Metagenome / Metatranscriptome Family F040723

Basic Information
Family ID	F040723
Family Type	Metagenome / Metatranscriptome
Number of Sequences	161
Average Sequence Length	57 residues
Representative Sequence	MSFHSYMVVFCAPIPIWDRELPILDPVAXVIAFKLHGEGIRGSQALSIALQ
Number of Associated Samples	87
Number of Associated Scaffolds	161

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	84.91 %
% of genes near scaffold ends (potentially truncated)	93.17 %
% of genes from short scaffolds (< 2000 bps)	98.76 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere (44.721 % of family members)
Environment Ontology (ENVO)	Unclassified (86.957 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (83.851 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.11% β-sheet: 0.00% Coil/Unstructured: 70.89%
Feature Viewer

Powered by Feature Viewer

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005355\|Ga0070671_101176547	Not Available	674	Open in IMG/M
3300005355\|Ga0070671_101475549	Not Available	601	Open in IMG/M
3300005367\|Ga0070667_102301117	Not Available	507	Open in IMG/M
3300005445\|Ga0070708_101464421	Not Available	636	Open in IMG/M
3300005466\|Ga0070685_10946349	Not Available	643	Open in IMG/M
3300005719\|Ga0068861_101708801	Not Available	622	Open in IMG/M
3300005841\|Ga0068863_102068334	Not Available	579	Open in IMG/M
3300005841\|Ga0068863_102184551	Not Available	563	Open in IMG/M
3300005842\|Ga0068858_101885900	Not Available	590	Open in IMG/M
3300005842\|Ga0068858_102318315	Not Available	531	Open in IMG/M
3300005842\|Ga0068858_102432515	Not Available	517	Open in IMG/M
3300005843\|Ga0068860_101902995	Not Available	616	Open in IMG/M
3300005843\|Ga0068860_102494974	Not Available	537	Open in IMG/M
3300005844\|Ga0068862_102251278	Not Available	556	Open in IMG/M
3300006189\|Ga0097681_1172551	Not Available	556	Open in IMG/M
3300010371\|Ga0134125_11629027	Not Available	702	Open in IMG/M
3300010371\|Ga0134125_13120510	Not Available	502	Open in IMG/M
3300010396\|Ga0134126_12875285	Not Available	521	Open in IMG/M
3300010397\|Ga0134124_12977054	Not Available	517	Open in IMG/M
3300010399\|Ga0134127_13205931	Not Available	534	Open in IMG/M
3300010403\|Ga0134123_11767200	Not Available	671	Open in IMG/M
3300015278\|Ga0182099_1056285	Not Available	545	Open in IMG/M
3300015280\|Ga0182100_1097968	Not Available	503	Open in IMG/M
3300015284\|Ga0182101_1021603	Not Available	825	Open in IMG/M
3300015284\|Ga0182101_1092030	Not Available	518	Open in IMG/M
3300015306\|Ga0182180_1047773	Not Available	642	Open in IMG/M
3300015310\|Ga0182162_1106932	Not Available	541	Open in IMG/M
3300015310\|Ga0182162_1119901	Not Available	518	Open in IMG/M
3300015312\|Ga0182168_1119224	Not Available	532	Open in IMG/M
3300015312\|Ga0182168_1127357	Not Available	518	Open in IMG/M
3300015313\|Ga0182164_1114764	Not Available	540	Open in IMG/M
3300015313\|Ga0182164_1117498	Not Available	535	Open in IMG/M
3300015317\|Ga0182136_1055857	Not Available	712	Open in IMG/M
3300015318\|Ga0182181_1103195	Not Available	524	Open in IMG/M
3300015319\|Ga0182130_1054240	Not Available	702	Open in IMG/M
3300015325\|Ga0182148_1077060	Not Available	641	Open in IMG/M
3300015327\|Ga0182114_1038866	Not Available	869	Open in IMG/M
3300015327\|Ga0182114_1093227	Not Available	632	Open in IMG/M
3300015327\|Ga0182114_1153268	Not Available	515	Open in IMG/M
3300015330\|Ga0182152_1134061	Not Available	533	Open in IMG/M
3300015331\|Ga0182131_1109508	Not Available	581	Open in IMG/M
3300015331\|Ga0182131_1138426	Not Available	528	Open in IMG/M
3300015332\|Ga0182117_1122441	Not Available	579	Open in IMG/M
3300015335\|Ga0182116_1065859	Not Available	763	Open in IMG/M
3300015335\|Ga0182116_1142889	Not Available	557	Open in IMG/M
3300015335\|Ga0182116_1162036	Not Available	527	Open in IMG/M
3300015338\|Ga0182137_1169893	Not Available	514	Open in IMG/M
3300015339\|Ga0182149_1110994	Not Available	608	Open in IMG/M
3300015340\|Ga0182133_1177382	Not Available	520	Open in IMG/M
3300015340\|Ga0182133_1189738	Not Available	505	Open in IMG/M
3300015348\|Ga0182115_1179564	Not Available	678	Open in IMG/M
3300015349\|Ga0182185_1192481	Not Available	616	Open in IMG/M
3300015349\|Ga0182185_1239722	Not Available	551	Open in IMG/M
3300015349\|Ga0182185_1258977	Not Available	530	Open in IMG/M
3300015352\|Ga0182169_1138661	Not Available	790	Open in IMG/M
3300015352\|Ga0182169_1212820	Not Available	631	Open in IMG/M
3300015352\|Ga0182169_1215834	Not Available	626	Open in IMG/M
3300015352\|Ga0182169_1228040	Not Available	607	Open in IMG/M
3300015352\|Ga0182169_1251732	Not Available	574	Open in IMG/M
3300015352\|Ga0182169_1309053	Not Available	508	Open in IMG/M
3300015352\|Ga0182169_1311887	Not Available	505	Open in IMG/M
3300015353\|Ga0182179_1215802	Not Available	613	Open in IMG/M
3300015353\|Ga0182179_1286634	Not Available	534	Open in IMG/M
3300015354\|Ga0182167_1275089	Not Available	602	Open in IMG/M
3300017412\|Ga0182199_1120645	Not Available	620	Open in IMG/M
3300017412\|Ga0182199_1207257	Not Available	500	Open in IMG/M
3300017414\|Ga0182195_1129659	Not Available	626	Open in IMG/M
3300017414\|Ga0182195_1175527	Not Available	554	Open in IMG/M
3300017432\|Ga0182196_1084563	Not Available	623	Open in IMG/M
3300017439\|Ga0182200_1151021	Not Available	518	Open in IMG/M
3300017440\|Ga0182214_1060137	Not Available	771	Open in IMG/M
3300017440\|Ga0182214_1113535	Not Available	585	Open in IMG/M
3300017440\|Ga0182214_1116374	Not Available	578	Open in IMG/M
3300017445\|Ga0182198_1091098	Not Available	685	Open in IMG/M
3300017445\|Ga0182198_1138426	Not Available	585	Open in IMG/M
3300017445\|Ga0182198_1138603	Not Available	585	Open in IMG/M
3300017445\|Ga0182198_1194227	Not Available	511	Open in IMG/M
3300017447\|Ga0182215_1071836	Not Available	751	Open in IMG/M
3300017447\|Ga0182215_1114294	Not Available	608	Open in IMG/M
3300017447\|Ga0182215_1131964	Not Available	570	Open in IMG/M
3300017691\|Ga0182212_1144039	Not Available	542	Open in IMG/M
3300017691\|Ga0182212_1156214	Not Available	520	Open in IMG/M
3300017692\|Ga0182210_1091996	Not Available	648	Open in IMG/M
3300017692\|Ga0182210_1120124	Not Available	574	Open in IMG/M
3300017693\|Ga0182216_1032604	Not Available	1038	Open in IMG/M
3300017693\|Ga0182216_1058621	Not Available	846	Open in IMG/M
3300017693\|Ga0182216_1094601	Not Available	708	Open in IMG/M
3300017693\|Ga0182216_1137901	Not Available	611	Open in IMG/M
3300020023\|Ga0182178_1016904	Not Available	559	Open in IMG/M
3300026088\|Ga0207641_11642632	Not Available	644	Open in IMG/M
3300028049\|Ga0268322_1017897	Not Available	733	Open in IMG/M
3300028050\|Ga0268328_1030765	Not Available	681	Open in IMG/M
3300028051\|Ga0268344_1001875	Not Available	1108	Open in IMG/M
3300028051\|Ga0268344_1004878	Not Available	828	Open in IMG/M
3300028052\|Ga0268300_1003735	Not Available	910	Open in IMG/M
3300028052\|Ga0268300_1004743	Not Available	789	Open in IMG/M
3300028056\|Ga0268330_1011201	Not Available	898	Open in IMG/M
3300028056\|Ga0268330_1015353	Not Available	814	Open in IMG/M
3300028056\|Ga0268330_1037929	Not Available	604	Open in IMG/M
3300028056\|Ga0268330_1049812	Not Available	547	Open in IMG/M
3300028056\|Ga0268330_1050662	Not Available	543	Open in IMG/M
3300028056\|Ga0268330_1052917	Not Available	535	Open in IMG/M
3300028056\|Ga0268330_1057021	Not Available	520	Open in IMG/M
3300028057\|Ga0268352_1036403	Not Available	546	Open in IMG/M
3300028058\|Ga0268332_1035952	Not Available	670	Open in IMG/M
3300028058\|Ga0268332_1060485	Not Available	557	Open in IMG/M
3300028058\|Ga0268332_1062885	Not Available	549	Open in IMG/M
3300028061\|Ga0268314_1043523	Not Available	545	Open in IMG/M
3300028062\|Ga0268342_1002376	Not Available	1285	Open in IMG/M
3300028062\|Ga0268342_1035182	Not Available	547	Open in IMG/M
3300028062\|Ga0268342_1035361	Not Available	546	Open in IMG/M
3300028064\|Ga0268340_1054179	Not Available	599	Open in IMG/M
3300028064\|Ga0268340_1057864	Not Available	585	Open in IMG/M
3300028140\|Ga0268334_1002159	Not Available	1024	Open in IMG/M
3300028140\|Ga0268334_1016574	Not Available	530	Open in IMG/M
3300028142\|Ga0268347_1015698	Not Available	644	Open in IMG/M
3300028142\|Ga0268347_1016708	Not Available	631	Open in IMG/M
3300028142\|Ga0268347_1028382	Not Available	537	Open in IMG/M
3300028143\|Ga0268348_1023405	Not Available	521	Open in IMG/M
3300028151\|Ga0268308_1003281	Not Available	1047	Open in IMG/M
3300028151\|Ga0268308_1026757	Not Available	543	Open in IMG/M
3300028154\|Ga0268341_1025101	Not Available	543	Open in IMG/M
3300028154\|Ga0268341_1026343	Not Available	535	Open in IMG/M
3300028154\|Ga0268341_1031103	Not Available	507	Open in IMG/M
3300028246\|Ga0268351_1012410	Not Available	826	Open in IMG/M
3300028246\|Ga0268351_1013056	Not Available	808	Open in IMG/M
3300028251\|Ga0268324_1011426	Not Available	648	Open in IMG/M
3300028253\|Ga0268316_1008495	Not Available	694	Open in IMG/M
3300028262\|Ga0268310_1020472	Not Available	686	Open in IMG/M
3300028262\|Ga0268310_1031480	Not Available	598	Open in IMG/M
3300028464\|Ga0268302_105245	Not Available	597	Open in IMG/M
3300028464\|Ga0268302_106769	Not Available	551	Open in IMG/M
3300028465\|Ga0268301_103499	Not Available	587	Open in IMG/M
3300028466\|Ga0268321_106079	Not Available	606	Open in IMG/M
3300028466\|Ga0268321_111441	Not Available	506	Open in IMG/M
3300028469\|Ga0268337_1002946	Not Available	871	Open in IMG/M
3300028471\|Ga0268323_1014045	Not Available	577	Open in IMG/M
3300028471\|Ga0268323_1020754	Not Available	513	Open in IMG/M
3300028472\|Ga0268315_1004445	Not Available	862	Open in IMG/M
3300028472\|Ga0268315_1005636	Not Available	810	Open in IMG/M
3300028472\|Ga0268315_1012101	Not Available	650	Open in IMG/M
3300028472\|Ga0268315_1028315	Not Available	500	Open in IMG/M
3300028473\|Ga0268319_1014799	Not Available	588	Open in IMG/M
3300028473\|Ga0268319_1016399	Not Available	570	Open in IMG/M
3300028474\|Ga0268331_1010228	Not Available	686	Open in IMG/M
3300028476\|Ga0268329_1019262	Not Available	574	Open in IMG/M
3300028477\|Ga0268309_1005507	Not Available	741	Open in IMG/M
3300028523\|Ga0268313_1013805	Not Available	566	Open in IMG/M
3300028527\|Ga0268335_1009650	Not Available	614	Open in IMG/M
3300028527\|Ga0268335_1012053	Not Available	575	Open in IMG/M
3300028529\|Ga0268311_1006902	Not Available	787	Open in IMG/M
3300028529\|Ga0268311_1017644	Not Available	594	Open in IMG/M
3300028529\|Ga0268311_1025147	Not Available	531	Open in IMG/M
3300028529\|Ga0268311_1025291	Not Available	530	Open in IMG/M
3300028529\|Ga0268311_1028382	Not Available	511	Open in IMG/M
3300028529\|Ga0268311_1030043	Not Available	501	Open in IMG/M
3300032465\|Ga0214493_1129117	Not Available	592	Open in IMG/M
3300032699\|Ga0214494_1111713	Not Available	505	Open in IMG/M
3300032918\|Ga0314726_132241	Not Available	574	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	93.79%
Environmental	Environmental	4.97%
Engineered	Engineered	1.24%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	93.79%
Terrestrial	Environmental → Terrestrial	4.97%
Bioreactor	Engineered → Bioreactor	0.62%
Bioremediation	Engineered → Bioremediation	0.62%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	85.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.21%
Soil	Environmental → Terrestrial → Soil	4.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.86%
Unclassified	Engineered → Bioreactor → Unclassified	0.62%
Hydrocarbon	Engineered → Bioremediation → Hydrocarbon	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	85.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	3.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.86%
Loam	Environmental → Terrestrial → Soil → Loam	1.24%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	0.62%
Unclassified	Engineered → Bioremediation → Hydrocarbon → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	85.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.24%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	0.62%
Unclassified	Engineered → Bioremediation → Hydrocarbon → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	44.72%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	40.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.21%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.62%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.62%
Switchgrass Degrading	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Switchgrass Degrading	0.62%
Wastewater Bioreactor	Engineered → Bioremediation → Hydrocarbon → Unclassified → Unclassified → Wastewater Bioreactor	0.62%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006189	Wastewater bioreactor microbial communities from Cape Town, South Africa - Thiocy_cont_750_plan - 1398105538144 (version 2)	Engineered	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012949	Switchgrass enrichment cultures co-assembly	Engineered	Open in IMG/M
3300015278	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015280	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015284	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015306	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015310	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015312	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015313	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015317	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015318	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015319	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015325	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015327	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015330	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015331	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015332	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015335	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015338	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015339	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015340	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015348	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015349	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015352	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015353	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015354	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017412	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017414	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017432	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017439	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017440	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017445	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017447	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017691	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017692	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017693	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300020023	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_22AUG2016_LD2 MG	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028049	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028050	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028051	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028052	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028056	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028057	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028058	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028061	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028062	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028064	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028140	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028142	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028143	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028151	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028154	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028246	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028251	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028253	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028262	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028464	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028465	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028466	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028469	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028471	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028472	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028473	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028474	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028476	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028477	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028523	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028527	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028529	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300032465	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032699	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032918	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_05JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070671_1011765471	3300005355	Switchgrass Rhizosphere	MSFHCYMVVLCAPFPIWDRELPILEPVAVIAFKLHGEGIRGSQALSIALQGAPDESFLYGPSR
Ga0070671_1014755491	3300005355	Switchgrass Rhizosphere	MSFHSYMLVFCAHIPIWDRELPILDPVAVIAFKLHGEGIRGPQALFIALQRAPDESFLFGPSRHVEYVWAKIP
Ga0070667_1023011171	3300005367	Switchgrass Rhizosphere	MSFHSYRVVFCAPLPIWDRELPILDTVAVIAFKLHGEGIRGSQALSIALQGAPDESFLYGPSR
Ga0070708_1014644211	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSFHSYMVVFCAPIPIWDRELPILDPVA*VIAFKLHREGIRG
Ga0070685_109463492	3300005466	Switchgrass Rhizosphere	MSFHSYRIVSVPLFQQDRELPILDAVAVIAFKLHGEGIRGSQACLSAYRDER
Ga0068861_1017088011	3300005719	Switchgrass Rhizosphere	MSFHSYMLVFCAHIPIWDRELPILDPVA*VIAFKLHGEGIRGPQ
Ga0068863_1020683341	3300005841	Switchgrass Rhizosphere	MRFYSYKVVFCAPIPIWDRELPILDPVA*VIAFKLHGEGI
Ga0068863_1021845511	3300005841	Switchgrass Rhizosphere	MIFHSYIVVFCAPIPIWDRELPILDPVAVIAFKLHGEGIRGSQALSIALQGAPDESFLYGPCRHMEHVWAKIPQFHRRLVGWAGAT
Ga0068858_1018859001	3300005842	Switchgrass Rhizosphere	MSFHSYMVVLCAPIPIWDRELPILDPVA*VIAFKLHGEGIRGS
Ga0068858_1023183152	3300005842	Switchgrass Rhizosphere	MSFHSYMVVFYAAIPRDRDLPILDPVACVIPFKLHGEGIRGSQALSIALQG*
Ga0068858_1024325152	3300005842	Switchgrass Rhizosphere	MSVHSYMAEFCAAIPRDRELPILDPVACVIPFKLHGEGIRGSQALSIALQG*
Ga0068860_1019029951	3300005843	Switchgrass Rhizosphere	MSFHSYMVVFCAPIPIWDRELPILDPVA*VIAFKLHGEGIRGS
Ga0068860_1024949741	3300005843	Switchgrass Rhizosphere	MSFHSYRVVFCASIPMGPRTPDLDPVSVIAFKLHEKGIRGSQALSIALQGAPDE
Ga0068862_1022512781	3300005844	Switchgrass Rhizosphere	MSFHSYRVVFCAPIPIWDRELPILDPVAVIAIKLHGEGIRGSQVLSIALQGAPDESFLYGPSRHV
Ga0097681_11725511	3300006189	Wastewater Bioreactor	MSFHSYMVVFCAPIPIWDRELPILDPVAVIAFKLHGEGIWGSQALSIALQGAPDESFLYGPSRHVEHVWAKIPQ
Ga0134125_116290271	3300010371	Terrestrial Soil	MSFHSYRVVFCAPIPIWDREVLILDPVA*VIAIKLHGEGIRGSQALS
Ga0134125_131205101	3300010371	Terrestrial Soil	MVVLCAPFPIWDRELPILEPVAVIAFKLHGEGIRGSQALSIALQGAPDESFLYGPSRH
Ga0134126_128752851	3300010396	Terrestrial Soil	MSFHSYMVVFCAPIPIWERELPILDPVA*VIAFKLP
Ga0134124_129770541	3300010397	Terrestrial Soil	MSFHSYRVLFCAPLPILDRELPILDPVA*VIAFKLHGEG
Ga0134127_132059311	3300010399	Terrestrial Soil	MSFHSYSVVFCTPLPIWDRELPILDPVAVIAFKLHGEGIRGSQALSIALQGALDE
Ga0134123_117672001	3300010403	Terrestrial Soil	MSVHSYRVVFCAPIPIWDRELPILDLVAVVAFKLHGEGIRGSQALSIALQG
Ga0153798_103016591	3300012949	Switchgrass Degrading	MSFHSYKVVFCAPIPTGLRSPDFGSYSMSYTFKLHGEGIRGYQALSIALQG*APDESFLYGPSRHVEHVWAKIPQFH
Ga0182099_10562851	3300015278	Switchgrass Phyllosphere	MSGVLYMSFHSYRVVFCAPIPIWDREVLILDPVAVIAIKLHGEGIRGSQALSIALQGEPDESFLYGPSRHVEHVWTKFPQF
Ga0182100_10979681	3300015280	Switchgrass Phyllosphere	MSFHSYIVVFCAPIPIWDRELPILDPVA*VIAFKLHGEGIRGSQALSITLQ
Ga0182101_10216031	3300015284	Switchgrass Phyllosphere	MSFYSYRIVSVPLFQQDRELPILDVVAVIAFKLHGEGIRGSQAYLSAYRDER
Ga0182101_10920301	3300015284	Switchgrass Phyllosphere	MSFHSYRIVFCAPIPIWDREVLILDPVAVIAIKLHGEGIRGSQALSISLQEVPDESFLYGPSRHVEHVWAK
Ga0182180_10477731	3300015306	Switchgrass Phyllosphere	MSFHCYMVVLCAPFPIWDRELPILEPVAVIAFKLHGEGIRGSQALSITLQGAPDESFLYGPS
Ga0182162_11069321	3300015310	Switchgrass Phyllosphere	MSFHSYRIVFCAPIPIWDREVLILDPVA*VIAIKLHGEGIRGSQALSI
Ga0182162_11199011	3300015310	Switchgrass Phyllosphere	MSFHSYMVVFCAPIAIWDRELPILDPVAVTAFKLHGEGIRGPQALSIALQGAPDESFLYGPSRHVEYVWAKIPQFHRR
Ga0182168_11192241	3300015312	Switchgrass Phyllosphere	MSFHSYRIVFCALIPTEPRIPILDPVARVIAFKLHGEGIQGSQALSIALQG*APDESFLY
Ga0182168_11273571	3300015312	Switchgrass Phyllosphere	MSFHSYRVVFCAPIPILDREVLILDHVAVIAIKLHGEGIRGSQALSIALQG
Ga0182164_11147641	3300015313	Switchgrass Phyllosphere	MSFHNYRVVFYAPMPMGPRTPNLDPVAVIAFKLHGEGIRGSQALSIALQGAPDESF
Ga0182164_11174981	3300015313	Switchgrass Phyllosphere	MSFHSYRVVFCAPIPIDRELPILDHVAVIAFKLHGEGIRGSQALSIALQGAPDESF
Ga0182136_10558571	3300015317	Switchgrass Phyllosphere	MSFHSYRVVFCAPIPIWDRELPILDPVA*VIAFKLHGEGIRGSQA
Ga0182181_11031951	3300015318	Switchgrass Phyllosphere	MSFHSYMIVFCAPIPIWDRELPILDPVAVIAFKLHGEGIWGSQDLSIAPQGAPDESFLYGPSRHVEYV
Ga0182130_10542401	3300015319	Switchgrass Phyllosphere	MSFHSYMLVFCAHIPIWDRELPILDPVAVIAFKLHGEGIRGPQALFIALQGAPDESFLFGPSRHVEYVWAKIPQFH
Ga0182148_10770601	3300015325	Switchgrass Phyllosphere	MSGVLYMSFHSYRVVFCAPIPIDREVLILDPVAVIAIK
Ga0182114_10388661	3300015327	Switchgrass Phyllosphere	MSFHSYMVVLCAPVPIWDRELPSMDPVAVIAFKLHGEGIRGSQALSIALQGAPDEYFLYG
Ga0182114_10932271	3300015327	Switchgrass Phyllosphere	MSFLSYRVVFCAPIPIWDELPILDPVAVIAFKLHGEGIRGSQALSMALQG*APDESFLYGPSRHVEHVWVKIPQFPW
Ga0182114_11532681	3300015327	Switchgrass Phyllosphere	MSFHSYIVVFCAAIPIWCELPILDPVALVIAFKLHEEGIRGSQALSIALQGLPDESFLYGPSR
Ga0182152_11340611	3300015330	Switchgrass Phyllosphere	MSFQSYMVVLCAPILIWDRELPSLDTVAVIAFKLHREGIRGSQALSIALQGALDES
Ga0182131_11095081	3300015331	Switchgrass Phyllosphere	MSFHSYMSVFCAHIPIWDRELPILDPVA*VIAFKLHGE
Ga0182131_11327261	3300015331	Switchgrass Phyllosphere	MSFHSCKVVFCAPIPTGPKTPDLDPVAVVSFKLHGEGIRGSQALSIALQGAPDESFL
Ga0182131_11384261	3300015331	Switchgrass Phyllosphere	MSFHSYRIVFCALIPTEPRIPILDPVA*VIAFKLHGEGIQGSQALSIA
Ga0182117_11224411	3300015332	Switchgrass Phyllosphere	MSFHSYRVVFCAPIPILDREVPILDHVARVIAIKLHGEGIRGSQALSIALQG*APDESFL
Ga0182116_10658591	3300015335	Switchgrass Phyllosphere	MSFQSYRVVLCAPIPIWDRELPILDPVARVIAFKLHG
Ga0182116_11428891	3300015335	Switchgrass Phyllosphere	MSFHSYRVVFCAPIPIWDREVLILDPVAVIAIKLHGEGIRGSQALSIALQGAPD
Ga0182116_11620361	3300015335	Switchgrass Phyllosphere	MSLHSYGVVLCAPIPIWDREVLILDPVAWVIAFKLHGEGIRGSQALSIALQG*
Ga0182137_11698931	3300015338	Switchgrass Phyllosphere	MSFHSYRVVFCAPIPFLYREVLILDPVA*VIAIKLHGEGIR
Ga0182149_11109941	3300015339	Switchgrass Phyllosphere	MSFHSFRGVFCAPIPIWDRELPILDPAACVIAFKLHGE
Ga0182133_11773821	3300015340	Switchgrass Phyllosphere	MSFHSYRVVFCASIPMGPRTPDLDPVSVIAFKLHEKGIRGSQALSIALQGAPDESFLYGP
Ga0182133_11897381	3300015340	Switchgrass Phyllosphere	MSFHSYRVVFCAPIPIWDREVLILDPVVVIAIKLHREGIRGSQALSISLQGAQDESFLYG
Ga0182115_11795641	3300015348	Switchgrass Phyllosphere	MSGLLYTSFHSYRVVFCAPIPIWDREVLILDPVAVIAIKLHGEGIRGSQALSIALQGEPDESFLYGPSRH
Ga0182185_11924811	3300015349	Switchgrass Phyllosphere	MSFHSYMVVFCAAIPRDRELPILDPVACVIPFKLHGEGIWGSQALSIALQG*
Ga0182185_12397221	3300015349	Switchgrass Phyllosphere	MSIHYYRVVFRAPIPTGPRIPILDPIACVIAFKLHGEGIRGSQA
Ga0182185_12589771	3300015349	Switchgrass Phyllosphere	MSFLYYRVVFCAPIPTGPRTPDLDPVAVIAFKLHGKGIRASQALSIALLGAPDESFL
Ga0182169_11386611	3300015352	Switchgrass Phyllosphere	MSSHSYRVVFCAPIPIWDRELQILDSVAVIAIKLHGEGIRGSQALSIALQGAPDDSFLYGPSRHVEHVW
Ga0182169_12128201	3300015352	Switchgrass Phyllosphere	MSFHSYMVVFCAHIPIDRELPILDPVAVIAFKLHGEGIRGPQALSIALQG*APDESFLFGPSRHVEYV
Ga0182169_12158341	3300015352	Switchgrass Phyllosphere	MSFHSYGVVFYAPIPIWDREVLILDPVAVIAIKLHVEGIRGSQALSIALQGAPDESSLYGPSRHVEHVWEKNSSVS*
Ga0182169_12280401	3300015352	Switchgrass Phyllosphere	MSFHSYRVVFYAPIPIWDREVLILDPVVVIAIKLHGEGIRGSQALSISLQGVPDESFLYG
Ga0182169_12517321	3300015352	Switchgrass Phyllosphere	MSFHSYKVVFCAPIPIWEELPILDPVAVIAFKLHGEGIRGSQA
Ga0182169_13090531	3300015352	Switchgrass Phyllosphere	MSFHSYRVVLCAPIPIWDREVLILDPVA*VIAIKLHGEGI
Ga0182169_13118871	3300015352	Switchgrass Phyllosphere	MSFYSYRVVFCVPIQRDELSILDIIARVIDFKLHGEGIRGSQALSIALQGAPNES
Ga0182179_12158021	3300015353	Switchgrass Phyllosphere	KYVRVLYMSFHSYRVVFCAPIPIWDRELPILDPVAVIAFKLHGEGIRGSQSLSIALQGAPDESFLYGPAGHVEHVWAKNSSVS*
Ga0182179_12866341	3300015353	Switchgrass Phyllosphere	MSFHSYKVVFCAPIPIWDRELPILDPVACVIAFKLHGEGIRGSQALSIALQG*APDDSFLYSPS
Ga0182167_12750891	3300015354	Switchgrass Phyllosphere	MSFHSFRGVFCAPIPIWDRELPILDPAACVIAFKLHGEGIRCSQALSIAL
Ga0182199_11206451	3300017412	Switchgrass Phyllosphere	MSFHSYRVVLCAPIPIWDREVLILDPVAXVTAIKLHGEGIRGSQALSIALQGXAPDESFLYGPSRQVEHVWAK
Ga0182199_12072571	3300017412	Switchgrass Phyllosphere	MSFHSYRIVFCAPIPIWDREVLILDPVAXVIAIKQHGEGIRGSQALSISLQGXAPDESF
Ga0182195_11296591	3300017414	Switchgrass Phyllosphere	MSGVLYMSFHSYRVVFCAPIPIWDREVLILDPVAXVIAIKLHGEGIRGSQALSIALQGXAPDESFLYGPYRHVEHVW
Ga0182195_11755271	3300017414	Switchgrass Phyllosphere	MSFHSYMVVFCAPIPIWDRELPILDPVAXVIAFKLHGEGI
Ga0182196_10845631	3300017432	Switchgrass Phyllosphere	MSFHSYRIVFCALIPSEPRIPILDPVAXVIAFKLHGEGIQGSQAL
Ga0182200_11510211	3300017439	Switchgrass Phyllosphere	MSFHSNMVEFCTPFPIWDXELPILEPVAXVIAFKLHGEGIRGSQALSISLQGXAPDDSFLYSP
Ga0182214_10601371	3300017440	Switchgrass Phyllosphere	MSFHSYMVVFCAPIPIWDRELPILDPVAXVIAFKLHGEGIRGSQAL
Ga0182214_11135351	3300017440	Switchgrass Phyllosphere	MVLYISFHSYRVVFCASIPMGPRTPDLDPVSXVIAFKLHEKGIRGSQALSIALQGXAPDESFLYGP
Ga0182214_11163741	3300017440	Switchgrass Phyllosphere	MSFHSYRVVFCAPLPILDRELPILDPVAXVIAFKLHGEGIWGSQALSIALQGXAPDESFLYGPS
Ga0182198_10910981	3300017445	Switchgrass Phyllosphere	MSFHSYMLVFCAHIPIWDRELPILDPVAXVIAFKLHGEGIRGPQALFIALQGXAPDESFLFGPSRHVEYVWAKI
Ga0182198_11384261	3300017445	Switchgrass Phyllosphere	MSFHSYKVVLCAPIPIWDRELPILDHVAXVIAFKLHVEGIRGPQALSITLQGXAPDESFL
Ga0182198_11386031	3300017445	Switchgrass Phyllosphere	MSFHSYGVVFYAPIPIWDREVLILDHVAXVIAIKLHVEGIRGSQALSIALQGXAPDESSLYGPSRHVEHVWEKNSSVS
Ga0182198_11942271	3300017445	Switchgrass Phyllosphere	MSFCSYMVVFCAPIPIWDXEFQILDPVAXVIAFKLHEEGIRGSQALSITLQGXLLDESFLYGPSRHVEHVWAKI
Ga0182215_10718361	3300017447	Switchgrass Phyllosphere	MSFHSYRIVFCAPIPIWDREVLILDPVAXVIAIKLHGEGIRGSQALSIA
Ga0182215_11142941	3300017447	Switchgrass Phyllosphere	MSFYSYRVVFCPPFQRDRELPILEPVAWVIAFKLHGERIRVSQALSIALQGXGPDES
Ga0182215_11319641	3300017447	Switchgrass Phyllosphere	MSFHSYRVVFCAPIPIWEXELPILDPVAXVIAFKLH
Ga0182212_11440391	3300017691	Switchgrass Phyllosphere	MSFHSYRVVFCAPILIWDRELPILDHVAXVIAFKLHGEGIRGSQALSITL
Ga0182212_11562141	3300017691	Switchgrass Phyllosphere	MSFHSYRVVFYAPIPIWDREVLILDPVAXVIAFKLHGEGIRSSQALSIALQGXAPDESFLYGPS
Ga0182210_10919961	3300017692	Switchgrass Phyllosphere	MVVFYAPIPIWDRELPILDPVAXVIAFKLHGEGIRGSQALSIALQGXAPDESFLYGPSRHVEYVWAK
Ga0182210_11201241	3300017692	Switchgrass Phyllosphere	MVLYISFHSYRVVFCASIPMGPRTPDLDPVSXVIAFKLHEKGIRGSQALSIALQGXAPDESFLYGPSR
Ga0182216_10326042	3300017693	Switchgrass Phyllosphere	MSFHSYRVVLCAPIPIWDREVLILDPVAXVTAIKLHGEGIRGSQALSIALQGXAPDESFLYGPS
Ga0182216_10586211	3300017693	Switchgrass Phyllosphere	MSFHSYRVVFCAPIPISDREVLILDPVAXVIAIKLHGEGIRGSQALSIALQGXAPDESFLYG
Ga0182216_10946011	3300017693	Switchgrass Phyllosphere	MRFHSYRVVFCAPIPIWDRELPILDPVAXVIAFKLHGEGIRGSQALS
Ga0182216_11379011	3300017693	Switchgrass Phyllosphere	MSFHSYRVVFCAPLPILDRELPILDPVAXVIAFKLHGEGIRGSQALSIALQG
Ga0182178_10169041	3300020023	Switchgrass Phyllosphere	MSFHSYMVVFCAPIPIWDRELLILDPVAXVIAFKLHREGIRGPQALSIALQGLAPDESFL
Ga0207641_116426322	3300026088	Switchgrass Rhizosphere	MSFHSYMVVLCAPIPIWDRELLILDPVAXVIAFKLHGEGIRGSQALSIALQGXALD
Ga0268322_10178971	3300028049	Phyllosphere	MSGLLYTSFHSYRVVFCAPIPIWDREVLILDPVAXVIAIKLHGEGIRGSQALSIA
Ga0268328_10307651	3300028050	Phyllosphere	MSFHSYRVVFCAPIPIWDRELPILDPVARVIAFKLHGEGIRGSQALSITLQ
Ga0268344_10018751	3300028051	Phyllosphere	MSFHCYMVVLCAPFPIWDRELPILEPVAXVIAFKLHGEGIRGSQALSIALQEXAP
Ga0268344_10048781	3300028051	Phyllosphere	MRFHSYRVVFCAPIPIWDRELPILDPVAXVIAFKLHGEGIRGSQALSITLQGXAPDESFLYGPSRHVEHVWVKIPQF
Ga0268300_10037351	3300028052	Phyllosphere	MSFHSYMVVFCAPIPIWDRELPILDPVAXVIAFKLHEEGIRGSQALSITLQ
Ga0268300_10047431	3300028052	Phyllosphere	MSFHSYMVVLCAPIPIWDRELLILDPVAXVIAFKLHGEGIRGSQ
Ga0268330_10112011	3300028056	Phyllosphere	MSFHSYIVVFCAPIPIWDRELPILDPVAXVIAFKLHGEGIRGSQALSITLQGSAPDESLQYGPSRHVEHVWTKIPQFHQRLVGWV
Ga0268330_10153531	3300028056	Phyllosphere	MSFHSYGVVFYAPIPIWDREVLILDPVAXVIAIKLHVEGIRGSQALSIALQGXAPDESFLYGPPRHVEHVWEKNSSVS
Ga0268330_10379291	3300028056	Phyllosphere	MSFHSYNVVLCAPIPIWDRDVLILDPVAXVTAIKLYGEGIQGSQALSIALQGXALDESFLYGPSRYVEHVWAKNSSV
Ga0268330_10498122	3300028056	Phyllosphere	MSFYSYMVVFYAPIPIWDRELPILDPVAXVIAFKLHGEG
Ga0268330_10506621	3300028056	Phyllosphere	MSFHSYMVVFCALIPIWDRELPILDPVAXVIVFKRHGEGIR
Ga0268330_10529171	3300028056	Phyllosphere	MSFHSYRVVFCAPIPIWDREVLILDPVVXVIAIKLHREGIRGSQALSISLQG
Ga0268330_10570211	3300028056	Phyllosphere	MSFHSYRVVLCAPIPIWDREVLILDPVAXVTAIKLH
Ga0268352_10364031	3300028057	Phyllosphere	MSGVLYTSFHSYRVVFYAPIPIWDREVLILDPVAXVIAFKLHREGIRGSQALSITLQGXV
Ga0268332_10359521	3300028058	Phyllosphere	MSFHSYRVVFCAPIPIWDRELPILDHVARVLAFKLHGEGIRGSHALSITLQGXAPDDSFL
Ga0268332_10604851	3300028058	Phyllosphere	MSFHSYMVVFCAPIPIWDRELLILDPVAXVIAFKLHREGIRGPQALSIALQGLVPDESFL
Ga0268332_10628851	3300028058	Phyllosphere	MSFHSYKVVFCAPIPIWDRELPILDPVAXVIAFKLHEEGIRGSQALSIALQGXAPDESFLYGPSRYVEHDWPKIPQFYRRL
Ga0268314_10435231	3300028061	Phyllosphere	MSFHSYRVVFCAPLPIWDRELPILDPVAXVIAFKLHEEGIRGSQALSIALQ
Ga0268342_10023761	3300028062	Phyllosphere	MSFHCYMVVLCAPFPIWDRELPILEPVAXVIAFKLHGEGIRGSQALSIALQGXAPDESFLYGPSR
Ga0268342_10351821	3300028062	Phyllosphere	MSFHSYMAVFSAPMPTGPSTPNLDPVAXVIAFKLHGEGIRGSQALSIALQGXAPDESF
Ga0268342_10353611	3300028062	Phyllosphere	MRFHSYRVVFCAPIPIWDRELPILDPVAXVIAFKLHGEGIRGSQALSI
Ga0268340_10541792	3300028064	Phyllosphere	MSFHSYMLVFCAHIPIWDRELPILDPVAXVIAFKLHGEGIRGPEALFIALQGXA
Ga0268340_10578641	3300028064	Phyllosphere	MSFHFYKVVFCAPIPIWDRELPILDPVAXVIAFKLHEEGIRGSQALSIALQGXLPDESFLYGPSRHVE
Ga0268334_10021591	3300028140	Phyllosphere	MVVFCAPIPTGPRTPDLDHVAXIIAFNLHEEGFRGSQALSIALQGXAPD
Ga0268334_10165741	3300028140	Phyllosphere	MSFHSYMVVFCAPIPIWDRELPILDPVAXVIAFKLHGEGIRGPQALS
Ga0268347_10156981	3300028142	Phyllosphere	MSFHSYKVVFCAPIQRDRELPIFDAVAXVIDFKLHGEGIRGSQALSIALQGCAPDESFLYGPSR
Ga0268347_10167081	3300028142	Phyllosphere	MSFHSYMLVFCAHIPIWDRELPILDPVAXVIAFKLHGEGIRGPQALFIALQGXAPDESFLFGPSRHVEYVWAK
Ga0268347_10283821	3300028142	Phyllosphere	MSFHSYRVVLCAPIPIWDREVLILDPVAXVTAIKLHGEG
Ga0268348_10234051	3300028143	Phyllosphere	MVVLCAPFPIWDRELPILEPVAXVIAFKLHGEGIRGSQALSIALQGXAPDESFLYGPSRH
Ga0268308_10032812	3300028151	Phyllosphere	MVVLCAPIPIWDRELPILDPVAXVIAFKLHVEGIRGPQALSITLQGXAPDESFLYGPSRHVEYVWAKIPQF
Ga0268308_10267571	3300028151	Phyllosphere	MSFHSNMVVFCAPIPIWDRELPILDPVAXVIAFKLHGEGIRGSQALSITLQGXAP
Ga0268341_10251011	3300028154	Phyllosphere	FYAPIPIWDREVLILDPVAXVIAIKLHVEGIRGSQALSIALQGXAPDESSLYGPSRHVEHVWEKNSSVS
Ga0268341_10263431	3300028154	Phyllosphere	MSFHSYKVVFCAPIPIWDXELPILDPVAXVIGFKLHEEGI
Ga0268341_10311031	3300028154	Phyllosphere	MSFHSYRIVFCALIPTEPRIPILDPVAXVIAFKLHGEGIQGSQALSIALH
Ga0268351_10124101	3300028246	Phyllosphere	MSFHSYRIVFCALIPTEPRIPILDPVAXVIAFKLHGEGIQGSQALSIALQGXAPDESFLYGPSTHVEHVWVKIPQF
Ga0268351_10130561	3300028246	Phyllosphere	MSFHSYMVVFCAPIPIWDRELPILDPVAXVIAFKLHGEGIRGSQALSIALQ
Ga0268324_10114261	3300028251	Phyllosphere	MSFHCYMVVLCAPFPIWDRELPILEPVAXVIAFKLHGEGIRGSQALSIAL
Ga0268316_10084951	3300028253	Phyllosphere	MSFHSYRIVFCALIPTEPRIPILDPVAXVIAFKLHGEGIQGSQALSIALQ
Ga0268310_10204722	3300028262	Phyllosphere	MSFHIYRVVFCAPIPTGPRTPILDLVARVLAFKLHGEGI
Ga0268310_10314802	3300028262	Phyllosphere	MSFHSYRIVFCALIPTEPRIPILDPVAXVIAFKLHGEGIQGSQALSIALQGXAPDE
Ga0268302_1052451	3300028464	Phyllosphere	MVVLCAPFPIWDRELPILEPVAXVIAFKLHGECIRGSQALSIALQ
Ga0268302_1067691	3300028464	Phyllosphere	MSFHSYRIVFCALIPTEPRIPILDPVAXVIAFKLHGEGIQGSQAL
Ga0268301_1034991	3300028465	Phyllosphere	MSFHSYRVVLCAPIPIWDREVLILDPVAXVTAIKLHGEGIRGSQALSIALQGXAPDESFLYGPSRHV
Ga0268321_1060791	3300028466	Phyllosphere	MSFHSYMVVLCAPIPIWDRELPILDPVAXVIAFKLHGEGIRGSQALSIALQGXEPDESFLYGPSRHV
Ga0268321_1114412	3300028466	Phyllosphere	MSFHSYRVVFCALFQRDXELPILDPVARVIAFKLHGEGIRGSQVLSIALQGXAPDESFLYDPS
Ga0268337_10029461	3300028469	Phyllosphere	MSFYSYRVVFCVPIQRDXELSILDIIARVIDFKLHGEGIRGSQALSIALQGXASDESFLFGP
Ga0268323_10140451	3300028471	Phyllosphere	MSFHSYMVVLCAPIPIWDRELLILDPVAXVIAFKLHGEGIRGSQALSIALQGXA
Ga0268323_10207541	3300028471	Phyllosphere	MSFHSYMIVFCAPIPIWDXELPILDPVAXVIAFKLHEEGIRGSQALSIALQGXLPDESFLYGPSRHVEHVW
Ga0268315_10044451	3300028472	Phyllosphere	MSFHSYRVVFCAPIPIWDRELPILDHVARVLAFKLHGEGIRGSQALSITLQGXA
Ga0268315_10056361	3300028472	Phyllosphere	MSFHSYMVVFCAPIPIWDGELPILDPVAXVIAFKLHEEGIRGSQ
Ga0268315_10121011	3300028472	Phyllosphere	MSFHSYKLVFCAPIPIWDRELPILDPVAXVIAFKLYEEGI
Ga0268315_10283151	3300028472	Phyllosphere	MSFHSYRIVFCALIPSEPRIPILDPVAXVIAFKLHGEGIQGSQALSIALQGXAPDESFLY
Ga0268319_10147991	3300028473	Phyllosphere	MSFHSYMVVLCAPIPIWDRELLILDPVAXVIAFKLHGEGIRGSQALSIALQGXAPDESFLYGASKHVEYVWTKISQ
Ga0268319_10163991	3300028473	Phyllosphere	MSFHSYRVVFCAPIPIWDRELPILDPVAXVIAIKLHGEGIRGSQALSI
Ga0268331_10102281	3300028474	Phyllosphere	MVVLCAPIPIWDRELPILDPVAXVIAFKLHVEGIRGPQALSIALQGXAPDESFLYGPSRHVEYIWA
Ga0268329_10192621	3300028476	Phyllosphere	MSFHSYMVVLCAPIPIWDRELPILDPVAXVIAFKLHGEGIRGSQDLSIALQ
Ga0268309_10055071	3300028477	Phyllosphere	MSFDSYKEVFRAPIPTGPRLPILGPVAXVIAFKLHGEGIRGSQALSITLQGXAPDESFLYGPSRHVEHVWAKIPQFHRRLVG
Ga0268313_10138051	3300028523	Phyllosphere	MSFHSYRVVFCAPIPILDREVLILDPVAXVIAIKLHGEGIRGSQALSIALQGXAPDESFLYRPS
Ga0268335_10096501	3300028527	Phyllosphere	MSFHSYMVVFCAPIPIWDRELPILDPVAXVIAFKLHGEGIRGSQALSLALQGXA
Ga0268335_10120531	3300028527	Phyllosphere	MSFHSYRVVLCAPIPTGPRTPDFGSYSMRYTFKLHGEGIRGSQALSIALQGXAPDESFLYGPSRHVEHVWAKI
Ga0268311_10069022	3300028529	Phyllosphere	MSFHSYRIVSVPLFQQDRELPILDAVAXVITFKLHGEGIRSSQA
Ga0268311_10176441	3300028529	Phyllosphere	MSFHSYMVVFCAPIPIWDXELPILDPVAXVIAFKLHGEGIRGSQALSIALQGXAP
Ga0268311_10251471	3300028529	Phyllosphere	MSFHSYMVVLCAPILIWDRELPILDPVAXVIAFKLHREGIRGSQALSIAL
Ga0268311_10252911	3300028529	Phyllosphere	MSFHSYSVVFCTPLPIWDRELPILDPVAXVIAFKLHGEGIRGSQALQG
Ga0268311_10283821	3300028529	Phyllosphere	MSFHSYRVVFYAPIPIWDRELPILDPVAXVIAFKLHGESIRGSQALSIALQGXAQDESFLYG
Ga0268311_10300431	3300028529	Phyllosphere	MVLYISFHSYRVVFCASIPMGPRTPDLDPVSXVIAFKLHEKGIRGSQALSIALQGXAPDESFLYGPSKHVEHVWE
Ga0214493_11291171	3300032465	Switchgrass Phyllosphere	MSFHSYMVVFCAPIPIWDRELPILDPVAXVIAFKLHGEGIRGSQALSI
Ga0214494_11117131	3300032699	Switchgrass Phyllosphere	MSFHSYIVVFCAPIPIWDRELPILDPVAXVIAFKLHGEGIRGS
Ga0314726_1322411	3300032918	Switchgrass Phyllosphere	MSFHSYMIVFCALFQWDRELPILDPVAXVIAFKLHGEGIQGSQALSIVLQGXAPDKSFLYGLSRQV

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040723

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign