Metagenome / Metatranscriptome Family F041468

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041468
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	39 residues
Representative Sequence	VPAAALVQIVIDEFYLQPRKPDYAALDREAAALVEGKK
Number of Associated Samples	134
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.25 %
% of genes near scaffold ends (potentially truncated)	98.12 %
% of genes from short scaffolds (< 2000 bps)	94.38 %
Associated GOLD sequencing projects	126
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (23.125 % of family members)
Environment Ontology (ENVO)	Unclassified (28.750 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.42% β-sheet: 0.00% Coil/Unstructured: 57.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF01979	Amidohydro_1	5.62
PF13594	Obsolete Pfam Family	3.75
PF13964	Kelch_6	2.50
PF00326	Peptidase_S9	1.88
PF01594	AI-2E_transport	1.25
PF13432	TPR_16	1.25
PF00581	Rhodanese	1.25
PF01797	Y1_Tnp	1.25
PF05532	CsbD	0.62
PF00582	Usp	0.62
PF00196	GerE	0.62
PF02787	CPSase_L_D3	0.62
PF13181	TPR_8	0.62
PF12801	Fer4_5	0.62
PF00591	Glycos_transf_3	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	1.25
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	1.25
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	81.25 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.62 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	81.25 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.62 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.62 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	46.25 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.25 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.62 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.62 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	46.25 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.25 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	0.62 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.62 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	46.25 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.25 %
Nitrosospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	0.62 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.62 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	46.25 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.62 %
Nitrosospira multiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira multiformis	0.62 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.62 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	46.25 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.62 %
Nitrosospira multiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira multiformis	0.62 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.62 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig65956	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
2166559005\|cont_contig66016	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	756	Open in IMG/M
2170459009\|GA8DASG02G6VCE	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	515	Open in IMG/M
2170459010\|GIO7OMY02GEOVI	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
2228664022\|INPgaii200_c0982468	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	767	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100342080	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	798	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101826274	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	754	Open in IMG/M
3300000550\|F24TB_10988436	All Organisms → cellular organisms → Bacteria	1870	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10126536	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	533	Open in IMG/M
3300000890\|JGI11643J12802_10573398	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1284	Open in IMG/M
3300000891\|JGI10214J12806_10742963	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	716	Open in IMG/M
3300000955\|JGI1027J12803_101356689	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	527	Open in IMG/M
3300000955\|JGI1027J12803_106274036	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	845	Open in IMG/M
3300001686\|C688J18823_11031017	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	522	Open in IMG/M
3300004153\|Ga0063455_100621584	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	708	Open in IMG/M
3300004153\|Ga0063455_100726356	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	674	Open in IMG/M
3300004157\|Ga0062590_101027023	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	787	Open in IMG/M
3300004643\|Ga0062591_102261840	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	567	Open in IMG/M
3300005179\|Ga0066684_10263507	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1135	Open in IMG/M
3300005290\|Ga0065712_10014989	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1940	Open in IMG/M
3300005332\|Ga0066388_104324565	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300005338\|Ga0068868_101679264	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300005446\|Ga0066686_10878670	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	590	Open in IMG/M
3300005450\|Ga0066682_10385874	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	899	Open in IMG/M
3300005450\|Ga0066682_10456442	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	812	Open in IMG/M
3300005454\|Ga0066687_10844013	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300005456\|Ga0070678_101581877	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	615	Open in IMG/M
3300005467\|Ga0070706_100830664	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	855	Open in IMG/M
3300005553\|Ga0066695_10228624	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1171	Open in IMG/M
3300005553\|Ga0066695_10480705	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	765	Open in IMG/M
3300005555\|Ga0066692_10730867	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300005556\|Ga0066707_10486608	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	801	Open in IMG/M
3300005557\|Ga0066704_10859793	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300005560\|Ga0066670_10107934	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1570	Open in IMG/M
3300005575\|Ga0066702_10281338	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1015	Open in IMG/M
3300005713\|Ga0066905_100102149	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1950	Open in IMG/M
3300005764\|Ga0066903_103219462	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	883	Open in IMG/M
3300005764\|Ga0066903_104078650	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	782	Open in IMG/M
3300005764\|Ga0066903_107003474	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	585	Open in IMG/M
3300005764\|Ga0066903_108412745	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300006028\|Ga0070717_10428990	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1189	Open in IMG/M
3300006028\|Ga0070717_12018987	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	519	Open in IMG/M
3300006031\|Ga0066651_10679160	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	552	Open in IMG/M
3300006032\|Ga0066696_10050727	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2328	Open in IMG/M
3300006032\|Ga0066696_10706313	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	647	Open in IMG/M
3300006034\|Ga0066656_10203562	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1261	Open in IMG/M
3300006046\|Ga0066652_100074962	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2651	Open in IMG/M
3300006046\|Ga0066652_101810066	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300006163\|Ga0070715_10207790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	999	Open in IMG/M
3300006791\|Ga0066653_10658854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	537	Open in IMG/M
3300006797\|Ga0066659_10920681	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300006797\|Ga0066659_11503057	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	564	Open in IMG/M
3300006800\|Ga0066660_10683194	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	846	Open in IMG/M
3300006844\|Ga0075428_100296818	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1738	Open in IMG/M
3300009098\|Ga0105245_12294575	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	593	Open in IMG/M
3300009137\|Ga0066709_100366043	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1987	Open in IMG/M
3300009137\|Ga0066709_100652244	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1507	Open in IMG/M
3300009156\|Ga0111538_13712778	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300009162\|Ga0075423_10842949	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300009792\|Ga0126374_10137508	All Organisms → cellular organisms → Bacteria	1459	Open in IMG/M
3300010046\|Ga0126384_10689521	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	904	Open in IMG/M
3300010047\|Ga0126382_10235869	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300010048\|Ga0126373_11186646	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	829	Open in IMG/M
3300010320\|Ga0134109_10203402	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	732	Open in IMG/M
3300010322\|Ga0134084_10359075	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	557	Open in IMG/M
3300010358\|Ga0126370_11564043	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	629	Open in IMG/M
3300010364\|Ga0134066_10046211	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1100	Open in IMG/M
3300010366\|Ga0126379_12491772	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	616	Open in IMG/M
3300010376\|Ga0126381_102628276	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300011271\|Ga0137393_10251984	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300012189\|Ga0137388_10976635	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300012198\|Ga0137364_10054375	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	2678	Open in IMG/M
3300012198\|Ga0137364_10781965	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	721	Open in IMG/M
3300012198\|Ga0137364_11045740	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	616	Open in IMG/M
3300012202\|Ga0137363_11448910	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	577	Open in IMG/M
3300012205\|Ga0137362_10522260	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1026	Open in IMG/M
3300012208\|Ga0137376_11114100	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	675	Open in IMG/M
3300012210\|Ga0137378_10585736	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1025	Open in IMG/M
3300012210\|Ga0137378_11626184	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300012212\|Ga0150985_120761669	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300012285\|Ga0137370_10347120	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	892	Open in IMG/M
3300012349\|Ga0137387_10793659	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	685	Open in IMG/M
3300012353\|Ga0137367_10013468	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	6496	Open in IMG/M
3300012353\|Ga0137367_10068321	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2642	Open in IMG/M
3300012356\|Ga0137371_10202381	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1555	Open in IMG/M
3300012360\|Ga0137375_11291273	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	552	Open in IMG/M
3300012361\|Ga0137360_10680108	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	883	Open in IMG/M
3300012361\|Ga0137360_11355125	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	614	Open in IMG/M
3300012362\|Ga0137361_10557795	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1051	Open in IMG/M
3300012582\|Ga0137358_10912089	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300012898\|Ga0157293_10129205	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300012922\|Ga0137394_10980893	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300012948\|Ga0126375_10683192	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	797	Open in IMG/M
3300012957\|Ga0164303_10217933	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300012958\|Ga0164299_10094602	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1537	Open in IMG/M
3300012961\|Ga0164302_10899519	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	679	Open in IMG/M
3300012961\|Ga0164302_11544287	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300012971\|Ga0126369_10600644	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1170	Open in IMG/M
3300012971\|Ga0126369_13078792	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300012976\|Ga0134076_10607275	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300012977\|Ga0134087_10061294	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1505	Open in IMG/M
3300012987\|Ga0164307_11520255	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	566	Open in IMG/M
3300012988\|Ga0164306_11694705	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300012989\|Ga0164305_10892703	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	746	Open in IMG/M
3300013306\|Ga0163162_12722344	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	569	Open in IMG/M
3300014325\|Ga0163163_10463077	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300014325\|Ga0163163_12230627	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	607	Open in IMG/M
3300014829\|Ga0120104_1050747	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300015245\|Ga0137409_10292583	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300015356\|Ga0134073_10129560	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	777	Open in IMG/M
3300015371\|Ga0132258_13920725	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1011	Open in IMG/M
3300015372\|Ga0132256_102890208	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	577	Open in IMG/M
3300015372\|Ga0132256_103094333	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300015373\|Ga0132257_104583472	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300015374\|Ga0132255_100941546	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1293	Open in IMG/M
3300015374\|Ga0132255_103037065	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300016357\|Ga0182032_10487706	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1011	Open in IMG/M
3300016445\|Ga0182038_10032594	All Organisms → cellular organisms → Bacteria	3301	Open in IMG/M
3300018000\|Ga0184604_10043698	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1207	Open in IMG/M
3300018000\|Ga0184604_10330424	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300018028\|Ga0184608_10174992	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300018061\|Ga0184619_10170639	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	996	Open in IMG/M
3300018433\|Ga0066667_10551928	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	956	Open in IMG/M
3300018433\|Ga0066667_11031608	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	710	Open in IMG/M
3300019885\|Ga0193747_1048999	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1050	Open in IMG/M
3300020004\|Ga0193755_1083585	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1022	Open in IMG/M
3300020018\|Ga0193721_1149627	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	564	Open in IMG/M
3300020062\|Ga0193724_1037009	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1038	Open in IMG/M
3300021080\|Ga0210382_10182809	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300021344\|Ga0193719_10204536	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	842	Open in IMG/M
3300021413\|Ga0193750_1034331	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1136	Open in IMG/M
3300025915\|Ga0207693_11094627	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	605	Open in IMG/M
3300025981\|Ga0207640_10994625	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	737	Open in IMG/M
3300025986\|Ga0207658_10299326	All Organisms → cellular organisms → Bacteria	1385	Open in IMG/M
3300026023\|Ga0207677_11457006	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	632	Open in IMG/M
3300026307\|Ga0209469_1012353	All Organisms → cellular organisms → Bacteria	3170	Open in IMG/M
3300026309\|Ga0209055_1211164	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300026316\|Ga0209155_1281501	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	516	Open in IMG/M
3300026326\|Ga0209801_1011429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira multiformis	4591	Open in IMG/M
3300026537\|Ga0209157_1349139	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	533	Open in IMG/M
3300026538\|Ga0209056_10152897	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1764	Open in IMG/M
3300026548\|Ga0209161_10528793	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
3300026550\|Ga0209474_10070391	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2432	Open in IMG/M
3300028708\|Ga0307295_10106650	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	758	Open in IMG/M
3300028711\|Ga0307293_10231067	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300028717\|Ga0307298_10136343	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300028719\|Ga0307301_10143673	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300028778\|Ga0307288_10350423	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	595	Open in IMG/M
3300028787\|Ga0307323_10259029	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300028828\|Ga0307312_10547306	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	765	Open in IMG/M
3300028828\|Ga0307312_10867572	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300030848\|Ga0075388_11581133	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	732	Open in IMG/M
3300031114\|Ga0308187_10406810	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	539	Open in IMG/M
3300031231\|Ga0170824_126516311	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	863	Open in IMG/M
3300031446\|Ga0170820_16237517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	896	Open in IMG/M
3300031469\|Ga0170819_14216406	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1231	Open in IMG/M
3300031562\|Ga0310886_10971988	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300031820\|Ga0307473_11339905	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300031833\|Ga0310917_10736361	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	667	Open in IMG/M
3300032180\|Ga0307471_101860830	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	752	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.88%
Host-Associated	Host-Associated	12.50%
Engineered	Engineered	0.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.75%
Plants	Host-Associated → Plants	12.50%
Aquatic	Environmental → Aquatic	3.12%
Modeled	Engineered → Modeled	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.38%
Sediment	Environmental → Aquatic → Sediment	2.50%
Roots	Host-Associated → Plants → Roots	1.25%
Freshwater	Environmental → Aquatic → Freshwater	0.62%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.75%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.88%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.25%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.62%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.62%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.12%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	26.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.25%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.25%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.25%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.62%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.62%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.62%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.37%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.12%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.12%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.50%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.25%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.25%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.25%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.25%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.62%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.62%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_16175580	2124908045	Soil	LAVPAAALVQIVIDEFYLQPRKLDYAGFDREAARLVEGKK
cont_0016.00004740	2166559005	Simulated	VQIVIDEFYLQPRRPDYAALDREAAALVEGKGDALMHA
F47_00084110	2170459009	Grass Soil	LGCWVVFLAVPAAALVQIVIDEFYLQPRKPDYAALDREAAALVEGKK
F62_07529080	2170459010	Grass Soil	LGLFLAVPAAALVQIIIDEFYLQPRKIDAAALDLEAAALVEGRR
INPgaii200_09824682	2228664022	Soil	GVFLAVPAAALVQIVIDEFYLRRRNPDYAALDREAAVLVEGKK
INPhiseqgaiiFebDRAFT_1003420801	3300000364	Soil	LFLAVPAAALVQIVIDEFYLQPRKIDARALDQDAAFLVEGRK*
INPhiseqgaiiFebDRAFT_1018262741	3300000364	Soil	LAVPAAALVQIVIDEFYLRRRNPDYAALDREAAVLVEGKK*
F24TB_109884361	3300000550	Soil	PAAALVHIVIDEFYLRPRKPDYDALDREAAALVEGKN*
AF_2010_repII_A001DRAFT_101265362	3300000793	Forest Soil	LVQIVVDEFYLQPRNPDYTSLDREADALVKGKNRA*
JGI11643J12802_105733981	3300000890	Soil	FLAVPAAALVQIVIDEFYLQPRKIDAAALDREAAALVEGKK*
JGI10214J12806_107429632	3300000891	Soil	AAALVQIVIDEFYLQPRKLDYAGFDREAARLVEGKK*
JGI1027J12803_1013566892	3300000955	Soil	LGVFIAVPAAALVQIVIDEFYLQPRRPDYAALNREAAALVEGKK*
JGI1027J12803_1062740363	3300000955	Soil	AALVQIVIDEFYLQPRKPNYAALDREAAALVEGKKERR*
C688J18823_110310172	3300001686	Soil	LAVPAAALVQIVIDEFYLQPRKPDYVALDREAAAIVEGER*
Ga0063455_1006215841	3300004153	Soil	LAVPAAALVHIVIDEFYLQPRNPDYAALDREAATLVEGKP*
Ga0063455_1007263561	3300004153	Soil	GLFLAVPAAALVQIVIDEFYLQPRKIDAAALEREAAVLVEGRK*
Ga0062590_1010270231	3300004157	Soil	LFLAVPAAALVQIVIDEFYLEPRKIDAAALDREAAALIEGRK*
Ga0062591_1022618402	3300004643	Soil	LAVPAAALVQIVIDEFYLQPRKIDAAALDREAAVLVEGRK*
Ga0066684_102635072	3300005179	Soil	AVPAAALVQIVIDEFYLQSRKVESAILEREAAELVEGKNQDSA*
Ga0065712_100149891	3300005290	Miscanthus Rhizosphere	LFLAVPAAALVQIVIDEFYLQPRKVDAAALDREAAVLVEGRK*
Ga0066388_1043245652	3300005332	Tropical Forest Soil	LAVPAAALVQIVVDEFYLQPRKIDAAALDREAAALVEGRK*
Ga0068868_1016792642	3300005338	Miscanthus Rhizosphere	LAVPAAALVQIVIDEFYLQPRKIDARALDQDAAVLVEGRK*
Ga0066686_108786702	3300005446	Soil	LAVPAAALVQIVIDEFYLQPRKVDYAALHREAAALVEGRM*
Ga0066682_103858742	3300005450	Soil	VFLAVPAAALVQIVIDEFYLEPRKLDRAALDREAAALVEGRE*
Ga0066682_104564422	3300005450	Soil	FLAVPAAALVHIVIDEFYLQPRNPDYAALDREAATLVEGKP*
Ga0066687_108440132	3300005454	Soil	VFLAVPAAALVQIVIDEFYLQPRKLDYAQLDSEAAALVEGKK*
Ga0070678_1015818772	3300005456	Miscanthus Rhizosphere	AVPAAALVQIVIDEFYLRPRHLNYAELHREATALVSGSPKP*
Ga0070706_1008306641	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	GVFLAVPAAALVQIVIDEFYLQPRKPDYAAIDREAAALVEGKK*
Ga0066695_102286242	3300005553	Soil	ALFQIAIDEFYLRPRKPDYTAIDREAAALVEGKN*
Ga0066695_104807052	3300005553	Soil	AALVQIVIDEFYLEPRKLDRAALDREAAALVEGRE*
Ga0066692_107308671	3300005555	Soil	AVPAAALVQIVIDEFYLQPRKPDYAALDREASALVEGQK*
Ga0066707_104866082	3300005556	Soil	VPAAALVQIVIDEFYLQPRKPNYAALDREAAALVDGKR*
Ga0066704_108597931	3300005557	Soil	AVPAAALVQIVIDEFYLQPRKPDYAALDREASVLVEGNR*
Ga0066670_101079343	3300005560	Soil	AVPAAALVQIVIDEFYLQPRKIDAAVLDREAAALVEAKH*
Ga0066702_102813381	3300005575	Soil	ALFQIAIDEFYLRPRQPDYAAIDHEAAALIEGKK*
Ga0066905_1001021496	3300005713	Tropical Forest Soil	PAAALVQIVIDEFYLQPRKIDHATVDRQADALLGGRK*
Ga0066903_1032194621	3300005764	Tropical Forest Soil	AAALVQIVIDEFYLQPRNIDAAALDRDAAALVEGR*
Ga0066903_1040786502	3300005764	Tropical Forest Soil	AVPAAALVQIVVDEFYLQPRMIDAAALDREAAALVEGRK*
Ga0066903_1070034741	3300005764	Tropical Forest Soil	PAAALVQIVIDEFYLQPRKPDYGALNKEAAALVEGKK*
Ga0066903_1084127451	3300005764	Tropical Forest Soil	VPAAALVQIVVDEFYLQPRKIDAAALDREAAALVEGRK*
Ga0070717_104289901	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VPAAALVQIVIDEFYLQPRKPDYTALDREAATLVEGKK*
Ga0070717_120189871	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VPAAALVQIVIDEFYLQPRKPDYTALDREAAALVEGKK*
Ga0066651_106791601	3300006031	Soil	VPAAALVQIVIDEFYLQPRKIDAAMLDREAAALVEAKH*
Ga0066696_100507272	3300006032	Soil	PAAALVQIVIDEFYLQPRKPDYAALDKEAAALVEGKK*
Ga0066696_107063132	3300006032	Soil	AALFQIAIDEFYLRPRKPDYAAIDREAAAVIEGKS*
Ga0066656_102035622	3300006034	Soil	ALVQIVIDEFYLQPRKPDYAALDREAAALVEGKK*
Ga0066652_1000749624	3300006046	Soil	PAAALVQIMIDEFYLHPRKINAAALDREAAALVEGRK*
Ga0066652_1018100662	3300006046	Soil	FLAVPAAALVQIIIDEFYLQPRKVNYAALDREAAGLVEGKN*
Ga0070715_102077901	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	ALVQIVIDEFYLQPRKIDGAALDREAAALVEGRQ*
Ga0066653_106588541	3300006791	Soil	ALVQIVIDEFYLQPRKPDYAALDKEAAALVEGKTG*
Ga0066659_109206811	3300006797	Soil	AVPAAALFQIAVDEFYLRPRNPDYTAIDREAAALVEGKN*
Ga0066659_115030572	3300006797	Soil	VPAAALVQIVIDEFYLQPRKPDYAALDKEAAALVEGKK*
Ga0066660_106831942	3300006800	Soil	AAALVQIVIDEFYLQPRKPDYAALDKEAAALVEGKK*
Ga0075428_1002968182	3300006844	Populus Rhizosphere	AAALLQIVIDEFYLQPRKVESAILEREAAALVEGKKQDSA*
Ga0105245_122945752	3300009098	Miscanthus Rhizosphere	GLFLAVPAAALVQIVIDEFYLQPRKIDAAALDREAAVLVEGKK*
Ga0066709_1003660432	3300009137	Grasslands Soil	PAAALVQIVIDEFYLEPRKLDLAALDRESAALVEGRE*
Ga0066709_1006522442	3300009137	Grasslands Soil	FLAVPAAALVQIVIDEFYLEPRKLDRAALDREAAALVEGRE*
Ga0111538_137127782	3300009156	Populus Rhizosphere	VPAAALVQIVVDEFYLQPRKIDAAALDREAATLVEGRK*
Ga0075423_108429492	3300009162	Populus Rhizosphere	FLAVPAAALLQIVIDEFYLQPRKVESAILEREAAALVEGKKQDSA*
Ga0126374_101375082	3300009792	Tropical Forest Soil	LAVPAAALVQIVIDEFYLQPRKINAAALDREAAALLEGRK*
Ga0126384_106895212	3300010046	Tropical Forest Soil	AALVQIVIDEFYLEPRKMDRAALDREAAALVEGRK*
Ga0126382_102358691	3300010047	Tropical Forest Soil	AAALVQIVIDEFYLQPRKIDHATVDRQADALLGGRK*
Ga0126373_111866462	3300010048	Tropical Forest Soil	AVPAAALVQIVIDEFYLQPRKPNYAALDREAAALVEGKKEGW*
Ga0134109_102034022	3300010320	Grasslands Soil	ALVQIVIDEFYLQPRKMDAEALDREAAALVEGKK*
Ga0134084_103590751	3300010322	Grasslands Soil	VFLAVPAAALVQIIIDEFYLQPRKVNYAALDREAAGLVEGNK*
Ga0126370_115640432	3300010358	Tropical Forest Soil	AAALVQIVIDEFYLQPRKLDYASFDREAARLVDGKQ*
Ga0134066_100462111	3300010364	Grasslands Soil	PAAALFQIAIDEFYLRPRKPDYAAIDREAAAVIEGKS*
Ga0126379_124917721	3300010366	Tropical Forest Soil	AAALVQIVIDEFYLQPHKPDYAALDKEAAALVDGKK*
Ga0126381_1026282762	3300010376	Tropical Forest Soil	AAALVQIVIDEFYLEPRKMDRAALDREAAALVEGRK*
Ga0137393_102519841	3300011271	Vadose Zone Soil	ILAVPAAALVQIVVDEFYLKPRQLNNAELDREAAALVEGRTKSD*
Ga0137388_109766352	3300012189	Vadose Zone Soil	ALVQIVIDEFYLRPRNPDYAAIDREAAALVEGKSER*
Ga0137364_100543754	3300012198	Vadose Zone Soil	VPAAALVQIVIDEFYLRPHKPDYAAIDREAAALVEGT*
Ga0137364_107819652	3300012198	Vadose Zone Soil	LAVPAAALVQIVIDEFYLQPRKPDYAALDKEAAALVEGKTERR*
Ga0137364_110457401	3300012198	Vadose Zone Soil	LAVPAAALVQIVIDEFYLQPRKPDYAALDKEAAALVEGKTG*
Ga0137363_114489101	3300012202	Vadose Zone Soil	AVPAAALVQILIDEFYLQPRKPDYSALDREAAALVEGKK*
Ga0137362_105222602	3300012205	Vadose Zone Soil	LFQIAIDEFYLRPRKPDYAAIDHEAAALVEGKKRR*
Ga0137376_111141002	3300012208	Vadose Zone Soil	FLAVPAAALVQIVIDEFYLQPRKIDAAVLDREAAALVEAKH*
Ga0137378_105857361	3300012210	Vadose Zone Soil	AVPAAALVQIVIDEFYLQPRKPDYAAIDREAAALLEGKK*
Ga0137378_116261841	3300012210	Vadose Zone Soil	AALVQIVIDEFYLQPRKPNYAALDHEAAALVEGKKERR*
Ga0150985_1207616691	3300012212	Avena Fatua Rhizosphere	AALVQIVIDEFYLHSRKMDATALDREAAALVEGEK*
Ga0137370_103471201	3300012285	Vadose Zone Soil	VPAAALVQIVIDEFYLQPRKPNFAALDKEAAALVEGKR*
Ga0137387_107936592	3300012349	Vadose Zone Soil	VPAAALVQIVIDEFYLQPRKVDYAALDKEAAALVEGKK*
Ga0137367_100134685	3300012353	Vadose Zone Soil	VPAAALVHIVIDEFYLRPRKPDYAALDREAAALVEGKR*
Ga0137367_100683211	3300012353	Vadose Zone Soil	AAALAQIVIDEFYLQPRKPDYVALDREAAALVEGKK*
Ga0137371_102023812	3300012356	Vadose Zone Soil	AAALVQIVIDEFYLRPRKLDHATLDREAAGLVEGKNKRD*
Ga0137375_112912731	3300012360	Vadose Zone Soil	VFLAVPAAALVQIVIDEFYLQPRKPDYHALDREAAALVEGKTR*
Ga0137360_106801082	3300012361	Vadose Zone Soil	AVPAAALVQIVIDEFYLEPRKLDRGALDREAAALVEGRE*
Ga0137360_113551251	3300012361	Vadose Zone Soil	ILAVPAAALVQIVIDEFYIKPRQLDKTAIQGEAAALVRHER*
Ga0137361_105577952	3300012362	Vadose Zone Soil	AAALVQIVIDEFYLQPRKPDYAALDREAAALVEGKK*
Ga0137358_109120892	3300012582	Vadose Zone Soil	PAAGLVQIVIDEFYLRPRNPDYAALDREAAALVEGKK*
Ga0157293_101292051	3300012898	Soil	QGLFLAVPAAALVQIVIDEFYLQPRKIDAAALDREAAVLVEGRK*
Ga0137394_109808932	3300012922	Vadose Zone Soil	AVPAAALVQIVLDEFYFKPRHLNFTEINREAAALVKGRGG*
Ga0126375_106831922	3300012948	Tropical Forest Soil	ALAQIVIDEFYLQPRKPDYAALDKEAAALVDGKK*
Ga0164303_102179333	3300012957	Soil	VGLFLAVPAAALVQIVVDEFYLQPRRIHAAALDREAAALVEGRK*
Ga0164299_100946022	3300012958	Soil	LFLAVPAAALVQIVIDEFYLQPRKIDSAALDREAAVLVEGRK*
Ga0164302_108995192	3300012961	Soil	AAALVQIVIDEFYLQPRKIDAAALDREAAALVEGRK*
Ga0164302_115442873	3300012961	Soil	AVPAAALVQIVIDEFYLQPRRPDYAAIDREAAALVEDKK*
Ga0126369_106006442	3300012971	Tropical Forest Soil	PAAALVQIVIDEFYLQPRKPDYTALDKEAAALVEGKR*
Ga0126369_130787922	3300012971	Tropical Forest Soil	AALVQIVIDEFYLQPRKIDSIALDREAATLVEGRK*
Ga0134076_106072752	3300012976	Grasslands Soil	AAALVQIIIDEFYLRPRNPDYAALDREAAALVEGKS*
Ga0134087_100612942	3300012977	Grasslands Soil	GVFLAVPAAALVQIVIDEFYLQPRGPDYAALDREAAVLVEGK*
Ga0164307_115202551	3300012987	Soil	FLAVPAAALVQIVVDEFYLQPRKPDYAALDSEAAVLVEGKSRNTL*
Ga0164306_116947052	3300012988	Soil	PAAALVQIVIDEFYLQPRKIDAAALDREAAALVEGRK*
Ga0164305_108927032	3300012989	Soil	AVPAAALVQIVIDEFYLQPRKIDAAALDREAAALIEGRK*
Ga0163162_127223442	3300013306	Switchgrass Rhizosphere	AVPAAALVQIVIDEFYLQPRKIDAAALDREAAVLVEGKK*
Ga0163163_104630772	3300014325	Switchgrass Rhizosphere	LAVPAAALVQIVVDEFYLQPRRIDAAALDREAATLVEGKK*
Ga0163163_122306272	3300014325	Switchgrass Rhizosphere	AVPAAALVQIVIDEFYLQPRKIDAAALDREAAALVEGRK*
Ga0120104_10507472	3300014829	Permafrost	ALTQILIDEFYLKPLKLDKSDIDREAAALLRGKSQET*
Ga0137409_102925833	3300015245	Vadose Zone Soil	GVFLAFPAAALVQIVIDEFYLQPRKLDYAQLDSEAAALVEGKK*
Ga0134073_101295602	3300015356	Grasslands Soil	ALVQIVIDEFYLQPRKPNFAALDKEAAALVEGKR*
Ga0132258_139207252	3300015371	Arabidopsis Rhizosphere	LFLAVPAAALVQIVIDEFYLQPRKIDAATLDREAAALVEGRK*
Ga0132256_1028902081	3300015372	Arabidopsis Rhizosphere	VFIAVPAAALVQIVIDEFYLQPRKPDYAALDKEAAVLVEGKK*
Ga0132256_1030943332	3300015372	Arabidopsis Rhizosphere	LGLFLAVPAAALVQIVIDEFYLQPRKIDAAALDREAAALIEGRK*
Ga0132257_1045834722	3300015373	Arabidopsis Rhizosphere	VPAAALVQIVVDEFYLQPRKIDRAALDREAAALVEGRQ*
Ga0132255_1009415462	3300015374	Arabidopsis Rhizosphere	FLAVPAAALVQIVIDEFYLQPRKIDAAALDREAAALVEGRK*
Ga0132255_1030370652	3300015374	Arabidopsis Rhizosphere	FLAVPAAALVQIVIDEFYLRPRNIDSAALDREAAALAEGRK*
Ga0182032_104877062	3300016357	Soil	AVPAAALVQIVIDEFYLEPRRLDRAALDREAAALVEGRE
Ga0182038_100325941	3300016445	Soil	VFVAVPAAALVQIVVDEFYLQPRKIDAAALDREAASLVEGRK
Ga0184604_100436981	3300018000	Groundwater Sediment	AALVQIVVDEFYLQPRRIDAVALDREAAAIVEGRK
Ga0184604_103304242	3300018000	Groundwater Sediment	AALVQIVIDEFYLQPRELDYTGFDREAARLVEGKN
Ga0184608_101749922	3300018028	Groundwater Sediment	AALVQIVIDEFYLQPRKIDAATLDREAAALVEGRK
Ga0184619_101706392	3300018061	Groundwater Sediment	VFLAVPAAALVQIVIDEFYLQPRRIDADALDREAAALIEGRK
Ga0066667_105519281	3300018433	Grasslands Soil	GVPAAALVLIVIDGFYLRPRKSDYAALDREAAALVEGKR
Ga0066667_110316082	3300018433	Grasslands Soil	VPAAALVQIVIDEFYLQPRKIDAAALDREAAALVEGRK
Ga0193747_10489992	3300019885	Soil	VPAAALVQIVIDEFYLQPRKIDAAALDREAADLVEDRK
Ga0193755_10835853	3300020004	Soil	AALVQIVIDEFYLQPREPDYTALDREAAALVEGKK
Ga0193721_11496271	3300020018	Soil	AVPAAALVQIVIDEFYLQPRKPDYAALDCEAAALVEGKVERLKR
Ga0193724_10370092	3300020062	Soil	AVPAAALVQIVIDEFYLQPRKIDAAALDREAAALIEGRK
Ga0210382_101828092	3300021080	Groundwater Sediment	AAALVQIVIDEFYLRPRNPDYAALDREAAALVEGKK
Ga0193719_102045362	3300021344	Soil	AAALVQIVIDEFYLQPRKLDYAGFDREAARLVEGKK
Ga0193750_10343311	3300021413	Soil	MPAASLVQIVVDEFYLQPRRIDAAALDREAAALVEGRK
Ga0207693_110946272	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	PAAALVQIVIDEFYVKPRKLDHATIQREAAALVRHER
Ga0207640_109946251	3300025981	Corn Rhizosphere	PAAALVQIVIDEFYLQPRKIDAAALEREASVLVEGRK
Ga0207658_102993261	3300025986	Switchgrass Rhizosphere	LAVPAAALVQIVIDEFYLQPRKIDAAALDREAAVLVEGKK
Ga0207677_114570061	3300026023	Miscanthus Rhizosphere	GLFLAVPAAALVQIVIDEFYLQPRKIDARALDQDAAVLVEGRK
Ga0209469_10123531	3300026307	Soil	PAAALVQIVIDEFYLRPHKPDYAAIDREAAALVEGT
Ga0209055_12111642	3300026309	Soil	VFLAVPAAALVQIVIDEFYLEPRKMDRTALDREAAALVEGRK
Ga0209155_12815011	3300026316	Soil	GLFLAVPAAALVQIVIDEFYLQARKIDSIALDREAAALVEGKR
Ga0209801_10114291	3300026326	Soil	LAVPAAALVQIVIDEFYLQPRKLDYAALDNEATALVEAKK
Ga0209157_13491392	3300026537	Soil	AAALVQIMIDEFYLQPRKPNYAALDREAAGLVEGKK
Ga0209056_101528971	3300026538	Soil	FLAVPAAALVQIVIDEFYLQPRRPDYAAIDREAAALVEGKK
Ga0209161_105287932	3300026548	Soil	AAALVQIIIDEFYLQPRKVNYAALDREAAGLVEGKK
Ga0209474_100703911	3300026550	Soil	FLAVPAAALVQIVIDEFYLQPRKIDAAVLDREAAALVEAKH
Ga0307295_101066502	3300028708	Soil	FLAVPAAALVQIVIDEFYLQPRKIDAAALDREAAVLVEGRK
Ga0307293_102310672	3300028711	Soil	VPAAALVQIVIDEFYLQPRKPDYAALDREAAALVEGKK
Ga0307298_101363432	3300028717	Soil	PAAALVQIVIDEFYLQPRKIDAAALDREAAALVEGRK
Ga0307301_101436731	3300028719	Soil	AVALVQIVIDEFYLQPRKIDAAALDREAAALVEGRK
Ga0307288_103504231	3300028778	Soil	AAALVQIVIDEFYLQPRKIDAAALDREAAALIEGRK
Ga0307323_102590291	3300028787	Soil	AAALVQIVIDEFYLQPRKIDAAALDREAAALVEGRK
Ga0307312_105473061	3300028828	Soil	PAAALVQIVIDEFYLQPRKVDYAALHREAAALVEGKRSAL
Ga0307312_108675721	3300028828	Soil	PAAALVQIVIDEFYLQPRKPNYAALDREAAALVDGK
Ga0075388_115811331	3300030848	Soil	FLAVPAAALVQIVIDEFYLQPRKIDAAALDREAAALVEGRK
Ga0308187_104068102	3300031114	Soil	AVPAAALVQIVIDEFYLQPRKLDYAGFDREAAVLVEGKK
Ga0170824_1265163111	3300031231	Forest Soil	AVPAAALVQIVIDEFYLQPRKPDYTALDREAAALVEGKKYGL
Ga0170820_162375173	3300031446	Forest Soil	LGVFIAVPAAALVQIVIDEFYLQPRKPDYAALNKEAAALVEGKK
Ga0170819_142164063	3300031469	Forest Soil	VPAAALVQIVIDEFYLQPRKPDYAALDREAAALVEGKKYGL
Ga0310886_109719881	3300031562	Soil	LFLAVPAAALVQIVIDEFYLQPRKIDARALDQDAAVLVEGRK
Ga0307473_113399051	3300031820	Hardwood Forest Soil	PAAALVQIVIDEFYLRPRKPDYTAIDREAAALVEGKN
Ga0310917_107363611	3300031833	Soil	GVFLAVPAAALAQIVIDEFYLQPRKLNHAALDKEAAALVEGTK
Ga0307471_1018608301	3300032180	Hardwood Forest Soil	LGVFLAVPAAALVQIVIDEFYLQPRKVDYAALDREAAALVEGKT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041468

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences