Metagenome Family F040912

Basic Information
Family ID	F040912
Family Type	Metagenome
Number of Sequences	161
Average Sequence Length	41 residues
Representative Sequence	MFRIVCDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQRNFEP
Number of Associated Samples	10
Number of Associated Scaffolds	161

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	4.35 %
% of genes from short scaffolds (< 2000 bps)	3.73 %
Associated GOLD sequencing projects	6
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Unclassified (97.516 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut (100.000 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal proximal gut (100.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.58% β-sheet: 0.00% Coil/Unstructured: 59.42%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 161 Family Scaffolds
PF01207	Dus	0.62

COG ID	Name	Functional Category	% Frequency in 161 Family Scaffolds
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.62

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.52 %
All Organisms	root	All Organisms	2.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.52 %
cellular organisms	root	All Organisms → cellular organisms	2.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.52 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.52 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.52 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	1.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.52 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	1.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.52 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	1.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.52 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	1.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.52 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	1.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.52 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	1.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.52 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	1.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.52 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.52 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.52 %
Hexapoda	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.52 %
Insecta	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.52 %
Dicondylia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.52 %
Pterygota	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.52 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	0.62 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002175\|JGI20166J26741_10041971	Not Available	2799	Open in IMG/M
3300002175\|JGI20166J26741_11951720	All Organisms → cellular organisms → Eukaryota → Opisthokonta	804	Open in IMG/M
3300002175\|JGI20166J26741_11953307	Not Available	803	Open in IMG/M
3300002185\|JGI20163J26743_11482112	All Organisms → cellular organisms → Eukaryota	2117	Open in IMG/M
3300027891\|Ga0209628_10304614	Not Available	1678	Open in IMG/M
3300027904\|Ga0209737_10333969	Not Available	1579	Open in IMG/M
3300027984\|Ga0209629_10282593	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	1620	Open in IMG/M
3300027984\|Ga0209629_10571719	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	950	Open in IMG/M

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Arthropoda	Host-Associated → Arthropoda	100.00%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Arthropoda → Digestive System	100.00%

Habitat	Taxonomy	Distribution
Gut	Host-Associated → Arthropoda → Digestive System → Gut	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	100.00%

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001544	Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1	Host-Associated	Open in IMG/M
3300002125	Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4	Host-Associated	Open in IMG/M
3300002127	Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3	Host-Associated	Open in IMG/M
3300002175	Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5	Host-Associated	Open in IMG/M
3300002185	Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1	Host-Associated	Open in IMG/M
3300027558	Cubitermes ugandensis crop segment gut microbial communities from Kakamega Forest, Kenya - Cu122C (SPAdes)	Host-Associated	Open in IMG/M
3300027891	Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4 (SPAdes)	Host-Associated	Open in IMG/M
3300027904	Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3 (SPAdes)	Host-Associated	Open in IMG/M
3300027960	Cubitermes ugandensis midgut segment microbial communities from Kakamega Forest, Kenya - Cu122M (SPAdes)	Host-Associated	Open in IMG/M
3300027984	Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5 (SPAdes)	Host-Associated	Open in IMG/M

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20163J15578_100202185	3300001544	Termite Gut	MFRIVCDPSSGNIKLYLTEIRSGSLMFVLCLIGVWQRNFETVVCVYLTTV*
JGI20163J15578_100566531	3300001544	Termite Gut	MFRIVCDPSLGSIKLYLTEIRSGSLMFVVCLIGVWQRNFEPVV
JGI20163J15578_101973931	3300001544	Termite Gut	MFRIVRDPSSGSIKLYLTEIRSGSLMFVVCLIGVW
JGI20163J15578_102042684	3300001544	Termite Gut	MFRIVCDPSSGSIKLYLTEIRIGSLMFVVCLIGVWQRNY
JGI20163J15578_102451471	3300001544	Termite Gut	MFRIVCNLSPGSIKLYLTEIRSGSLMFVVCLIGVWQ
JGI20163J15578_102744761	3300001544	Termite Gut	MFRIVCDPSLGSIKLYLTEIRSGSLMFVVCLIGVWQRNF
JGI20163J15578_103560661	3300001544	Termite Gut	MFRIACDPSSGSIKLYLTEIIRSGSQMFVVCLVGVW
JGI20163J15578_103812222	3300001544	Termite Gut	MFRIICDPSSGSIKLYWTEIRSGSLMFVICLIGVWQRNFLTSG
JGI20163J15578_103937802	3300001544	Termite Gut	MFWITCDPSSGSIKLYLTEIRSGSLMFVVCLVGVWQR
JGI20163J15578_104346543	3300001544	Termite Gut	MFRIACDPSSGSIKLYLTEISSGSLLFVWCLIGVWQRNFEPV
JGI20163J15578_104751101	3300001544	Termite Gut	MFRIVCDPSLGSIKLYLTEIRGGSLMVVVCLIGVWQRNF
JGI20163J15578_106635691	3300001544	Termite Gut	MFRIVRDPSSGSIKLYLTEIRSGSLMFAVCVIGVW
JGI20163J15578_106730272	3300001544	Termite Gut	MFRIVCDPPSGSIKLYLTEIRSGSLMFVVCLIGVW
JGI20163J15578_107203601	3300001544	Termite Gut	MFRIASDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQR
JGI20163J15578_107874811	3300001544	Termite Gut	MFRIVRDPSSGSIKLYLTEIRSGPLMFVVGLIGVWQRNF
JGI20163J15578_107919771	3300001544	Termite Gut	MFRIVCDPSSGSIELYLTEIRGGSPMFDVCLVGVWQRNFEQW
JGI20163J15578_108600351	3300001544	Termite Gut	MFRIAYDPSSGIMELYLIEIRSGSLMFVVCLVGVW
JGI20163J15578_108646901	3300001544	Termite Gut	MFRIACDPSSGSIKLYLTEIRSGSLMFVVCLVGVWQRN
JGI20165J26630_100529241	3300002125	Termite Gut	MFRIVCDPSLGSIKLYLTEIRSGSLMFVVCLIGVW
JGI20165J26630_102172681	3300002125	Termite Gut	MFWIICDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQ
JGI20165J26630_102873552	3300002125	Termite Gut	MFRIVCDSSSGSIKLYLTEIRSGSLMFVVCLVGVWQRNFEPVV
JGI20165J26630_103566341	3300002125	Termite Gut	MFRIVFDPSSGSIKLYLAEIRSCSLMFVLCLVGVWQRNFEPV
JGI20165J26630_104782913	3300002125	Termite Gut	KIKNHSDMFRIVCDPSSGSIKLYLTEIRIGSLMFVVCLIGV*
JGI20165J26630_104792651	3300002125	Termite Gut	MFRIICDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQ
JGI20165J26630_106681612	3300002125	Termite Gut	MFQIVCDPSSGSIKLYLTEIRSGSLMFVVCLIGVLQRNFEPV
JGI20165J26630_107078221	3300002125	Termite Gut	MFRTVCDPSSGSIKLYLTEIRSGSLMFVVCLVGVW
JGI20165J26630_107261361	3300002125	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSGSLVFVVCLICVWQRNFEPVVCVFTVGRA
JGI20164J26629_102022041	3300002127	Termite Gut	MYGIVCDPSSGGIKLYLTEIRSGSLMFVVCLIGVWQRNF*
JGI20164J26629_102219961	3300002127	Termite Gut	MFRIACDPSSGSIKLYLTEIRSGSLMFVVCLVGVWQR
JGI20164J26629_103300122	3300002127	Termite Gut	MFRIVCDPSSGSIELYLIEIRSGSLMFVVCLVGVWQR
JGI20164J26629_104103611	3300002127	Termite Gut	MFRIVCDPSSGSKKLYLTEIRSGSLMFVVCLIGVWQRNFEP
JGI20164J26629_104766672	3300002127	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQRNFEPVVCVYG
JGI20164J26629_105661181	3300002127	Termite Gut	MFRIVCDPSTRSIELYLIEIRSGSLMFVVCLVGVWQRNFE
JGI20164J26629_105775661	3300002127	Termite Gut	MFRIVRDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQ
JGI20166J26741_100185725	3300002175	Termite Gut	MFRIVRDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQRNFE
JGI20166J26741_100419717	3300002175	Termite Gut	MFRIVCDPSSGSIELYLIEIRSGLLMFVVCLVGVWQRNFEL*
JGI20166J26741_107933614	3300002175	Termite Gut	CDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQRNV*
JGI20166J26741_116166481	3300002175	Termite Gut	MFRTVCDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQ
JGI20166J26741_116429621	3300002175	Termite Gut	MFRVVCDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQ*
JGI20166J26741_116552581	3300002175	Termite Gut	MFRIVRDPSSGSIELYLIEIRSGSLMFVVCLVGVWQRN
JGI20166J26741_117963519	3300002175	Termite Gut	MFRIVCDPSSGSVELYLTEITRSGSQMFVVCLIGVWQRNFEL*
JGI20166J26741_118152232	3300002175	Termite Gut	MFRIVCDPSSGSIKLYLTEIRGGSLMFVVCLIGVWQRNFEPVVCVCV
JGI20166J26741_118161503	3300002175	Termite Gut	MFRILCDPSSGSIKLYLTEIRSGSLMFVVCLVGVWQRNF
JGI20166J26741_118553352	3300002175	Termite Gut	MFRIACDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQRN
JGI20166J26741_118561531	3300002175	Termite Gut	MFRIVCDPSSGSIQLYLTEIRSGSLMFVVCLVGVLQRNFEPVVRVYGTTG*
JGI20166J26741_118801581	3300002175	Termite Gut	MFRIVCDPSSGSKKLYLTEIRSGSLMFVVCLIGVWQRNFEPVVCVC
JGI20166J26741_118837811	3300002175	Termite Gut	IVCDPSSGSIKLYLTEIRSGSLMFVVCLIGVWHRNL*
JGI20166J26741_119517201	3300002175	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQRNL
JGI20166J26741_119533071	3300002175	Termite Gut	MFRIVCDPSLGSIKLYLTEIRGGSLMVVVCLIGVWQRNFEPVV
JGI20166J26741_119573182	3300002175	Termite Gut	VCDPSSGSIKLYLTEIRSGSLMFVVCLVGVWQRNFEL*
JGI20166J26741_120893291	3300002175	Termite Gut	MFRMVCDPSSGSIELYLIEIRSGSLMFVVCLVGVWQRNF*
JGI20166J26741_121222621	3300002175	Termite Gut	MFRIVCDPSSGSIELYLIEIRSGSLMFVVCLVGVWQRNFEP
JGI20166J26741_121449272	3300002175	Termite Gut	MFRIVCDPSSGSIELYLTEIRSGSLMFVVCLICVWQRNFEPVVCVYVTTV*ELLS
JGI20166J26741_122625742	3300002175	Termite Gut	MFRIVCDPSSGSIELCLIEIRSGSLMFVVCLVGVWQRNFEPVVCVYGTT
JGI20166J26741_122801741	3300002175	Termite Gut	MFRIICDPSSGSIELYLTEIRIGSLMFVVRLIGVGQRNF*
JGI20163J26743_104132691	3300002185	Termite Gut	MFRIVCDPSSGSIQLYLTEIRSGSMMFVVCLIGVWQRNFEPVVC
JGI20163J26743_104370651	3300002185	Termite Gut	MFRIVCDPSSWSIKLYLIEIRSGSLMFVVCLVGVWQRNFEPVVC
JGI20163J26743_105098751	3300002185	Termite Gut	MFRIVCDPSSGNMKLYLTEIRSDSLMFVGCLIGVWQRNFEPVVCV
JGI20163J26743_105841691	3300002185	Termite Gut	MFRIASDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQRNF
JGI20163J26743_106921901	3300002185	Termite Gut	MLRIVCDPSSGSIKLYLTEIRICSLMFAVYLIGVWQ
JGI20163J26743_107001352	3300002185	Termite Gut	MFRIVCDPSSGSIELYLIEIRSGSLMFVVCLVGVWQRNF
JGI20163J26743_107414891	3300002185	Termite Gut	MFRIVCDPSSGSIKLYLTEIHSGSLMFVVCLTGVWQ
JGI20163J26743_108949262	3300002185	Termite Gut	MFRIVCDPSLGSIKLYLTEIRSGSLMFVVCLIGVWQRNFEPVVC
JGI20163J26743_110429641	3300002185	Termite Gut	MFRIVCDPSSGSIKLYLTESRSGSLMFVVCLIGVWQRNFEPVVCVCV
JGI20163J26743_111088441	3300002185	Termite Gut	MFQIVCDPSSGSIKLYLTEIRSGSLMFVVCLIGVW
JGI20163J26743_111172081	3300002185	Termite Gut	MFRIVCDPSSGSIKLYLTEIRIGSLMFVVCLIGVWQRNFEPVVCVCTA
JGI20163J26743_111329382	3300002185	Termite Gut	MFRIACDPSSGSIKLYLTEISSGSLLFVWCLIGVWQRNFEPVV
JGI20163J26743_111926491	3300002185	Termite Gut	MFRIVCDPSSGSKTLYLTKIRSGSLMFVVCLIGVWQRNLEPVVYV
JGI20163J26743_112169162	3300002185	Termite Gut	MFRIAYDPSSGIMELYLIEIRSGSLMFVVCLVGVWHRNFEPV
JGI20163J26743_112787101	3300002185	Termite Gut	MFQIVCDPSSGSIQLYLTEIRSGSLMFVICLVGVWQHNFEPVV
JGI20163J26743_112806143	3300002185	Termite Gut	MFRIVRDPSSGSIELYLIEIRSGSLMFVVCLVGVWQRNF
JGI20163J26743_112851921	3300002185	Termite Gut	MFRIVSSRSIELYLIEIRSGSLMFVVCLIGVLQSNFEPVVCVCMLRRS
JGI20163J26743_113568413	3300002185	Termite Gut	CDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQRNS*
JGI20163J26743_114821124	3300002185	Termite Gut	MFWIVCDPSSGSIKLYLTEIRSGSLIFVVCLIGVGQRYYT
Ga0209531_100116811	3300027558	Termite Gut	MFRIVCDPSSGNIKLYLTEIRSGSLMFVLCLIGVWQRNFETVVCVYLTTV
Ga0209531_100331272	3300027558	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQRNF
Ga0209531_101597621	3300027558	Termite Gut	MRSSSGIIELYLIEIRSGSLMFVVCLIGVGQRNFEPV
Ga0209531_102165621	3300027558	Termite Gut	MFRIVCDPSSGSIKLYLAEIRGGSPMFVVCLIGVWQRNLEPVLRVRTL
Ga0209531_103113191	3300027558	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSGSLVFVVCLICVWQRNFEPVVCVF
Ga0209531_103168461	3300027558	Termite Gut	MFRIVCDPSSGSIQLYLTEIRSGSMMFVVCLIGVWQRNFEPV
Ga0209531_103429941	3300027558	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSFSLMLFVCLVGVWQHNFEPVVC
Ga0209531_103466892	3300027558	Termite Gut	MFRIVSSRSIELYLIEIRSGSLMFVVCLIGVLQSNFEP
Ga0209628_100353721	3300027891	Termite Gut	MFRMVCDPSSGSTELCLTVITLSGSQIFFVCLVGVWQRNFEPA
Ga0209628_100928991	3300027891	Termite Gut	MFRIVRDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQRNFEPV
Ga0209628_101206181	3300027891	Termite Gut	MFRIVCDPSSGSIKLYLPEIRSGSLMFVVCLIGVWQRNS
Ga0209628_101252971	3300027891	Termite Gut	MFRMVCDPSSGSIELYLIEIRSGSLMFVVCLVGVWQRNF
Ga0209628_101278711	3300027891	Termite Gut	MFRIAYDPSSGIMELYLIEIRSGSLMFVVCLVGVWHRNFEPVVCVCVC
Ga0209628_101405482	3300027891	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQR
Ga0209628_101943842	3300027891	Termite Gut	MFRIVCDPSSGIIKLYLTEIRSGSLMFVVCLIGVWQRNFEPVVC
Ga0209628_102057571	3300027891	Termite Gut	MFRIVRDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQRNFEPVVCLCVC
Ga0209628_102165893	3300027891	Termite Gut	MFRIVCNPSSGSIQLYLTEIRSGSLMFVLCLVGVWQRNFEPVVCVR
Ga0209628_102687521	3300027891	Termite Gut	MFRIVCDPSLGSIKLYLTEIRSGSLMFVVCLIGVWQRNFEPVVCVRARAHARTH
Ga0209628_102977281	3300027891	Termite Gut	MFRIVCDPSSGSIQLYLTEIRSGSLMFVVCLVGVLQRNFEPVVRV
Ga0209628_102983321	3300027891	Termite Gut	MFRIACDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQRNF
Ga0209628_103046142	3300027891	Termite Gut	VFRIVRDPSSESIQLYLTEIRSGSLMFVVCLVGVWQ
Ga0209628_103605602	3300027891	Termite Gut	MFGIVCNPTSGSIKPYLTEIRIGSLMFVVCLIGVWQRNYA
Ga0209628_104090452	3300027891	Termite Gut	MFRIVRDPSSGNIKLYLTEIRSGSLMFVVCLIGVWQRNFEPVMCVCT
Ga0209628_104101901	3300027891	Termite Gut	MFRIVCDPSSGSIELYLTEIRSGSLLFVVCLIGVWQRNFELVVC
Ga0209628_104375971	3300027891	Termite Gut	MFRMVCDPSSGSIELYLTEIRSGSLMFVVCLVGVWQR
Ga0209628_104603941	3300027891	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQRNFEPVVCVCV
Ga0209628_104963181	3300027891	Termite Gut	MFWITCDPSSGSIKLYLTEIRSGSLMFVVCLVGVWQRNFEPV
Ga0209628_105596541	3300027891	Termite Gut	MFRIVRDPSSGSIELYLIEIRSGSLMFVVCLVGVWQRNFEPVVCVYGTG
Ga0209628_105647491	3300027891	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSGSLMFVVCLVGVWQRNFEPV
Ga0209628_106253021	3300027891	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSGSLMFVVCLVGVWQPNFEPAVCV
Ga0209628_108434781	3300027891	Termite Gut	MFRIVCDPSSGSIELYLIEIRSGSLMFVVCLVGVWQRNFEPVVCVYG
Ga0209628_108766211	3300027891	Termite Gut	MFRIVCDPSSGSIKLYLTEIRGGSLMFVVCLIGVWQRNFEPVVCVCVCV
Ga0209628_109001961	3300027891	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSGSLMVVVCLVGVWQSNFEPVVCVYV
Ga0209628_110063641	3300027891	Termite Gut	MFRIVCDPSLGSIKLYLTEIRGGSLMVVVCLIGVWQRNFEPVVCVC
Ga0209628_110063882	3300027891	Termite Gut	MFRIVCDPSSGSIQLYLTEIRSGSLMFVVCLVGVWQ
Ga0209628_110251981	3300027891	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSCSLMFVLCLIGVWQRNFEPVVCVC
Ga0209628_110788331	3300027891	Termite Gut	MFRTVCDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQRKFEPV
Ga0209628_110844601	3300027891	Termite Gut	MFRIVCDSSSGSIKLYLTEIRSGSLTFFVCLISVWQRKFESVVCVC
Ga0209628_113222611	3300027891	Termite Gut	MFRIVCDPSSGSIELCLIEIRSGSLMFVVCLVGVWQRNFEPVVCVYGTTG
Ga0209628_114065451	3300027891	Termite Gut	MFRIVCDPSSGSIKLYLTEIRGGPLMFVVCLIGVWQRNL
Ga0209628_114089581	3300027891	Termite Gut	MCRIVRDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQRN
Ga0209628_115107741	3300027891	Termite Gut	MFRIVCDPSSGKIKLYLTEIRSGSLMFVVCLIGVWQRNFELVVL
Ga0209628_115166101	3300027891	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSGSLMFVVCLVGVWQRNFEPVVC
Ga0209737_100506051	3300027904	Termite Gut	MFRIVSSRSIELYLIEIRSGSLMFVVCLIGVLQSNFEPVVCVCM
Ga0209737_102218381	3300027904	Termite Gut	MFRIICDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQRNFEL
Ga0209737_102542622	3300027904	Termite Gut	MFRIVCDPSSGSIELYLTEIRSGSLMFVVCLICVWQRNFEPVVCVYVTTV
Ga0209737_102774361	3300027904	Termite Gut	MFRIVCDPSSGSIELYLTEIRSGSLMFVVCLIGVW
Ga0209737_102897511	3300027904	Termite Gut	MFRIVFDPSSGSIKLYLTEIIHSGSLMFVVCLIGVWQHVCVCGR
Ga0209737_103339691	3300027904	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSGSLMFVVCLVGVWQRNFE
Ga0209737_104025381	3300027904	Termite Gut	MFRIVCDPSSGSTELYLTEVRSGSLMFVVCLIGVWQRKF
Ga0209737_108283973	3300027904	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQRNFEP
Ga0209737_108775861	3300027904	Termite Gut	MFRIVCDPSSGSIKLYLTEIRIGSLMFVVCLIGVWQRKF
Ga0209737_109046511	3300027904	Termite Gut	MFRIVCDPSSGSIKLYLTESRSGSLMFVVCLIGVWQRNFEPVVCVC
Ga0209737_109759421	3300027904	Termite Gut	MFRIVCDPSSGSIELYLTEIIRSGSLMFVVCLIGF
Ga0209737_110367031	3300027904	Termite Gut	MFRIVCDPSLGSIKLYLTEIRGGSLMVVVCLIGVWQRNFEPVVCV
Ga0209737_110888291	3300027904	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSGSMMFVVCLIGVWQRNFE
Ga0209737_110948851	3300027904	Termite Gut	MLRIVCDPSSGSIKLYLTEIRICSLMFAVYLIGVWQRNF
Ga0209737_112966231	3300027904	Termite Gut	MFRIVCDPSSGSIELYLIEIRSGSLMFVVCLVGVWQRN
Ga0209737_114595411	3300027904	Termite Gut	MFRIVCDPSSGSIELYLTEISSGSLMFVVCLIGVWQ
Ga0209627_10565891	3300027960	Termite Gut	MFRTVCDPSSGSIETYLTEIRSGSLMFVVCLVGVWQRNFEPV
Ga0209627_10967181	3300027960	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSCSLMFVLCLIGVWQRNFEPVVCVCVR
Ga0209629_100098152	3300027984	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSGSLMFVVCLIGIRQRNF
Ga0209629_100224325	3300027984	Termite Gut	MFRIVCDPSSGSIELYLTEIRSGSLMFVVCLIGIWQPIM
Ga0209629_100542183	3300027984	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQRNFEPMACVYCTTV
Ga0209629_100885761	3300027984	Termite Gut	MFRIVSYPSTGSMKLYLTEIRSGLLMCVVCLVGVWQRNFDPVVCLYGT
Ga0209629_101048461	3300027984	Termite Gut	MFRIVCDPSSGSIELYLTEIRSGSLMFVVCLIGFWQHSFEPV
Ga0209629_102195933	3300027984	Termite Gut	MFRIVCDPSSGSIKLYLTEIRGGSLMVVVCLIGVWQRNFEPVV
Ga0209629_102764791	3300027984	Termite Gut	MFRIVCDPSSGSIQLYLTEIRSGSLMFVVCLVGVLQR
Ga0209629_102812691	3300027984	Termite Gut	MFRIVCDPSSGSITLYLTEIRSGSLMFVVCLIGVWQRNFEPVVCVC
Ga0209629_102825931	3300027984	Termite Gut	MFRIVCDPSSGNMKLYLTEIRSDSLMFVGCLIGVWQRNFEPVVCVYVCVCVC
Ga0209629_103119351	3300027984	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQRNFEPVVCV
Ga0209629_103202411	3300027984	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSGSLMFVVCLVGVWQRNFEP
Ga0209629_104596281	3300027984	Termite Gut	MFRIVRDPSSGSIELYLIEIRSGSLMFVVCLVGVWQRNFEP
Ga0209629_104655131	3300027984	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSCSPMFVLCLVGVWQRNFEP
Ga0209629_104658971	3300027984	Termite Gut	MFRIVCDPSSGSIKLYLTEIRIGSLMFAVCLIGVWQRNFLTSGVC
Ga0209629_104892531	3300027984	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQ
Ga0209629_105191791	3300027984	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSGSLMFVLCLIGVWQRNFEPVVCVDGTT
Ga0209629_105333921	3300027984	Termite Gut	MFQIVCDPSSGSIKLYLTEIRSGSLMFVVCLIGVWQRNLRCQTPIK
Ga0209629_105396851	3300027984	Termite Gut	MFRILCDPSSGSIKLYLTEIRSGSLMFVVCLVGVWQRNFEPVLC
Ga0209629_105412581	3300027984	Termite Gut	MFRIVCDSSSGSIKLYLTEIRSGSLMFVVCLVGVWQRNFEP
Ga0209629_105717191	3300027984	Termite Gut	MFRIVCDPSSWSIKLYLIEIRSGSLMFVVCLVGVWQRNFEPVV
Ga0209629_106571781	3300027984	Termite Gut	MFRIVCDPSLGSIKLYLTEIRGGSLMVVVCLIGVWQRNFEPV
Ga0209629_107645151	3300027984	Termite Gut	MFRIVCDPSSGSIKLYLTEIRSGSLMFVVCLIGDWQHNF
Ga0209629_108054871	3300027984	Termite Gut	MFRIVCDPSSGSIELYLTEIRSGSLMFVVCLICVWQRNFEPVVCVYVTTVXELLS
Ga0209629_108099312	3300027984	Termite Gut	MFRIVCDPSSGSIELYLIEIRSGSLMFVVCLVGVWQRNFEPVA
Ga0209629_108253421	3300027984	Termite Gut	MFRFVCDPSSGSINLYLTEIRSGSLMFVVCLICVWQRNFEPVVCVDGTTGR
Ga0209629_109744491	3300027984	Termite Gut	MFRIVCDPSSGSIKLYLTEIRGGSLMFVVCLIGVWQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F040912

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign