Metagenome Family F040494

Basic Information
Family ID	F040494
Family Type	Metagenome
Number of Sequences	161
Average Sequence Length	45 residues
Representative Sequence	MRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Number of Associated Samples	8
Number of Associated Scaffolds	161

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	40.48 %
% of genes near scaffold ends (potentially truncated)	54.04 %
% of genes from short scaffolds (< 2000 bps)	36.65 %
Associated GOLD sequencing projects	6
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (49.689 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Root Nodules (54.658 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (100.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.33% β-sheet: 4.44% Coil/Unstructured: 82.22%
Feature Viewer

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Pfam ID	Name	% Frequency in 161 Family Scaffolds
PF03732	Retrotrans_gag	4.97
PF00078	RVT_1	3.11
PF07727	RVT_2	3.11
PF13976	gag_pre-integrs	3.11
PF00665	rve	2.48
PF00067	p450	1.24
PF08284	RVP_2	1.24
PF03004	Transposase_24	1.24
PF14223	Retrotran_gag_2	1.24
PF02365	NAM	0.62
PF02326	YMF19	0.62
PF05699	Dimer_Tnp_hAT	0.62
PF12550	GCR1_C	0.62
PF13963	Transpos_assoc	0.62
PF12436	USP7_ICP0_bdg	0.62
PF10539	Dev_Cell_Death	0.62
PF04195	Transposase_28	0.62
PF14291	DUF4371	0.62
PF01135	PCMT	0.62
PF14244	Retrotran_gag_3	0.62
PF00324	AA_permease	0.62
PF13456	RVT_3	0.62
PF03108	DBD_Tnp_Mut	0.62
PF00443	UCH	0.62
PF04734	Ceramidase_alk	0.62
PF02458	Transferase	0.62

COG ID	Name	Functional Category	% Frequency in 161 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	2.48
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	2.48
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	2.48
COG4584	Transposase	Mobilome: prophages, transposons [X]	2.48
COG2124	Cytochrome P450	Defense mechanisms [V]	1.24
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.62
COG0711	FoF1-type ATP synthase, membrane subunit b or b'	Energy production and conversion [C]	0.62
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	0.62
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	0.62
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	0.62
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.62
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.62
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.62
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.62
COG5207	Uncharacterized Zn-finger protein, UBP-type	General function prediction only [R]	0.62
COG5533	Ubiquitin C-terminal hydrolase	Posttranslational modification, protein turnover, chaperones [O]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.31 %
Unclassified	root	N/A	49.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	49.69 %
Unclassified	root	N/A	49.69 %
Viruses	superkingdom	All Organisms → Viruses	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	44.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	44.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	44.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	42.24 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	42.24 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	4.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	32.30 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	4.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	32.30 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	4.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	32.30 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	4.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	32.30 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	4.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	29.81 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	4.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	29.81 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	4.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	29.81 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	4.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	29.81 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	4.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	29.81 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	4.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
fabids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids	29.81 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	4.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
Fabales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales	29.81 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	4.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
Fabaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae	29.81 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	4.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
Papilionoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae	29.81 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	4.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
50 kb inversion clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade	29.81 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	4.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
NPAAA clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade	29.81 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	4.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
indigoferoid/millettioid clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade	29.81 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	4.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
Phaseoleae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae	29.81 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	4.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
Vigna	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna	26.71 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	4.97 %
Glycine	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Glycine	1.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
Vigna unguiculata	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	23.60 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	4.97 %
Glycine subgen. Soja	subgenus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Glycine → Glycine subgen. Soja	1.86 %
Vigna angularis	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna angularis	0.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.69 %
Vigna unguiculata	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	23.60 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	4.97 %
Glycine max	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Glycine → Glycine subgen. Soja → Glycine max	1.86 %
Vigna angularis	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna angularis	0.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300006943\|Ga0099822_1000433	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	37932	Open in IMG/M
3300006943\|Ga0099822_1004638	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae	17920	Open in IMG/M
3300006943\|Ga0099822_1006071	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	15751	Open in IMG/M
3300006943\|Ga0099822_1008476	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	13134	Open in IMG/M
3300006943\|Ga0099822_1012894	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	9898	Open in IMG/M
3300006943\|Ga0099822_1021282	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	6296	Open in IMG/M
3300006943\|Ga0099822_1023031	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	5796	Open in IMG/M
3300006943\|Ga0099822_1030628	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	4040	Open in IMG/M
3300006943\|Ga0099822_1031456	Not Available	3891	Open in IMG/M
3300006943\|Ga0099822_1033175	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	3591	Open in IMG/M
3300006943\|Ga0099822_1039243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	2730	Open in IMG/M
3300006943\|Ga0099822_1047896	Not Available	1920	Open in IMG/M
3300006943\|Ga0099822_1066404	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	1082	Open in IMG/M
3300006943\|Ga0099822_1068195	Not Available	1036	Open in IMG/M
3300006943\|Ga0099822_1068630	Not Available	1025	Open in IMG/M
3300006943\|Ga0099822_1082463	Not Available	776	Open in IMG/M
3300006943\|Ga0099822_1082894	Not Available	771	Open in IMG/M
3300006943\|Ga0099822_1085019	Not Available	744	Open in IMG/M
3300006943\|Ga0099822_1093971	Not Available	650	Open in IMG/M
3300006943\|Ga0099822_1095257	Not Available	639	Open in IMG/M
3300006943\|Ga0099822_1100747	Not Available	596	Open in IMG/M
3300006943\|Ga0099822_1101550	Not Available	591	Open in IMG/M
3300006943\|Ga0099822_1103680	Not Available	576	Open in IMG/M
3300006943\|Ga0099822_1106772	Not Available	556	Open in IMG/M
3300006943\|Ga0099822_1106967	Not Available	555	Open in IMG/M
3300006943\|Ga0099822_1109287	Not Available	542	Open in IMG/M
3300006943\|Ga0099822_1111627	Not Available	530	Open in IMG/M
3300006943\|Ga0099822_1112268	Not Available	527	Open in IMG/M
3300006943\|Ga0099822_1117840	Not Available	500	Open in IMG/M
3300006944\|Ga0099823_1013354	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	8265	Open in IMG/M
3300006944\|Ga0099823_1076216	Not Available	1383	Open in IMG/M
3300006944\|Ga0099823_1085343	Not Available	1151	Open in IMG/M
3300021320\|Ga0214544_1001085	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	54854	Open in IMG/M
3300021320\|Ga0214544_1002296	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna	40348	Open in IMG/M
3300021320\|Ga0214544_1002765	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	36664	Open in IMG/M
3300021320\|Ga0214544_1003750	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	31005	Open in IMG/M
3300021320\|Ga0214544_1003765	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	30932	Open in IMG/M
3300021320\|Ga0214544_1006162	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	22443	Open in IMG/M
3300021320\|Ga0214544_1008043	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae	17972	Open in IMG/M
3300021320\|Ga0214544_1009655	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	14923	Open in IMG/M
3300021320\|Ga0214544_1012780	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna	10673	Open in IMG/M
3300021320\|Ga0214544_1013991	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	9337	Open in IMG/M
3300021320\|Ga0214544_1014007	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	9326	Open in IMG/M
3300021320\|Ga0214544_1015215	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	8146	Open in IMG/M
3300021320\|Ga0214544_1016026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	7461	Open in IMG/M
3300021320\|Ga0214544_1016163	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	7347	Open in IMG/M
3300021320\|Ga0214544_1017436	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Glycine → Glycine subgen. Soja → Glycine max	6432	Open in IMG/M
3300021320\|Ga0214544_1018759	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	5580	Open in IMG/M
3300021320\|Ga0214544_1019250	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	5305	Open in IMG/M
3300021320\|Ga0214544_1020706	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Glycine → Glycine subgen. Soja → Glycine max	4567	Open in IMG/M
3300021320\|Ga0214544_1021352	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	4257	Open in IMG/M
3300021320\|Ga0214544_1022559	Not Available	3761	Open in IMG/M
3300021320\|Ga0214544_1022977	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	3603	Open in IMG/M
3300021320\|Ga0214544_1023286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	3496	Open in IMG/M
3300021320\|Ga0214544_1023919	Not Available	3294	Open in IMG/M
3300021320\|Ga0214544_1024812	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	3016	Open in IMG/M
3300021320\|Ga0214544_1025134	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	2923	Open in IMG/M
3300021320\|Ga0214544_1027195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	2417	Open in IMG/M
3300021320\|Ga0214544_1027209	Not Available	2414	Open in IMG/M
3300021320\|Ga0214544_1029639	Not Available	1997	Open in IMG/M
3300021320\|Ga0214544_1030453	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	1875	Open in IMG/M
3300021320\|Ga0214544_1031698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	1713	Open in IMG/M
3300021320\|Ga0214544_1033231	Not Available	1539	Open in IMG/M
3300021320\|Ga0214544_1033844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	1474	Open in IMG/M
3300021320\|Ga0214544_1036595	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	1254	Open in IMG/M
3300021320\|Ga0214544_1039357	Not Available	1086	Open in IMG/M
3300021320\|Ga0214544_1041293	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	985	Open in IMG/M
3300021320\|Ga0214544_1046168	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna	801	Open in IMG/M
3300021320\|Ga0214544_1052462	Not Available	645	Open in IMG/M
3300021320\|Ga0214544_1053616	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	623	Open in IMG/M
3300021320\|Ga0214544_1056553	Not Available	574	Open in IMG/M
3300021320\|Ga0214544_1059750	Not Available	528	Open in IMG/M
3300021321\|Ga0214542_1007947	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	18025	Open in IMG/M
3300021321\|Ga0214542_1009022	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	15919	Open in IMG/M
3300021321\|Ga0214542_1019692	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Glycine → Glycine subgen. Soja → Glycine max	5216	Open in IMG/M
3300021321\|Ga0214542_1020557	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	4804	Open in IMG/M
3300021321\|Ga0214542_1023816	Not Available	3563	Open in IMG/M
3300021321\|Ga0214542_1033345	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	1742	Open in IMG/M
3300021321\|Ga0214542_1053222	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	733	Open in IMG/M
3300021321\|Ga0214542_1055393	Not Available	688	Open in IMG/M
3300021321\|Ga0214542_1058413	Not Available	630	Open in IMG/M
3300021324\|Ga0214545_1002807	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna	33454	Open in IMG/M
3300021324\|Ga0214545_1004020	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	27705	Open in IMG/M
3300021324\|Ga0214545_1005731	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	22190	Open in IMG/M
3300021324\|Ga0214545_1015020	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	8690	Open in IMG/M
3300021324\|Ga0214545_1018368	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	6392	Open in IMG/M
3300021324\|Ga0214545_1023883	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	3906	Open in IMG/M
3300021324\|Ga0214545_1024789	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna angularis	3611	Open in IMG/M
3300021324\|Ga0214545_1033071	All Organisms → Viruses → Predicted Viral	1916	Open in IMG/M
3300021324\|Ga0214545_1035072	Not Available	1684	Open in IMG/M
3300021324\|Ga0214545_1040433	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	1262	Open in IMG/M
3300021324\|Ga0214545_1040945	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	1233	Open in IMG/M
3300021327\|Ga0214543_1005128	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	24372	Open in IMG/M
3300021327\|Ga0214543_1009158	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	15620	Open in IMG/M
3300021327\|Ga0214543_1009824	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	14610	Open in IMG/M
3300021327\|Ga0214543_1010198	Not Available	14083	Open in IMG/M
3300021327\|Ga0214543_1012095	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	11698	Open in IMG/M
3300021327\|Ga0214543_1013973	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	9715	Open in IMG/M
3300021327\|Ga0214543_1019409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	5862	Open in IMG/M
3300021327\|Ga0214543_1038057	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	1399	Open in IMG/M
3300021327\|Ga0214543_1040395	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	1246	Open in IMG/M
3300021327\|Ga0214543_1043112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	1101	Open in IMG/M
3300027296\|Ga0209389_1003055	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	13245	Open in IMG/M
3300027296\|Ga0209389_1019327	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	6107	Open in IMG/M
3300027296\|Ga0209389_1022513	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	5580	Open in IMG/M
3300027296\|Ga0209389_1051185	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	2848	Open in IMG/M
3300027296\|Ga0209389_1068790	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1994	Open in IMG/M
3300027296\|Ga0209389_1072902	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1835	Open in IMG/M
3300027296\|Ga0209389_1104093	Not Available	993	Open in IMG/M
3300027296\|Ga0209389_1105173	Not Available	975	Open in IMG/M
3300027296\|Ga0209389_1108124	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	923	Open in IMG/M
3300027296\|Ga0209389_1135010	Not Available	560	Open in IMG/M
3300027296\|Ga0209389_1138762	Not Available	521	Open in IMG/M
3300027296\|Ga0209389_1140566	Not Available	504	Open in IMG/M
3300027357\|Ga0209589_1003033	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	29374	Open in IMG/M
3300027357\|Ga0209589_1011444	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	12491	Open in IMG/M
3300027357\|Ga0209589_1020284	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	6266	Open in IMG/M
3300027357\|Ga0209589_1030580	Not Available	2935	Open in IMG/M
3300027357\|Ga0209589_1036037	Not Available	2043	Open in IMG/M
3300027357\|Ga0209589_1036643	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1976	Open in IMG/M
3300027357\|Ga0209589_1047753	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata	1135	Open in IMG/M
3300027357\|Ga0209589_1048724	Not Available	1091	Open in IMG/M
3300027357\|Ga0209589_1050351	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1022	Open in IMG/M
3300027357\|Ga0209589_1052115	Not Available	957	Open in IMG/M
3300027357\|Ga0209589_1055555	Not Available	852	Open in IMG/M
3300027357\|Ga0209589_1073418	Not Available	510	Open in IMG/M

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F040494

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300006943	Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW	Host-Associated	Open in IMG/M
3300006944	Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW	Host-Associated	Open in IMG/M
3300021320	Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3	Host-Associated	Open in IMG/M
3300021321	Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1	Host-Associated	Open in IMG/M
3300021324	Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4	Host-Associated	Open in IMG/M
3300021327	Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2	Host-Associated	Open in IMG/M
3300027296	Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes)	Host-Associated	Open in IMG/M
3300027357	Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes)	Host-Associated	Open in IMG/M

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0099822_100043347	3300006943	Root Nodules	MRDKRANYDVCKANFVLAQKETKNVFHMSLKSGRSVLETKKTKGT*
Ga0099822_10046381	3300006943	Root Nodules	MRDKIVNYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT*
Ga0099822_10060711	3300006943	Root Nodules	KIGQIRLQKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSCQSVLKTKETKGT*
Ga0099822_100847623	3300006943	Root Nodules	KRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKAKETKGT*
Ga0099822_10128941	3300006943	Root Nodules	MREKANYGVCKANFVLAQKETKNVSHMSPKNGQSVLKAKETKGT*
Ga0099822_10156984	3300006943	Root Nodules	MRDKRANNIGVCKANFVLAQKETKNVSHMSPKSGQRVLKSKETKGT*
Ga0099822_101823011	3300006943	Root Nodules	MRDKRANYGVCKSNFLLAQKETKNVSHMSPKSGQSVLKTKETKGT*
Ga0099822_10212821	3300006943	Root Nodules	TKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT*
Ga0099822_10230311	3300006943	Root Nodules	YGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKEIKGT*
Ga0099822_10306286	3300006943	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKET
Ga0099822_10314562	3300006943	Root Nodules	MKDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVVKTKETKGT*
Ga0099822_10331752	3300006943	Root Nodules	MRDKRANYGVCKANFVLGQKETKNVSHMSPKSGQSVLKAKETKGT*
Ga0099822_10392432	3300006943	Root Nodules	MRDKRANYGVCKANFVRAQKETKNVSHMSPKSGQSVIKTKETKGT*
Ga0099822_10478962	3300006943	Root Nodules	MRDKRANYDVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT*
Ga0099822_10601342	3300006943	Root Nodules	MRDKRANYGVCKANFFLAQKETKNVSHMSPKSDHIVLKTKETKGT*
Ga0099822_10642051	3300006943	Root Nodules	KRANYGVCKANFVLAQKETKNVSHMSPKSGQRVLKTKETKGP*
Ga0099822_10664041	3300006943	Root Nodules	RANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKIKETKGI*
Ga0099822_10681952	3300006943	Root Nodules	ETRSNKITKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSSQSVLKTKEIKGT*
Ga0099822_10686301	3300006943	Root Nodules	KLGQIRLQKIRDKRANYGVCKTNFVLAQKETKNVSHMSPKIGQSVLKTKETKGT*
Ga0099822_10774332	3300006943	Root Nodules	MRDKRANYGVCKANFVLAQKKTKNVSHMSPKSGQRVLKTKETKGT*
Ga0099822_10824632	3300006943	Root Nodules	MRDKRVNYGVCKANFVLAQKETKSVSHMSPKSDYSVLKTKETKGK*
Ga0099822_10828941	3300006943	Root Nodules	MRDKRPNYGVCKANFVLAQKETKNVSHMSPKSGQS
Ga0099822_10850192	3300006943	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSHTSPKSGQSVLKAKETKGT*
Ga0099822_10855172	3300006943	Root Nodules	MRDKRANYDVCKANFVLAQKETKNVSHMSPKSDQSVLKTKETKGT*
Ga0099822_10885562	3300006943	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSHMSRKSGQRVLKTKKTKGT*
Ga0099822_10888521	3300006943	Root Nodules	MRDKSANYGVCKANFVLEQKETKNVSHMSPKSDQSVLKTKETKGT*
Ga0099822_10894041	3300006943	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQRVIKTKETKGT*
Ga0099822_10896381	3300006943	Root Nodules	MSDKRANYGVCKANFVLAQKETKNVSHMSPKSGQRVLKTKETKGT*
Ga0099822_10939711	3300006943	Root Nodules	MRDKRANYDVCKANFVLAQKETKNVSHMSPKSGQSVLKTKESKGT*
Ga0099822_10952571	3300006943	Root Nodules	MRLQKMRDKGANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKAKKTKGT*
Ga0099822_11007471	3300006943	Root Nodules	MRDKRANYCVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT*
Ga0099822_11015501	3300006943	Root Nodules	MSLQKPNPSFKKLGQIRLQKMRDKRANYGVRKTNFVLAQKDTKNVSHMSPKSGQSVLKTKETKGT*
Ga0099822_11036801	3300006943	Root Nodules	MRDMYKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT*
Ga0099822_11067723	3300006943	Root Nodules	TKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKIKETKGT*
Ga0099822_11069671	3300006943	Root Nodules	MRDKRSNYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT*
Ga0099822_11092872	3300006943	Root Nodules	MRDKRANYDVCKANFVLSQKETKNVSHMSPKSGQSVLKTKETKGT*
Ga0099822_11116272	3300006943	Root Nodules	VRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKAKETKGT*
Ga0099822_11122681	3300006943	Root Nodules	ANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT*
Ga0099822_11137351	3300006943	Root Nodules	MRDKRANNYGVCKANFVLAQKETKNVSHMSPKSDQSVLKSKETKGT*
Ga0099822_11170972	3300006943	Root Nodules	MRDKRVNYGVCKANFVLAQKETKNVSHMSPKSGQSLLKTKETKGT*
Ga0099822_11178401	3300006943	Root Nodules	MRDNGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT*
Ga0099823_10133541	3300006944	Root Nodules	TKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSMLKIKETKGT*
Ga0099823_10283609	3300006944	Root Nodules	MRDKRANYGVCKANFLLAQKETKNVSHMFLKSDQSVLKTKETKGT*
Ga0099823_10762161	3300006944	Root Nodules	GQIRLQKMRDKRANYDVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT*
Ga0099823_10853433	3300006944	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVI
Ga0099823_11473462	3300006944	Root Nodules	MRHKRANYGVCKANFVIAQKETKNVSHMSPKSGQRVLKTKETKRT*
Ga0214544_100108546	3300021320	Root Nodules	VCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0214544_100229614	3300021320	Root Nodules	MRDKRANYDVCKANFVLAQKETKNVFHMSLKSGRSVLETKKTKGT
Ga0214544_100276525	3300021320	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKAKETKGT
Ga0214544_10037501	3300021320	Root Nodules	MRDKRANYGVCKVNFVLAQKQTKNVSHMSPKSGQSVLKTKEIKGT
Ga0214544_10037651	3300021320	Root Nodules	NYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0214544_10049961	3300021320	Root Nodules	QKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSDQSVLKTKGTKGT
Ga0214544_100616225	3300021320	Root Nodules	YGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETRGT
Ga0214544_100637210	3300021320	Root Nodules	MRDKRANYGVCKANFLLAQKETKNVSHMFLKSDQSVLKTKETKGT
Ga0214544_100804319	3300021320	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKEIKGP
Ga0214544_10092701	3300021320	Root Nodules	MRDKRPNYGVCKANFVLAQKETKNVSHMSPKSDQSVLKTKETKGT
Ga0214544_10093562	3300021320	Root Nodules	MRDKRASYGVCMANFVLAQKETKNVSHMSPKSGQRVLKTKETKGT
Ga0214544_10096551	3300021320	Root Nodules	ANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0214544_10108138	3300021320	Root Nodules	NYGVCKANFVLAQKETKNVSHMSPKSGQRVLKTKETKGT
Ga0214544_10127801	3300021320	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTK
Ga0214544_10130144	3300021320	Root Nodules	MRDKKDNYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0214544_10139918	3300021320	Root Nodules	MRDKKANYGVCKANFVLAQKETKNVSHMSPTSGQSVLKTKEIKGT
Ga0214544_10140078	3300021320	Root Nodules	MKDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKG
Ga0214544_10152151	3300021320	Root Nodules	SNKVTKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0214544_10153717	3300021320	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSHMSPKSDQSV
Ga0214544_10160266	3300021320	Root Nodules	MRDKRANYGVCKANFVRAQKETKNVSHMSPKSGQSVIKTKETKGT
Ga0214544_10161631	3300021320	Root Nodules	RSNKVTKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQRVLKTKETKGT
Ga0214544_10174361	3300021320	Root Nodules	MSLQKPNPSFKKLGQIRLQKMRDKRANYGVRKTNFVLAQKDTKNVSHMSPKSGQSVLKTKETKGT
Ga0214544_10181963	3300021320	Root Nodules	MRDKSANYGVCKANFVLEQKETKNVSHMSPKSDQSVLKTKETKGT
Ga0214544_10187599	3300021320	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSHMSLESGHSVIKTKETKGT
Ga0214544_10192506	3300021320	Root Nodules	MGDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETK
Ga0214544_10207064	3300021320	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKE
Ga0214544_10213522	3300021320	Root Nodules	VTKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0214544_10225592	3300021320	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0214544_10228715	3300021320	Root Nodules	MRDKRANYGVCKANFFLAQKETKNVSHMSPKSDHIVLKTKETKGT
Ga0214544_10229772	3300021320	Root Nodules	DKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKEIKGT
Ga0214544_10232867	3300021320	Root Nodules	MRDKRANYGVCKVNFVLAQKETKNVSHMSLESGQSVLKTKEIKGT
Ga0214544_10239192	3300021320	Root Nodules	VCKVNFVLAQKETKNVSHMSPKSGQSVLKAKETKGT
Ga0214544_10248121	3300021320	Root Nodules	NGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0214544_10251341	3300021320	Root Nodules	LETRSNKITKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSSQSVLKTKEIKGT
Ga0214544_10271954	3300021320	Root Nodules	MRDKRANYGVCQANFVLAQKETKNVSHMSPKSDQSVLKTKETKGT
Ga0214544_10272092	3300021320	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKAKETKGA
Ga0214544_10296393	3300021320	Root Nodules	LQKPNPSFYKLGQIRLQKMRDKRANYGVCKANFVLAQKETKNMSHMSPKSGQSVLKTKETKGT
Ga0214544_10304531	3300021320	Root Nodules	MKDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0214544_10313883	3300021320	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSHMSPKSDQSVLKTK
Ga0214544_10316985	3300021320	Root Nodules	RSNKVTKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSMLKTKETKGT
Ga0214544_10332311	3300021320	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLK
Ga0214544_10338443	3300021320	Root Nodules	LLETRSNKVTKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0214544_10365951	3300021320	Root Nodules	KLGQIRLQKMRDKRANYGVCKANFVLAQKETKNVSHMSPKCGQSVLKTKDTKGT
Ga0214544_10393572	3300021320	Root Nodules	YGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0214544_10412931	3300021320	Root Nodules	QKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSDQSVLKTNETKGT
Ga0214544_10461681	3300021320	Root Nodules	KVTKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKAKETKGT
Ga0214544_10513721	3300021320	Root Nodules	KRANYGVCKGNFVLAQKETKNVSHMSPKSDQSVLKTKETKGT
Ga0214544_10524621	3300021320	Root Nodules	KLGQIRLQKMRDKRASYGVCKANFVLAQKETKNVSHMSPKSGQRVLKTKETKGT
Ga0214544_10536161	3300021320	Root Nodules	IRSQKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0214544_10565531	3300021320	Root Nodules	KMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKEIKGT
Ga0214544_10597502	3300021320	Root Nodules	TKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0214542_100794721	3300021321	Root Nodules	KRDNCGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0214542_10090221	3300021321	Root Nodules	MRDKRANYDVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0214542_10196155	3300021321	Root Nodules	MRDKRANYDVCKANFVLAQKETKNVSHMSPKSDQSVLKTKETKGT
Ga0214542_10196921	3300021321	Root Nodules	MRDKGANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKAKKTKGT
Ga0214542_10205571	3300021321	Root Nodules	MRDRRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0214542_10238161	3300021321	Root Nodules	MRDKRANYGVCKVNFVLAQKETKNVSHMSPKSGQSVLKAKETKGT
Ga0214542_10333451	3300021321	Root Nodules	MSLQKPNPSFSKTRSNKVTKMRDKRANYGLCKANFVLAQKETKNVSHISLKSGHSVLKTKETKGT
Ga0214542_10532221	3300021321	Root Nodules	NYCVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0214542_10553931	3300021321	Root Nodules	MRYKRANYGVCKATFVLAQKETKNVSHMSPKSGQSVLKTKETKG
Ga0214542_10584131	3300021321	Root Nodules	KMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKEAKGT
Ga0214545_100280735	3300021324	Root Nodules	KLGQIRLQKMRDKRANYGVCNANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0214545_10040201	3300021324	Root Nodules	MRDKRANYCVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0214545_10057313	3300021324	Root Nodules	MRDKRANYDVCKANFVLAQKETKNVSHMSPKSGQSVLKTKESKGT
Ga0214545_101270612	3300021324	Root Nodules	GVCKANFVLAQKETKNVSHMSPKSGQRVLKTKETKGT
Ga0214545_10150201	3300021324	Root Nodules	LGQIRLQKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQNVLKTKETKGT
Ga0214545_10180926	3300021324	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVFHMYPKSDQSVLKTKETKGT
Ga0214545_10181481	3300021324	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSHMSPKSDQSVLKTNETKGT
Ga0214545_10183681	3300021324	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKEIK
Ga0214545_10238836	3300021324	Root Nodules	MSLQKPNPSFYKLGQIRLQKMRDKRANYGVCKANFVLAQKETKNMSHMSPKSGQSVLKTKETKGT
Ga0214545_10247893	3300021324	Root Nodules	RDNCGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0214545_10290871	3300021324	Root Nodules	DKRANYGVCKANFVLAQKETKNVSHMSPKSGQRVLKTKETKGP
Ga0214545_10324801	3300021324	Root Nodules	RSNKVTKMRDKRGNYGVCKANFVLAQKETKNVSHMSPKSGQRVLKTKESKGT
Ga0214545_10330714	3300021324	Root Nodules	KVTKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0214545_10350721	3300021324	Root Nodules	GQIRLQKMRDKRANYGVCKANFVLAQKETKNVSHMSPKCGQSALKTKETKGT
Ga0214545_10404331	3300021324	Root Nodules	KMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKEIKGP
Ga0214545_10409452	3300021324	Root Nodules	VCKANFVLAQKETKNVSHMSPKSGQSVLKIKETKGI
Ga0214543_100512825	3300021327	Root Nodules	DKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKAKETKGT
Ga0214543_10091581	3300021327	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVFHMSPKSGQSVLKTKE
Ga0214543_100982412	3300021327	Root Nodules	KLGQIRLQKMRDKRANYGVCKANFVLAQKEAKNVSHMSPKSGQSVLKTKETKDT
Ga0214543_101019814	3300021327	Root Nodules	YGVCKANFVLAQKETKNVSHMSPKSGQSVLKAKETKGT
Ga0214543_10120951	3300021327	Root Nodules	MSDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKG
Ga0214543_10139731	3300021327	Root Nodules	KATKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKRKETKGT
Ga0214543_10194093	3300021327	Root Nodules	MSLQKPNPGFSKLGQIRLQKMRDKRANYGVCKANFVLAQKETKNVSHMSPKCGQSVLKTKETKGT
Ga0214543_10206131	3300021327	Root Nodules	KMRDKRASYGVCKANFVLAQKETKDVSHMSPKSGQRVLKTKETKGT
Ga0214543_10380571	3300021327	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKG
Ga0214543_10403952	3300021327	Root Nodules	RSNKVTKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKAKETKGT
Ga0214543_10431122	3300021327	Root Nodules	MSLQKPNPSFYKLGQIRLQKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0209389_100305513	3300027296	Root Nodules	GQIRLQKMRDKRANYDVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0209389_10193276	3300027296	Root Nodules	CKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0209389_10225135	3300027296	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKEIKGT
Ga0209389_10511851	3300027296	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLNSKETKGT
Ga0209389_10687903	3300027296	Root Nodules	KVTKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKPKETKGT
Ga0209389_10729021	3300027296	Root Nodules	MRDKRPNYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKET
Ga0209389_11040931	3300027296	Root Nodules	MRDKRPNYGVCKANFVLAQKETKNVSHMSPKSGQSVIKT
Ga0209389_11051731	3300027296	Root Nodules	RANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0209389_11081241	3300027296	Root Nodules	TKMRDKRVNYGVCKANFVLAQKETKSVSHMSPKSDYSVLKTKETKGK
Ga0209389_11175851	3300027296	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSYMSPKSDQSVLKTKKTKGT
Ga0209389_11350101	3300027296	Root Nodules	MRDKRPNYGVCKANFVLAQKETKNVSHMSPKSGQSVLK
Ga0209389_11387621	3300027296	Root Nodules	MRDMYKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0209389_11405661	3300027296	Root Nodules	MRDKRSNYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKE
Ga0209589_100303340	3300027357	Root Nodules	KMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0209589_101144420	3300027357	Root Nodules	NKVTKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKAKETKGT
Ga0209589_10168671	3300027357	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSHMSPKSDQSVLKT
Ga0209589_10202841	3300027357	Root Nodules	TKMRDKRANYCVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0209589_10305802	3300027357	Root Nodules	MRDKRANYVVCKVNFVLAQKETKNVSHMSPKSGQSVLKAKETKGT
Ga0209589_10360371	3300027357	Root Nodules	DKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKAKETKGA
Ga0209589_10366431	3300027357	Root Nodules	RSNKVTKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQSLLKTKETKGT
Ga0209589_10477531	3300027357	Root Nodules	DKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKIKETKGI
Ga0209589_10487242	3300027357	Root Nodules	MRDLRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT
Ga0209589_10503511	3300027357	Root Nodules	GQIRLQKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSDQSVLKTNETKGT
Ga0209589_10521152	3300027357	Root Nodules	GQIRLQKMRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQRVQKTKKTKGT
Ga0209589_10555551	3300027357	Root Nodules	NYGVCKANFVLAQKETKNVSHMSPKSGQSVIKTKETKGT
Ga0209589_10692491	3300027357	Root Nodules	MRDKRANYGVCKANFVLAQKETKNVSHMSPKSGQRVLKT
Ga0209589_10734181	3300027357	Root Nodules	DKRANYGVCKANFVLAQKETKNVSHMSPKSGQSVLKTKETKGT

Hidden Markov Model


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