Metagenome Family F040716

Basic Information
Family ID	F040716
Family Type	Metagenome
Number of Sequences	161
Average Sequence Length	70 residues
Representative Sequence	MTLLRIGFAGSLALLFVVATQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA
Number of Associated Samples	129
Number of Associated Scaffolds	161

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	66.67 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	117
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Most Common Taxonomy
Group	Unclassified (98.137 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (11.180 % of family members)
Environment Ontology (ENVO)	Unclassified (24.224 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.342 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 64.65% β-sheet: 0.00% Coil/Unstructured: 35.35%
Feature Viewer

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Pfam ID	Name	% Frequency in 161 Family Scaffolds
PF01594	AI-2E_transport	23.60
PF13396	PLDc_N	8.07
PF13365	Trypsin_2	7.45
PF12263	DUF3611	6.83
PF13387	DUF4105	2.48
PF09851	SHOCT	1.86
PF01979	Amidohydro_1	1.86
PF05875	Ceramidase	1.24
PF07485	DUF1529	1.24
PF05209	MinC_N	1.24
PF14659	Phage_int_SAM_3	0.62
PF11737	DUF3300	0.62
PF13594	Obsolete Pfam Family	0.62
PF04039	MnhB	0.62
PF02518	HATPase_c	0.62

COG ID	Name	Functional Category	% Frequency in 161 Family Scaffolds
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	23.60
COG0850	Septum site-determining protein MinC	Cell cycle control, cell division, chromosome partitioning [D]	1.24
COG2111	Multisubunit Na+/H+ antiporter, MnhB subunit	Inorganic ion transport and metabolism [P]	0.62

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.14 %
All Organisms	root	All Organisms	1.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.14 %
cellular organisms	root	All Organisms → cellular organisms	1.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.14 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.14 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.14 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.24 %

Scaffold	Taxonomy	Length	IMG/M Link
3300001990\|JGI24737J22298_10000660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12192	Open in IMG/M
3300005713\|Ga0066905_100089655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2051	Open in IMG/M
3300010362\|Ga0126377_10043224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3889	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.49%
Host-Associated	Host-Associated	37.89%
Engineered	Engineered	0.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.76%
Plants	Host-Associated → Plants	37.89%
Aquatic	Environmental → Aquatic	3.73%
Solid Waste	Engineered → Solid Waste	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.53%
Marine	Environmental → Aquatic → Marine	1.86%
Sediment	Environmental → Aquatic → Sediment	1.24%
Freshwater	Environmental → Aquatic → Freshwater	0.62%
Roots	Host-Associated → Plants → Roots	0.62%
Grass	Engineered → Solid Waste → Grass	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.75%
Loam	Environmental → Terrestrial → Soil → Loam	13.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.66%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.07%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.73%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.24%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.62%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.62%
Composting	Engineered → Solid Waste → Grass → Composting	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.07%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.73%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.11%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.24%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.62%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.62%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.62%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.07%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.73%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.73%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.11%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.11%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	3.11%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.11%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.11%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.48%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.86%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.86%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.24%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.24%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.24%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.62%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.62%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.62%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300002077	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3	Host-Associated	Open in IMG/M
3300002126	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Host-Associated	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005213	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2	Environmental	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012497	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510	Host-Associated	Open in IMG/M
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014269	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1	Environmental	Open in IMG/M
3300014299	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300025580	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026018	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1 (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026452	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PU4	Environmental	Open in IMG/M
3300026740	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A1w-12 (SPAdes)	Environmental	Open in IMG/M
3300026787	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09K5-12 (SPAdes)	Environmental	Open in IMG/M
3300026803	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A1-12 (SPAdes)	Environmental	Open in IMG/M
3300027364	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes)	Host-Associated	Open in IMG/M
3300027425	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A2-10 (SPAdes)	Environmental	Open in IMG/M
3300027471	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwBSRL2_0644.00008420	2162886013	Switchgrass Rhizosphere	MTLSRIGFASLVALLFVVATESTGFAASPQCNAELRKCNSHCNLVYESKRANRVCRDRCKDKFYVCKARPA
deepsgr_01431790	2199352025	Soil	MTFSRIGFVSLLAFLFVVAMKSTGLAASPQCNAELRKCNSHCNLVYESKRANRTCRDRCKDSFYVCKAT
NODE_07261242	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MMLTRIGFASLLALSFVIATGSAGRAATPQCNAELRKCTSHCNLVYESKRSNRVCRDRCKDKFYVCKARPV*
AF_2010_repII_A100DRAFT_10037165	3300000655	Forest Soil	MTLSRIGIASLLALSFVIATGSAGRTATPQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARLG*
AF_2010_repII_A100DRAFT_10365171	3300000655	Forest Soil	GFASLLALSLVTATGSAGGAATPQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA*
JGI1027J11758_128387332	3300000789	Soil	MRFWPTNVVAILALIIAATSYPAFAAPAKCNAELRKCNSHCNLVYESKRANRVCRDRCKDTFYGCKARPR*
JGI24737J22298_100006602	3300001990	Corn Rhizosphere	MAAAAILALSVLAVTGHSGLGRYSEMQCGXEKVQQSLQLVYESGRANRTCRNRCKDNLYVCKARPS*
JGI24744J21845_100235831	3300002077	Corn, Switchgrass And Miscanthus Rhizosphere	MRHFPMAAAAILALSVLAVTGHSGLGRYSEMQCGLRKCNSHCNLVYESGRANRTCRNRCKDNLYVCKARPS*
JGI24035J26624_10014962	3300002126	Corn, Switchgrass And Miscanthus Rhizosphere	MRHFPMAAAAILALSVLAVTGHSGLAATPKCNADLRKCNSHCNLVYESGRANRTCRNRCKDNLYVCKARPS*
JGI25405J52794_100013664	3300003911	Tabebuia Heterophylla Rhizosphere	MKHWSTRLVAILALSFIMAQSHPAFSAPAKCNAELRKCNSHCNLVYESKRATRVCRDRCKDTFYGCKARPS*
Ga0062589_1001366861	3300004156	Soil	MTHFQMVALLALSFLAVTGHPGLAAPAKCNAELRKCNSHCNLVYESRQANRNCRNRCKDSFYVCKARPS*
Ga0062589_1002276731	3300004156	Soil	MTHVRIAANAILVFSFMVVMGFPALAAPAKCNAELRKCNSHCNLVYESGRANRSCRNRCKDNFYV
Ga0063356_1047638172	3300004463	Arabidopsis Thaliana Rhizosphere	MTLLRIGFAGSLALLFVIATQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA*
Ga0062595_1023075911	3300004479	Soil	MTHVRIAATAILVFSSMAVTGFPALAAPAKCNAELRKCNSHYNLVYESRQANRTCRNRCKDNFYVCKARPS*
Ga0066395_100185304	3300004633	Tropical Forest Soil	MTLSRIGFASLLALSLVTATGSAGGAATPQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA*
Ga0066395_100260371	3300004633	Tropical Forest Soil	MTLSRIGIASLLALSFVIATGSAGRTATPQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKTRLG*
Ga0066823_100092592	3300005163	Soil	MTLLRIGFAGSLALLFVIATQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYACKARPA*
Ga0066809_100430981	3300005168	Soil	MTLSRIVFASLLALLFVIATESAGVAASPQCNAELRKCNSHCNLVYESKRANRVCRDRCKDKFYVCKARPA*
Ga0068998_100183272	3300005213	Natural And Restored Wetlands	MMHFRMMAAAILALSFLAVTGHPGLAAPAKCNAELRKCNSHCNLVYESSRANRTCRNRCKDNFYVCKARPS*
Ga0068996_100599002	3300005218	Natural And Restored Wetlands	MMHFRMMAAAILALSFLAVTGHPGLAAPAKCNAELRKCNSHCNLVYESSRANRTCRNRCKDNFYVCKPRPS*
Ga0065712_102068811	3300005290	Miscanthus Rhizosphere	MRHFPMAAAAILALSVLAVTGHSGLAATPKCNAELRKCNSHCNLVYESGRANRTCRNRCKDNLYVCKARPS*
Ga0065705_103770221	3300005294	Switchgrass Rhizosphere	MTLSRIGFASLVALLFVVATESTGFAASPQCNAELRKCNSHCNLVYESKRANRVCRDRCKDKFYVCKARPA*
Ga0070658_107695922	3300005327	Corn Rhizosphere	MAAAAILALSVLAVTGHSGLAATPKCNAELRKCNSHCNLVYESGRANRTCRNRCKDNLYVCKARPS*
Ga0070683_1001432032	3300005329	Corn Rhizosphere	MTLLRIGFAGSLALLFVVATQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA*
Ga0070683_1018850332	3300005329	Corn Rhizosphere	MTLLRIGFAGSLALLFVIATQPAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYACKARPA*
Ga0070670_1000934572	3300005331	Switchgrass Rhizosphere	MTLLRIGFAGSLALLFVVASQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYACKARPA*
Ga0066388_1004822033	3300005332	Tropical Forest Soil	MTLLRIAFASSLALLFAVLAQSAGLAASPQCKAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKA*
Ga0066388_1008152943	3300005332	Tropical Forest Soil	MKHWRTGVVAMLALAFIVAAGHAALAARAQCNAELRKCNSHCNLVYESKRAHRVCRDRCKDTFYGCKARPS*
Ga0066388_1008424532	3300005332	Tropical Forest Soil	MTHVRIATAIFAFALMAATERPALAAPAKCNAELRKCNSHCHLVYESGRANRVCRDRCKDNFYACKARPS*
Ga0070682_1001534851	3300005337	Corn Rhizosphere	MTRARIAVPGIILFFLVTAIGFPAPAAPAKCNAELRKCTSHCNLVYESSRANRTCRTRCKDNFYACKARPS*
Ga0070668_1012328202	3300005347	Switchgrass Rhizosphere	FNNETGGHMRHFPMAAAAILALSVLAVTGHSGLAATPKCNAELRKCNSHCNLVYESGRANRTCRNRCKDNLYVCKARPS*
Ga0070671_1003289862	3300005355	Switchgrass Rhizosphere	TLLRIGFAGSLALLFVVATQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA*
Ga0070667_1000063481	3300005367	Switchgrass Rhizosphere	MRHFPMAAAAILALSVLAVTGHSGLAATPKCNAELRKCNSHCNLVYESGRANRTCRNRCKDNLYVCK
Ga0070701_100003522	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MAAAAILALSVLAVTGHSGLGRYSEMQCGSEKVQQSLQLVYESGRANRTCRNRCKDNLYVCKARPS*
Ga0070708_1006319292	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTLLRIGFAGSLAFLFIVVTQSAGLAASPQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYACKARPA*
Ga0070681_104898052	3300005458	Corn Rhizosphere	KRSRGICMTHARIAATAVIVFFFVTAIDFSALAAPAKCNAELRKCNSHCNLVYESGRANRTCRNRCKDNFYVCKARPS*
Ga0066905_1000896552	3300005713	Tropical Forest Soil	MKHWSTRFVAILALSFTMAQSHPAFAAPAKCNAELRKCNSHCNLVYESKRATRVCRDRCKDAFYGCKARPS*
Ga0066905_1000927412	3300005713	Tropical Forest Soil	MRLWQTDVVAILALIIAAMSYPALAAPAKCNAEFRKCNSHCNLVYESKRANRVCRDRCKDTFYGCKARPR*
Ga0066905_1002458062	3300005713	Tropical Forest Soil	MTHVRIVATAVFVFSLMMTIERPAFGAPAKCNAELRKCNSHCNLVYESARANRSCRKRCKDNFYVCKARPS*
Ga0066905_1006410271	3300005713	Tropical Forest Soil	MTLSKTGFVSLIALSLVIATGSAGRTATPQCNAELRNCNSHCNLVYESKRSNRVCRERCKDKFYVCKARPA*
Ga0066905_1010329261	3300005713	Tropical Forest Soil	MTLSKIGFASLLALSFVIATGSAGRTATPQCNAELRKCNSHCNLVYESKRSNRVCRERCKDKFYVCKARPA*
Ga0066903_1001185456	3300005764	Tropical Forest Soil	MKLSKTGFVSLIALSLVIATGSAGRTATPQCNAELRNCNSHCNLVYESKRSNRVCRERCKDKFYVCKARPA*
Ga0066903_1020603732	3300005764	Tropical Forest Soil	MMLTRIGFASLLALSFVIATGSAGRAATPQCNAELRKCTSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA*
Ga0068863_1016297632	3300005841	Switchgrass Rhizosphere	MTLLRIGFACSLALLFVVAPQSAGLAASPQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA*
Ga0081455_1000204811	3300005937	Tabebuia Heterophylla Rhizosphere	MTHFQMVATAIFALSFLAVTGHSGLAATPKCNAEFRKCNSHCNLVYESSRASRTCRNRCKDNFYVCKARPS*
Ga0081455_100581011	3300005937	Tabebuia Heterophylla Rhizosphere	MKHWSTRLVAIVALSFIMAEGHPAFAAPAKCNAELRKCNSHCNLVYESKRSNRVCRDRCKDTFYVCKARPS*
Ga0081540_10476355	3300005983	Tabebuia Heterophylla Rhizosphere	MRLWQTNVVAILALIIAAMSYPALAAPAKCNAELRKCNSHCNLVYESKRANRVCRDRCKDTFYGCKA
Ga0081540_11291912	3300005983	Tabebuia Heterophylla Rhizosphere	MKHWSTRLVAILALSFIMAQSHPALAAPAKCNAELRKCNSHCNLVYESKRATRVCRDRCKDTFYGCKARPS*
Ga0075024_1000792702	3300006047	Watersheds	MTLSRTVFASLLALLFVIATESAGRAASPQCNAELRKCNSHCNLVYESKRANRVCRDRCKDKFYVCKARPV*
Ga0075427_100195202	3300006194	Populus Rhizosphere	MRFWPTNVVAILALIIAATYPAFAAPAKCNAELRKCNSHCNLVYESKRANRVCRDRCKDTFYGCKARPR*
Ga0097621_1005695223	3300006237	Miscanthus Rhizosphere	MTLLRIGFAGSLALLFVVATQSEGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA*
Ga0079220_116634842	3300006806	Agricultural Soil	MTLLRIGFACSLALLFVVATQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA*
Ga0075421_1025480272	3300006845	Populus Rhizosphere	MKHWSTRLVAILALSFTMAQSHPAFAAPAKCNAELRKCNSHCNFVYESKRASRVCRDRCKDAF
Ga0075425_1006732542	3300006854	Populus Rhizosphere	MFVISFMMTIELPALAAPAKCNAELRKCTSHCNLVYESSRANRTCRNRCKDNFYVCKARPS*
Ga0075434_1003400702	3300006871	Populus Rhizosphere	MTHVRIAATAMFVISFMMTIELPALAAPAKCNAELRKCTSHCNLVYESSRANRTCRNRCKDNFYVCKARPS*
Ga0075426_101705321	3300006903	Populus Rhizosphere	QEICMTLLRIGFACSLALLFVVAPQSAGLAASPQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA*
Ga0075424_1001114593	3300006904	Populus Rhizosphere	MKHWSTRLVAILALSFTMAQSHPAFAAPAKCNVELRKCNSHCNFVYESKRASRVCRDRCKDAFYACKARPS*
Ga0075424_1003161031	3300006904	Populus Rhizosphere	CREICMTLSRIGFASLVALLFVVATESTGFAASPQCNAELRKCNSHCNLVYESKRANRVCRDRCKDKFYACKARPA*
Ga0079219_120456001	3300006954	Agricultural Soil	PLVQCVGVIGLAILAPMTHARIAAIALLVLSSMAMTGFPAPAAPAKCNAELRKCNSHCNLVYESSRANRTCRSRCKDDFYVCKARPG*
Ga0075435_1000339813	3300007076	Populus Rhizosphere	MTHVRIAATAMFVISFMMTIEPPALAAPAKCNAELRKCTSHCNLVYESSRANRTCRNRCKDNFYVCKARPS*
Ga0105245_127396661	3300009098	Miscanthus Rhizosphere	MTLLRIGFAGSLALLFVVATQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKAR
Ga0114129_101745392	3300009147	Populus Rhizosphere	MKHWSTRLVAILALSFTMAQSHPAFAAPAKCNAELRKCNSHCNFVYESKRASRVCRDRCKDAFYACKARPS*
Ga0114129_117705152	3300009147	Populus Rhizosphere	IAATAMFVISFMMTIEPPALAAPAKCNAELRKCTSHCNLVYESSRANRTCRNRCKDNFYVCKARPS*
Ga0075423_108509982	3300009162	Populus Rhizosphere	VLFNNETGGHMRHFPMAAAAILALSVLAVTGHSGLAATPKCNAELRKCTSHCNLVYESSRANRTCRNRCKDNFYVCKARPS*
Ga0105237_105152612	3300009545	Corn Rhizosphere	MTLLRIGFAGSLALLFVIATQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYTCKARPA*
Ga0105238_105807223	3300009551	Corn Rhizosphere	MTLLRIGFAGSLALLFVIATQPAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA*
Ga0105249_114871412	3300009553	Switchgrass Rhizosphere	MTLLRIGFACSLALLFVVATQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKAR
Ga0126380_100005062	3300010043	Tropical Forest Soil	MNHWLTSLVAILALSFIMAGSHVAFSAPAKCNAELRKCNSHCNLVYESKRSNRVCRDRCKDTFYVCKARPS*
Ga0126380_100051906	3300010043	Tropical Forest Soil	MTLSRIGIASLLALSFVIATGSSGRTATPQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKTRLG*
Ga0126380_107340921	3300010043	Tropical Forest Soil	MTLSKTGFASLLALSFVIATGSAGRTATPQCNAELRKCNSHCNLVYESKRSNRVCRERCKDKFYVCKARPA*
Ga0126384_100225084	3300010046	Tropical Forest Soil	MTHSQFGFASSLVLLFLVSTESAGLAASAQCSVELRKCNSHCNLVYESKRANRVCRDRCKDTFYLCKARPS*
Ga0126384_121232701	3300010046	Tropical Forest Soil	MTHFQMVATAIFALSFLAVTGPSALAATPKCNAELRKCNSHCNLVYESARANRSCRKRCKDNFYVCKARPS*
Ga0126382_1000076110	3300010047	Tropical Forest Soil	MTHSQFSFASSLVLLFLVSTESAGLAASAQCSVELRKCNSHCNLVYESKRANRVCRDRCKDTFYLCKARPS*
Ga0126382_100428521	3300010047	Tropical Forest Soil	MRLWQTNVVAILALIIAAMSYPALAAPAKCNAELRKCNSHCNLVYESKRANRVCRDRCKDTFYGCKARPR*
Ga0126382_111180002	3300010047	Tropical Forest Soil	MTHFQMVATAIFALSFLAVTGPSALAATPKCNAELRKCNSHCNLVYESSRANRTCRNRCKDNFYACKARPR*
Ga0126382_117502911	3300010047	Tropical Forest Soil	MKHWRTGVVAMLALAFIVAAGHAALAARAQCNAELRKCNSHCNLVYESKRAHRVCRDRCKDTFYGCKA
Ga0126370_100509571	3300010358	Tropical Forest Soil	MTLSRIGIASLLVLSFVIATGSAGRTATPQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA*
Ga0126376_113028142	3300010359	Tropical Forest Soil	MTLSRIGIASLLVLSFVIATGSAGRTATPQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKTRLG*
Ga0126376_122594942	3300010359	Tropical Forest Soil	LTRIGFASLLALSFVIATGSAGRAATPQCNAELRKCNSHCNLVYESKRSNRVCRERCKDKFYVCKARPA*
Ga0126372_100069675	3300010360	Tropical Forest Soil	MTLSRIGIASLLVLSFVIATGSAGRAATPQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKTRLG*
Ga0126377_100432247	3300010362	Tropical Forest Soil	MKQESCMTHFPMAATAILVLSFLAVTGHSALAATPKCNAELRKCNSHCRLVYESGRANRVCRERCKDNFYACKARPS*
Ga0126377_100723305	3300010362	Tropical Forest Soil	MKHWSTRLVAILALSFTMAQSHPASAAPAKCNAELRKCNSHCNLVYESKRSNRVCRDRCKDTFYVCKARPS*
Ga0126377_100876592	3300010362	Tropical Forest Soil	MKLWCTSVVAILGLSFILAASNPAFAAPAKCNAELRKCNSHCNLVYESKRALRVCRDRCKDTFYACKARPY*
Ga0134125_105467332	3300010371	Terrestrial Soil	MTRARIAVPGIILFFLVTAIGFPAPAAPAKCNAELRKCTSHCNLVYESSRANRTCRTRCKDNFYACKARSR*
Ga0134128_112074772	3300010373	Terrestrial Soil	MTRARIAVPGIILFFLVTAIGFPAPAAPAKCNAELRKCTSQCNLVYESSRANRTCRTRCKDNFYACKARSR*
Ga0105239_127524272	3300010375	Corn Rhizosphere	MTRARIAVPGIILFFLVTAIGFPAPAAPAKCNAELRKCTSHCNLVYESSRANRTCRTRCKDNFYAC
Ga0134124_100760872	3300010397	Terrestrial Soil	MTHVRIAATAILAFSVVAITGFPALAAPAKCNAELRKCNSHCNLVYESSRANRTCRNRCKDNFYACKARPS*
Ga0126383_100354924	3300010398	Tropical Forest Soil	MTHSQFGFASSLVLLFLVSTESAGLAASAQCGVELRKCNSHCNLVYESKRANRVCRDRCKDTFYLCKARPS*
Ga0134127_107091802	3300010399	Terrestrial Soil	MTHVRIAANAILVFSFMVVMGFPALAAPAKCNAELRKCNSHCNLVYESGRANRSCRNRCKDNFYVCKVRPS*
Ga0134122_100670362	3300010400	Terrestrial Soil	MTHVRIAVTAVLAVSFLVFARHEGFAASAKCNSELRKCNSHCHLVYESGRANRVCRDRCKDNFYVCKARPR*
Ga0157319_10030232	3300012497	Arabidopsis Rhizosphere	MTLLRIGFACSLALLFVVATQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPT*
Ga0157354_10512152	3300012517	Unplanted Soil	MALLRIGFACSLALLFVVASRSEGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYV
Ga0164298_100331192	3300012955	Soil	MTLLRIGFAGSLALFFVIATQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYACKARPA*
Ga0164299_106133021	3300012958	Soil	MTLSRIGFASLVALLFVVATESTGFAASPQCNAELRKCNSHCNLVYESKRANRVCRDRCKDKFYV
Ga0126369_100648154	3300012971	Tropical Forest Soil	MTLSRIGIASLLALSFVIATGSAGRTATPQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKTRRG*
Ga0164308_103721021	3300012985	Soil	MTLLRIGFAGSLALLFVIATQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYACKARP
Ga0164307_103240942	3300012987	Soil	MTLSRIGLASLVALLFVVATESTGFAASPQCNAELRKCNSHCNLVYESKRANRVCRDRCKDKFYVCKARPA*
Ga0075302_10795231	3300014269	Natural And Restored Wetlands	MAAAILALSFLAVTGHPGLAAPAKCNAELRKCNSHCNLVYESSRANRTCRNRCKDNFYVCKARPN*
Ga0075303_10425222	3300014299	Natural And Restored Wetlands	MMHFRMMAAAILAVSFLAVTGHPGLAAPAKCNAELRKCNSHCNLVYESSRANRTCRNRCKDNFYVCKARPS*
Ga0182008_104753412	3300014497	Rhizosphere	MTLLRIGFAGSLALLFVVATQTEGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA*
Ga0157376_102602521	3300014969	Miscanthus Rhizosphere	MTLLRIGFAGSLALLFVIATQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCK
Ga0157376_123040061	3300014969	Miscanthus Rhizosphere	MTLLRIGFAGSLALLFVVATQSEGLAASAQCSAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA*
Ga0157376_126851152	3300014969	Miscanthus Rhizosphere	MTLLRIGFAGSLALLFVVASQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCK
Ga0173483_108530942	3300015077	Soil	MTHVRIAANAILVFSFMVVMGFPALAAPAKCNAELRKCNSHCNLVYESGRANRSCRNRCKDNFYVCKV
Ga0132258_101105546	3300015371	Arabidopsis Rhizosphere	MTHVRIAATAILAFSVVAITGFPALAAPAKCNVELRKCNSHCNLVYESSRANRACRNRCKDNFYVCKARPS*
Ga0132258_111185962	3300015371	Arabidopsis Rhizosphere	MRHFPMTATAILALSVLAVTGHSGLAATPKCNAELRKCNSHCNLVYESGRANRTCRNRCKDNLYVCKARPS*
Ga0132258_117291793	3300015371	Arabidopsis Rhizosphere	MTHARIAATTVIVFFFVTAIDFSALAAPAKCNAELRKCNSHCNLVYESGRANRTCRNRCKDNFYVCKARPS*
Ga0132256_1030386622	3300015372	Arabidopsis Rhizosphere	MHFRMTAASLLALSFLAVTGHLGLAAPAKCNAELSKCNSHCNLVYESSRANRTCRNRCKDNFYVCKARPS*
Ga0132257_1036145131	3300015373	Arabidopsis Rhizosphere	ILALSVLAVTGHSGLAATPKCNAELRKCNSHCNLVYESSRANRTCRNRCKDNFYVCKARPS*
Ga0132255_1042043791	3300015374	Arabidopsis Rhizosphere	MTHVRIAATAILVFSSMAVTGFPALAAPAKCNAELRKCNSHCNLVYESRQANRTCRNRCKDNFYVCKARPS*
Ga0187785_100093005	3300017947	Tropical Peatland	MTLLRIGFACSLALLFVVATQSAGLAASPQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA
Ga0187785_103008682	3300017947	Tropical Peatland	MTLTRIGFASLLALSFVIATGSAGRAATPQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA
Ga0187777_114534891	3300017974	Tropical Peatland	MTLLRIGFACSLALLFVVATQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA
Ga0173481_100361174	3300019356	Soil	MRHFPMAAAAILALSVLAVTGHSGLAATPKCNAELRKCNSHCNLVYESGRANRTCRNRCKDNLYVCKARPS
Ga0247799_10931431	3300023072	Soil	MTHVRIAANAILVFSFMAVTGFPALAAPAKCNAELRKCNSHCNLVYESGRANRSCRNRC
Ga0210138_10439772	3300025580	Natural And Restored Wetlands	RSRKGYMMHFRIMAAAILALSFLAVTGHPGLAAPAKCNAELRKCNSHCNLVYESSRANRTCRNRCKDNFYVCKARPS
Ga0207688_108950071	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MTLLRIGFAGSLALLFVVATQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCK
Ga0207699_105229353	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTLLRIGFAGSLALLFVVATQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYACKARPA
Ga0207645_101004632	3300025907	Miscanthus Rhizosphere	MTLLRIGFAGSLALLFVIATQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA
Ga0207707_102864452	3300025912	Corn Rhizosphere	MTHVRIAANAILVFSFMVVMGFPALAAPAKCNAELRKCNSHCNLVYESGRANRSCRNRCKDNFYVCKVRPS
Ga0207671_106295082	3300025914	Corn Rhizosphere	MTLLRIALLFVVAPQSAGLAASPQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA
Ga0207650_101828432	3300025925	Switchgrass Rhizosphere	MTLLRIGFAGSLALLFVVASQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA
Ga0207701_103213061	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTHFQMVALLALSFLAVTGHPGLAAPAKCNAELRKCNSHCNLVYESRQANRNCRNRCKDSFYVCKARPS
Ga0207690_105002202	3300025932	Corn Rhizosphere	FQMVALLALSFLAVTGHPGLAAPAKCNAELRKCNSHCNLVYESRQANRNCRNRCKDSFYVCKARPS
Ga0207706_105193092	3300025933	Corn Rhizosphere	MTHFQMVALLALSFLAVTGHPGLAVPAKCNAELRKCNSHCNLVYESRQANRNCRNRCKDSFYVCKARPS
Ga0207704_107244572	3300025938	Miscanthus Rhizosphere	MTLLRICFAGSLALLFVIATQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYACKARPA
Ga0207661_118677302	3300025944	Corn Rhizosphere	MTLLRIGFAGSLALLFVVATQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA
Ga0207679_112731462	3300025945	Corn Rhizosphere	MTRARIAVPGIILFFLVTAIGFPAPAAPAKCNAELRKCTSHCNLVYESSRANRTCRTRCKDNFYACKARPS
Ga0208418_10350612	3300026018	Natural And Restored Wetlands	MHFRIMAAAILALSFLAVTGHPGLAAPAKCNAELRKCNSHCNLVYESSRANRTCRNRCKDNFYVCKARPN
Ga0207678_118193461	3300026067	Corn Rhizosphere	GIRMTRARIAVPGIILFFLVTAIGFPAPAAPAKCNAELRKCTSHCNLVYESSRANRTCRTRCKDNFYACKARPS
Ga0207641_103496844	3300026088	Switchgrass Rhizosphere	MTLLRIGFAGSLALLFVIATQPAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDR
Ga0256821_10165001	3300026452	Sediment	MIHFRMMAAAILALSFLAVTGHPGLAAPAKCNAELRKCNSHCNLVYESSRANRTCRNRCKDNFYVCKARPS
Ga0207439_1015112	3300026740	Soil	MTHVRIAANAILVFSFMAVTGFPALAAPAKCNAELRKCNSHCNLVYESGRANRTCRNRCKDNLYVCKARPS
Ga0207633_1008011	3300026787	Soil	MRHFPMAAAAILALSVLAVTGHSGLAATPKCNAELRKCNSHCNLVYESGRANRTCRNRCK
Ga0207549_1072111	3300026803	Soil	MRHFPMAAAAILALSVLAVTGHSGLAATPKCNADLRKCNSHCNLVYESGRANRTCRNRCKDNLYVCKARPS
Ga0209967_10615982	3300027364	Arabidopsis Thaliana Rhizosphere	MHFRMTAAALLALPFLAITGHPGLAAPAKCNAELRKCNSHCNLVYESGRASRACRNRCKDNFYVCKARPS
Ga0207522_1029161	3300027425	Soil	RYVLFNNETGGHMRHFPMAAAAILALSVLAVTGHSGLAATPKCNAELRKCNSHCNLVYESGRANRTCRNRCKDNLYVCKARPS
Ga0209995_10415342	3300027471	Arabidopsis Thaliana Rhizosphere	MMHVRIAATTAIVFFFVATTDFSALAAPAKCNAELRKCNSHCNLVYESGRANRTCRNRCKDNLYVCKARPS
Ga0209966_10114532	3300027695	Arabidopsis Thaliana Rhizosphere	MRHFPMAAAAILALSVLAVTGHSGLAATPKCNAELRKCNSHCNLVYESGRASRACRNRCKDNFYVCKARPR
Ga0209814_100008322	3300027873	Populus Rhizosphere	MRFWPTNVVAILALIIAATSYPAFAAPAKCNAELRKCNSHCNLVYESKRANRVCRDRCKDTFYGCKARPR
Ga0209465_100125456	3300027874	Tropical Forest Soil	MTLSRIGIASLLVLSFVIATGSAGRTATPQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKTRLG
Ga0209974_100015967	3300027876	Arabidopsis Thaliana Rhizosphere	MRHFPMAAAAILALSVLAVTGHSGLAATPKCNAELRKCNSHCNLVYESGRANRTCRNRCKDNFYVCKARPS
Ga0209974_100421382	3300027876	Arabidopsis Thaliana Rhizosphere	MTHVRIAANAILVFSFVAVAGFSALAAPAKCNAELRKCNSHCNLVYESRQANRTCRNRCKDNFYVCKARPS
Ga0209069_101029421	3300027915	Watersheds	MTLSRTVFASLLALLFVIATESAGRAASPQCNAELRKCNSHCNLVYESKRANRVCRDRCKDKFYVCKARPV
Ga0307302_100457042	3300028814	Soil	MTHLRTVFAAMLALLFLVATEYPGFAAPAKCNAQLRKCNSHCNLVYESKRAIRVCRDRCKDTFYGCKAQPN
Ga0170824_1145432492	3300031231	Forest Soil	MTFSRIGFVSLLAFLFVVATKSTGLASSPQCNAELKKCNSHCNLVYESKRANRTCRDRCKDSFYVCKAT
Ga0310887_105446401	3300031547	Soil	MTLLRIGFACSLALLFVVAPQSAGLAASPQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA
Ga0310813_100542576	3300031716	Soil	MHFRITAAALLALPFLAITEHPGLAAPAKCNAELRKCNSHCNLVYESRQANRTCHNHCKDNFYVCKARPS
Ga0307469_114490371	3300031720	Hardwood Forest Soil	SRRGCMTNLPMAATAILALTFLAVMGHSGLAATPKCNAELRNCNSHCNLVYESGRAKRTCRNRCKDNFYGCKARPS
Ga0307468_1004935471	3300031740	Hardwood Forest Soil	MTLLRIGFAGSLALLFVIATQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYACKAR
Ga0318509_101371063	3300031768	Soil	MTLSRIGFASLLALSLVTATGSAGGAATPQCNAELRKCNSHCNLVYESKRSNRVCRDRCKVK
Ga0310907_101320931	3300031847	Soil	MTLLRIGFAGSLAFLFIVVTQSAGLAASPQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYTCKARPA
Ga0310892_103344112	3300031858	Soil	MTLLRIGFAGSLAFLFIVVTQSAGLAASPQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYACKARPA
Ga0308175_1004523452	3300031938	Soil	MAHFRATATMLLALSIVAVTAHPGLAASAKCNADLRMCNSHCRLVYESKQAKRVCRNRCKDDFYVCKAQPR
Ga0310899_107063771	3300032017	Soil	MTHVRIAANAILVFSFVAVAGFPALAAPAKCNAELRKCNSHCNLVYESRQANRTCRNRCKDNFYVCKARPG
Ga0307470_100050276	3300032174	Hardwood Forest Soil	MTLLRIGFAGSLALLLVIATQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYVCKARPA
Ga0307470_100601532	3300032174	Hardwood Forest Soil	MTHLPMAATAILALTFLAVMGHSGLAATPKCNAELRKCNSHCNLVYESGRAKRTCRNRCKDNFYGCKARPS
Ga0307471_1013647361	3300032180	Hardwood Forest Soil	MTLLRIGFAGSLALLLVIATQSAGLAASAQCNAELRKCNSHCNLVYESKRSNRVCRDRCKDKFYACKARPA
Ga0307471_1022983441	3300032180	Hardwood Forest Soil	CREICMTLSRIGFASLVALLFVVATESTGFAASPQCNAELRKCNSHCNLVYESKRANRVCRDRCKDKFYVCKARPA
Ga0335084_105682271	3300033004	Soil	MHFRTMAAAILALSFLAVTGHPGLAAPAKCNAELRKCNSHCNLVYESSRANRTCRNRCKDNFYVCKARPS
Ga0373950_0009336_1_177	3300034818	Rhizosphere Soil	MRHFPMAAAAILALSVLAVTGHSGLAATPKCNAELRKCNSHCNLVYESGRANRTCRNRC

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F040716

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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