDGTVEMSAEDAKYLIRDGWTKLAEWSCDDVV
Ga0210409_103067862	3300021559	Soil	LAPPGMGSVYTFSRRTINVGPDGTIEMSADDAQYLIRAGWTKLAEWTRDEAA
Ga0210409_105020443	3300021559	Soil	VYTFSRRTINAGPDGTIEMSADDAQYLIRAGWTKLA
Ga0210409_112580272	3300021559	Soil	TFSGRHLNIGSDGTVEMSADDAKYLIPHGWTKLAEWKSTS
Ga0126371_112753391	3300021560	Tropical Forest Soil	RHIDLSPDGTVEMSADDAQYFIRAGWTKLAEWTNDEAA
Ga0242656_10348882	3300022525	Soil	VQTFSGRHINVSPDGTIEMSADDAQYLIRAGWTKLAEWTRDEAA
Ga0242668_11597331	3300022529	Soil	GAVQTFSGRHINVSPDGTIEMSADDAQYLIRAGWTKLAEWTCDEAA
Ga0242654_103102431	3300022726	Soil	GMGSVQTFSGRHINLSPDGTIEMSADDAQYLIREGWTKLAEWTRDEAA
Ga0207692_104076911	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MGSVQTFSGRHLNIGLDGTVEMSAEDAKYLIRDGWTKLAEWSCDDVV
Ga0207685_103521902	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VPTFSGRHLNIGLDGTVEMSAEDAKYLIRDGWTKLAEWSCDDVV
Ga0207693_101756213	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	RHINVSPDGTIEMSADDAQYLIREGWTKLAEWTSDKAA
Ga0207693_107290492	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MGSVQTFSGRHINVSPDGTIEMSADDAQYLIRAGWTKLAEWTRDEAA
Ga0207663_110718693	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	RHINVGPDRTVEMSADDAQYLIRDGWTKLAEWTSGETA
Ga0207700_103415281	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GMGSVQTFSGRNINVSPDGTIEMSADDAQYLIRAGWTKLAEWTRDEAA
Ga0207664_103090191	3300025929	Agricultural Soil	SGRHIDVSPDDTIEMSADDAQYLIRAGWTKLAEWTRDEAA
Ga0207665_113476522	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	GSVQTFWGRHINVSLDGTIEMSADDAQYQIRAGWTKLAEWTRDEAA
Ga0207641_106602143	3300026088	Switchgrass Rhizosphere	MGSVQTFSGRHINVSPDGTIEMSADDAQYMIRQGWTKLAEWTRDDAA
Ga0257149_10734341	3300026355	Soil	AGIGSVQTFSGRHLNIGSDGTVEMSAADAKYLIPYGWTKLAEWSCDDVA
Ga0257153_10400992	3300026490	Soil	TFSGRHLNIGSDGTVEMSAADAKYLIPYGWTKLAEWSCDDVA
Ga0179593_10375181	3300026555	Vadose Zone Soil	MGSVQTFSGRHLNIGPDGTVEMSAEDAKYLIRDGWTKLAEWSCDDVV
Ga0179593_10995463	3300026555	Vadose Zone Soil	VQTFSGRHLYIGPDGTVEMSAEDAKYLIRDGWTKLAEWTATTSV
Ga0179587_110284391	3300026557	Vadose Zone Soil	LRAPHMGSVQTFSGRHLNIGLDGTVEMSAEDAKYLIRDGWTKLAEWSCDDVV
Ga0208369_10178462	3300026998	Forest Soil	PFGMGSVQTFSGRHINVSPDGTIEMSADDAQYLIREGWTKLAEWTRDEAA
Ga0207948_10445902	3300027174	Forest Soil	QAPSGMGSVQTFSGRHINVSPDGTIEMSADDAQYLIRAGWTKLAEWTRDEAA
Ga0209038_100986592	3300027737	Bog Forest Soil	VQTFSGRHLNVGPDGTVEMSAEDAKYLIAAGWTMLAEWKSDEAA
Ga0209693_100614701	3300027855	Soil	VRLQAPSGMGSVQTFSGRHINVSPDGTIEMSADDAQYMIRQGWTKLAEWTRDDAA
Ga0209693_101597911	3300027855	Soil	VRLQAPSGMGSVQTFSGRHINVSPDGTIEMSADDAQYLIREGWTKLAEWTRDEAA
Ga0209275_105140101	3300027884	Soil	GIGSVQTFSGRHINVSPDGSIEMSADDAQYLIRTGWTKLAEWTRDEAA
Ga0209526_100302582	3300028047	Forest Soil	VPTFSGRHLNIGPDGTVEMSAEDAKYLIRDGWTKLAEWSCDDVV
Ga0308309_114776401	3300028906	Soil	MRAPPGIGYVQTFSGRHINVGLDGTIEMSAEDAHYYIRDGWTKLAEWTTDEAA
Ga0222748_10239001	3300029701	Soil	MGSVQTFSGRHINVSPDGTIEVSADDAQYMIRQGWTKLAERTRDDPA
Ga0170824_1154087003	3300031231	Forest Soil	VGSPSGATGIGAVQTFSGRHLTVSPDDTVEMSAEDSEYLIRAGWTKLAEWSREEAA
Ga0318541_102483602	3300031545	Soil	RLQAPRGIGSVQTFSGRHTNVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAG
Ga0318541_105650131	3300031545	Soil	LQAPRGIGSVQTFSGRHINVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAA
Ga0318538_102643542	3300031546	Soil	VSRSFVCIGSAQTFSGRHINVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAAEPPS
Ga0318573_105863682	3300031564	Soil	LQAPRGIGSVQTFSGRHINVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDEPPS
Ga0318542_103667192	3300031668	Soil	HRGLQAPAGLGAVQTFSGRHINVGLDGTIEMSAVDAEYYIRQGWPKLAEWTIDDPV
Ga0318572_102414971	3300031681	Soil	LQAPRGIGSVQTFSGRHINVGPDGTIEMSADDAQYLIRAGWTKLAEWPSDDAA
Ga0318496_102932561	3300031713	Soil	LQAPRGIGSVQTFSGRHTNVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAA
Ga0307476_106299971	3300031715	Hardwood Forest Soil	GRHINVSPDGTIEMSADDAQYLIRAGWTKLAEWTRDEAA
Ga0306917_111237711	3300031719	Soil	NVDPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAA
Ga0318501_104483342	3300031736	Soil	GIGSVQTFSGRHTNVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAA
Ga0306918_101661992	3300031744	Soil	LQAPRGIGSVQTFSGRHINVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAG
Ga0306918_115404981	3300031744	Soil	AGEGLHGVQTFSGRHTNVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAA
Ga0307477_101653681	3300031753	Hardwood Forest Soil	RVRLQAPSGMGAVQTFSGRHINVSPDGTIEMSADDAQYLIRAGWTKLAEWTRDEAA
Ga0307477_102966581	3300031753	Hardwood Forest Soil	RHINVSPDGTIEMSADDAQYMIRAGWTKLAEWTRDEAA
Ga0318509_107634951	3300031768	Soil	RLQAPRDIGSVQTFSGRHTNVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAG
Ga0318546_103901732	3300031771	Soil	TFSGRHINVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAAEPPS
Ga0318546_111083801	3300031771	Soil	VQTFSGQHINVSLDGTIEVSAEDAQYFVRDGWSKLAEWTTEEDATAERS
Ga0318546_113490881	3300031771	Soil	VLGVVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAA
Ga0318523_106692631	3300031798	Soil	TVSGRHINVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAA
Ga0318544_101493881	3300031880	Soil	RLRAPPSLGAVQTFSGQHIIVGLDGTIEMSAADAQFYIRDGWAKLAEWTIG
Ga0318536_101725572	3300031893	Soil	CRVRLQAPRGIGSVQTFSGRHTNVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDEPPS
Ga0306923_103024052	3300031910	Soil	VQTFSGRHLTVNPDGTVEMSAEDSEYLIRAGWTKLAEWCSREEAA
Ga0306921_103730961	3300031912	Soil	VSRSFVCIGSVQTFSGRHINVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAAEPPS
Ga0306921_120142172	3300031912	Soil	GRHINVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAA
Ga0310912_112691591	3300031941	Soil	PPGIGTVQTLSGRHLNVGADGTVEMSVEDAECLTRTGSTKIAEWSCEDAA
Ga0310913_103502021	3300031945	Soil	NVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAA
Ga0310910_109898221	3300031946	Soil	SVQTFSGRHTNVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDEPPS
Ga0310909_101888091	3300031947	Soil	GRHTNVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAG
Ga0306926_101987755	3300031954	Soil	MNVQTFSGRHLHAGLDGRIEVSPEDAQYLICAGWTKLAEWTTDETG
Ga0318530_100154642	3300031959	Soil	IGSVQTFSGRHINVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAA
Ga0307479_102861284	3300031962	Hardwood Forest Soil	INVSPDGTVEMSADDAQYLIRAGWTKLAEWTRDEAA
Ga0307479_119174221	3300031962	Hardwood Forest Soil	MGSVQTFSGRHLNIGSDGTVEMSAEDAKYLIRDGWTKLAEWSCDDVV
Ga0306922_123475932	3300032001	Soil	LQAPRGIGSVQTFSGRHTNVGPDGTIEMSADDAQYLIRAGWTKLAEWPSDDAA
Ga0318532_101253921	3300032051	Soil	GFRVRLQAPAGLGAVQTFSGRHINVGLDGTIEMSAVDAEYYIRQGWPKLAEWTIDDPV
Ga0318506_105363971	3300032052	Soil	VSRSFVCIGSAQTFSGRHINVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDEPPS
Ga0318533_112208091	3300032059	Soil	VQTFSGRHINVDPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAA
Ga0318533_114434961	3300032059	Soil	TNVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAG
Ga0318504_103222912	3300032063	Soil	IGSVQTFSGRHTNVGPDGTIEMSADDAQYLIRAGWAKLAEWTSDDAA
Ga0318513_103252732	3300032065	Soil	VSRSFVCIGSAQTFSGRHINVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDNAA
Ga0306924_102583595	3300032076	Soil	GSVQTFSGRHINVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAA
Ga0318518_100400841	3300032090	Soil	RGIGSVQTFSGRHTNVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAG
Ga0306920_1025178641	3300032261	Soil	SGRHTNVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAA
Ga0310914_104325521	3300033289	Soil	VQTFSGQHINVSLDGTIEVSAEDAQYFVRDGWTKLAEWTTEEDA
Ga0310914_109216251	3300033289	Soil	VQTFSGRHINVGLDGTIEISADDVQYYIRDRWTKLAEWTIDDGV
Ga0310914_116875991	3300033289	Soil	TFSGRHTNVGPDGTIEMSADDAQYLIRAGWTKLAEWTSDDAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040355

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences