Metagenome / Metatranscriptome Family F040576

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040576
Family Type	Metagenome / Metatranscriptome
Number of Sequences	161
Average Sequence Length	64 residues
Representative Sequence	MSKPLLQLAALGVLGFSLWKLGSFFFIPLLFLALKIALVVGIVLFAVWLFKRNDRKGASDSE
Number of Associated Samples	97
Number of Associated Scaffolds	161

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.99 %
% of genes near scaffold ends (potentially truncated)	25.47 %
% of genes from short scaffolds (< 2000 bps)	63.98 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.547 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (36.025 % of family members)
Environment Ontology (ENVO)	Unclassified (81.988 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (88.820 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 80.65% β-sheet: 0.00% Coil/Unstructured: 19.35%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 161 Family Scaffolds
PF03544	TonB_C	22.98
PF01925	TauE	21.12
PF13376	OmdA	8.70
PF06452	CBM9_1	6.83
PF02445	NadA	4.35
PF13360	PQQ_2	3.73
PF04306	DUF456	1.86
PF02518	HATPase_c	1.86
PF00072	Response_reg	1.24
PF12867	DinB_2	1.24
PF13443	HTH_26	1.24
PF13801	Metal_resist	0.62
PF00903	Glyoxalase	0.62
PF13570	PQQ_3	0.62
PF02801	Ketoacyl-synt_C	0.62
PF00005	ABC_tran	0.62
PF13361	UvrD_C	0.62
PF02749	QRPTase_N	0.62
PF13229	Beta_helix	0.62
PF08592	Anthrone_oxy	0.62
PF05048	NosD	0.62
PF01510	Amidase_2	0.62
PF02738	MoCoBD_1	0.62
PF04366	Ysc84	0.62
PF13442	Cytochrome_CBB3	0.62
PF12710	HAD	0.62
PF13193	AMP-binding_C	0.62
PF07517	SecA_DEAD	0.62
PF13411	MerR_1	0.62

COG ID	Name	Functional Category	% Frequency in 161 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	22.98
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	21.12
COG0379	Quinolinate synthase	Coenzyme transport and metabolism [H]	4.35
COG2839	Uncharacterized conserved protein YqgC, DUF456 family	Function unknown [S]	1.86
COG0157	Nicotinate-nucleotide pyrophosphorylase	Coenzyme transport and metabolism [H]	0.62
COG0653	Preprotein translocase subunit SecA (ATPase, RNA helicase)	Intracellular trafficking, secretion, and vesicular transport [U]	0.62
COG1488	Nicotinic acid phosphoribosyltransferase	Coenzyme transport and metabolism [H]	0.62
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.55 %
Unclassified	root	N/A	7.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.55 %
Unclassified	root	N/A	7.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.55 %
Unclassified	root	N/A	7.45 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	37.27 %
Unclassified	root	N/A	7.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.24 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.24 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.62 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	37.27 %
Unclassified	root	N/A	7.45 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.24 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.62 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.62 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	22.36 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	9.32 %
Unclassified	root	N/A	7.45 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.24 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.62 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	22.36 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	9.32 %
Unclassified	root	N/A	7.45 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.62 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	22.36 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	9.32 %
Unclassified	root	N/A	7.45 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.62 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	22.36 %
Unclassified	root	N/A	7.45 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	4.35 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	3.73 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	0.62 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.62 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	22.36 %
Unclassified	root	N/A	7.45 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4.35 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	3.73 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.62 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	0.62 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1000573	All Organisms → cellular organisms → Bacteria	5254	Open in IMG/M
3300002557\|JGI25381J37097_1018611	Not Available	1219	Open in IMG/M
3300002557\|JGI25381J37097_1082207	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	532	Open in IMG/M
3300002558\|JGI25385J37094_10037429	All Organisms → cellular organisms → Bacteria	1684	Open in IMG/M
3300002909\|JGI25388J43891_1002409	All Organisms → cellular organisms → Bacteria	3897	Open in IMG/M
3300002909\|JGI25388J43891_1002669	All Organisms → cellular organisms → Bacteria	3698	Open in IMG/M
3300002909\|JGI25388J43891_1007503	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2116	Open in IMG/M
3300002909\|JGI25388J43891_1022572	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1089	Open in IMG/M
3300002911\|JGI25390J43892_10030932	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1293	Open in IMG/M
3300002911\|JGI25390J43892_10067065	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	830	Open in IMG/M
3300002911\|JGI25390J43892_10105743	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	634	Open in IMG/M
3300002911\|JGI25390J43892_10126214	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	587	Open in IMG/M
3300002916\|JGI25389J43894_1067075	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	615	Open in IMG/M
3300002916\|JGI25389J43894_1088541	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	550	Open in IMG/M
3300005166\|Ga0066674_10000235	All Organisms → cellular organisms → Bacteria	15358	Open in IMG/M
3300005166\|Ga0066674_10561497	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005167\|Ga0066672_10018711	All Organisms → cellular organisms → Bacteria	3577	Open in IMG/M
3300005167\|Ga0066672_10172667	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1366	Open in IMG/M
3300005167\|Ga0066672_10256146	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300005167\|Ga0066672_10287196	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1066	Open in IMG/M
3300005167\|Ga0066672_10289864	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300005171\|Ga0066677_10003042	All Organisms → cellular organisms → Bacteria	6428	Open in IMG/M
3300005171\|Ga0066677_10004317	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5635	Open in IMG/M
3300005171\|Ga0066677_10022481	All Organisms → cellular organisms → Bacteria	2932	Open in IMG/M
3300005172\|Ga0066683_10007121	All Organisms → cellular organisms → Bacteria → Proteobacteria	5606	Open in IMG/M
3300005172\|Ga0066683_10278266	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300005172\|Ga0066683_10852283	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300005174\|Ga0066680_10174975	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300005174\|Ga0066680_10486399	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300005174\|Ga0066680_10714212	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	613	Open in IMG/M
3300005175\|Ga0066673_10039534	All Organisms → cellular organisms → Bacteria	2321	Open in IMG/M
3300005176\|Ga0066679_10580743	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	731	Open in IMG/M
3300005177\|Ga0066690_10005339	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5961	Open in IMG/M
3300005177\|Ga0066690_10094572	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1910	Open in IMG/M
3300005177\|Ga0066690_10226624	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1249	Open in IMG/M
3300005177\|Ga0066690_10573221	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	754	Open in IMG/M
3300005178\|Ga0066688_10041040	All Organisms → cellular organisms → Bacteria	2629	Open in IMG/M
3300005179\|Ga0066684_10083072	All Organisms → cellular organisms → Bacteria	1925	Open in IMG/M
3300005187\|Ga0066675_10538324	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	875	Open in IMG/M
3300005187\|Ga0066675_10590296	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	834	Open in IMG/M
3300005434\|Ga0070709_10346720	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1096	Open in IMG/M
3300005436\|Ga0070713_100438862	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300005436\|Ga0070713_100976153	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300005446\|Ga0066686_10563739	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300005450\|Ga0066682_10000567	All Organisms → cellular organisms → Bacteria	12198	Open in IMG/M
3300005450\|Ga0066682_10235695	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300005451\|Ga0066681_10033356	All Organisms → cellular organisms → Bacteria	2732	Open in IMG/M
3300005468\|Ga0070707_100070229	All Organisms → cellular organisms → Bacteria	3373	Open in IMG/M
3300005540\|Ga0066697_10246410	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300005554\|Ga0066661_10140062	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1474	Open in IMG/M
3300005554\|Ga0066661_10454664	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	781	Open in IMG/M
3300005557\|Ga0066704_10188120	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300005561\|Ga0066699_10288032	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300005561\|Ga0066699_10833604	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300005569\|Ga0066705_10304213	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1010	Open in IMG/M
3300005569\|Ga0066705_10359151	Not Available	917	Open in IMG/M
3300005576\|Ga0066708_10374022	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300005587\|Ga0066654_10002647	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5842	Open in IMG/M
3300005587\|Ga0066654_10347377	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300006755\|Ga0079222_10007455	All Organisms → cellular organisms → Bacteria	3771	Open in IMG/M
3300006755\|Ga0079222_10414802	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	944	Open in IMG/M
3300006797\|Ga0066659_10088194	All Organisms → cellular organisms → Bacteria	2078	Open in IMG/M
3300006797\|Ga0066659_10290841	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300006797\|Ga0066659_10820218	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300006800\|Ga0066660_10359086	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1187	Open in IMG/M
3300006804\|Ga0079221_10040834	All Organisms → cellular organisms → Bacteria	2027	Open in IMG/M
3300006804\|Ga0079221_10501117	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	788	Open in IMG/M
3300006854\|Ga0075425_100247243	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2052	Open in IMG/M
3300007258\|Ga0099793_10001434	All Organisms → cellular organisms → Bacteria	7611	Open in IMG/M
3300009012\|Ga0066710_100159591	All Organisms → cellular organisms → Bacteria	3151	Open in IMG/M
3300009012\|Ga0066710_100324818	All Organisms → cellular organisms → Bacteria	2265	Open in IMG/M
3300009137\|Ga0066709_103849577	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300010303\|Ga0134082_10043927	All Organisms → cellular organisms → Bacteria	1705	Open in IMG/M
3300010303\|Ga0134082_10070082	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1363	Open in IMG/M
3300010304\|Ga0134088_10001777	All Organisms → cellular organisms → Bacteria	8458	Open in IMG/M
3300010320\|Ga0134109_10005190	All Organisms → cellular organisms → Bacteria	3457	Open in IMG/M
3300010320\|Ga0134109_10160920	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	813	Open in IMG/M
3300010321\|Ga0134067_10138419	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	861	Open in IMG/M
3300010322\|Ga0134084_10064231	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1108	Open in IMG/M
3300010325\|Ga0134064_10201675	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300010326\|Ga0134065_10068249	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1129	Open in IMG/M
3300010326\|Ga0134065_10305059	Not Available	611	Open in IMG/M
3300010333\|Ga0134080_10001189	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	8718	Open in IMG/M
3300010335\|Ga0134063_10141231	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300010336\|Ga0134071_10002471	All Organisms → cellular organisms → Bacteria	6797	Open in IMG/M
3300012198\|Ga0137364_10040074	All Organisms → cellular organisms → Bacteria	3057	Open in IMG/M
3300012201\|Ga0137365_10120343	All Organisms → cellular organisms → Bacteria	1975	Open in IMG/M
3300012211\|Ga0137377_10852288	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300012224\|Ga0134028_1281270	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	588	Open in IMG/M
3300012351\|Ga0137386_10106315	All Organisms → cellular organisms → Bacteria	1988	Open in IMG/M
3300012371\|Ga0134022_1015214	Not Available	796	Open in IMG/M
3300012372\|Ga0134037_1172532	Not Available	501	Open in IMG/M
3300012376\|Ga0134032_1099114	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	614	Open in IMG/M
3300012385\|Ga0134023_1147705	Not Available	903	Open in IMG/M
3300012393\|Ga0134052_1264790	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300012400\|Ga0134048_1039061	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300012400\|Ga0134048_1371871	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	788	Open in IMG/M
3300012403\|Ga0134049_1223252	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300012683\|Ga0137398_10000785	All Organisms → cellular organisms → Bacteria	12057	Open in IMG/M
3300012972\|Ga0134077_10531384	Not Available	524	Open in IMG/M
3300012976\|Ga0134076_10001420	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7108	Open in IMG/M
3300014154\|Ga0134075_10124760	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300014154\|Ga0134075_10140562	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300014157\|Ga0134078_10010351	All Organisms → cellular organisms → Bacteria	2720	Open in IMG/M
3300014157\|Ga0134078_10508899	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	561	Open in IMG/M
3300017657\|Ga0134074_1106645	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	964	Open in IMG/M
3300018431\|Ga0066655_10005636	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5107	Open in IMG/M
3300018431\|Ga0066655_10114655	Not Available	1536	Open in IMG/M
3300018431\|Ga0066655_10550425	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300018431\|Ga0066655_10948219	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	591	Open in IMG/M
3300018433\|Ga0066667_10515642	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300018433\|Ga0066667_10827338	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300018433\|Ga0066667_10876819	Not Available	770	Open in IMG/M
3300018468\|Ga0066662_10034225	All Organisms → cellular organisms → Bacteria	3061	Open in IMG/M
3300018468\|Ga0066662_10041140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2858	Open in IMG/M
3300018468\|Ga0066662_10128571	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1867	Open in IMG/M
3300018468\|Ga0066662_10975589	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300018482\|Ga0066669_10013488	All Organisms → cellular organisms → Bacteria	4289	Open in IMG/M
3300018482\|Ga0066669_10343893	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300018482\|Ga0066669_10660331	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	920	Open in IMG/M
3300018482\|Ga0066669_11367826	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	641	Open in IMG/M
3300018482\|Ga0066669_12136269	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	529	Open in IMG/M
3300025885\|Ga0207653_10058828	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300025906\|Ga0207699_10657272	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	766	Open in IMG/M
3300025922\|Ga0207646_10032938	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4687	Open in IMG/M
3300025922\|Ga0207646_10437425	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1180	Open in IMG/M
3300026277\|Ga0209350_1000050	All Organisms → cellular organisms → Bacteria	72671	Open in IMG/M
3300026277\|Ga0209350_1000122	All Organisms → cellular organisms → Bacteria	50818	Open in IMG/M
3300026277\|Ga0209350_1006241	All Organisms → cellular organisms → Bacteria	4085	Open in IMG/M
3300026295\|Ga0209234_1000233	All Organisms → cellular organisms → Bacteria	17397	Open in IMG/M
3300026295\|Ga0209234_1007580	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	4121	Open in IMG/M
3300026295\|Ga0209234_1013017	All Organisms → cellular organisms → Bacteria	3159	Open in IMG/M
3300026296\|Ga0209235_1004588	All Organisms → cellular organisms → Bacteria	7724	Open in IMG/M
3300026297\|Ga0209237_1003466	All Organisms → cellular organisms → Bacteria	9592	Open in IMG/M
3300026297\|Ga0209237_1059207	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1868	Open in IMG/M
3300026298\|Ga0209236_1022610	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3486	Open in IMG/M
3300026301\|Ga0209238_1008717	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	4004	Open in IMG/M
3300026306\|Ga0209468_1037593	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1671	Open in IMG/M
3300026307\|Ga0209469_1000602	All Organisms → cellular organisms → Bacteria	21712	Open in IMG/M
3300026309\|Ga0209055_1012136	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4464	Open in IMG/M
3300026309\|Ga0209055_1237655	Not Available	561	Open in IMG/M
3300026310\|Ga0209239_1190937	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	754	Open in IMG/M
3300026312\|Ga0209153_1000060	All Organisms → cellular organisms → Bacteria	53637	Open in IMG/M
3300026312\|Ga0209153_1022168	All Organisms → cellular organisms → Bacteria	2106	Open in IMG/M
3300026314\|Ga0209268_1048527	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300026315\|Ga0209686_1000895	All Organisms → cellular organisms → Bacteria	14889	Open in IMG/M
3300026317\|Ga0209154_1000336	All Organisms → cellular organisms → Bacteria	33256	Open in IMG/M
3300026322\|Ga0209687_1002085	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6739	Open in IMG/M
3300026326\|Ga0209801_1245500	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	684	Open in IMG/M
3300026331\|Ga0209267_1099667	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1237	Open in IMG/M
3300026523\|Ga0209808_1027878	All Organisms → cellular organisms → Bacteria	2744	Open in IMG/M
3300026523\|Ga0209808_1038753	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2246	Open in IMG/M
3300026529\|Ga0209806_1016503	All Organisms → cellular organisms → Bacteria	3850	Open in IMG/M
3300026530\|Ga0209807_1098492	Not Available	1266	Open in IMG/M
3300026530\|Ga0209807_1134381	Not Available	976	Open in IMG/M
3300026542\|Ga0209805_1182182	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300027643\|Ga0209076_1005464	All Organisms → cellular organisms → Bacteria	3026	Open in IMG/M
3300027765\|Ga0209073_10045960	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300027765\|Ga0209073_10158147	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300028536\|Ga0137415_10271591	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1502	Open in IMG/M
3300032180\|Ga0307471_100260693	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1794	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.38%
Host-Associated	Host-Associated	0.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.38%
Plants	Host-Associated → Plants	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.30%
Loam	Environmental → Terrestrial → Soil → Loam	8.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	63.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.73%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	36.02%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	27.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	18.01%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.73%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.11%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012224	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012371	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012372	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012376	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012385	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10005733	3300002557	Grasslands Soil	MSKPILQLAALGLLGFSLWKLGSFFFIPMLFLALKMAFVVGIVMFAVWLFKRNDRXGASXSETGSS*
JGI25381J37097_10186113	3300002557	Grasslands Soil	MSKPLLQLAALGVLGFSLWKLGSXFFIPLLFLALKIALVVGIVLFAVWLFKRNDRKGASD
JGI25381J37097_10822071	3300002557	Grasslands Soil	MSKPLLQLAALGVLGFSLWELGSFFFIPLLFLALKIALVVGVVLFAVWLFKRNDRKGASDSGTGTS*
JGI25385J37094_100374291	3300002558	Grasslands Soil	MSKPILQLAAVGLVGFALWKLGSFFFIPLLVLAVKVALVVGLVLFAFWLFRKSDKDNKGDAPAE*
JGI25388J43891_10024093	3300002909	Grasslands Soil	MSKPILQLAALGLLGLSLWKLGSFFFIPLVFLVLKVALVVGIVLFAVWLFKRNDRKGTSDSETGSA*
JGI25388J43891_10026695	3300002909	Grasslands Soil	MFKPILQLAAVGLAGFALWKLGSFFFIPLLFLALKVALVVGLVLFAVWFFKKHDDKKGDAASE*
JGI25388J43891_10075034	3300002909	Grasslands Soil	MPKPILQLAAVGLFGFALWKLGSLFLLPLLFLALKVALVVGLVLFAVWFFKKHDDKKGDAASE*
JGI25388J43891_10225722	3300002909	Grasslands Soil	MSKPLLQLAALGVLGFSLWKLGSFFFIPLLFLSLKIALVVGVVLFAVWLFKRNXRKGXSDSETGTS*
JGI25390J43892_100309321	3300002911	Grasslands Soil	MFKPILQLAAVGLAGFALWKLGSFFFFPLLFLALKLALVVGLVLFAFWFFNKKNDKKGDTPAE*
JGI25390J43892_100670652	3300002911	Grasslands Soil	MSKPLLQLAALGVLGFSLWKLGSFFFIPLLFLALKIALVVGIVLFAVWLFKRNDRKGASDSETGTS*
JGI25390J43892_101057432	3300002911	Grasslands Soil	MSKPLLQLAALGVLGFSLWKLGSFFFIPLLFLALKIALVVGVVLFAVWLFKRNDRKGASDSETGTS*
JGI25390J43892_101262142	3300002911	Grasslands Soil	MSKPILQLAALGLLGLSLWKLGSFFFIPLVFLVLKVALVVGIVLFAVWLFKRNDRK
JGI25389J43894_10670752	3300002916	Grasslands Soil	MSKPLLQLAALGVLGFSLWKLGSFFFIPLLFLALKIALVVGIVLFAVWLFKRNDRKGA
JGI25389J43894_10885411	3300002916	Grasslands Soil	MFKPILQLAAVGLAGFALWKLGSFFFIPLLFLAVKVALVVGVVLLAFWFFKKSDKKGDTPAE*
Ga0066674_1000023513	3300005166	Soil	MSKPVLQLAAVGLVGFALWKLGSFFFIPLLVLAVKVALVVGLVLFAFWLFRKSDKDNKDNKGDAPAE*
Ga0066674_105614972	3300005166	Soil	LAGFALWKLGSFFFIPLLFLAVKLALVVGLVLFAFWFFNKKNDKKGDTPAE*
Ga0066672_100187114	3300005167	Soil	MSKPLLQLAALGLVGLSLWKLGAFFFIPLLFLALKIALVVGIVLFAVWLFKRNDKKGTSDSETGSA*
Ga0066672_101726672	3300005167	Soil	MSKPLLQLAALGLLGFSVWKVGSLFFIPLLFLAFKIALVVGIVLFAVWLFKRNDGKKASDSETGSS*
Ga0066672_102561462	3300005167	Soil	LQLAALGVLGFSLWKLGSFFFIPLLFLALKIALVVGVVLFAVWLFKRNDRKGASDSETGTS*
Ga0066672_102871962	3300005167	Soil	MFKPILQLAAVGLAGFALWKLGSFFFIPLLFLAVKVALVIGLVLFAFWFFKKNDKKGDTPAE*
Ga0066672_102898642	3300005167	Soil	MFKPILQLAAVGLAGFALWKLGSFFFIPLLFLAVKVALVVGLVLLAFWFFKKSDKKGDTPAE*
Ga0066677_100030427	3300005171	Soil	KPILQLAAVGLFGFALWKLGSLFLLPLLFLALKVALVVGLVLFAVWFFKKHDDKKGDAASE*
Ga0066677_100043177	3300005171	Soil	MSKPLLQLAALGLLGFSLWKVGSFFFIPLLFLAFKIAFVVGIVLFAVWLFKRNDGKKASDDSETGAA*
Ga0066677_100224813	3300005171	Soil	MSKPLLQLAALGLLGFSLWKVGSLFFVPLLFLAFKIALVVGIVLFAVWLFKRNDGNKASDSETGSS*
Ga0066683_100071217	3300005172	Soil	VPLAIEPPMSKPVLQLAAVGLVGFALWKLGSFFFIPLLVLAVKVALVVGLVLFAFWLFRKSDKDNKDNKGDAPAE*
Ga0066683_102782661	3300005172	Soil	MFKPILQLAAVGLAGFALWKLGSFFFIPLLFLAVKVALVVGLVLLAFWFFKKSEKKGDTPAE*
Ga0066683_108522832	3300005172	Soil	MFKPILQLAAVGLAGFALWKLGSFFFIPLLFLALKVALVVGLVLFAFWFFNKKNDKKGDTPAE*
Ga0066680_101749753	3300005174	Soil	MSKPILQLAALGLLGLSLWKVGSLFFIPLLFLVLKIALVVGIVLFAVWLFKRNDRKGTSDSETGST*
Ga0066680_104863991	3300005174	Soil	QLAAVGLAGFALWKLGSFFFIPLLFLAVKVALVIGLVLFAFWFFKKNDKKGDTPAE*
Ga0066680_107142121	3300005174	Soil	MFKPILQLAAVGLAGLALWKLGSFFFFPLLFLALKLALVVGLVLFAFWFFNKKNDKKGDTPAE*
Ga0066673_100395344	3300005175	Soil	AALGLLGLSLWKLGSFFFIPLVFLVLKVALVVGIVLFAVWLFKRNDRKGTSDSETGSA*
Ga0066679_105807431	3300005176	Soil	MSKPLLQLAALGVLGFSLWKLGSFFFIPLLFLSLKIALVVGVVLFAVWLFKRNDRKGTSDSETGTS*
Ga0066690_100053397	3300005177	Soil	MSKPLLQLAALGLLGFSLWKVGSFFFIPLLFLAFKIALVVGIVLFAVWLFKRNDGKKASDDSETGAA*
Ga0066690_100945724	3300005177	Soil	MSKPLLQLAALGVLGFSLWKLGSFFFIPLLFLALKIALVVGVVLFAVWLFKRNDRKGTSDSETGTS*
Ga0066690_102266242	3300005177	Soil	MSKPLLQLAALGLLGFSLWKVGSLFFIPLLFLAFKIALVVGIVLFAVWLFKRNDGKKASDSETGSS*
Ga0066690_105732212	3300005177	Soil	MFKPILQLAAVGFAGFALWKLGSFFFFPLLFLALKLALVVGLVLFAFWFFNKKND
Ga0066688_100410402	3300005178	Soil	MFKPILQLAAVGFAGFALWKLGSFFFFPLLFLALKLALVVGLVLFAFWFFNKKNDKKGDTPAE*
Ga0066684_100830721	3300005179	Soil	MSKPLLQLAALGLLGFSVWKVGSLFFIPLLFQAFKIALVVGIVLFAVWLFKRNDGKKASDSETGSS*
Ga0066675_105383242	3300005187	Soil	MSKPILQLAALGLLGLSLWKLGSFLFIPLVFLVLKIALVVGIVLFAVWLFKRNDRKGTSDSETGSA*
Ga0066675_105902962	3300005187	Soil	MSKPLLQLAALGLLGFSLWKVGSLFFIPLLFLAFKIALVVGIVLFAVWLFKRNDGKKASDSE
Ga0070709_103467202	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSKPLLQLAGLGLVGFSLWKLGSFFFVPLLLLALKIALVVGIVLFALWLFKRNGEKGASDSKTGPA*
Ga0070713_1004388623	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSKPLLQLAGLGLVGFSLWKLGSFFFVPLLLLALKIALVVGIVLFALWLFKRNG
Ga0070713_1009761532	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSKPLLQLAGLGLVGFSLWKLGSFFFVPLLFLALKIALVVGIVLFALWLFKRNGDKGASDSKTGPA*
Ga0066686_105637391	3300005446	Soil	MFKPILQLAAVGLAGFALWKLGSFFFFPLLFLALKLALVVGLVLFAFWFFKKNDKKGDTPAE*
Ga0066682_1000056711	3300005450	Soil	MFKPVLQLAAVGLVGFALWKLGSFFFIPLLVLAVKVALVVGLVLFAFWLFKKSDKDNKGDAPAE*
Ga0066682_102356952	3300005450	Soil	MFKPILQLAAVGLAGFALWKLGSFFFIPLLFLAVKLALVVGLVLFAFWFFNKKNDKKGDTPAE*
Ga0066681_100333561	3300005451	Soil	VLGFSLWKLGSFFFIPLLFLALKIALVVGVVLFAVWLFKRNDRKGASDSETGTS*
Ga0070707_1000702293	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSKPLLQLAALGLVGLSLWKLGAFFLIPLLFLALKIALVVGIVLFAVWLFKRNDKKGTSDSETGSA*
Ga0066697_102464102	3300005540	Soil	MFKPILQLAAVGLAGFALWKLGSFFFIPLLFLAVKLALVVGLVLLAFWFVKKSDKKGDTPAE*
Ga0066661_101400622	3300005554	Soil	MSKPLLQLAALGVLGFSLWKLGSFFFIPLLFLALKIALVVGVVLFAVWLFKRNDCKGASDSETGTS*
Ga0066661_104546641	3300005554	Soil	MFKPILQLATVGLAGFALWKLGSFFFFPLLFLALKLALVVGLVLFAFWFFNKKNDKKGDTPAE*
Ga0066704_101881202	3300005557	Soil	MSKPLLQLAALGLFGVSLWKLGSLFFIPLLLLALKIALVVGIVLFAVWLFKRNDGKATSDSETGSS*
Ga0066699_102880322	3300005561	Soil	MFKSILQLAAVGLAGFALWKLGSFFFIPLLFLAVKVALVIGLVLFAFWFFKKNDKKGDTPAE*
Ga0066699_108336042	3300005561	Soil	MFKPILQLAAVGLAGFALWKLGSFFFIPLLFLAVKVALVVGLVLLALWFFKKSDKKGDTPAE*
Ga0066705_103042132	3300005569	Soil	MSKPILQLAAVGLAGFALWKLGSFFFIPLLFLAVKVALVVGLVLLAFWFFKKSDKKGDTPAE*
Ga0066705_103591511	3300005569	Soil	MSKPILQLAALGFLGLSLWKLGSFFFIPLVFLVLKVALVVGIVLFAVWLFKRNDRKGTSD
Ga0066708_103740221	3300005576	Soil	ANPHYSGAPPMFKPILQLAAVGLAGFALWKLGSFFFIPLLFLAVKVALVVGLVLLAFWFFKKSDKKGDTPAE*
Ga0066654_100026476	3300005587	Soil	MSKPILQLDALGLLGLSLWKLGSFFFIPLVFLVLKVALVVGIVLFAVWLFKRNDRKGTSDSETGSA*
Ga0066654_103473773	3300005587	Soil	PKPILQLAAVGLFGFALWKLGSLFLLPLLFLALKVALVVGLVLFAVWFFKKHDDKKGDAASE*
Ga0079222_100074554	3300006755	Agricultural Soil	MSKPLLQLAALGIAGLAIWKVGSFFLLPLIFLAVKIAFVVALVLFAIWFFKRNDKNKDDDKATG*
Ga0079222_104148021	3300006755	Agricultural Soil	MSKPLLQLAAVGLVGFSLWKLGSLFFIPLLFLALKIALVVGIVLFAVWLFRRNDGKGASDAETGSS*
Ga0066659_100881942	3300006797	Soil	MSKPLLQLAALGVLGFSLWKVGSFFFIPLLFLALKIALVVGVVLFAVWLFKRNDRKGASDSETGTS*
Ga0066659_102908412	3300006797	Soil	MSKPLLQLAALGLLGFSVWKVGSLFFIPLLFLAFKIALVVGIVLFAVWLFKRNDGNKASDSETGSS*
Ga0066659_108202182	3300006797	Soil	MSKPILQLAALGLLGLSLWKLGSFFFIPLVFLVLKVALVVGIVLFAVWLFKRNDRKGTSDSETGST*
Ga0066660_103590862	3300006800	Soil	MSKPILQLAALGLLGLSLWKLGSFFFIPLVFLVLKVALVVGIVLFAVWLFKRSDRKGTSDSETGSA*
Ga0079221_100408343	3300006804	Agricultural Soil	MSKPLLQLAALGIAGLAIWKVGSFFLLPLIFLAVKIAFVVALVLFAIWFFKRNDKTKDDDKATG*
Ga0079221_105011172	3300006804	Agricultural Soil	MSKPLLQLAAVGLVGFSLWKLGSLFFIPLLFLALKIALVVGIVLFAVWLFKRNDRKGTSDSETGPA*
Ga0075425_1002472432	3300006854	Populus Rhizosphere	MSKPLLQLAAVGLVGFSLWKLGSLFFIPLLFLALKIALVVGIVLFAVWFFRRNDRKGTSDSETGPA*
Ga0099793_100014342	3300007258	Vadose Zone Soil	MSKPILQFAAVGLVGFALWKLGSFFFIPLLFLALKVALVVGLVLFAFWFFKKHDDKKSDAASE*
Ga0066710_1001595914	3300009012	Grasslands Soil	MFKPILQLAAVGLAGFALWKLGSFFFIPLLFLAVKVALVVGLVLLAFWFFNKKNDKKGDTPAE
Ga0066710_1003248184	3300009012	Grasslands Soil	LLGLSLWKLGSFFFIPLVFLVLKVALVVGIVLFAVWLFKRNDRKGTSDSETGSA
Ga0066709_1038495771	3300009137	Grasslands Soil	LAAVGLAGFALWKLGSFFFIPLLFLAVKVALVVGLVLLAFWFFKKSDKKGDTPAE*
Ga0134082_100439272	3300010303	Grasslands Soil	MSKPLLQLAALGLLGFSLWKVGSLFFIPLLFLAFKIALVVGIVLFAVWLFKRNDGKKASDSESGSS*
Ga0134082_100700823	3300010303	Grasslands Soil	MFKPILQLAAVGLAGFALWKLGSFFFFPLLFLALKLALVVGLVLFAFWFFNKKNDKKGDTPA
Ga0134088_100017775	3300010304	Grasslands Soil	MSKPVLQLAAVGLVGFALWKLGSFFFIPLLVLAVKVALVVGLVLFAFWLLRKSDKDNKDNKGDAPAE*
Ga0134109_100051903	3300010320	Grasslands Soil	MSKPILLLAALGLLGLSLWKLGSFFFIPLVFLVLKVALVVGIVLFAVWLFKRNDRKGTSDSETGSA*
Ga0134109_101609202	3300010320	Grasslands Soil	MFKPVLQLAAVGLVGFALWKLGSFFFIPLLVLAVKVALVVGLVLFAFWLFRKSDKDNKDNKGDAPAE*
Ga0134067_101384192	3300010321	Grasslands Soil	AAVGLVGFALWKLGSFFFIPLLVLAVKVALVVGLVLFAFWLFRKSDKDNKDNKDNKGDAPAE*
Ga0134084_100642311	3300010322	Grasslands Soil	MPKPILQLAAVGLFGFALWKLGSLFLLPLLFLALKVALVVGLVLFAVWFFKKHDDKK
Ga0134064_102016752	3300010325	Grasslands Soil	MSKPILQLAAVGLAGFALWKLGSFFFIPLLFLAVKVALVVGLVLLAFWFFKKSEKKGDTPAE*
Ga0134065_100682491	3300010326	Grasslands Soil	MSKPLLQLAALGLLGFSLWKVGSLFFIPLLFLAFKIALVVGIVLFAVWLFKRNDGKKASDSESG
Ga0134065_103050591	3300010326	Grasslands Soil	MFKPILQLAAVGLAGFALWKLGSFFFIPLLFLALKLALVVGLVLFAFWFFKKNDKKGDTPAE*
Ga0134080_100011896	3300010333	Grasslands Soil	MPKPILQLAAVGLAGFALWKLGSFFFIPLLFLALKVALVVGLVLFAVWFFKKHDDKKGDAASE*
Ga0134063_101412312	3300010335	Grasslands Soil	MFKPILQLAAVGLAGFALWKLGSFFFIPLLFLAVKVALVVGLVLFAFWFFKKNDKKGDTPAE*
Ga0134071_100024718	3300010336	Grasslands Soil	MPKPILQLAAVGLFGFALWKLGSFFFIPLLFLALKVALVVGLVLFAVWFFKKHDDKKGDAASE*
Ga0137364_100400743	3300012198	Vadose Zone Soil	VTRTKESLMSKPILQLAALGLLGLSLWKLGSFFFIPLVFLVLKVALVVGIVLFAVWLFKRNDRKGTSDSETGSA*
Ga0137365_101203433	3300012201	Vadose Zone Soil	MSKPLLQLAALGVLSFSLWKLGSFFFIPLLFLALKIALVVGVVLFAVWLFKRNDRKGASDSETGTS*
Ga0137377_108522882	3300012211	Vadose Zone Soil	MFKPILQLAAVGLAGLALWKLGSFFFIPLLFLAVKLALVVGLVLFAFWFFNKKNDKKGDTPAE*
Ga0134028_12812701	3300012224	Grasslands Soil	PMSKPVLQLAAVGLVGFALWKLGSFFFIPLLVLAVKVALVVGLVLFAFWLFRKSDKDNKDNKGDAPAE*
Ga0137386_101063151	3300012351	Vadose Zone Soil	MSKPVLQLAAVGLVGFALWKLGSFFFIPLLVLAVKVALVVGLVLFAFWLFKKSDKDNKGDAPAE*
Ga0134022_10152142	3300012371	Grasslands Soil	MSKPLLQLAALGVLGFSLWKLGSFFFIPLLFLGLKIALVVGIVLFAVWLFKRNDRKGASDSE
Ga0134037_11725321	3300012372	Grasslands Soil	IEPPMSKPVLQLAAVGLVGFALWKLGSFFFIPLLVLAVKVALVVGLVLFAFWLLRKSDKDNKDNKGDAPAE*
Ga0134032_10991141	3300012376	Grasslands Soil	IEPPMSKPVLQLAAVGLVGFALWKLGSFFFIPLLVLAVKVALVVGLVLFAFWLFRKSDKDNKDNKGDAPAE*
Ga0134023_11477052	3300012385	Grasslands Soil	MSKPILQLAALGLLGLSLWKLGSFLFIPLVFLVLKIALVVGIVLFAVWLFKRNDRKG
Ga0134052_12647902	3300012393	Grasslands Soil	MTKPFLQLAAVGLVGFALWKLGSFFFIPLLVLAVKVALVVGLVLFAFWLFKKSDKDNKGDAPAE*
Ga0134048_10390611	3300012400	Grasslands Soil	SGAPPMFKPILQLAAVGLAGFALWKLGSFFFIPLLFLALKLALVVGLVLFAFWFFNKKNDKKGDTPAE*
Ga0134048_13718712	3300012400	Grasslands Soil	EPPMSKPVLQLAAVGLVGFALWKLGSFFFIPLLVLAVKVALVVGLVLFAFWLFRKSDKDNKDNKGDAPAE*
Ga0134049_12232522	3300012403	Grasslands Soil	LAAVGLAGFALWKLGSFFFIPLLFLALKLALVVGLVLFAFWFFKKNDKKGDTPAE*
Ga0137398_100007853	3300012683	Vadose Zone Soil	MSKPLLQLAALGVLGFSLWKLGSFFFIPLLFLALKIAFVVGIVLFAVWLFKRNDRKGASDSETGIS*
Ga0134077_105313841	3300012972	Grasslands Soil	MFKPILQLAAVGLAGLALWKLGSFFFIPLLFLAVKVALVVGLVLFAFWFFKKNDKKGDTPAE*
Ga0134076_100014208	3300012976	Grasslands Soil	FALWKLGSFFFIPLLVLAVKVALVVGLVLFAFWLLRKSDKDNKDNKGDAPAE*
Ga0134075_101247602	3300014154	Grasslands Soil	MSKPILQLAALGLLGLSLWKVGSLFFIPLLFLVLKIALVVGIVLFAVWLFKRNDRKGTSDSETGSA*
Ga0134075_101405623	3300014154	Grasslands Soil	MSKPILQLAAVGLAGFALWKLGSFFFIPLLFLALKVALVVGLVLFAVWFFKKHDDKKGDAASE*
Ga0134078_100103514	3300014157	Grasslands Soil	LAGFALWKLGSFFFIPLLFLALKVALVVGLVLFAFWFFNKKNDKKGDTPAE*
Ga0134078_105088992	3300014157	Grasslands Soil	AVGLAGFALWKLGSFFFIPLLFLAVKVALVVGLVLLALWFFKKSDKKGDTPAE*
Ga0134074_11066451	3300017657	Grasslands Soil	MFKPILQLAAVGLAGFALWKLGSFFFIPLLFLAVKLALVVGLVLFAFWFFNKKNDKKGDTPAE
Ga0066655_100056367	3300018431	Grasslands Soil	MSKPILQLAALGLLGLSLWKLGSFFFIPLVFLVLKVALVVGIVLFAVWLFKRNDRKGTSDSETGSA
Ga0066655_101146553	3300018431	Grasslands Soil	MSKPLLQLAALGVLGFSLWKLGSFFFIPLLFLALKIALVVGVVLFAVWLFKRNDRKGASDSETGTS
Ga0066655_105504252	3300018431	Grasslands Soil	MFKPILQLAAVGLAGFALWKLGSFFFIPLLFLALKLALVVGLVLFAFWFFKKNDKKGDTPAE
Ga0066655_109482192	3300018431	Grasslands Soil	MSKPVLQLAAVGLVGFALWKLGSFFFIPLLVLAVKVALVVGLVLFAFWLFRKSDKDNKDNKGDAPAE
Ga0066667_105156422	3300018433	Grasslands Soil	MFKPILQLAAVGLAGFALWKLGSFFFIPLLFLAVKLALVVGLVLLAFWFVKKSDKKGDTPAE
Ga0066667_108273381	3300018433	Grasslands Soil	MSKPILQLAALGLLGLSLWKVGSLFFIPLLFLVLKIALVVGIVLFAVWLFKRNDRKGTSDSETGST
Ga0066667_108768192	3300018433	Grasslands Soil	MSKPLLQLAALGVLGFSLWKLGSFFFIPLLFLALKIALVVGIVLFAVWLFKRNDRKGASDSETGTS
Ga0066662_100342253	3300018468	Grasslands Soil	MSKPLLQLAALGLVGLSLWKLGAFFFIPLLFLALKIALVVGIVLFAVWLFKRNDKKGTSDSETGSA
Ga0066662_100411402	3300018468	Grasslands Soil	MFKPILQLAAVGLAGFALWKLGSFFFFPLLFLALKLALVVGLVLFAFWFFNKKNDKKGDTPAE
Ga0066662_101285711	3300018468	Grasslands Soil	MFKPILQLAAVGLAGFALWKLGSFFFIPLLFLAVKVALVIGLVLFAFWFFKKNDKKGDTPAE
Ga0066662_109755892	3300018468	Grasslands Soil	RAKESLMSKPILQLAALGLLGLSLWKVGSLFFIPLVFLVLKIALVVGIVLFAVWLFKRNDRKGASDSETGST
Ga0066669_100134883	3300018482	Grasslands Soil	MFKPILQLAAVGLAGFALWKLGSFFFIPLLFLAVKVALVVGLVLLAFWFFKKSEKKGDTPAE
Ga0066669_103438932	3300018482	Grasslands Soil	MSKPILQLAAVGLAGFALWKLGSFFFIPLLFLAVKVALVVGLVLLAFWFFKKSDKKGDTPAE
Ga0066669_106603312	3300018482	Grasslands Soil	MSKPLLQLAALGLLGFSLWKVGSLFFIPLLFLAFKIALVVGIVLFAVWLFKRNDGKKASDSESGSS
Ga0066669_113678262	3300018482	Grasslands Soil	MSKPILQLAALGLLGLSLWKLGSFLFIPLVFLVLKIALVVGIVLFAVWLFKRNDRKGTSDSETGSA
Ga0066669_121362692	3300018482	Grasslands Soil	MSKPILQLAALGLLGFSLWKLGSFFLIPMLFLALKMAFVVGIVMFAVWLFKRNDRRGASDSETGSS
Ga0207653_100588282	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MSKPLLQLAALGLVGLSLWKLGAFFFIPLLFLALKIALVVGIVLFAVWLFKRNDRKGTSDPGTGSA
Ga0207699_106572722	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSKPLLQLAGLGLVGFSLWKLGSFFFVPLLLLALKIALVVGIVLFALWLFKRNGEKGASDSKTGPA
Ga0207646_100329386	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSKPLLQLAALGLVGLSLWKLGAFFLIPLLFLALKIALVVGIVLFAVWLFKRNDKKGTSDSETGSA
Ga0207646_104374252	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSKPLLQLAALGLVGLSLWKLGAFFFIPLLFLALKIALVVGIVLFAVWLFKRNDKKGTTDSETGSA
Ga0209350_10000501	3300026277	Grasslands Soil	MPKPILQLAAVGLFGFALWKLGSLFLLPLLFLALKVALVVGLVLFAVWFFKKHDDKKGDAASE
Ga0209350_10001221	3300026277	Grasslands Soil	MFKPILQLAAVGLAGFALWKLGSFFFIPLLFLALKVALVVGLVLFAVWFFKKHDDKKGDAASE
Ga0209350_10062414	3300026277	Grasslands Soil	MSKPLLQLAALGVLGFSLWKLGSFFFIPLLFLSLKIALVVGVVLFAVWLFKRNDRKGTSDSETGTS
Ga0209234_100023313	3300026295	Grasslands Soil	MSKPILQLAALGLLGFSLWKLGSFFFIPMLFLALKMAFVVGIVMFAVWLFKRNDRKGASDSETGSS
Ga0209234_10075803	3300026295	Grasslands Soil	MSKPILQLAAVGLAGFALWKLGSFFFIPLLFLAVKVALVVGVVLLAFWFFKKSDKKGDTPAE
Ga0209234_10130172	3300026295	Grasslands Soil	MSKPLLQLAALGVLGFSLWELGSFFFIPLLFLALKIALVVGVVLFAVWLFKRNDRKGASDSETGTS
Ga0209235_10045886	3300026296	Grasslands Soil	MSKPILQLAAVGLVGFALWKLGSFFFIPLLVLAVKVALVVGLVLFAFWLFRKSDKDNKGDAPAE
Ga0209237_10034664	3300026297	Grasslands Soil	MSKPVLQLAAVGLVGFALWKLGSFFFIPLLVLAVKVALVVGLVLFAFWLFKKSDKDNKGDAPAE
Ga0209237_10592072	3300026297	Grasslands Soil	MSKPILQLAALGLLGLSLWKVGSLFFIPLVFLVLKIALVVGIVLFAVWLFKRNDRKGASDSETGST
Ga0209236_10226104	3300026298	Grasslands Soil	MSKPVLQLAAVGLVGFALWKLGSFFFIPLLVLAVKVALVVGLVLFAFWLFRKSDKDNKGDAPAE
Ga0209238_10087175	3300026301	Grasslands Soil	MSKPMLQLAALGLLGFSLWKLGSFFFIPMLFLALKMAFVVGIVMFAVWLFKRNDRKGASDSETGSS
Ga0209468_10375932	3300026306	Soil	MFKPVLQLAAVGLVGFALWKLGSFFFIPLLVLAVKVALVVGLVLFAFWLFKKSDKDNKGDAPAE
Ga0209469_10006024	3300026307	Soil	MPKPILQLAAVGLAGFALWKLGSFFFIPLLFLALKVALVVGLVLFAVWFFKKHDDKKGDAASE
Ga0209055_10121363	3300026309	Soil	MFKPILQLATVGLAGFALWKLGSFFFFPLLFLALKLALVVGLVLFAFWFFNKKNDKKGDTPAE
Ga0209055_12376552	3300026309	Soil	MSKPLLQLAALGVLGFSLWKLGSFFFIPLLFLALKIALVVGVVLFAVWLFKRN
Ga0209239_11909372	3300026310	Grasslands Soil	MSKPLLQLAALGLLGFSLWKVGSFFFIPLLFLAFKIALAVGIVLFAVWLFKRNDGKKASDDSETGAA
Ga0209153_10000603	3300026312	Soil	MSKPLLQLAALGLLGFSLWKVGSFFFIPLLFLAFKIAFVVGIVLFAVWLFKRNDGKKASDDSETGAA
Ga0209153_10221682	3300026312	Soil	MSKPLLQLAALGLLGFSLWKVGSLFFVPLLFLAFKIALVVGIVLFAVWLFKRNDGKKASDSETGSS
Ga0209268_10485272	3300026314	Soil	MFKPILQLAAVGLAGFALWKLGSFFFIPLLFLAVKVALVVGLVLLAFWFFKKSDKKGDTPAE
Ga0209686_100089513	3300026315	Soil	MSKPLLQLAALGLLGFSLWKVGSLFFVPLLFLAFKIALVVGIVLFAVWLFKRNDGNKASDSETGSS
Ga0209154_100033628	3300026317	Soil	MSKPLLQLAALGLLGFSLWKVGSFFFIPLLFLAFKIALVVGIVLFAVWLFKRNDGKKASDDSETGAA
Ga0209687_10020852	3300026322	Soil	MSKPLLQLAALGLLGFSVWKVGSLFFIPLLFLAFKIALVVGIVLFAVWLFKRNDGKKASDSETGSS
Ga0209801_12455001	3300026326	Soil	TKESLMSKPILQLAALGLLGLSLWKLGSFFFIPLVFLVLKVALVVGIVLFAVWLFKRNDRKGTSDSETGSA
Ga0209267_10996671	3300026331	Soil	MFKPILQLAAVGFAGFALWKLGSFFFFPLLFLALKLALVVGLVLFAFWFFNKKNDKKGDTPAE
Ga0209808_10278782	3300026523	Soil	MSKPLLQLAALGLLGFSLWKVGSLFFIPLLFLAFKIALVVGIVLFAVWLFKRNDGKKASDSETGSS
Ga0209808_10387531	3300026523	Soil	MSKPILQLAALGLLGLSLWKLGSFFFIPLVFLVLKVALVVGIVLFAVWLFKRND
Ga0209806_10165034	3300026529	Soil	MSKPILQLAALGLLGLSLWKLGSFFFIPLVFLVLKVALVVGIVLFAVWLFKRSDRKGTSDSETGSA
Ga0209807_10984921	3300026530	Soil	MSKPLLQLAALGVLGFSLWKLGSFFFIPLLFLALKIALVVGIVLFAVWLFKRNDRKGASDSE
Ga0209807_11343812	3300026530	Soil	MSKPILQLAALGFLGLSLWKLGSFFFIPLVFLVLKVALVVGIVLFAVWLFKRNDRKGTSDSETGSA
Ga0209805_11821821	3300026542	Soil	EANPHYSGAPPMFKPILQLAAVGLAGFALWKLGSFFFIPLLFLAVKVALVIGLVLFAFWFFKKNDKKGDTPAE
Ga0209076_10054642	3300027643	Vadose Zone Soil	MSKPILQFAAVGLVGFALWKLGSFFFIPLLFLALKVALVVGLVLFAFWFFKKHDDKKSDAASE
Ga0209073_100459603	3300027765	Agricultural Soil	MSKPLLQLAALGIAGLAIWKVGSFFLLPLIFLAVKIAFVVALVLFAIWFFKRNDKNKDDDKATG
Ga0209073_101581472	3300027765	Agricultural Soil	MSKPLLQLAAVGLVGFSLWKLGSLFFIPLLFLALKIALVVGIVLFAVWLFKRNDRKGTSDSETGPA
Ga0137415_102715911	3300028536	Vadose Zone Soil	MSKPILQLAAVGLAGFALWKLGSFFFIPLLFLALKVALVVGIVLFALWFFKKH
Ga0307471_1002606932	3300032180	Hardwood Forest Soil	MSKPLLQLAALGLVGVSLWKLGAFFFIPLLFLALKIALVVGIVLFAVWLFKRNDKKGTTDSETGSA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040576

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences