Metagenome / Metatranscriptome Family F040746

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040746
Family Type	Metagenome / Metatranscriptome
Number of Sequences	161
Average Sequence Length	83 residues
Representative Sequence	VIEDLRKHTPEQLAELRLLLNAGLLERPDSRRPSFFEIDGAANVYYVLRYPFRHKVLLVAAWHRQSEPVVEFVACT
Number of Associated Samples	83
Number of Associated Scaffolds	161

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	50.62 %
% of genes near scaffold ends (potentially truncated)	30.43 %
% of genes from short scaffolds (< 2000 bps)	73.29 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.311 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.056 % of family members)
Environment Ontology (ENVO)	Unclassified (50.932 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.143 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.23% β-sheet: 20.19% Coil/Unstructured: 60.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 161 Family Scaffolds
PF00166	Cpn10	7.45
PF13426	PAS_9	6.21
PF00930	DPPIV_N	4.97
PF00989	PAS	3.11
PF00118	Cpn60_TCP1	3.11
PF00196	GerE	2.48
PF13545	HTH_Crp_2	2.48
PF11154	DUF2934	2.48
PF00072	Response_reg	1.24
PF00011	HSP20	1.24
PF14300	DUF4375	1.24
PF00990	GGDEF	1.24
PF00300	His_Phos_1	1.24
PF14321	DUF4382	0.62
PF05532	CsbD	0.62
PF13561	adh_short_C2	0.62
PF03795	YCII	0.62
PF01979	Amidohydro_1	0.62
PF01523	PmbA_TldD	0.62
PF00440	TetR_N	0.62
PF01435	Peptidase_M48	0.62
PF00589	Phage_integrase	0.62
PF07589	PEP-CTERM	0.62
PF13751	DDE_Tnp_1_6	0.62
PF00467	KOW	0.62
PF05711	TylF	0.62
PF00881	Nitroreductase	0.62
PF12844	HTH_19	0.62
PF04366	Ysc84	0.62
PF13188	PAS_8	0.62
PF01592	NifU_N	0.62
PF12867	DinB_2	0.62
PF13590	DUF4136	0.62

COG ID	Name	Functional Category	% Frequency in 161 Family Scaffolds
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	7.45
COG0823	Periplasmic component TolB of the Tol biopolymer transport system	Intracellular trafficking, secretion, and vesicular transport [U]	4.97
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	4.97
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	3.11
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	1.24
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	0.62
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.62
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.62
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.62
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.31 %
All Organisms	root	All Organisms	49.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.31 %
cellular organisms	root	All Organisms → cellular organisms	49.07 %
Viruses	superkingdom	All Organisms → Viruses	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.31 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.31 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	20.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.11 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.31 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.35 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.24 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.62 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.35 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.24 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.62 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.35 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.24 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.62 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.62 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.35 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.62 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.62 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.62 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.35 %
unclassified Afipia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia	0.62 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.62 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.62 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.35 %
Afipia sp. GAS231	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. GAS231	0.62 %
unclassified Mycobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium	0.62 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.62 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.35 %
Mycobacterium sp. JS623	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. JS623	0.62 %
Afipia sp. GAS231	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. GAS231	0.62 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.62 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573001\|GZR05M101AGVK3	Not Available	512	Open in IMG/M
3300001471\|JGI12712J15308_10084297	Not Available	805	Open in IMG/M
3300001867\|JGI12627J18819_10028874	All Organisms → cellular organisms → Bacteria	2289	Open in IMG/M
3300002245\|JGIcombinedJ26739_101228765	Not Available	639	Open in IMG/M
3300004082\|Ga0062384_100259380	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300004120\|Ga0058901_1494696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	689	Open in IMG/M
3300004140\|Ga0058894_1477521	Not Available	701	Open in IMG/M
3300004152\|Ga0062386_100076430	All Organisms → cellular organisms → Bacteria	2551	Open in IMG/M
3300004631\|Ga0058899_10084225	All Organisms → cellular organisms → Bacteria → Acidobacteria	4128	Open in IMG/M
3300004631\|Ga0058899_10125389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. JS623	798	Open in IMG/M
3300004631\|Ga0058899_10178535	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300004631\|Ga0058899_12097731	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300004635\|Ga0062388_100613317	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300005434\|Ga0070709_10308201	Not Available	1158	Open in IMG/M
3300005435\|Ga0070714_100743363	Not Available	948	Open in IMG/M
3300005435\|Ga0070714_101134736	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300005436\|Ga0070713_100200350	Not Available	1802	Open in IMG/M
3300005436\|Ga0070713_100426285	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300005467\|Ga0070706_101678128	Not Available	579	Open in IMG/M
3300005536\|Ga0070697_100135094	Not Available	2071	Open in IMG/M
3300005536\|Ga0070697_101564496	Not Available	589	Open in IMG/M
3300005542\|Ga0070732_10126725	Not Available	1514	Open in IMG/M
3300005591\|Ga0070761_10228391	Not Available	1109	Open in IMG/M
3300005602\|Ga0070762_10180116	All Organisms → Viruses → Predicted Viral	1283	Open in IMG/M
3300005602\|Ga0070762_10216143	Not Available	1179	Open in IMG/M
3300005610\|Ga0070763_10389517	Not Available	782	Open in IMG/M
3300005712\|Ga0070764_11057499	Not Available	513	Open in IMG/M
3300005921\|Ga0070766_10009033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5101	Open in IMG/M
3300006028\|Ga0070717_11086118	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300006028\|Ga0070717_11654044	Not Available	580	Open in IMG/M
3300006176\|Ga0070765_100018846	All Organisms → cellular organisms → Bacteria → Acidobacteria	5099	Open in IMG/M
3300006893\|Ga0073928_10014203	All Organisms → cellular organisms → Bacteria	8825	Open in IMG/M
3300011120\|Ga0150983_11775184	Not Available	704	Open in IMG/M
3300011120\|Ga0150983_12299270	Not Available	1066	Open in IMG/M
3300011120\|Ga0150983_12735017	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300011120\|Ga0150983_12895162	Not Available	731	Open in IMG/M
3300011120\|Ga0150983_14340497	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300011120\|Ga0150983_14593369	Not Available	1202	Open in IMG/M
3300012202\|Ga0137363_10044492	All Organisms → cellular organisms → Bacteria → Acidobacteria	3148	Open in IMG/M
3300012205\|Ga0137362_10115500	All Organisms → cellular organisms → Bacteria	2272	Open in IMG/M
3300012923\|Ga0137359_10870525	Not Available	778	Open in IMG/M
3300016422\|Ga0182039_10768016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300020579\|Ga0210407_10000407	All Organisms → cellular organisms → Bacteria	49696	Open in IMG/M
3300020579\|Ga0210407_10173783	All Organisms → cellular organisms → Bacteria → Acidobacteria	1667	Open in IMG/M
3300020579\|Ga0210407_10247289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1389	Open in IMG/M
3300020579\|Ga0210407_11185283	Not Available	575	Open in IMG/M
3300020580\|Ga0210403_10626572	Not Available	867	Open in IMG/M
3300020581\|Ga0210399_10026931	All Organisms → cellular organisms → Bacteria	4579	Open in IMG/M
3300020581\|Ga0210399_10093924	All Organisms → cellular organisms → Bacteria	2447	Open in IMG/M
3300020581\|Ga0210399_10114664	All Organisms → cellular organisms → Bacteria → Acidobacteria	2210	Open in IMG/M
3300020581\|Ga0210399_10433566	Not Available	1095	Open in IMG/M
3300020581\|Ga0210399_10481127	Not Available	1033	Open in IMG/M
3300020583\|Ga0210401_10007795	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10692	Open in IMG/M
3300020583\|Ga0210401_10024692	All Organisms → cellular organisms → Bacteria	5749	Open in IMG/M
3300020583\|Ga0210401_10457792	Not Available	1138	Open in IMG/M
3300021170\|Ga0210400_10316578	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300021171\|Ga0210405_10037481	All Organisms → cellular organisms → Bacteria → Acidobacteria	3865	Open in IMG/M
3300021171\|Ga0210405_10130787	All Organisms → cellular organisms → Bacteria	1985	Open in IMG/M
3300021171\|Ga0210405_10255918	Not Available	1385	Open in IMG/M
3300021171\|Ga0210405_10356989	All Organisms → cellular organisms → Bacteria → Acidobacteria	1153	Open in IMG/M
3300021171\|Ga0210405_10557788	Not Available	894	Open in IMG/M
3300021178\|Ga0210408_10001178	All Organisms → cellular organisms → Bacteria	28267	Open in IMG/M
3300021178\|Ga0210408_10654337	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300021178\|Ga0210408_10702009	Not Available	797	Open in IMG/M
3300021178\|Ga0210408_10724953	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300021181\|Ga0210388_10344851	All Organisms → cellular organisms → Bacteria → Acidobacteria	1309	Open in IMG/M
3300021402\|Ga0210385_10832075	Not Available	708	Open in IMG/M
3300021403\|Ga0210397_10742396	Not Available	756	Open in IMG/M
3300021405\|Ga0210387_10328106	All Organisms → cellular organisms → Bacteria → Acidobacteria	1349	Open in IMG/M
3300021405\|Ga0210387_10837713	All Organisms → cellular organisms → Bacteria → Acidobacteria	811	Open in IMG/M
3300021405\|Ga0210387_11607728	Not Available	553	Open in IMG/M
3300021405\|Ga0210387_11866795	Not Available	505	Open in IMG/M
3300021406\|Ga0210386_10477657	Not Available	1077	Open in IMG/M
3300021407\|Ga0210383_10290211	Not Available	1406	Open in IMG/M
3300021407\|Ga0210383_10340060	Not Available	1293	Open in IMG/M
3300021407\|Ga0210383_10358837	All Organisms → cellular organisms → Bacteria → Acidobacteria	1256	Open in IMG/M
3300021420\|Ga0210394_10001417	All Organisms → cellular organisms → Bacteria	38655	Open in IMG/M
3300021420\|Ga0210394_10013424	All Organisms → cellular organisms → Bacteria	7921	Open in IMG/M
3300021420\|Ga0210394_10537184	Not Available	1028	Open in IMG/M
3300021420\|Ga0210394_10916299	Not Available	762	Open in IMG/M
3300021432\|Ga0210384_10000009	All Organisms → cellular organisms → Bacteria	317800	Open in IMG/M
3300021432\|Ga0210384_10827851	Not Available	824	Open in IMG/M
3300021474\|Ga0210390_10384100	Not Available	1187	Open in IMG/M
3300021474\|Ga0210390_10896794	All Organisms → cellular organisms → Bacteria → Acidobacteria	729	Open in IMG/M
3300021474\|Ga0210390_11223249	Not Available	605	Open in IMG/M
3300021475\|Ga0210392_11429152	Not Available	517	Open in IMG/M
3300021479\|Ga0210410_10055677	All Organisms → cellular organisms → Bacteria	3449	Open in IMG/M
3300021479\|Ga0210410_10149064	All Organisms → cellular organisms → Bacteria → Acidobacteria	2084	Open in IMG/M
3300021479\|Ga0210410_10292016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1463	Open in IMG/M
3300021559\|Ga0210409_10001543	All Organisms → cellular organisms → Bacteria	29722	Open in IMG/M
3300021559\|Ga0210409_10561664	Not Available	1008	Open in IMG/M
3300022557\|Ga0212123_10000114	All Organisms → cellular organisms → Bacteria	271243	Open in IMG/M
3300022557\|Ga0212123_10000614	All Organisms → cellular organisms → Bacteria	112812	Open in IMG/M
3300025898\|Ga0207692_10689412	Not Available	662	Open in IMG/M
3300025915\|Ga0207693_10137972	Not Available	1918	Open in IMG/M
3300025916\|Ga0207663_10922726	All Organisms → cellular organisms → Bacteria → Acidobacteria	699	Open in IMG/M
3300026557\|Ga0179587_10140805	All Organisms → cellular organisms → Bacteria → Acidobacteria	1497	Open in IMG/M
3300026557\|Ga0179587_10167371	Not Available	1378	Open in IMG/M
3300027071\|Ga0209214_1025452	All Organisms → cellular organisms → Bacteria → Proteobacteria	771	Open in IMG/M
3300027109\|Ga0208603_1025079	Not Available	947	Open in IMG/M
3300027545\|Ga0209008_1007879	All Organisms → cellular organisms → Bacteria → Acidobacteria	2528	Open in IMG/M
3300027562\|Ga0209735_1051413	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300027605\|Ga0209329_1006127	All Organisms → cellular organisms → Bacteria	2154	Open in IMG/M
3300027635\|Ga0209625_1001127	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6441	Open in IMG/M
3300027768\|Ga0209772_10239763	Not Available	575	Open in IMG/M
3300027842\|Ga0209580_10026927	All Organisms → cellular organisms → Bacteria	2593	Open in IMG/M
3300027889\|Ga0209380_10328481	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300028023\|Ga0265357_1041077	Not Available	543	Open in IMG/M
3300028047\|Ga0209526_10089389	All Organisms → cellular organisms → Bacteria	2168	Open in IMG/M
3300028906\|Ga0308309_10062448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2742	Open in IMG/M
3300028906\|Ga0308309_10720155	Not Available	867	Open in IMG/M
3300029636\|Ga0222749_10327330	Not Available	798	Open in IMG/M
3300030862\|Ga0265753_1066290	Not Available	673	Open in IMG/M
3300031057\|Ga0170834_102721386	Not Available	1840	Open in IMG/M
3300031057\|Ga0170834_106425881	Not Available	1176	Open in IMG/M
3300031057\|Ga0170834_108906543	All Organisms → cellular organisms → Bacteria → Acidobacteria	671	Open in IMG/M
3300031057\|Ga0170834_109414107	Not Available	2189	Open in IMG/M
3300031057\|Ga0170834_111955791	All Organisms → cellular organisms → Bacteria	2920	Open in IMG/M
3300031122\|Ga0170822_10417390	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300031128\|Ga0170823_16340115	All Organisms → cellular organisms → Bacteria → Acidobacteria	670	Open in IMG/M
3300031231\|Ga0170824_101341008	All Organisms → cellular organisms → Bacteria	3036	Open in IMG/M
3300031231\|Ga0170824_107244666	Not Available	521	Open in IMG/M
3300031231\|Ga0170824_111961678	Not Available	1180	Open in IMG/M
3300031231\|Ga0170824_114837303	All Organisms → cellular organisms → Bacteria → Acidobacteria	1986	Open in IMG/M
3300031231\|Ga0170824_122284271	All Organisms → cellular organisms → Bacteria → Acidobacteria	989	Open in IMG/M
3300031231\|Ga0170824_126628013	Not Available	509	Open in IMG/M
3300031446\|Ga0170820_10014509	Not Available	735	Open in IMG/M
3300031446\|Ga0170820_16638161	Not Available	1001	Open in IMG/M
3300031708\|Ga0310686_112355790	All Organisms → cellular organisms → Bacteria	1702	Open in IMG/M
3300031715\|Ga0307476_10048166	All Organisms → cellular organisms → Bacteria	2897	Open in IMG/M
3300031715\|Ga0307476_10103429	Not Available	2013	Open in IMG/M
3300031718\|Ga0307474_10030782	Not Available	3934	Open in IMG/M
3300031718\|Ga0307474_10410352	Not Available	1055	Open in IMG/M
3300031718\|Ga0307474_11299970	Not Available	574	Open in IMG/M
3300031720\|Ga0307469_10078121	All Organisms → cellular organisms → Bacteria → Acidobacteria	2228	Open in IMG/M
3300031720\|Ga0307469_10371671	Not Available	1209	Open in IMG/M
3300031753\|Ga0307477_10107409	Not Available	1942	Open in IMG/M
3300031754\|Ga0307475_10030003	All Organisms → cellular organisms → Bacteria	3936	Open in IMG/M
3300031754\|Ga0307475_10112221	Not Available	2138	Open in IMG/M
3300031754\|Ga0307475_10363233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1163	Open in IMG/M
3300031754\|Ga0307475_10562157	Not Available	914	Open in IMG/M
3300031754\|Ga0307475_10740466	Not Available	782	Open in IMG/M
3300031754\|Ga0307475_11283999	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300031820\|Ga0307473_10420563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	881	Open in IMG/M
3300031820\|Ga0307473_10485414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. GAS231	831	Open in IMG/M
3300031823\|Ga0307478_10115784	Not Available	2094	Open in IMG/M
3300031823\|Ga0307478_10829054	All Organisms → cellular organisms → Bacteria → Acidobacteria	774	Open in IMG/M
3300031823\|Ga0307478_10988052	Not Available	703	Open in IMG/M
3300031962\|Ga0307479_10077210	Not Available	3223	Open in IMG/M
3300031962\|Ga0307479_10283827	Not Available	1637	Open in IMG/M
3300031962\|Ga0307479_11274854	Not Available	696	Open in IMG/M
3300031962\|Ga0307479_12037361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	522	Open in IMG/M
3300032180\|Ga0307471_100311973	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300032180\|Ga0307471_101374200	Not Available	867	Open in IMG/M
3300032180\|Ga0307471_101915045	Not Available	742	Open in IMG/M
3300032180\|Ga0307471_103503575	Not Available	555	Open in IMG/M
3300032205\|Ga0307472_100322598	Not Available	1253	Open in IMG/M
3300032205\|Ga0307472_100837794	All Organisms → cellular organisms → Bacteria → Acidobacteria	844	Open in IMG/M
3300032205\|Ga0307472_101832147	Not Available	603	Open in IMG/M
3300032205\|Ga0307472_102749309	Not Available	503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.38%
Host-Associated	Host-Associated	0.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.03%
Aquatic	Environmental → Aquatic	4.35%
Plants	Host-Associated → Plants	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.03%
Freshwater	Environmental → Aquatic → Freshwater	2.48%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.08%
Loam	Environmental → Terrestrial → Soil → Loam	27.95%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.48%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.62%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	60.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.07%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.21%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.48%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.06%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	19.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	9.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.21%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.11%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.48%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.24%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.24%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004140	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF224 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028023	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD2_04935460	2189573001	Grass Soil	PSQVIEDLRKHTPEQLAELRLLLNAGLSDRPDSRHLGFFEIDGAANVYYILRYPFGQKVLLVAAWDRQGDPQAEFVVCT
JGI12712J15308_100842972	3300001471	Forest Soil	DRTGKSSRWSHPLTESIKENEQINRPQVIEELRQHKPEQLADLRILLNAGLDRADIRRPGFFEIDGAANVYYVLRYPFRCKVLLVAAWEREGDPKTEFVASTAG*
JGI12627J18819_100288742	3300001867	Forest Soil	MADPQELARVIEDLRKHTPEQLAELRLLLNAGLSQRPDSRRPGFFEIDGAANVYYILQYPSGDKVLLVAAWHRQSEPLVEFVVCPCPSA*
JGIcombinedJ26739_1012287651	3300002245	Forest Soil	SSRRSHPLTESIKENEQINRPQVIEELRQHKPEHLAELRILLDAGLDRADIRRPGFFEIDGAANVYYVLRYPFRCKVLLVAAWEREGDPKTEFVASTTG*
Ga0062384_1002593803	3300004082	Bog Forest Soil	VIEELRQHKPEQLAELRILLNVGLDRADTRRPGFFEIDGAANVYYILRYPFGHKVLLVAAWDREGNPKAEFVVCT*
Ga0058901_14946961	3300004120	Forest Soil	DLCCSGMNSNVIEDLRKHTPQQLAELGHLLHAGLLDRQDSRRPGFFEIDGAANVYYVLRYPFGHKVLLVAAWDR*
Ga0058894_14775212	3300004140	Forest Soil	NDLSCSGMNSDVIEDLRRHTAQQLAELRLLLNAGLLDRPDTRRPGFFEIDGAANVYYVLRYPFGHKMLLVAAWDRQRELVAGLVTCTCPAA*
Ga0062386_1000764302	3300004152	Bog Forest Soil	MMWEMPSNLSCSGMKNNIIEDLRTHTPQQLAELRFLLNAGLLDRPDSGRPNFFEIDGAANVYYILRYPFGRKVLLVAVWDRQREPVAGLVTCTCPAA*
Ga0058899_100842254	3300004631	Forest Soil	MANLQDLPQVEDLRKHTPEQLAELRLLLNAGLDQADTRRPGFFEIDGAANVYYVLRYPFRHEVMLVAV*
Ga0058899_101253891	3300004631	Forest Soil	LTESIKENEQTNLSRVIEDLRAHKAEQLAELRILLNAGLDRADTRRTGFFEIDGAANVYYILRYPFGHKVLLVATWDR*
Ga0058899_101785351	3300004631	Forest Soil	LTELSKGKDQTHLPRVIEDLRHHTLEQLAELRLLLNVGLDRVDTRRPGFFEIDGAANVYYILRYPFRHQVLLVAAWDRKGDPKAEFVACI*
Ga0058899_120977312	3300004631	Forest Soil	MNSNVIEDLRKHTPQQLAELGHLLHAGLLDRQDSRRPGFFEIDGAANVYYVLRYPFGHKVLLVAAWDR*
Ga0062388_1006133173	3300004635	Bog Forest Soil	LTELHEGNDQTNPPRVIEELRQHKPEQLAELRILLNVGLDRADTRRPGFFEIDGAANVYYILRYPFGHKVLLVAAWDREGNPKAEFVVCT*
Ga0070709_103082011	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VEISKELPRVIEDLRKHTPEQLAELRLLLDVGLGRAETAALVSLKSMVQPMSNYVLRYPFRHKVLLVAAWDREDDP
Ga0070714_1007433632	3300005435	Agricultural Soil	MVDLQELPRVIEDLWHHTPEQLAELRLLLNVGLDRADIRRAGFFEIDGAANVHYVLRYPFRDKVLLVAAWDRKGEPRAEFVACT*
Ga0070714_1011347361	3300005435	Agricultural Soil	EDLRKHTPEQLAELRLLLNAGLLERPDSRRPSFFEIDGAANVYYVLRYPFRHKVLLVAAWHRQSEPVVEFVACT*
Ga0070713_1002003502	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VIEELRQHKPEQLAELRILLNAGLDRADTRRPGFFEIDGAANVYYILRYPFRRKVLLVAAWDREGDPKAEFVVCT*
Ga0070713_1004262852	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VIEDPRQHKPEQLAELRLLLNVGLDRADIRRPGFFELDGAANVYYILRYPFGQKVLLVAAWDRQGDPQTEFVVCA*
Ga0070706_1016781281	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LTEIREGNDQTNLPRVIEELRQHKPEQLAELRILLNAGLDRADTRRPGFFEIDGAANVYYILRYPFRRKVLLVAAWDREGDPKAEFVVCT*
Ga0070697_1001350942	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MADLQELPQVIEDLRKHTPEQLAELRLLLNAGLDRADTRRPGFFEIDGAANVYYVLRYPFRRKVLLVAAWDHQSDPVVEFVAYTTA*
Ga0070697_1015644961	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MADPQELARVIEDLRKHTPEQLAELRLLLNAGLSQRPDSRRPGFFEIDGAANVYYILQYPSGHKVLLVAAWHRQSEPLVEFVVCPCPSA*
Ga0070732_101267252	3300005542	Surface Soil	VIEDLRPHKAEQLAELRILLNAGLDRADTRRTGFFEIDGAANVYYILRYPFGHKVVLVAAWDREGEPKTEFVASTTA*
Ga0070761_102283913	3300005591	Soil	MQKLPVVIEDLRKHRPEQLAELLLLMTAGLSDRPDSRHLGFFEIDGMAHVYYVLRYPSGHKVLLVAAWDRQREPASDS*
Ga0070762_101801163	3300005602	Soil	MVDLQELPRVIEDLRHHTPEQLAELRLLLNVGLDRADIGRAGFFEIDGAANVYYVLRYPFRDKVLLVAAWDRK
Ga0070762_102161431	3300005602	Soil	VIEDLRAHKAEQLAELRILLNAGLDRADTRRTGFFEIDGAANVYYILRYPFGHKVLLVATWDR*
Ga0070763_103895173	3300005610	Soil	MANLRALPQVVEDLRKHTPEQLTELRLLLNAGLSDRADYRRLGFFEIDGAAKVYYILRYPFGQKVLLVAAWDRQGAPHAVSAVCI*
Ga0070764_110574991	3300005712	Soil	VIEDLRAHKAEQLAELRILLNAGLDRADTRRTGFFEIDGAANVYYILRYPFGHKVLLVAAWEREGDPK
Ga0070766_100090332	3300005921	Soil	MVDLQELPRVIEDLRHHTPEQLAELRLLLNVGLDRADIGRAGFFEIDGAANVYYVLRYPFRDKVLLVAAWDRKGEPRAEFVACT*
Ga0070717_110861182	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LTTQNEGHNQTDLPPVIEDPRQHKPEQLAELRLLLNVGLDRADIRRPGFFELDGAANVYYILRYPFGQKVLLVAAWDRQGDPQTEFVVCA*
Ga0070717_116540441	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MVDLLQLPGVIEDLRKHTPEQLAELRLLLIAGLSGRPDSRRPSFFEIDGAANVYYVLRYPFRHKVLLVAAWHRQSEPVVEFVVCT*
Ga0070765_1000188467	3300006176	Soil	VIEDLRPHKAEQLAELRILLNAGLDRADTRRTGFFEIDGAANVYYILRYPFGHKVLLVATWDR*
Ga0073928_1001420315	3300006893	Iron-Sulfur Acid Spring	MADPLLRVIEDLRKHTPEQLAELRLLLNAGLSQRPDSRRPVFFEIDGAANVYYILQYPSGHKVLLVAAWHRQSEPLVEFVVCPCPSA*
Ga0150983_117751841	3300011120	Forest Soil	MANLRALPQVVEDLRKHTPEQLAELRLLLNAGLSDRPDPRHLGFFEIDGAAKVYYILRYPFGQKVLLVAAWDRQGAPHAVSAVCI*
Ga0150983_122992701	3300011120	Forest Soil	VIEELRQHKPEQLAELRILLNVGLDRADTRRPGFFEIDGAANVYYILRYPFGHKVLLVAAWDREGDPKAEFVVCT*
Ga0150983_127350172	3300011120	Forest Soil	VIEDLRHHTLEQLAELRLLLNVGLDRVDTRRPGFFEIDGAANVYYILRYPFRHQVLLVAAWDRKGDPKAEFVACI*
Ga0150983_128951622	3300011120	Forest Soil	LTESTKENEQINRPQVIEELRQHKPEQLAELRILLNAGLDRADIRRPGFFEIDGAANVYYVLRYPFRCKVLLVAAWEREGDPKTEFVASTTG*
Ga0150983_143404971	3300011120	Forest Soil	MMSEMSMDLSCSGMKNNVIEDLRKHTPQQLAELRLLLNAGLLDRPDSRRPGFFEIDGAANVYYVLRYPFGHKMLLVAAWDRQRELVAGLVTCTCPAA*
Ga0150983_145933692	3300011120	Forest Soil	MMPAMPTDLCCSGMNSNVIEDLRKHTPQQLAELGHLLHAGLLDRQDSRRPGFFEIDGAANVYYVLRYPFGHKVLLVAAWDR*
Ga0137363_100444921	3300012202	Vadose Zone Soil	MANLQEIEDLRKHTPEQLAELCLLLNAGVDRADTRRPGFFEIDGAANVYYVLRYPFRHKVLLVAAWDRQGDPKAEFVACT*
Ga0137362_101155001	3300012205	Vadose Zone Soil	MVDLQELPRVIEDLRKHTPEQLAELRLLLNAGLSERPDSRRPSFFEIDGAANVYYVLRYPFRHKVLLVAAWVRQGDPKAEFVACT*
Ga0137359_108705252	3300012923	Vadose Zone Soil	LTELTKENEQTNLPRVIEDLRHHTPEQLAELRLLLNVGLDRPDTRRPVFFEIDGAANVYYVLRYPFRHKVLLVAAWDRQGDPKAEFVACT*
Ga0182039_107680162	3300016422	Soil	VIEDLRNHSSEQLAELRLLLNAGFLGRPDLRRPGFYEIDGAFNVYYVFRFPSGHKVLLVAAWQRELDPVAEMVACRDTAA
Ga0210407_1000040725	3300020579	Soil	MKNNLIEDLRKHTPQQLAELHLLLHAGVLDRPDSRRPGFFEIDGVAKVYYIVRYPFGHKVLLVAAWDRQRELKAGLVTCTCPAA
Ga0210407_101737832	3300020579	Soil	VIEELRQHKPEQLAELRILLDPGLDRADIRRLGFFEIDGAANVYYVLRYPFRCKVLLVAAWEREGNPKTEFVASTTG
Ga0210407_102472892	3300020579	Soil	MDLSCSGMKNNVIEDLRKHTPQQLAELRLLLNAGLLDRPDSRRPGFFEIDGAANVYYVLRYPFGHKMLLVAAWDRQRELVAGLVTCTCPAA
Ga0210407_111852831	3300020579	Soil	VGISKELPRVIEDLRKHTPEQLAELRLLLDVGLGRADTRRTGFFEIDGVANVYYVLRYPFRHKVLLVAAWDREDDPKAEFVVCL
Ga0210403_106265722	3300020580	Soil	LTESIKENEQTNPSRVIEDLRPHKAEQLAELRILLNAGLDRADTRRTGFFEIDGAANVYYILRYPFGHKVLLVATWDR
Ga0210399_100269315	3300020581	Soil	LTESTKENEQINLPRVIEELRQHKPEQLAELRILLDPGLDRADIRRLGFFEIDGAANVYYVLRYPFRCKVLLVAAWEREGNPKTEFVASTTG
Ga0210399_100939243	3300020581	Soil	VGISKELPRVIEDLRKHTPEQLAELRLLLDVGLGRADTRRTGFFEIDGAANVYYVLRYPFRHKVLLVAAWDREDDPKAEFVVCL
Ga0210399_101146641	3300020581	Soil	LTESIKENEQTNLSRVIEDLRAHKAEQLAELRILLNAGLDRADTRRTGFFEIDGAANVYYILRYPFGHKVLLVATWDR
Ga0210399_104335661	3300020581	Soil	MVDLLELPGVIEDLRKHTPEQLAELRLLLIAGLSGRPDSRRPSFFEIDGAANVYYVLRYPFRHKVLLVAAWHRQSEPVVEFVVCT
Ga0210399_104811272	3300020581	Soil	MKNNVIEDLRKHTPQQLAELRLLLNAGLLDRPDSRRPGFFEIDGAANVYYVLRYPFGHKMLLVAAWDRQRELVAGLVTCTCPAA
Ga0210401_100077952	3300020583	Soil	VIEELRQHKPEHLAELRILLDAGLDRADIRRPGFFEIDGAANVYYVLRYPFRCKVLLVAAWEREGDPKTEFVASTAG
Ga0210401_100246921	3300020583	Soil	MVDLLELPGVIEDLRKHTPEQLAELRLLLIAGLSGRPDSRRPSFFEIDGAANVYYVLRYPFRHKVLLVAAWHRQSEPVVE
Ga0210401_104577921	3300020583	Soil	VGISKELPRVIEDLRKHTPEQLAELRLLLDVGLGRADIRRTGFFEIDGAANVYYVPRYPFRHKVLLVAAWDREDDPKAEFVVCL
Ga0210400_103165782	3300021170	Soil	VGISRELPRVIEDLRKHMPEQLAELRLLLDVGVGRADTRRTGFFEIDGAANVYYVLRYPFRHKVLLVAAWDREDDPKAEFVVCL
Ga0210405_100374814	3300021171	Soil	KELPRVIEDLRKHTPEQLAELRLLLDVGLGRADIRRTGFFEIDGAANVYYVPRYPFRHKVLLVAAWDREDDPKAEFVVCL
Ga0210405_101307872	3300021171	Soil	MKNNLIEDLRKHTPQQLAELHLLLHAGVLDRPDSRRPGFFEIDGVAKVYYIVRYPFGHKILLVAAWDRQRELKAGLVTCTCPTA
Ga0210405_102559182	3300021171	Soil	VIEELRQHKPEDLAELRILLNAGLDRADIRRPGFFEIDGAANVYYVLRYPFRCKVLFVAAWEREGDPKTEFVASTTG
Ga0210405_103569892	3300021171	Soil	MVDLQELPRVIEDLRHHTPEQLAELRLLLNVGLDRADIGRAGFFEIDGAANVYYVLRYPFRDKVLLVAAWDRKGEPRAEFVACT
Ga0210405_105577881	3300021171	Soil	VGISRELPRVIEDLRKHTPEQLAELRLLLDVGLGRADTRRTGFFEIDGAANVYYVLRYPFRHKVLLVAAWDREDDPKAEFVVCL
Ga0210408_1000117813	3300021178	Soil	MKNNLIEDLRKHTPQQLAELHLLLHAGVLDRPDSRRPGFFEIDGVAKVYYIVRYPFGHKVLLVAAWDRQRELKAGLVTCTCPAG
Ga0210408_106543371	3300021178	Soil	RKHTPEQLAELRLLLDVGLGRADTRRTGFFEIDGAANVYYVLRYPFRHKVLLVAAWDREDDPKAEFVVCL
Ga0210408_107020092	3300021178	Soil	MVDLLELPGVIEDLRKHTPEQLAELRLLLIAGLSGRPDSRRPSLFEIDGAANVYYVLRYPFRHKVLLVAAWHRQSEPVVEFVLPAENAN
Ga0210408_107249531	3300021178	Soil	TPQQLAELRLLLNAGLLDRPDSRRPGFFEIDGAANVYYVLRYPFGHKMLLVAAWDRQRELVAGLVTCTCPAA
Ga0210388_103448512	3300021181	Soil	RQHKPEQLAELRILLDPGLDRADIRRLGFFEIDGAANVYYVLRYPFRCKVLLVAAWEREGNPKTEFVASTTG
Ga0210385_108320751	3300021402	Soil	MVDLQELPRVIEDLRHHTPEQLAELRLLLNVGLDRADIGRAGFFEIDGAANVYYVLRYPFRDKVLLVAAWDRKGEPRAE
Ga0210397_107423961	3300021403	Soil	MVDLQELPRVIEDLRHHTPEQLAELRLLLNVGLDRADIHRAGFFEIDGAANVYYVLRYPFRDKVLLVAAWDRKGDPR
Ga0210387_103281061	3300021405	Soil	ESTKENEQINLPRVIEELRQHKPEQLAELRILLDPGLDRADIRRLGFFEIDGAANVYYVLRYPFRCKVLLVAAWEREGDPKTEFVASTTG
Ga0210387_108377132	3300021405	Soil	RTGKSSRWSHPLTESTKENEQINLPRVIEELRQHKPEQLAELRILLDPGLDRADIRRLGFFEIDGAANVYYVLRYPFRCKVLLVAAWEREGNPKTEFVASTTG
Ga0210387_116077281	3300021405	Soil	MVDLLELPGVIEDLRKHTPEQLAELRLLLIAGLSGRPDTRRPSFFEIDGAANVYYVLRYPFRHKVLLVAAWHRQSEPVVEFVVCT
Ga0210387_118667951	3300021405	Soil	SLTLTESIKENEQTNPSRVIEDLRPHKAEQLAELRILLNAGLDRADTRRTGFFEIDGAANVYYILRYPFGHKVLLVATWDR
Ga0210386_104776571	3300021406	Soil	EDLRKHTPEQLAELRLLLIAGLSGRPDSRRPSLFEIDGAANVYYVLRYPFRHKVLLVAAWHRQSEPVVEFVLPAENAN
Ga0210383_102902111	3300021407	Soil	SIKENEQTNLSRVIEDLRPHKAEQLAELRILLNAGLDRADTRRTGFFEIDGAANVYYILRYPFGHKVLLVATWDR
Ga0210383_103400602	3300021407	Soil	LWEVNKVKMVDLQELPRVIEDLRHHTPEQLAELRLLLNVGLDRADIRRAGFFEIDGAANVYYVLRYPFRDKVLLVAAWDRKGEPRAEFVACT
Ga0210383_103588371	3300021407	Soil	KELPRVIEDLRKHTPEHLAELRLLLDVGLGRAGTRRTGFFEIDGAANVYYVLRYPFRHKVLLVAAWDREDDPKAEFVVCL
Ga0210394_1000141727	3300021420	Soil	VIEDLRPHKAEQLAELRILLNAGLDRADARRTGFFEINGAANVYYILRYPFGHKVVLVAAWDREGEPKTEFVAPTTA
Ga0210394_100134242	3300021420	Soil	VGINKELPQVIEDLRKHTPEQLAELRLLLNVGLGRADVRRTGFFEIDGAANVYYVLRYPFRHKVLLVAAWDRQDDPKTEFVVCL
Ga0210394_105371842	3300021420	Soil	ENEQTNLSRVIEDLRPHKAEQLAELRILLNAGLDRADTRRTGFFEIDGAANVYYILRYPFGHKVLLVATWDR
Ga0210394_109162991	3300021420	Soil	LTELSKKNDQANLAGVIEDLRQHPPDQLAELRLLLNAGLDRADARRRGFFEIDGAANVYYVLRYPFRQKVMLLAVWDRRSDPKAEFVAHGI
Ga0210384_100000099	3300021432	Soil	MTPEMPIDLSSSGMNSDLIEDLRKHTPQQLAELRLLLNAGLSDRPDYRRPGFFEIDGVANVYYVLRFPFGHKILLLAAWDRQRESVAGLVTYPYPEA
Ga0210384_108278512	3300021432	Soil	MVDLQELPRVIEDLRHHTPEQLAELRLLLNVGLDRADIHRAGFFEIDGAANVYYVLRYPFRDKVLLVAAWDRKGDPRAEFVACT
Ga0210390_103841002	3300021474	Soil	VIEDLRPHKAEQLAELRILLNAGLDRADTRRTGFFEIDGAANVYYILRYPFGHKVLLVAAWDR
Ga0210390_108967941	3300021474	Soil	MVDLQELPRVIEDLRHHTPEQLAELRLLLNVGLDRADIGRAGFFEIDGAANVYYVLRYPFRDKVLLVAAWDRKGEPRAEFVAC
Ga0210390_112232492	3300021474	Soil	STKENEQINRLQVIEELRQHKPEQLAELRILLNAGLDRADIRRPGFFEIDGAANVYYVLRYPFRCKVLLVAAWEREGDPKTEFVASTTG
Ga0210392_114291522	3300021475	Soil	WSLTLTESIKENEQTNPSRVIEDLRPHKAEQLAELRILLNAGLDRADTRRTGFFEIDGAANVYYILRYPFGHKVLLVATWDR
Ga0210410_100556772	3300021479	Soil	MTWEIPNDLSCSGMKNNLIEDLRKHTPQQLAELHLLLHAGVLDRPDSRRPGFFEIDGVAKVYYIVRYPFGHKILLVAAWDRQRELKAGLVTCTCPTA
Ga0210410_101490642	3300021479	Soil	MVDLQELPRGIEDLRHHTPEQLAELRLLLNVGLDRADIGRAGFFEIDGAANVYYVLRYPFRDKVLLVAAWDRKGEPRAEFVACT
Ga0210410_102920161	3300021479	Soil	MMSEMSMDLSCSGMKNNVIEDLRKHTPQQLAELRLLLNAGLLDRPDSRRPGFFEIDGAANVYYVLRYPFGHKMLLVAAWDRQRELVAGLVT
Ga0210409_1000154325	3300021559	Soil	MTPEMPIELSSSGMNSDLIEDLRKHTPQQLAELRLLLNAGLSDRPDYRRPGFFEIDGVANVYYVLRFPFGHKILLLAAWDRQRESVAGLVTYPYPEA
Ga0210409_105616642	3300021559	Soil	MVDLQELPRVIEDLRHHTPEQLAELRLLLNVGLDRADIHRAGFFEIDGAANVYYVLRYPFRDKVLLVAAWDRKGEPRAEFVACT
Ga0212123_10000114226	3300022557	Iron-Sulfur Acid Spring	LVNIQKLPRVIEDLRKHTPEQLAELRLLLDADLSDRPDSRRPSLFEIDGAANVFYILRYPSGHKVLLVAAWDL
Ga0212123_1000061494	3300022557	Iron-Sulfur Acid Spring	MADPLLRVIEDLRKHTPEQLAELRLLLNAGLSQRPDSRRPGFFEIDGAANVYYILQYPSGHKVLLVAAWHRQSEPLVEFVVCPCPSA
Ga0207692_106894121	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VIEELRQHKPQQLAELRILLDAGLDRADIRRLGFFEIDGAANVYYILRYPFRRKVLLVAAWDREGDPKAEFVVCT
Ga0207693_101379721	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ALILATCTIAELRPLLRFGLDRVDIRRAGFFEIDGAANVHYVLRYPFRDKVLLVAAWDRKGEPRAEFVACT
Ga0207663_109227262	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	NLPQVIEELRQHKPEQLAELRILLDPGLDRADIRRLGFFEIDGAANVYYVLRCPFRCKVLLVAAWEREGNPKTEFVASTTG
Ga0179587_101408053	3300026557	Vadose Zone Soil	MANLQEIEDLRKHTPEQLAELCLLLNAGLDRADTRRPGFFEIEGAANVYYVLRYPFRHKVLLVAAWDRQGDPKAEFVACITANGISNRGA
Ga0179587_101673711	3300026557	Vadose Zone Soil	VIEDLRHHAPGQLAELRLLLNAGLDRVDTRRPGFFEIDGAANVYYILRYPFRHKVMLVAVWDRQGDPQAEFVVCTLNRSLRKLLLMRDLVA
Ga0209214_10254522	3300027071	Forest Soil	MLLAGLNKRKMADPQELARVIEDLRKHTPEQLAELRLLLNAGLSQRPDSRRHGFFEIDGAANVYYILQYPSGRKVLLLAAWHRQSEPVVEFVVCSCPSA
Ga0208603_10250791	3300027109	Forest Soil	VIEDLRAHKAEQLAELRILLNAGLDRADTRRTGFFEIDGAANVYYILRYPFGHKVLLVATWDR
Ga0209008_10078792	3300027545	Forest Soil	VIEELRQHKPEQLAELRILLNAGLDRADIRRPGFFEIDGAANVYYVLRYPFRCKVLLVAAWEREGDPKTEFVASTAG
Ga0209735_10514132	3300027562	Forest Soil	MTSDVIEDLRKHTPQQLAELRLLLSAGLLNRPDSRRPGFSEIDGAANVYYVLRYPFGHKVLLVAAWDRQREPVAGLVTCTCPAA
Ga0209329_10061273	3300027605	Forest Soil	MTNIQKLPRVIEDLRKHTPEQLAELRLLLDADLSDRPDSRRPSLFEIDGAANVYYVLRYPSSHKVLLVAAWDL
Ga0209625_10011274	3300027635	Forest Soil	MADPQEPLRVIEDLRKHTPEQLAELRLLLNAGLSQRPDSRRHGFFEIDGAANVYYILQYPSGYKVLLLAAWHRQSEPLVEFVVCHCPSA
Ga0209772_102397631	3300027768	Bog Forest Soil	VIEELRQHKPEQLAELRILLNVGLDRADTRRPGFFEIDGAANVYYILRYPFGHKVLLVAAWDREGNPKAEFVVCT
Ga0209580_100269275	3300027842	Surface Soil	VGINKELPQVIEDLRKHTPEQLAELRLLLNVGLGRADARRTGFFEIDGAANVYYVLRYPFRHKVLLVAAWDRQDDPKTEFVVCL
Ga0209380_103284812	3300027889	Soil	MVTDTERIYEGNKQTNLPRVIEDLRHHTPEQLVELRLLLNAGLDRADTRRPGFFEIDGAANIYYVLRYPFRNKFLLVAVWDRQGDPKAEFVACTTA
Ga0265357_10410771	3300028023	Rhizosphere	LTCKELPPVIEDLRKHTPEQLAELRLLLNAGLLERPDSRRPSFFEIDGAANVYYVLRYPLRHKVLLVAAWHRQSEPVVEFVACT
Ga0209526_100893892	3300028047	Forest Soil	VIEELRQHKPEHLAELRILLDAGLDRADIRRPGFFEIDGAANVYYVLRYPFRCKVLLVAAWEREGDPKTEFVASTTG
Ga0308309_100624483	3300028906	Soil	MANLRALPQVVEDLRKHTPEQLTELRLLLNAGLSDRADYRRLGFFEIDGAANVYYILRYPFSHKVLLVAAWDR
Ga0308309_107201551	3300028906	Soil	VGINKGKWLTCKELPPVIEDLRKHTPEQLAELRLLLNAGLLERPDSRRPSFFEIDGAANVYYVLRYPFRHKVLLVAAWHRQSEPVVEFVACT
Ga0222749_103273302	3300029636	Soil	NNVIEDLRKHTPQQLAELRLLLNAGMLDRPDSRRPGFFEIDGAANVYYVLRYPFGHKMLLVAAWDRQRELVAGLVTCTCPAA
Ga0265753_10662902	3300030862	Soil	MVDLLELPGVIEDLRKHTPEQLAELRLLLNAGLLERPDSRRPSFFEIDGAANVYYVLRYPLRHKVLLVAAWHRQSEPVVEFVACT
Ga0170834_1027213862	3300031057	Forest Soil	VIEELRQHKPEQLAELRILLNAGLDRADIRRPGFFEIDGAANVYYVLRYPFRCKVLLVAAWEREGDPKTEFVASTTA
Ga0170834_1064258812	3300031057	Forest Soil	MADLQELPRVIEDLRKHTPKQLVELRLLLNAGLSERPDSRRTGFFELDGAANVYYILRYPFGHKVLLVAAWDRQSDPMAEFVLCTAA
Ga0170834_1089065432	3300031057	Forest Soil	LTGENSRWSPTLKELTKENKHTNLPRVIEDLRHHTREQLVELRLLLNAGLGRADAGRPGFFEIDGAANIYYVLRYPFRNKFLLVAVWDRQDDPKAEFVACTTA
Ga0170834_1094141072	3300031057	Forest Soil	MVDLQELPRVIEDLRKHAPEQLAELRLLLNAGLSERPDSRRPSFFEIDGAANVYYVLRYPFRHKVLLVAAWHRQSEPVVEFVACT
Ga0170834_1119557912	3300031057	Forest Soil	VIEDLRHHTPGQLAELRLLLNAGLDRVDTRRPGFFEIDGAANVYYILRYPFRHKVMLVAVWDRPGDRQAEFVVCTLNRSLRKLLLMRDLVA
Ga0170822_104173902	3300031122	Forest Soil	MADLQELPQVIEDLRKHTPEQLAELRLLLNAGLDRADTRRPGFFEIDGAADVYYVLRYPFRRKVLLVAAWDHQSDPLVEFVACTTA
Ga0170823_163401152	3300031128	Forest Soil	LTGENSRWSPTLKELTKENKHTNLPRVSEDLRHHTREQLVELRLLLNAGLGRADAGRPGFFEIDGAANIYYVLRYPFRNKFLLVAVWDRQDDPKAEFVACTTA
Ga0170824_1013410084	3300031231	Forest Soil	MANLQELPQVIEDLRQHTPEQLAELRLLLNAGLDRADTRRPGFFEIDGAADVYYVLRYPFRRKVLLVAAWDHQSDPLVEFVACTTA
Ga0170824_1072446661	3300031231	Forest Soil	LTELTKENEQTNLPPVIEDLRHHTPGQLAELRLLLNAGLDRVDTRRPGFFEIDGAANVYYILRYPFRHKVMLVAVWDRPGDPQAEFVVCTLNRSLRKLLLMRDLVS
Ga0170824_1119616782	3300031231	Forest Soil	MADLQELPRVIEDLRKHTPKQLVELRLLLNAGLSERPDSRRTGFFELDGAANVYYILRYPFGHKVLLVAAWDRQSDPKAEFVVCT
Ga0170824_1148373032	3300031231	Forest Soil	MRENVQTKPSRVIEDLRPHKPEQLAELRILLNAGLDRADTRRPGFFEIDGAANVYYILRYPFGHKIMLVAVWDRRGDPTVEFVVSATV
Ga0170824_1222842712	3300031231	Forest Soil	DLRRHKPEQLAELSILLNAGLDRADSRRPGFFEIDGAANVYYILRYTFGPKIMLVAVWDRRGDPKVEFVASATV
Ga0170824_1266280131	3300031231	Forest Soil	TNLPRVIEDLRHHTREQLVELRLLLNAGLGRADAGRPGFFEIDGAANIYYVLRYPFRNKFLLVAVWDRQDDPKAEFVACTTA
Ga0170820_100145092	3300031446	Forest Soil	MRENVQTNPSRVIEDLRPHKPEQLAELRILLNAGLDRADTRRPGFFEIDGAANVYYILRYPFGHKIMLVAVWDRRGDPTVEFVVSATV
Ga0170820_166381612	3300031446	Forest Soil	MANLQELPQVIEDLRQHTPEQLAELRLLLNAGLDRADTRRPGFFEIDGAAHVYYVLRYPFRRKVLLVAAWDHQSDPLVEFVACTTA
Ga0310686_1123557903	3300031708	Soil	MANPQDLPQLIEDLRKHTPKQLAELRLLLNAGLSDRPDSRRPGFFELDGAANVYYILRYPFGHKVLLVAAWDR
Ga0307476_100481661	3300031715	Hardwood Forest Soil	EDLRKHTPEQLAELRLLLGAGFTGRPDMRRPGFYELDGAANVYYIFRYPSGHKVLLVAAWQREMDPVAEMVACVGHAA
Ga0307476_101034292	3300031715	Hardwood Forest Soil	VIEDLRKHTPEQLAELRLLLNAGLSQRPDSRRHGFFEIDGAANVYYMLQYPSGRKVLLLAAWHRQSEPLVEFVVCPCPSA
Ga0307474_100307826	3300031718	Hardwood Forest Soil	MADLQGLPQVIEDLRKHTPEQLAELRLLLNAGLNRADPRRPGFFEIDGAANVYYVLRYPFRYKVMLVAVWDRQGDPKAEFVACTTA
Ga0307474_104103521	3300031718	Hardwood Forest Soil	MPISAHKKQQRKILQELPRVIEDLRKHTPEQLAELRLLLNAGLLERPDSRRTGFFEIDGAANVYYVLRYPFRHKVLLVAAWDRQ
Ga0307474_112999702	3300031718	Hardwood Forest Soil	LRKHTPEQLAELRLLLNAGLSQRPDSRRPGFFEIDGAANVYYILQYPSGHKVLLVAAWHRQSEPLVEFVVCPCPSA
Ga0307469_100781213	3300031720	Hardwood Forest Soil	MADPQELLRVIEDLRKHTPEQLAELRLLLNAGLSQRPDSRRPGFFEIDGAANVYYILQYPSGWKVLLLAAWHRQSEPLVEFVVCSCPSA
Ga0307469_103716712	3300031720	Hardwood Forest Soil	VIEDLRKHTPEQLAELRLLLNAGLLERPDSRRPSFFEIDGAANVYYVLRYPFRHKVLLVAAWHRQSEPVVEFVACT
Ga0307477_101074092	3300031753	Hardwood Forest Soil	VIEDLRKHTPEQLAELRLLLNAGLSQRPDSRRHGFFEIDGAANVYYILQYPSGRKVLLLAAWHRQSEPLVEFVVCPCPSA
Ga0307475_100300036	3300031754	Hardwood Forest Soil	MADLQGLPQVIEDLRKHTPEQLAELRLLLNAGLNRADPRRPGFFEIDGAANVYYVLRYPFRHKVMLVAVWDRQGDPKAEFVACTTA
Ga0307475_101122213	3300031754	Hardwood Forest Soil	MADPQELLRVIEDLRKHTPEQLAELRLLLNAGLSQRPDSRRPGFFEIDGAANVYYILQYPSGHKVPLVAAWHRQSEPLVEFVVCPCPSA
Ga0307475_103632333	3300031754	Hardwood Forest Soil	MADPQELLRVIEDLRKHTPEQLAELRLLLNAGLSQRPDSRRPGFFEIDGAANVYYILQYPSGHKVLLVAAWHRQSEPLVEFVVCPCPSA
Ga0307475_105621574	3300031754	Hardwood Forest Soil	TPEQLAELRLLLNAGLSQRPDSRRPGFFEIDGAADVYYILQYPSGHKVLLVAAWHRQSEPLVEFVVCPCPSA
Ga0307475_107404661	3300031754	Hardwood Forest Soil	DFSPLMPISAHKKQQRKILQELPRVIEDLRKHTPEQLAELRLLLNAGLLERPDSRRTGFFEIDGAANVYYVLRYPFRHKVLLVAAWDRQDDPRAEFVVCT
Ga0307475_112839991	3300031754	Hardwood Forest Soil	KHTPEQLAELRLLLGAGFTGRPDMRRPGFYELDGAANVYYIFRYPSGHKVLLVAAWQREMDPVAEMVACVGHAA
Ga0307475_114496902	3300031754	Hardwood Forest Soil	MANLRDLPQVIEDLRKHTPEQLTELRLLLNAGLSDRPDYRRLGFFEIDGAANVYYILRYPFGHKVLL
Ga0307473_104205631	3300031820	Hardwood Forest Soil	RGLTIMADLQELPEVIEDLRKHTPEQLAELRLLLNAGLDRADTRRPGFYEIDGAANVYYVLRYPFRRKILLVAAWDHQSDPVVEFVACTTA
Ga0307473_104854142	3300031820	Hardwood Forest Soil	MMSEMPKDLSCSGMKHNVIEDLRKHTPQQLAELRLLLNAGLLDRPDSRRPGFFEIDGAANVYYVLRYPFGHKMLLVAAWDRQRELVAGLVTCTCPAA
Ga0307478_101157843	3300031823	Hardwood Forest Soil	VIEDLRKHTPEQLAELRLLLNAGLSQRPDSRRHGFFEIDGAANVYYILQYPSGWKVLLLAAWHRQSEPLVEFVVCPCPSA
Ga0307478_108290541	3300031823	Hardwood Forest Soil	DLRKHPPEQLAELRLLLNAGLSQRPDSRRPGFFEIDGAANVYYILQYPSGHKVLLVAAWHRQSEPLVEFVVCPCPSA
Ga0307478_109880522	3300031823	Hardwood Forest Soil	MTPEMPIDLSCSGMNSDLIEDLRKHTPQQLAELRLLLNAGLLDRPDSRRPDFFEIDGEANVYYVLRFPFGRKILLVAAWDRQREAVAGLVTYPYPEA
Ga0307479_100772103	3300031962	Hardwood Forest Soil	MADLQGLPQVIEDLRKHTPEQLAELRLLLNAGLNRADPRRPGFFEIDGAANVYYVLRYPFRHKVMLVAVWDRQGDPKAEFAACTTA
Ga0307479_102838272	3300031962	Hardwood Forest Soil	MANLRDLPQVIEDLRKHTPEQLTELRLLLNAGLSDRPDYRRLGFFEIDGAANVYYILRYPFGHKVLLVAAWDR
Ga0307479_112748541	3300031962	Hardwood Forest Soil	VIEDLRKHTPEQLAELRLLLNAGLSQRPDSRRHGFFEIDGAANVYYMLQYPSGRKVLLLAAWHRQSEPLVEFV
Ga0307479_120373611	3300031962	Hardwood Forest Soil	HTPEQLAELRLLLDAGLSDRPDSRRPSLFEIDGAANVYYVLRYPTGHNVLLVAAWDRQSDPVAEFVACTCPTLSCQNHSRIR
Ga0307471_1003119731	3300032180	Hardwood Forest Soil	IEDLRKHTPQQLAELRLLLNAGLLDRPDSRRPGFFEIDGAANVYYVLRYPFGHKMLLVAAWDRQRELVAGLVTCTCPAD
Ga0307471_1013742003	3300032180	Hardwood Forest Soil	VIEDLRKHTPEQLAELRLLLNAGLLERPDSRRPSFFEIDGAANVYYVLRYPLCHKVLLVAAWHRQSEPVVEFVACT
Ga0307471_1019150452	3300032180	Hardwood Forest Soil	MLETPDNLSYSGMTNDVIEDLRKHTPQQLAELHLLLHAGLEDRPDSRRPGFFEIDGVAKVYYIVRYRFGHKVLLVAAWDRQRELVGSLVTCTCPAA
Ga0307471_1035035752	3300032180	Hardwood Forest Soil	MADLQELPQVIEDLRKHTPEQLAELRLLLNAGLDRADTRRPGFYEIDGAANVYYVLRYPFRRKILLVAAWDHQSDPVVEFVACTTA
Ga0307472_1003225982	3300032205	Hardwood Forest Soil	VIEDLRKHTPEQLAELRLLLNAGLDRADTRRPGFFEIDGAANVYYVLRYPFRRKILLVAAWDHQSDPVVEFVAGTTA
Ga0307472_1008377941	3300032205	Hardwood Forest Soil	RVIEDLRKHTPEQLAELRLLLNAGLSQRPDSRRPGFFEIDGAANVYYILQYPSGDKVLLVAAWHRQSEPLVEFVVCPCPSA
Ga0307472_1018321471	3300032205	Hardwood Forest Soil	VESKTVRASCLWEVDLQELPRVIEDLRKHTPEQLAELRLRLNVGLDRADIRRAGFFEIDVAANVYYVLRYPFRDKVLLVAAWDRKGDPRAEFVAWT
Ga0307472_1027493091	3300032205	Hardwood Forest Soil	MVDLLELPGVIEDLRKHTPAQLAELRLLLIAGLSGRPDSRRPSFFEIDGAANVYYVLRYPFRHKVLLVAAWHRQSEPVVEFVVCT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040746

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences