NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F040931

Metagenome Family F040931

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F040931
Family Type Metagenome
Number of Sequences 161
Average Sequence Length 75 residues
Representative Sequence MSYVIVRFEEPREVYIDDQAQGSNLAASGKPRALFVGAGVHTFRLGGAADVDPPTQKLDVPERPILDPFRVDFKKC
Number of Associated Samples 120
Number of Associated Scaffolds 161

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 80.12 %
% of genes near scaffold ends (potentially truncated) 22.36 %
% of genes from short scaffolds (< 2000 bps) 76.40 %
Associated GOLD sequencing projects 111
AlphaFold2 3D model prediction Yes
3D model pTM-score0.81

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.379 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(14.907 % of family members)
Environment Ontology (ENVO) Unclassified
(36.646 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.720 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 40.38%    Coil/Unstructured: 59.62%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.81
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
b.3.5.1: Cna protein B-type domaind2pz4a22pz40.69
b.3.5.0: Cna protein B-type domaind3rkpa13rkp0.69
b.3.5.1: Cna protein B-type domaind2pz4a12pz40.68
b.3.5.0: Cna protein B-type domaind3rkpa33rkp0.66
b.3.2.1: Carboxypeptidase regulatory domain-liked1h8la11h8l0.65


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 161 Family Scaffolds
PF01734Patatin 47.83
PF03972MmgE_PrpD 9.94
PF04909Amidohydro_2 3.11
PF08241Methyltransf_11 1.86
PF00072Response_reg 0.62
PF04392ABC_sub_bind 0.62
PF12695Abhydrolase_5 0.62
PF04075F420H2_quin_red 0.62
PF00903Glyoxalase 0.62
PF10129OpgC_C 0.62
PF13620CarboxypepD_reg 0.62
PF08669GCV_T_C 0.62
PF02954HTH_8 0.62
PF00355Rieske 0.62
PF00528BPD_transp_1 0.62
PF07592DDE_Tnp_ISAZ013 0.62
PF13416SBP_bac_8 0.62
PF00296Bac_luciferase 0.62
PF05670NFACT-R_1 0.62
PF14534DUF4440 0.62
PF07582Obsolete Pfam Family 0.62
PF01613Flavin_Reduct 0.62
PF00245Alk_phosphatase 0.62
PF02126PTE 0.62
PF13193AMP-binding_C 0.62
PF02515CoA_transf_3 0.62

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 161 Family Scaffolds
COG1752Predicted acylesterase/phospholipase RssA, containd patatin domainGeneral function prediction only [R] 47.83
COG3621Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotRGeneral function prediction only [R] 47.83
COG4667Predicted phospholipase, patatin/cPLA2 familyLipid transport and metabolism [I] 47.83
COG20792-methylcitrate dehydratase PrpDCarbohydrate transport and metabolism [G] 9.94
COG1293Ribosome quality control (RQC) protein RqcH, Rqc2/NEMF/Tae2 family, contains fibronectin-(FbpA) and RNA- (NFACT) binding domainsTranslation, ribosomal structure and biogenesis [J] 0.62
COG1735Predicted metal-dependent hydrolase, phosphotriesterase familyGeneral function prediction only [R] 0.62
COG1785Alkaline phosphataseInorganic ion transport and metabolism [P] 0.62
COG1804Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferasesLipid transport and metabolism [I] 0.62
COG1853FMN reductase RutF, DIM6/NTAB familyEnergy production and conversion [C] 0.62
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.62
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 0.62


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.38 %
UnclassifiedrootN/A0.62 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459019|G14TP7Y02HQ2QNAll Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium505Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101449539All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium550Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101721049All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium795Open in IMG/M
3300000559|F14TC_100509419All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium606Open in IMG/M
3300001431|F14TB_100067628All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1617Open in IMG/M
3300004157|Ga0062590_100133593All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1659Open in IMG/M
3300004281|Ga0066397_10029222All Organisms → cellular organisms → Bacteria881Open in IMG/M
3300004281|Ga0066397_10083649All Organisms → cellular organisms → Bacteria → Proteobacteria642Open in IMG/M
3300004479|Ga0062595_102062228All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium553Open in IMG/M
3300005166|Ga0066674_10027486All Organisms → cellular organisms → Bacteria2499Open in IMG/M
3300005167|Ga0066672_10540718All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300005171|Ga0066677_10241412All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1023Open in IMG/M
3300005186|Ga0066676_10048469All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2403Open in IMG/M
3300005332|Ga0066388_100026158All Organisms → cellular organisms → Bacteria5322Open in IMG/M
3300005332|Ga0066388_101174271All Organisms → cellular organisms → Bacteria1309Open in IMG/M
3300005332|Ga0066388_101361950All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1229Open in IMG/M
3300005332|Ga0066388_102957722All Organisms → cellular organisms → Bacteria868Open in IMG/M
3300005332|Ga0066388_108307263All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300005333|Ga0070677_10054233All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1632Open in IMG/M
3300005347|Ga0070668_100087464All Organisms → cellular organisms → Bacteria → Proteobacteria2452Open in IMG/M
3300005353|Ga0070669_100072620All Organisms → cellular organisms → Bacteria → Proteobacteria2548Open in IMG/M
3300005355|Ga0070671_101379489All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium622Open in IMG/M
3300005440|Ga0070705_100054708All Organisms → cellular organisms → Bacteria2342Open in IMG/M
3300005440|Ga0070705_100545472All Organisms → cellular organisms → Bacteria888Open in IMG/M
3300005445|Ga0070708_101006267All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium782Open in IMG/M
3300005445|Ga0070708_101063879All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300005468|Ga0070707_101868858All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300005518|Ga0070699_100045080All Organisms → cellular organisms → Bacteria3816Open in IMG/M
3300005546|Ga0070696_101556928All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium567Open in IMG/M
3300005556|Ga0066707_10524347All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300005558|Ga0066698_10230072All Organisms → cellular organisms → Bacteria1275Open in IMG/M
3300005577|Ga0068857_100988016All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium810Open in IMG/M
3300005713|Ga0066905_100568712All Organisms → cellular organisms → Bacteria954Open in IMG/M
3300005764|Ga0066903_100022789All Organisms → cellular organisms → Bacteria6764Open in IMG/M
3300005764|Ga0066903_100137786All Organisms → cellular organisms → Bacteria3458Open in IMG/M
3300006049|Ga0075417_10046000All Organisms → cellular organisms → Bacteria → Proteobacteria1868Open in IMG/M
3300006058|Ga0075432_10036436All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1710Open in IMG/M
3300006791|Ga0066653_10583694All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium567Open in IMG/M
3300006844|Ga0075428_100816546Not Available991Open in IMG/M
3300006845|Ga0075421_100013584All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria10155Open in IMG/M
3300006845|Ga0075421_100118638All Organisms → cellular organisms → Bacteria → Proteobacteria3321Open in IMG/M
3300006845|Ga0075421_101853612All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium647Open in IMG/M
3300006852|Ga0075433_10810087All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium818Open in IMG/M
3300006914|Ga0075436_100166761All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1554Open in IMG/M
3300009038|Ga0099829_10007012All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales7004Open in IMG/M
3300009038|Ga0099829_10940355All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium717Open in IMG/M
3300009038|Ga0099829_11044551All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300009053|Ga0105095_10277416All Organisms → cellular organisms → Bacteria921Open in IMG/M
3300009088|Ga0099830_10032920All Organisms → cellular organisms → Bacteria → Proteobacteria3521Open in IMG/M
3300009089|Ga0099828_10374482All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1283Open in IMG/M
3300009089|Ga0099828_10593856All Organisms → cellular organisms → Bacteria997Open in IMG/M
3300009137|Ga0066709_100889770All Organisms → cellular organisms → Bacteria1297Open in IMG/M
3300009147|Ga0114129_10383942All Organisms → cellular organisms → Bacteria → Proteobacteria1854Open in IMG/M
3300009147|Ga0114129_10656910All Organisms → cellular organisms → Bacteria1353Open in IMG/M
3300009148|Ga0105243_10072669All Organisms → cellular organisms → Bacteria2785Open in IMG/M
3300009148|Ga0105243_12420312All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium564Open in IMG/M
3300009156|Ga0111538_10392427All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1758Open in IMG/M
3300009162|Ga0075423_12732559All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium540Open in IMG/M
3300009162|Ga0075423_12913595All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria524Open in IMG/M
3300009553|Ga0105249_10113160All Organisms → cellular organisms → Bacteria → Proteobacteria2567Open in IMG/M
3300009553|Ga0105249_10358924All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1478Open in IMG/M
3300010043|Ga0126380_10570707All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium884Open in IMG/M
3300010046|Ga0126384_10809110All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium840Open in IMG/M
3300010047|Ga0126382_10010348All Organisms → cellular organisms → Bacteria → Proteobacteria4448Open in IMG/M
3300010325|Ga0134064_10247740All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria658Open in IMG/M
3300010333|Ga0134080_10166101All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium942Open in IMG/M
3300010359|Ga0126376_10503234All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1122Open in IMG/M
3300010362|Ga0126377_10194169All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1941Open in IMG/M
3300010362|Ga0126377_13597722All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium501Open in IMG/M
3300010398|Ga0126383_10143061All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2218Open in IMG/M
3300010398|Ga0126383_12128878All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300010401|Ga0134121_11463759All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium696Open in IMG/M
3300011269|Ga0137392_10573443All Organisms → cellular organisms → Bacteria937Open in IMG/M
3300011269|Ga0137392_10737173All Organisms → cellular organisms → Bacteria815Open in IMG/M
3300011271|Ga0137393_10090357All Organisms → cellular organisms → Bacteria2481Open in IMG/M
3300011271|Ga0137393_10517838All Organisms → cellular organisms → Bacteria1023Open in IMG/M
3300012096|Ga0137389_11818399All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium505Open in IMG/M
3300012350|Ga0137372_10699678All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium734Open in IMG/M
3300012685|Ga0137397_10034948All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3589Open in IMG/M
3300012918|Ga0137396_10330521All Organisms → cellular organisms → Bacteria → Proteobacteria1128Open in IMG/M
3300012922|Ga0137394_10183508All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1785Open in IMG/M
3300012922|Ga0137394_10857293All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria759Open in IMG/M
3300012925|Ga0137419_11252190All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium622Open in IMG/M
3300012929|Ga0137404_10027572All Organisms → cellular organisms → Bacteria → Proteobacteria4172Open in IMG/M
3300012971|Ga0126369_13385453All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium522Open in IMG/M
3300013100|Ga0157373_10483012All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300013308|Ga0157375_10043798All Organisms → cellular organisms → Bacteria → Proteobacteria4343Open in IMG/M
3300014157|Ga0134078_10205712All Organisms → cellular organisms → Bacteria805Open in IMG/M
3300014326|Ga0157380_11106320All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300014885|Ga0180063_1012513All Organisms → cellular organisms → Bacteria2271Open in IMG/M
3300014885|Ga0180063_1253211All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium563Open in IMG/M
3300015054|Ga0137420_1321941All Organisms → cellular organisms → Bacteria1871Open in IMG/M
3300015241|Ga0137418_10940890All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium631Open in IMG/M
3300015371|Ga0132258_10003382All Organisms → cellular organisms → Bacteria → Proteobacteria30322Open in IMG/M
3300015371|Ga0132258_13653964All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1051Open in IMG/M
3300017659|Ga0134083_10030667All Organisms → cellular organisms → Bacteria1958Open in IMG/M
3300017792|Ga0163161_11712329All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium557Open in IMG/M
3300017997|Ga0184610_1010226All Organisms → cellular organisms → Bacteria → Proteobacteria2342Open in IMG/M
3300018028|Ga0184608_10530574All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium502Open in IMG/M
3300018052|Ga0184638_1005193All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4208Open in IMG/M
3300018053|Ga0184626_10155629All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium972Open in IMG/M
3300018063|Ga0184637_10021076All Organisms → cellular organisms → Bacteria3925Open in IMG/M
3300018063|Ga0184637_10129877All Organisms → cellular organisms → Bacteria → Proteobacteria1554Open in IMG/M
3300018068|Ga0184636_1218899All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300018074|Ga0184640_10139114All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1077Open in IMG/M
3300018076|Ga0184609_10483163All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium566Open in IMG/M
3300018431|Ga0066655_10071924All Organisms → cellular organisms → Bacteria1856Open in IMG/M
3300018466|Ga0190268_10912397All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium685Open in IMG/M
3300018468|Ga0066662_10048856All Organisms → cellular organisms → Bacteria2681Open in IMG/M
3300019886|Ga0193727_1070966All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1076Open in IMG/M
3300020003|Ga0193739_1014282All Organisms → cellular organisms → Bacteria → Proteobacteria2075Open in IMG/M
3300020170|Ga0179594_10006230All Organisms → cellular organisms → Bacteria → Proteobacteria3102Open in IMG/M
3300022534|Ga0224452_1017039All Organisms → cellular organisms → Bacteria → Proteobacteria1983Open in IMG/M
3300022694|Ga0222623_10009203All Organisms → cellular organisms → Bacteria → Proteobacteria3569Open in IMG/M
3300025911|Ga0207654_10035152All Organisms → cellular organisms → Bacteria → Proteobacteria2790Open in IMG/M
3300025923|Ga0207681_10096531All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2122Open in IMG/M
3300025925|Ga0207650_11128027All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium667Open in IMG/M
3300025961|Ga0207712_10315874All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1287Open in IMG/M
3300026089|Ga0207648_10917696All Organisms → cellular organisms → Bacteria818Open in IMG/M
3300026116|Ga0207674_11019395All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300026329|Ga0209375_1149174All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium987Open in IMG/M
3300026331|Ga0209267_1069713All Organisms → cellular organisms → Bacteria1539Open in IMG/M
3300026351|Ga0257170_1054870All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria556Open in IMG/M
3300026507|Ga0257165_1042055All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium814Open in IMG/M
3300026532|Ga0209160_1105656All Organisms → cellular organisms → Bacteria1416Open in IMG/M
3300027846|Ga0209180_10039375All Organisms → cellular organisms → Bacteria2577Open in IMG/M
3300027873|Ga0209814_10120004All Organisms → cellular organisms → Bacteria1121Open in IMG/M
3300027875|Ga0209283_10284509All Organisms → cellular organisms → Bacteria1093Open in IMG/M
3300027909|Ga0209382_10140154All Organisms → cellular organisms → Bacteria2809Open in IMG/M
3300027909|Ga0209382_10227475All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2126Open in IMG/M
3300027909|Ga0209382_11531670All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium663Open in IMG/M
3300027909|Ga0209382_12034182All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium550Open in IMG/M
3300028381|Ga0268264_10320041All Organisms → cellular organisms → Bacteria1466Open in IMG/M
3300028536|Ga0137415_10311926All Organisms → cellular organisms → Bacteria → Proteobacteria1377Open in IMG/M
3300028803|Ga0307281_10006556All Organisms → cellular organisms → Bacteria3188Open in IMG/M
3300031170|Ga0307498_10026357All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1387Open in IMG/M
(restricted) 3300031197|Ga0255310_10110924All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300031226|Ga0307497_10133039All Organisms → cellular organisms → Bacteria1012Open in IMG/M
3300031226|Ga0307497_10418151All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium644Open in IMG/M
3300031720|Ga0307469_10027512All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium3232Open in IMG/M
3300031720|Ga0307469_10401000All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1171Open in IMG/M
3300031720|Ga0307469_12326442All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium523Open in IMG/M
3300031740|Ga0307468_100030567All Organisms → cellular organisms → Bacteria → Proteobacteria2560Open in IMG/M
3300031740|Ga0307468_102032314All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria551Open in IMG/M
3300031740|Ga0307468_102572709All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300031820|Ga0307473_10136910All Organisms → cellular organisms → Bacteria → Proteobacteria1371Open in IMG/M
3300031820|Ga0307473_10574522All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria774Open in IMG/M
3300031908|Ga0310900_10767769All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria777Open in IMG/M
3300032003|Ga0310897_10424096All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium633Open in IMG/M
3300032163|Ga0315281_11444184All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium676Open in IMG/M
3300032174|Ga0307470_10078844All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1810Open in IMG/M
3300032174|Ga0307470_11225654All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium611Open in IMG/M
3300032174|Ga0307470_11781318All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium521Open in IMG/M
3300032180|Ga0307471_100276485All Organisms → cellular organisms → Bacteria → Proteobacteria1751Open in IMG/M
3300032180|Ga0307471_101615061All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium804Open in IMG/M
3300032180|Ga0307471_102155133All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium701Open in IMG/M
3300032180|Ga0307471_102593861All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium642Open in IMG/M
3300032782|Ga0335082_11000256All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300033004|Ga0335084_10311573All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1626Open in IMG/M
3300033004|Ga0335084_11255410All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium739Open in IMG/M
3300034417|Ga0364941_144639All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium596Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil14.91%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere11.18%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil9.32%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil6.21%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.59%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.35%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.35%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.11%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.48%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.86%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.86%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.86%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.24%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.24%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.24%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.24%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.24%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.62%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.62%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.62%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.62%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.62%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.62%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.62%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.62%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.62%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.62%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.62%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.62%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.62%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.62%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459019Litter degradation MG4EngineeredOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004281Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBioEnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014885Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10DEnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018068Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300020003Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026351Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-BEnvironmentalOpen in IMG/M
3300026507Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-BEnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300034417Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
4MG_037107302170459019Switchgrass, Maize And Mischanthus LitterMSYVVVMFPDPREVYIDDEGQGSNIAASGKPRALFVNAGKHTFRLSSAAADVRPPEQTVDVPERPILNPFPVEFKKC
INPhiseqgaiiFebDRAFT_10144953923300000364SoilMSYVVVRFPEHREVYIDDEAQGSNTAASGKPRALFVNAGKHTFRLSGPDVDPPEQTVNVPERPILNPYPVDFRKC*
INPhiseqgaiiFebDRAFT_10172104923300000364SoilMSFVVVLFPEPRDVYIDDQLQGSTRAASGRPRALYVNAGSHVFRLGGRADVEPPTQTLDVPERPILNPFRVDFRXI*
F14TC_10050941923300000559SoilMSFAIVLFPDPRDVYIDDQLQGSSKAASGRPRALYVNAGSHVFRLGGRADVEPPTQTLDVPERPILNPFRVDFRRI*
F14TB_10006762823300001431SoilMSFVVVLFPEPRDVYIDDQLQGSNRAASGRPRALYVNEGSHVFRLGGRADVEPPTQTLDVPERPILNPFRVDFRRI*
Ga0062590_10013359333300004157SoilMSYVVVRYPEPRDVYIDDEGQGSNTAASGKPRALFVNAGKHTFRLSGAGVDPPEQTVNVPERPILNPYPVEFRKC*
Ga0066397_1002922213300004281Tropical Forest SoilMSYVVVRYPEPRDVFIDDEGQGSNIAASGKLRTLFCNAGKHTFRLSGIGVEPPEQTVTVPERPILNPYTIEFRKC*
Ga0066397_1008364923300004281Tropical Forest SoilMSFVVVLFTEPRDVYIDDQLQGSTRAASGRPRALYVNAGSHVFRLGGRADVEPPTQTLDVPERPILNPFRVGFRKI*
Ga0062595_10206222823300004479SoilMSYVVVLFPEPREVYIDDQGQGGTTAASGRPRALFVNAGRHTFRLSGPGVHPAEQTVEVPECPILRPFAVEFKKC*
Ga0066674_1002748623300005166SoilMSYVIVRFVEPREVYIDDQAQGSNLAASGKPRALFVGAGVHTFRLGGAADVDPPTQKLDVPERPILDPFCVAFHKC*
Ga0066672_1054071823300005167SoilMSYVIVRFVEPREVYIDDQAQGSNLAASGKPRALFVGAGVHTFRLGGAADVDPPTQKLDVPERPILDPFSVAFHKC*
Ga0066677_1024141223300005171SoilSYVIVRFVEPREVYIDDQAQGSNLAASGKPRALFVGAGVHTFRLGGAADVDPPTQKLDVPERPILDPFSVAFHKC*
Ga0066676_1004846933300005186SoilMSFVIVLFPEPRDVFIDDRPQGSSKAASGRPRALYVNAGSHVFRLGGRGDVQPPTQTLDVPERPILNPFRVEFRKC*
Ga0066388_10002615823300005332Tropical Forest SoilMSFVVVLFPELRDVYIDDQLQGSTRAASGRPRALYVNAGSHVFRLGGRGDVEPPTQTLDVPERPILNPFRVEFRKI*
Ga0066388_10117427123300005332Tropical Forest SoilMSYVIVLFPEPRDLYIDDEWEGSTSSASGRPRVHFVGAGKHTFRLGGAADVSPTEQRVDVPERPILDPFCVEFKQC*
Ga0066388_10136195023300005332Tropical Forest SoilMSYVVVRYPEPRDVYIDDASQGSNTAASGKPRALFCSAGKHTFRLSGAGVDPAEQTITIPERPILNPYPVEFRKC*
Ga0066388_10295772213300005332Tropical Forest SoilMSFVVVLFPEPRDVYIDDQMQGSTRAASGRPRALYVNAGSHVFRLGGRADVEPPTQTLDVPERPILNPFRVDFRRI*
Ga0066388_10830726313300005332Tropical Forest SoilMSYVVVRYPEPRDVFIDDESQGSTTAASGKPRALFCNAGKHTFRLSGTCVDPAEQTITIPERPILNPYPVEFRKC*
Ga0070677_1005423313300005333Miscanthus RhizospherePMSYVVVRYPEPRDVYIDDEGQGSNTAASGKPRALFVNAGKHTFRLSGAGVDPPEQTVNVPERPILNPYPVEFRKC*
Ga0070668_10008746413300005347Switchgrass RhizosphereVVVRFPEPREVYIDDESQGSSTAASGKPRALFVNAGKHTFRLSGASVDPPEQTLNVPERPILNPYPVEFRKC*
Ga0070669_10007262043300005353Switchgrass RhizosphereMSYVVVRFPEPREVYIDDESQGSSTAASGKPRALFVNAGQHTFRLSGASVDPPEQTLNVPERPILNPYPVEFRKC*
Ga0070671_10137948923300005355Switchgrass RhizosphereMSYVVVRFPEPREVYIDDESQGSSTAASGKPRALFVNAGKHTFRLSGASVDPPEQTLNVPERPILNPYPVEFRKC*
Ga0070705_10005470823300005440Corn, Switchgrass And Miscanthus RhizosphereMSYVVVMFPDPREVYIDDEGQGSNIAASGKPRALFVNAGKHTFRLSSAAADVRPPEQTVDVPERPILNPFPVEFKKC*
Ga0070705_10054547223300005440Corn, Switchgrass And Miscanthus RhizosphereLSYVIVRFPEVREVYIDDQSQGSNTAASGRPRTLFVGAGKHTFRLGSSSNDVDPPSQQVDVPECPILDPFCVEFKKKC*
Ga0070708_10100626723300005445Corn, Switchgrass And Miscanthus RhizosphereMSYVIVRFVEPREVYIDDQGQGSNIAASGRPRALFVGAGVHTFRLGGPPDVDPPTQRLDVPERPILNPFPVDFRKC*
Ga0070708_10106387913300005445Corn, Switchgrass And Miscanthus RhizosphereMSYVIVRFEEPREVYIDDQAQGSNLAASGKPRALFVGAGVHTFRLGGAANVDPPTQDLNVPERPILDPFCVDFKKC*
Ga0070707_10186885823300005468Corn, Switchgrass And Miscanthus RhizosphereMSYVKVLFPESRDVYIDDEWQGSNRAASGRPRALYVNAGQHTFRLGGAADVDPDKQVIDVPERPILDPFPVEFKKC*
Ga0070699_10004508043300005518Corn, Switchgrass And Miscanthus RhizosphereSYVIVRFVEPREVYIDDQGQGSNIAASGRPRALFVGAGVHTFRLGGPPDVDPPTQRLDVPERPILNPFPVDFRKC*
Ga0070696_10155692823300005546Corn, Switchgrass And Miscanthus RhizosphereMSYVVVKFPEARQVYIDDELQGSNIAASGRLRALFVNAGQHTFRLSRADDVDPAEQTLDVPDRPILNPFPVVFRKG*
Ga0066707_1052434723300005556SoilMSYVTVKFPEPREVFIDDQPQGSNRAASGRLRTLFVNAGVHTFRLSANDSEPTSQKVDVPECPILDPFVVAFKKC*
Ga0066698_1023007233300005558SoilMSYVIVRFVEPREVYIDDQAQGSNLAASGKPRALFVGAGVHTFRLGGAADVDPPTQKLDVPERPILDPF
Ga0068857_10098801623300005577Corn RhizosphereLSYVIVRFPEVREVYIDDQSQGSNTAASGRPRTLFVGAGKHTFRLSGSANDVDPPSQQVDVPECPILDPFCVEFKKKC*
Ga0066905_10056871223300005713Tropical Forest SoilMSFVVVLFPEPRDVYIDDQLQGSNKAASGRPRALYVNAGSHVFRLGGRADFVPPTQTLDVPERPILNPFRVEFRRV*
Ga0066903_10002278913300005764Tropical Forest SoilMSFVVVLFPEPRDVYIDDQMQGSTRAASGRPRALYVNAGSHVFRLGGRADVEPPTQTLDVPERPILNPFRVDFRKI*
Ga0066903_10013778623300005764Tropical Forest SoilMSYVVIRYPEPREVFIDDVAQGSNTAASGRPRALFCNAGKHTFRLSGANVDPPEQTVNVPECPLLNPYSVEFRKC*
Ga0075417_1004600023300006049Populus RhizosphereMSFVVVLFPEPRDVYIDDQLQGSTRAASGRPRALYVNAGSHVFRLGGRADVEPPTQTLDVPERPILNPFRVDFRKI*
Ga0075432_1003643623300006058Populus RhizosphereMSFVVVLFPEPRDVYIDDQLQGSTRAASGRPRALYVNAGSHVFRLGGRADVEPPTQMLDVPERPILNPFRVDFRKI*
Ga0066653_1058369423300006791SoilMSYVIVRFVVTREVYIDDQAQGSNLAASGKPRALFVGAGVHTFRLGGAADVDPPTQKLDVPERPILDPFCVAFHKC*
Ga0075428_10081654613300006844Populus RhizosphereMSYVIVQFSEPREVFIDDRSQGDNLAASGRPRALFVGAGVHTFRLGGQANVVPPTQTHDVPDRPILNPFRVVFAKIP*
Ga0075421_10001358473300006845Populus RhizosphereLSYVIVRFPEVREVYIDDQSQGSNTAASGRPRTLFVNAGVHTFRLSSSSNDVDPPSQQVDVPECPILDPFRVEFKKKC*
Ga0075421_10011863833300006845Populus RhizosphereMSYVIVLFPGHRDVYIDDQSQGSNVAASGKPRALFVNAGVHIFRLGGTPDVEPPSQRVDVPERPILDPFRVVFTQCP*
Ga0075421_10185361223300006845Populus RhizosphereIVRYPDPREVFIDDQGQGSNLAASGRPRTLFVDAGVHRFRLSGPNVDPAEQKCDVPECPILDPFVVEFKKC*
Ga0075433_1081008723300006852Populus RhizosphereMSYVKVLFPESRDVYIDDEWQGSNRAASGRPRALYVNAGQHTFRLGGAADVDPDKQVVDVPERPILDPFRVEFKKC*
Ga0075436_10016676123300006914Populus RhizosphereMSFVVVLFPEPRDVYIDDQLQGSTRAASGRPRALYVNAGSHVFRLGGRADVEPPTQMLDVPERPIL
Ga0099829_1000701223300009038Vadose Zone SoilMSFVLVIFPEPREVYIDDQSQGSTIAASGKPRALFVNAGKHTFRLSKADDVAPAEQTVDVPERPILNPFSVEFRKC*
Ga0099829_1094035513300009038Vadose Zone SoilMSYVIVRFPEPRQVYIDDAPQGSNKAASGKPRALFVNAGRHTFRLDGSGDVDPPNQDVDVPERPILHPFAVEFKKR*
Ga0099829_1104455113300009038Vadose Zone SoilMSYVIVRFEEPREVYIDDQAQGSNLAASGKPRALFVGAGVHTFRLGGAADVDPPTQKLYVPERPILDPFCVAFHKC*
Ga0105095_1027741623300009053Freshwater SedimentMSYVRVLFPEIREVFIDDQSQGSNIGGSGRPRTLFVNAGLHTFRLTSVANDVQPPSQDVDVPDRPILDPYTVEFKKC*
Ga0099830_1003292033300009088Vadose Zone SoilMSFVLVIFPEPREVYIDDQAQGSTIAASGKPRALFVNAGKHTFRLSKADDVAPAEQTVDVPERPILNPFSVEFRKC*
Ga0099828_1037448223300009089Vadose Zone SoilMSYVIVRFEEPREVYIDDQAQGSNLAASGQPRALFVGAGVHTFRLGGAADVDPPTQKLDVPERPILDPFCVAFHKC*
Ga0099828_1059385623300009089Vadose Zone SoilMSYVIVRFEEPREVYIDDQAQGSNLAASGKPRALFVGAGVHTFRLGGAANVDPPTQKLDVPERPILDPFRVDFKKC*
Ga0066709_10088977023300009137Grasslands SoilMSYVKVLFPESRDVYIDDEWQGSNRAASGRPRAFYVNAAQHTFRLGGAAVVDPDKQVVDVPDRPILDPFPVEFKKC*
Ga0114129_1038394213300009147Populus RhizosphereSYVIVRFPEVREVYIDDQSQGSNTAASGRPRTLFVNAGVHTFRLSSSSNDVDPPSQQVDVPECPILDPFRVEFKKKC*
Ga0114129_1065691023300009147Populus RhizosphereVSYVIVLFPDPREVYIDDAAQGSNKSASGRPRALFVNAGQHTFRLDGQNVAPPQQDVDVPDRSILDPFPVEFKKC*
Ga0105243_1007266923300009148Miscanthus RhizosphereVSVRPAGADAVLTSTREVWSMSYVVVRFPEPREVYIDDESQGSSTAASGKPRALFVNAGKHTFRLSGASVDPPEQTLNVPERPILNPYPVEFRKC*
Ga0105243_1242031223300009148Miscanthus RhizosphereMSYVVVRFPEPREVYIDDEGQGSNTAASGKPRALFVNAGKHTFRLSGAGVDPPEQTLNVPDRPILNPYPVEFRRC*
Ga0111538_1039242723300009156Populus RhizosphereLSYVIVRFPEVREVYIDDQSQGSNTAASGRPRALFVNAGVHTFRLSSSSNDVDPPSQQVDVPECPILDPFRVEFKKKC*
Ga0075423_1273255923300009162Populus RhizosphereVRRYRIQRAARRLADMSYVIVLFPGHRDVYIDDQRQGSNTAASGRPRVLFVNAGMHSFRLGGTQDVEPPVQRVDVPERAILDPFRVVFTQCP*
Ga0075423_1291359523300009162Populus RhizosphereSYVVVRYPEPRDVYIDDESQGSNTAASGKPRALFCSAGKHTFRLSGAGVDPSEQTITVPERPILNPYPVEFRKC*
Ga0105249_1011316033300009553Switchgrass RhizosphereMSYVIVKFPEPRQVLIDDQPQGSNLSASGRPRALFVNAGIHTFRLSGAGVDPAEQKCDVPECPILDPFAVEFKKC*
Ga0105249_1035892423300009553Switchgrass RhizosphereMSYVVVMFPDPREVYIDDESQGSNIAASGKPRALFVNAGKHTFRLSSAAADVRPPEQTVDVPERPILNPFPVEFKKC*
Ga0126380_1057070723300010043Tropical Forest SoilMSFVVVLFPELRDVYIDDQLQGSTRAASGRPRALYVNAGSHVFRLGGRADFVPPTQTLDVPERPILNPFRVDFRKI*
Ga0126384_1080911023300010046Tropical Forest SoilMSFVVVLFPEPRDVYIDDQLQGSTRAASGRPRALYVNAGSHVFRLGGRGDVEPPTQTLDVPERPILNPFRVEFRKV*
Ga0126382_1001034833300010047Tropical Forest SoilMSFVVVLFTEPRDVYIDDQLQGSTRAASGRPRALYVNAGSHVFRLGGRADVEPPTQPLDVPERPILNPFRVGFRKI*
Ga0134064_1024774013300010325Grasslands SoilMSCVIVRFVEPREVYIDDQAQGSNLAASGKPRALFVGAGVHTFRLGGAADVDPPTQKLDVPERPILDPFCVAFHKC*
Ga0134080_1016610123300010333Grasslands SoilRFVEPREVYIDDQAQGSNLAASGKPRALFVGAGVNTFRLGGAADVDPPTQKLDVPERPILDPFCVAFHTC*
Ga0126376_1050323423300010359Tropical Forest SoilMSFVVVLFPELRDVYIDDQLQGSTRAASGRPRALYVNAGSHVFRLGGRGDVEPPTQTLDVPERPILNPFRVAFRRI*
Ga0126377_1019416913300010362Tropical Forest SoilMSFVVVLFPEPRDVYIDDQLQGSTRAASGRPRALYVNAGSHVFRLGGRADVEPPTQTLDVPERP
Ga0126377_1359772223300010362Tropical Forest SoilMSFVVVLFPELRDVYIDDQLQGSTRAASGRPRALYVNAGSHVFRLGGRGDVEPPTQTLDVPERPILN
Ga0126383_1014306123300010398Tropical Forest SoilMSFVVVLFPEPRDVYIDDQLQGSTRAASGRPRALYVNAGSHVFRLGGRGDVEPPTQTLDVPERPILNPFRVDFRKI*
Ga0126383_1212887813300010398Tropical Forest SoilMSYVVVRYPEPRDVFIDDEAQGSCTAASGKPRVLFCNAGKHTFRLSGANVDPTEQTVNVPECPILNPYSVEFRKC*
Ga0134121_1146375913300010401Terrestrial SoilMSWVIVLFSEPREVYIDDQGQGSNVAASGRPRVLPVNAGKHTFRLGGPADVTPAEQRVDVPDRPILDPFCVEFKKC*
Ga0137392_1057344323300011269Vadose Zone SoilMSYVIVRFPGNREVYIDDQPQGSNNAASGRPRALFVGAGVHTFRLGGPADVDPPVQKLDVPERPILDPFSVTFQQCV*
Ga0137392_1073717323300011269Vadose Zone SoilMSYVIVRFEEPREVYIDDQAQGSNLAASGKPRALFVGAGVHTFRLGGAANVDPPTQKLDVPERPILDPFCVAFHKC*
Ga0137393_1009035733300011271Vadose Zone SoilMSFVLVIFPEPREVYIDDQSQGSNIAASGKPRALFVNAGKHTFRLSKADDVAPAEQTVDVPERPILNPFSVEFRKC*
Ga0137393_1051783823300011271Vadose Zone SoilMSYVIVRFEEPREVYIDDQAQGSNLAASGKLRALFVGAGVHTFRLGGAANVDPPTQKLDVPERPILDPFCVAFHKC*
Ga0137389_1181839913300012096Vadose Zone SoilMSYVIVRFEEPREVYIDDQAQGSNLAASGKPRALFVGAGVHTFRLGGAADVDPPTQKLDVPERPILDPFCVAFHKC*
Ga0137372_1069967813300012350Vadose Zone SoilMSYVTVLFPQHREVYIDDQPQGSNNAASGRPRVLYVGAGVHTFRLGGPMDVEPPTQKVDVPERPILDPFCVTFKCV*
Ga0137397_1003494843300012685Vadose Zone SoilMSWVIVLFSEPREVYIDDQGQGSNVAASGRPRVFPVNAGKHTFRLGGPANVSPAEQRLDVPERPILDPYCVEFKKC*
Ga0137396_1033052123300012918Vadose Zone SoilMSFVIVLFPEPRDVFIDDQPQGSSKAASGRPRALYVNAGSHVFRLGGRGDVQPPTQTLDVPERPILNPFRVEFRKC*
Ga0137394_1018350823300012922Vadose Zone SoilMSYVVVRFPEPREVYIDDEGQGSNTAASGKPRALFVNAGKHTFRLSGAGVDPLEQTLNVPERPILNPYPVEFRKC*
Ga0137394_1085729323300012922Vadose Zone SoilMSFVIVLFPEPRDVVIDDRPQGSSTAASGRPRALYVNAGSHAFRLSGRGDVQPPMQTLDVPERPILNPFRVEFRKC*
Ga0137419_1125219023300012925Vadose Zone SoilMSFVIVLFPEPRDVFIDDRPQGSSKAASGRPRALYVNAGSHVFRLGGRGDVQPPTQTLDVPERPILNPFRVEFR
Ga0137404_1002757223300012929Vadose Zone SoilMSFVIVLFPEPRDVFIDDRPQGSSKAASGRPRALYVNAGSHVFRLGGRGDVQPPTQTFDVPERPILNPFRVEFRKC*
Ga0126369_1338545313300012971Tropical Forest SoilMSYVVIRYPEPREVFIDDEAQGSNTSASGKPRVLFCNAGKHTFRLSGANVDPREQTVNVPECPILNPYSVEFRKC*
Ga0157373_1048301233300013100Corn RhizosphereMSYVVVRFPEPREVYIDDESQGSSTAASGKPRALFVNAGKHTFRLSGASVDPPEQTLNVPERPILNPYPV
Ga0157375_1004379823300013308Miscanthus RhizosphereVSVRPAGADAVLTSTREVWSMSYVVVRFPEPREVYIDDESQGSSTAASGKPRALFVNAGQHTFRLSGASVDPPEQTLNVPERPILNPYPVEFRKC*
Ga0134078_1020571213300014157Grasslands SoilREGRMSYVIVRFVEPREVYIDDQAQGSNLAASGKPRALFVGAGVHTFRLGGAADVDPPTQKLDVPERPILDPFCVAFHKC*
Ga0157380_1110632023300014326Switchgrass RhizosphereMSYVVVRFPEPREVYIDDEGQGSNTAASGKPRALFVNAGKHTFRLSGAGVDPPEQTVTVPERAILDPYPVDFRKC*
Ga0180063_101251313300014885SoilMSYVVVLFPEHREVYLDDQSQGSNTAASGKPRALFVNVGIHTFRLGGPPDVNPPTQKVDVPERSILDPFRVEFTRC*
Ga0180063_125321113300014885SoilMSYVIVLFPDHREVFIDDQGQGSTIAASGKPRVLFINAGIHTFRLGGPPDVEPPLQQLDVPERPILNPFRVDFKKSV*
Ga0137420_132194143300015054Vadose Zone SoilMSYVIVRFVEPREVYIDDQAQGATWPRAASPRAVRRRRVHTFRLGGAADVDPPTQKLDVPERPILDPFCVAFHKC*
Ga0137418_1094089013300015241Vadose Zone SoilMSFVIVLFPEPRDVFIDDRPQGSSKAASGRPRALYVNAGSNVFRLGGRGDVQPPTQTLDVPERPILNPFRVEFRKC*
Ga0132258_1000338243300015371Arabidopsis RhizosphereVIVDRAQGRGPQAMSYVVVRFPEPRDVYIDDEFQGSNTAASGKLRALFVNAGKHTFRLGGVGLEPPEQTVNVPDRPILNPYAVDFRKC*
Ga0132258_1365396423300015371Arabidopsis RhizosphereVRTLIREEAVMSYVVVRYPEPRGVYIDDESQGSNTAASGKPRALFCSAGKHTFRLSGACVDPPEQTITVPERPILNPYPVEFRKC*
Ga0134083_1003066723300017659Grasslands SoilMSFVIVLFPEPRDVFIDDRPQGSSKAASGRPRALYVNAGSHVFRLGGRGDVQPPMQTLDVPERPILNRFRVEFRKC
Ga0163161_1171232923300017792Switchgrass RhizosphereMSYVVVRFPEPREVYIDDEGQGSNTAASGKPRALFVNAGKHTFRLSGAGVDPPEQTLNVPDRPILNPYPVEFRRC
Ga0184610_101022623300017997Groundwater SedimentMSFVLVIFPEPREVYIDDQAQGSNIAASGKPRALFVNAGKHTFRLSKADDVAPAEQTVDVPERPILNPFSVEFRKC
Ga0184608_1053057413300018028Groundwater SedimentMSFVLVIFPEPREVYIDDQSQGSTIAASGKPRALFVNAGKHTFRLSKADGVAPAEQTVDVPERPILNPFSVEFRKC
Ga0184638_100519323300018052Groundwater SedimentMSFVLVIFPEPREVYIDDQAQGSTIAASGKPRALFVNAGKHTFRLSKADDVAPAEQTVDVPERPILNPFSVEFRKC
Ga0184626_1015562923300018053Groundwater SedimentKIPCMSYVIVRFPEPRQVYIDDAPQGSNKAASGKPRALFVNAGRHTFRLDGSGDVDPPKQDVDVPERPILDPFAVEFKKC
Ga0184637_1002107633300018063Groundwater SedimentMSYVIVRFPEPRQVYIDDAPQGSNKAASGKPRALFVNAGRHTFRLDGSGDVDPPKQDVDVPERPILDPFAVEFKKC
Ga0184637_1012987723300018063Groundwater SedimentMSYVIVLFPEHREVFIDDQGQGSNIAASGKPRALFINAGIHTFRLGGPQDVDPPSQQLDVPERPILNPFRVDFRKSV
Ga0184636_121889923300018068Groundwater SedimentMSFVLVIFPEPREVFIDDQSQGSTIAASGKPRALFVNAGKHTFRLSKADDVAPAEQTVDVPERPI
Ga0184640_1013911423300018074Groundwater SedimentMSFVLVIFPEPREVYIDDQSQGSTIAASGKPRALFVNAGKHTFRLSKADDVAPAEQTVDVPERPILNPFSVEFRKC
Ga0184609_1048316323300018076Groundwater SedimentMSFVLVIFPEPREVYIDDQSQGSTIAASGKPRALFVNAGKHTFRLSKADDVAPAEQTVDVPERPILNPFSVEFKKC
Ga0066655_1007192433300018431Grasslands SoilMSYVIVRFVEPREVYIDDQAQGSNLAASGKPRALFVGAGVHTFRLGGAADVDPPTQKLDVPERPILDPFCVAFHKC
Ga0190268_1091239723300018466SoilLSYVIVRFPEVREVYIDDQSQGSNTAASGRPRTLFVGAGVHTFRLSSSSNDVDPPSQQVDVPECPILDPFRVEFKKKC
Ga0066662_1004885623300018468Grasslands SoilMSYVIVRFVEPREVYIDDQAQGSNLAASGKPRALFVGAGVHTFRLGGAADVDPPTQKLDVPERPILDPFSVAFHKC
Ga0193727_107096623300019886SoilVIFPEPREVYIDDQSQGSTIAASGKPRALFVNAGKHTFRLSKADDVAPAEQTVDVPERPILNPFSVEFRKC
Ga0193739_101428233300020003SoilMSFVLVIFPEPREVYIDDQSQGSNIAASGKPRALFVNAGKHTFRLSKADGVAPAEQTVDVPERPILNPFSVEFKKC
Ga0179594_1000623023300020170Vadose Zone SoilMSFVIVLFPEPRDVFIDDRPQGSSKAASGRPRALYVNAGSHVFRLGGRGDVQPPTQTLDVPERPILNPFRVEFRKC
Ga0224452_101703923300022534Groundwater SedimentMSFVLVIFPEPREVYIDDQAQGSTIAASGKPRALFVNAGKHTFRLSKADGVAPAEQTVDVPERPILNPFSVEFKKC
Ga0222623_1000920333300022694Groundwater SedimentVIFPEPREVYIDDQSQGSTIAASGKPRALFVNAGKHTFRLSKADGVAPAEQTVDVPERPILNPFSVEFRKC
Ga0207654_1003515243300025911Corn RhizosphereMSYVVVRFPEPREVYIDDESQGSSTAASGKPRALFVNAGKHTFRLSGASVDPPEQTLNVPERPILNPYPVEFRKC
Ga0207681_1009653123300025923Switchgrass RhizosphereMSYVVVRFPEPREVYIDDESQGSSTAASGKPRALFVNAGQHTFRLSGASVDPPEQTLNVPERPILNPYPVEFRKC
Ga0207650_1112802723300025925Switchgrass RhizosphereMSYVVVLFPEPREVYIDDQGQGGTTAASGRPRALFVNAGRHTFRLSGPGVHPAEQTVEVPECPILRPFAVEFKKC
Ga0207712_1031587413300025961Switchgrass RhizosphereMSYVIVKFPEPRQVLIDDQPQGSNLSASGRPRALFVNAGIHTFRLSGAGVDPAEQKCDVPECPILDPFAVEFKKC
Ga0207648_1091769623300026089Miscanthus RhizosphereLSYVIVRFPEVREVYIDDQSQGSNTAASGRPRTLFVGAGKHTFRLGSSSNDVDPPSQQVDVPECPILDPFCVEFKKKC
Ga0207674_1101939523300026116Corn RhizosphereLSYVIVRFPEVREVYIDDQSQGSNTAASGRPRALFVNAGVHTFRLSSSSNDVDPPSQQIDVPECPILDPFCVEFKKKC
Ga0209375_114917423300026329SoilEVYIDDQAQGSNLAASGKPRALFVGAGVHTFRLGGAADVDPPTQKLDVPERPILDPFSVAFHKC
Ga0209267_106971333300026331SoilMSYVIVRFAEPREVYIDDQAQGSNLAASGKPRALFVGAGVHTFRLGGAADVDPPTQKLDVPERPILDPFSVAFHKC
Ga0257170_105487023300026351SoilVRFEEPREVYIDDQAQGSNLAASGKPRALFVGAGVHTFRLGGAANVDPPTQKLDVPERPILDPFCVAFHKC
Ga0257165_104205513300026507SoilMSYVIVRFVEPREVYIDDQAQGSNLAASGKPRALFVGAGVHTFRLGGAANVDPPTQDLNVPERPILDPFCVDFKKC
Ga0209160_110565623300026532SoilMSYVIVRFVEPREVYIDDQAQGSNLAASGKPRALFVGAGVHTFRLGGAPDVDPPTQKLDVPERPILDPFCVAFHKC
Ga0209180_1003937513300027846Vadose Zone SoilREVYIDDQAQGSTIAASGKPRALFVNAGKHTFRLSKADDVAPAEQTVDVPERPILNPFSVEFRKC
Ga0209814_1012000423300027873Populus RhizosphereMSFVVVLFPEPRDVYIDDQLQGSTRAASGRPRALYVNAGSHVFRLGGRADVEPPTQTLDVPERPILNPFRVDFRKI
Ga0209283_1028450923300027875Vadose Zone SoilMSYVIVRFEEPREVYIDDQAQGSNLAASGKPRALFVGAGVHTFRLGGAADVDPPTQKLDVPERPILDPFRVDFKKC
Ga0209382_1014015433300027909Populus RhizosphereLSYVIVRFPEVREVYIDDQSQGSNTAASGRPRTLFVNAGVHTFRLSSSSNDVDPPSQQVDVPECPILDPFRVEFKKKC
Ga0209382_1022747523300027909Populus RhizosphereMSYVIVLFPGHRDVYIDDQSQGSNVAASGKPRALFVNAGVHIFRLGGTPDVEPPSQRVDVPERPILDPFRVVFTQCP
Ga0209382_1153167023300027909Populus RhizosphereMSYVIVRYPDPREVFIDDQGQGSNLAASGRPRTLFVDAGVHRFRLSGPNVDPAEQKCDVPECPILDPFVVEFKKC
Ga0209382_1203418223300027909Populus RhizosphereVSYVIVLFPGHRDVYIDDQSQGSNTAASGRPRALFVNAGMHVFRLGGTPDVDPPSQRVDVPERPILDPFRVVFTQCP
Ga0268264_1032004143300028381Switchgrass RhizosphereMSYVVVRFPEPREVYIDDESQGSSTAASGKPRALFVNAGKHTFRLSGASVDPPEQTLSVPERPILNPYPVEFRKC
Ga0137415_1031192623300028536Vadose Zone SoilMSWVIVLFSEPREVYIDDQGQGSNVAASGRPRVFPVNAGKHTFRLGGPANVSPAEQRLDVPERPILDPYCVEFKKC
Ga0307281_1000655623300028803SoilMSFVLVIFPEPREVYIDDQAQGSNIAASGKPRALFVNAGMHTFRLSKADDVAPAEQTVDVPERPILNPFSVEFRKC
Ga0307498_1002635713300031170SoilSFVVVLFPEPRDVYIDDQPQGSTRAASGRPRALYVNAGSHVFRLGGRNDVEPPTQTFDVPERPILNPFRVEFRKI
(restricted) Ga0255310_1011092423300031197Sandy SoilMSYVIVRFEEPREVYIDDQAQGSNLAASGKPRALFVGAGVHTFRLGGAANVDPPTQDLNVPERPILDPFCVDFKKC
Ga0307497_1013303923300031226SoilYVVVRFPEPREVYIDDESQGSSTAASGKPRALFVNAGQHTFRLSGASVDPPEQTLNVPERPILNPYPVEFRKC
Ga0307497_1041815123300031226SoilMSFVVVLFPEPRDVYIDDQPQGSTRAASGRPRALYVNAGSHVFRLGGRNDVEPPTQTFDVPERPILNPFRVEFRKI
Ga0307469_1002751223300031720Hardwood Forest SoilMSFVVVLFPEPRDVYIDDQPQGSTRAASGRPRALYVNAGSHVFRLGGRNDVEPPTQMLDVPERPILNPFRVEFRKI
Ga0307469_1040100023300031720Hardwood Forest SoilMSFVIVLFPEPRDVFIDDQPQGSNKAASGRPRALYVNAGSHVFRLGGRGDVQPPTQTLDVPDRPILNPFRVEFRKC
Ga0307469_1232644213300031720Hardwood Forest SoilMSYVVVRYPEPRDVYIDDEGQGSNTAASGKPRALFCNAGKHTFRLSGACVDPPEQTINVPERPILNPYPVD
Ga0307468_10003056723300031740Hardwood Forest SoilMSFVIVLFPEPRDVYIDDQPQGSTRAASGRPRALYVNAGSHVFRLGGRNDVEPPTQMLDVPERPILNPFRVEFRKI
Ga0307468_10203231423300031740Hardwood Forest SoilVRFPEPREVYIDDEGQGSNTAASGKPRALFVNAGKHTFRLSGAGVDPPEQTLNVPDRPILNPYPVEFRRC
Ga0307468_10257270923300031740Hardwood Forest SoilRHVFIDDQPQGSNLSASGRPRILFVNAGIHTFRLSGAGVEPAEQKCDVPECPILDPFAVEFKKC
Ga0307473_1013691023300031820Hardwood Forest SoilMSFVIVLFPDPRDVYIDDQLQGSSKAASGRPRALYVNAGSHVFRLGGRADVEPPTQTLDVPERPILNPFRVDFRKI
Ga0307473_1057452213300031820Hardwood Forest SoilMSYVVVRYPEPRDVYIDDEGQGSNTAASGKPRALFCNAGKHTFRLRGAGVDPPEQTVNVPERPILNPYPVEFRKC
Ga0310900_1076776923300031908SoilPMSYVVVRYPEPRDVYIDDEGQGSNTAASGKPRALFVNAGKHTFRLSGAGVDPPEQTVNVPERPILNPYPVEFRKC
Ga0310897_1042409623300032003SoilMSYVVVRYPEPRDVYIDDEGQGSNTAASGKPRALFVNAGKHTFRLSGAGVDPPEQTVNVPERPILNPYPV
Ga0315281_1144418423300032163SedimentMSYVTVSCPERREVFIDDESQGDNTAASGRLRALFVGAGIHTFALGGAPNIAPLTQKLDVPEKSALDPFPVVFAMRP
Ga0307470_1007884433300032174Hardwood Forest SoilYIDDQPQGSTRAASGRPRALYVNAGSHVFRLGGRNDVEPPTQMLDVPERPILNPFRVEFRKI
Ga0307470_1122565413300032174Hardwood Forest SoilMSYVVVRYPEPRDVYIDDEAQGSNTAASGKPRALFVNAGKHTFRLSGPDVDPPEQTVNVPERPILNPYPVDFRKC
Ga0307470_1178131813300032174Hardwood Forest SoilMSFVVVLFPEPRDVYIDDQPQGSTRAASGRPRALYVNAGSHVFRLGGRNDVEPPTQMLDVPERP
Ga0307471_10027648523300032180Hardwood Forest SoilVLFPEPREGYIDDAGQGSNRAASGRPRALFVNAGQHTFRISGAGDVEPVDQTVDVPERPILDPFPVEFKKR
Ga0307471_10161506123300032180Hardwood Forest SoilMSFVIVLFPEPRDVFIDDQPQGSSKAASGRPRALYINAGSHVFRLGGRGDVQPPTQTLDVPERPILNPFRVEFRKC
Ga0307471_10215513323300032180Hardwood Forest SoilMSFVVVLFPEPRDVYIDDQPQGSTRAASGRPRALYVNAGSHVFRLGGRNDVEPPTQTLDVPERPILNPFRVEFRKI
Ga0307471_10259386123300032180Hardwood Forest SoilMSYVVVRFPEHREVYIDDEAQGSNTAASGKPRALFVNAGKHTFRLSGPDVDPPEQTVNVPERPILNPYPVDFRKC
Ga0335082_1100025623300032782SoilVSYVIVRFPEPREVYIDDEAQGSNTAASGKPRALFVNAGKHTFRLGGSGVDPAEQTMSVPERPILNPFVVVFKKC
Ga0335084_1031157323300033004SoilVSYVIVRFPEPREVYIDDEAQGSNTAASGRPRALFVNAGKHTFRLGGSGVDPTEQTMSVPERPILNPFVVEFKKC
Ga0335084_1125541013300033004SoilVSYAIVRFPEPREVYIDDEAQGSNTAASGKPRALFVNAGKHTFRLGGSGVDPAEQTMSVPERPILNPFVVEFKKC
Ga0364941_144639_169_3993300034417SedimentMSFVVVLFPEPRDVYIDDQPQGSTRAASGRPRALYVNAGSHVFRLGGRNDVVPSTQMLDVPERPILNPFRVEFRKI


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