Metagenome / Metatranscriptome Family F041475

Basic Information
Family ID	F041475
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	51 residues
Representative Sequence	VKQGDKYVLKDDSGKTYDIDHQSDVAKFEGKRVRVQGTLDPSGKIMVK
Number of Associated Samples	126
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	50.00 %
% of genes near scaffold ends (potentially truncated)	0.62 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Most Common Taxonomy
Group	Unclassified (97.500 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.250 % of family members)
Environment Ontology (ENVO)	Unclassified (21.875 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.375 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.58% β-sheet: 18.42% Coil/Unstructured: 75.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF00903	Glyoxalase	10.00
PF06172	Cupin_5	7.50
PF00581	Rhodanese	6.25
PF02881	SRP54_N	4.38
PF12681	Glyoxalase_2	3.75
PF00275	EPSP_synthase	2.50
PF02687	FtsX	1.88
PF03726	PNPase	1.25
PF04193	PQ-loop	1.25
PF01957	NfeD	1.25
PF06574	FAD_syn	1.25
PF14310	Fn3-like	1.25
PF13561	adh_short_C2	0.62
PF00488	MutS_V	0.62
PF00383	dCMP_cyt_deam_1	0.62
PF01209	Ubie_methyltran	0.62
PF01687	Flavokinase	0.62
PF02780	Transketolase_C	0.62
PF02321	OEP	0.62
PF10282	Lactonase	0.62
PF01553	Acyltransferase	0.62
PF00069	Pkinase	0.62
PF00753	Lactamase_B	0.62
PF12704	MacB_PCD	0.62
PF03725	RNase_PH_C	0.62
PF00575	S1	0.62
PF00782	DSPc	0.62
PF11731	Cdd1	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG3542	Predicted sugar epimerase, cupin superfamily	General function prediction only [R]	7.50
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.50
COG0196	FAD synthase	Coenzyme transport and metabolism [H]	1.88
COG1185	Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	Translation, ribosomal structure and biogenesis [J]	1.88
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.25
COG0249	DNA mismatch repair ATPase MutS	Replication, recombination and repair [L]	0.62
COG0689	Ribonuclease PH	Translation, ribosomal structure and biogenesis [J]	0.62
COG1193	dsDNA-specific endonuclease/ATPase MutS2	Replication, recombination and repair [L]	0.62
COG2123	Exosome complex RNA-binding protein Rrp42, RNase PH superfamily	Intracellular trafficking, secretion, and vesicular transport [U]	0.62
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.62
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.62

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.50 %
All Organisms	root	All Organisms	2.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.50 %
cellular organisms	root	All Organisms → cellular organisms	2.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.50 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.50 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.50 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.50 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.50 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.50 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.62 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005537\|Ga0070730_10000844	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	32404	Open in IMG/M
3300021559\|Ga0210409_10010104	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	9517	Open in IMG/M
3300026334\|Ga0209377_1042084	All Organisms → cellular organisms → Bacteria → Acidobacteria	2094	Open in IMG/M
3300027857\|Ga0209166_10000675	All Organisms → cellular organisms → Bacteria → Acidobacteria	34103	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.50%
Host-Associated	Host-Associated	7.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.88%
Plants	Host-Associated → Plants	7.50%
Aquatic	Environmental → Aquatic	5.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.50%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.75%
Sediment	Environmental → Aquatic → Sediment	1.25%
Peat	Environmental → Terrestrial → Peat	1.25%
Freshwater	Environmental → Aquatic → Freshwater	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.38%
Loam	Environmental → Terrestrial → Soil → Loam	13.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.50%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.25%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.25%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.25%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.25%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.25%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.25%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.62%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.62%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.62%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.25%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	11.25%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.12%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.75%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.88%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.25%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.25%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.62%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.62%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.62%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.62%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.62%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003308	Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_20 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003735	Avena fatua rhizosphere microbial communities - H4_Bulk_Litter_23 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005875	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010081	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010112	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021315	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_2_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026003	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201 (SPAdes)	Environmental	Open in IMG/M
3300026025	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1027813641	3300000955	Soil	AGTQTFSGTVTKQGDKYVLKDDSGKTYDIDHQDEVKKFDGKRVRVQGTLDPATNKIMVK*
JGIcombinedJ26739_1000951711	3300002245	Forest Soil	ASGAATASDGQSFSGTVVKSGDKYMLKDDSGKTYDIDHQSDVAKFEGKRVRVQGKLDDSGSKILVK*
Ga0006777J48905_10080912	3300003308	Avena Fatua Rhizosphere	VKQGDKYVLKDDTGKTYDIDHQTDVARFEGKRVRVQGTLDPNGKILVK*
Ga0006777J48905_10159792	3300003308	Avena Fatua Rhizosphere	VLKDDSGKTYDIDHQDEVKKFDGKRVRVQGTLDPSSNRIMVK*
Ga0006780_10015932	3300003735	Avena Fatua Rhizosphere	VKQGDKYVLKDDTGKTYDIDHQTDVARFEGKRVRVQGTLDPNGKIL
Ga0063454_1003023282	3300004081	Soil	VKQGDKYVLKDDTGKTYDIDHQTDVARFEGKRVRVQGTLDPSGKILVK*
Ga0062595_1005685461	3300004479	Soil	SAADQSAASAGGTQTFSGTVTKQGDKYVLKDDSGKTYDIDHQDEVKKFDGKRVRVQGTLDPATNKIMVK*
Ga0066684_106291452	3300005179	Soil	AADNANGSQTFSGTVVKQGDKYVLKDEAGKTYDIDHQSDVAKFEGKRVRVQGTLDSNGKILVK*
Ga0066671_110475991	3300005184	Soil	DKYVLKDEAGKTYDIDHQSDVAKFEGKRVRVQGTLDSNGKILVK*
Ga0070714_1017218491	3300005435	Agricultural Soil	AQKPSDSAATGTDSQTFSGTVVKQGDKYMLKDDSGHVYDIDHQDEVKKFDGKRVRVQGTLDPTGNKIMVK*
Ga0070713_1010705531	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VKQGDKYVLQDDSGKTYDIDHQDEVKKFEGKRVRVQGKLDDSGKKIMVK*
Ga0070694_1010056951	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VVKQGDKYVLKDDAGKTYDIDHQTDVAKFEGKRVRVQGTLDPSGKILVK*
Ga0070741_100213592	3300005529	Surface Soil	VKQGDKYVLKDETGKTYDIDHQSDVAKFEGKRVRVQGTLDSNGKILVK*
Ga0070734_105617432	3300005533	Surface Soil	VLKDDAGHTYDIDHQDEVKKFEGKRVRVQGTLDPATNKIMVK*
Ga0070730_1000084425	3300005537	Surface Soil	VLKDDSGKTYDIDHQTDVAKFEGKRVRVQGTLDPSGKIMVK*
Ga0070730_100456785	3300005537	Surface Soil	VKQGDKYVLKDDSGKTYDIDHQSDVAKFEGKRVRVQGTLDPSGKIMVK*
Ga0070731_100365384	3300005538	Surface Soil	VKSGDKYMLKTDSGKTYDIDHQDDVMKFDGKRVKVQGKLDDTGTKILVK*
Ga0070732_103804312	3300005542	Surface Soil	QVFTGTVEKQGDKYVLKDDAGKTYDIDHQTDVAKFEGKRVRVQGTLDETGKKINVK*
Ga0070732_104141222	3300005542	Surface Soil	DDSGKTYDIDHQSDVAKFEGKRVRVKGVLDASGTKILVK*
Ga0070732_105313971	3300005542	Surface Soil	FSGTVTKQGDKYVLKDDSGHTYDIDHQDEVKKFDGKKVRVQGTLDPSGNKILVK*
Ga0070732_105936482	3300005542	Surface Soil	TGAASDSQSFSGTVQKAGDKYVLKDDSGKTYDIDHQAEVAKFEGKRVRVKGTLDASGTKIMVK*
Ga0070732_106081372	3300005542	Surface Soil	GASDNGAAATSADSQSFSGTVVKQGDKYMLKDDSGKTYDIDHQTDVAKFEGKRVRVKGSLDSTGTKIMVK*
Ga0066670_102695101	3300005560	Soil	VKQGDKYVLKDDAGKTYDIDHQTDVAKFEGKRVRVQGTLDPSGKIMVK*
Ga0070762_100205193	3300005602	Soil	MPDSSATAGGSQTFSGTIVKSGDKYVLKDDSGKTYDIDHQTDVAKFEGKRVRVQGSLDSTGTKIQVK*
Ga0070763_102363222	3300005610	Soil	KYVLKDDTGHVYDIDHQTDVAKFDGKRVRVQGTLDPSGKKIMVK*
Ga0066903_1054093171	3300005764	Tropical Forest Soil	QTFSGTVTKQGDKYVLKDDSGKTYDIDHQDEVKKFDGKRVRVQGTLDPATNKIMVK*
Ga0075293_10175112	3300005875	Rice Paddy Soil	VLKDDTGKTYDIDHQTDVARFEGKRVRVQGTLDPNGKILVK*
Ga0070717_100191272	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPAAGTSATGTAADSQNFSGTVVKSGDKYMLKDDSGKTYDIDHQSDVAKFEGKRVRVKGVLDASGTKILVK*
Ga0070717_103600061	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GTPDATGAASDSQSFSGTVQKAGDKYVLKDDSGKTYDIDHQAEVAKFEGKRVRVKGTLDASGTKIMVK*
Ga0075028_1009661482	3300006050	Watersheds	PDKTAPSAAAPSATDTQSFSGTVVKSGDKYMLKDDAGKTYDIDHQDEVKKFEGKRVKVQGTLDATGTKITVK*
Ga0070715_101047374	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	KSGDKYVLKDDSGKTYDIDHQDEVKKFDGKRVRVKGKLDDTGTKIQVQ*
Ga0079220_101061531	3300006806	Agricultural Soil	VAKQGDKYVLKDDSGHVYDIDHQDEVKKFDGKRVRVQGTLDPGGNKILVK*
Ga0073928_100170932	3300006893	Iron-Sulfur Acid Spring	MLKDDSGKMYDIDHQTDVSKFDGKRVRVKGTLDASGTKILVK*
Ga0073928_100355383	3300006893	Iron-Sulfur Acid Spring	VKSGDKYMLKDDAGKTYDIDHQSDVAKFEGKRVRVQGKLDDSGSKILVK*
Ga0075426_101382003	3300006903	Populus Rhizosphere	SASQSGSSAADQSAASAGGTQTFSGTVTKQGDKYVLKDDSGKTYDIDHQDEVKKFDGKRVRVQGTLDPATNKIMVK*
Ga0102924_10318781	3300007982	Iron-Sulfur Acid Spring	GAAASNPDGSQTFSGTVVKQGDKYVLKDDAGKTYDIDHQTDVAKFEGKRVRVQGTLDPSGKIMVK*
Ga0102924_12086991	3300007982	Iron-Sulfur Acid Spring	KTYDIDHQTDVAKFEGKRVRVQGTLDPSGKIMVK*
Ga0105237_117148351	3300009545	Corn Rhizosphere	GKTYDIDHQTDVAKFEGKRVRVQGTLDPSGKIMVK*
Ga0105237_117736441	3300009545	Corn Rhizosphere	VKQGDKYVLKDDAGKTYDIDHQTDVAKFEGKRVRVQGTLDPSGKI
Ga0126380_114841381	3300010043	Tropical Forest Soil	SGSKDDSSRAPTDTQTFSGTVVKQDNKYMLKEDSGKMYDIDHQSDVAKFEGKRVRVQGTLDANGKILVK*
Ga0126373_112497191	3300010048	Tropical Forest Soil	PSGSSADSGAAAGTQTFSGTVTKQGDKYVLKDDTGKTYDIDHQDEVKKFEGKRVRVQGTLDPATNKIMVK*
Ga0127457_10104302	3300010081	Grasslands Soil	VLKDDSGKTYDIDHQDEVKKFDGKRVRVQGTLDPSTNK
Ga0127458_10902641	3300010112	Grasslands Soil	MKSGDKYVLKTDTGKTYDIDHQDDVKKFDGKRVRVQGTLDPSTNKIMVK*
Ga0126370_107067922	3300010358	Tropical Forest Soil	QDNKYMLKEDSGKMYDIDHQSDVAKFEGKRVRVQGTLDANGKILVK*
Ga0126370_116599492	3300010358	Tropical Forest Soil	VKQGDKYVLKDDAGKTYDIDHQSDVAKFEGKRVRVQGTLDPSGKIMVK*
Ga0126378_104831632	3300010361	Tropical Forest Soil	VLKDDSGHVYDIDHQDEVKKFDGKRVRVQGTLDPSGNKIMVK*
Ga0126378_118294942	3300010361	Tropical Forest Soil	FSGTVVKQDNKYMLKEDSGKMYDIDHQSDVAKFEGKRVRVQGTLDANGKILVK*
Ga0126378_134179971	3300010361	Tropical Forest Soil	SGSSADSGAASGTQTFSGTVAKQGDKYVLKDDSGKTYDIDHQDEVKKFEGKRVRVQGTLDPATNKIMVK*
Ga0126377_119916752	3300010362	Tropical Forest Soil	VTKQGDKYVLKDDSGKTYDIDHQDEVKKFDGKRVRVQGTLDQATNKIMVK*
Ga0126381_1003450442	3300010376	Tropical Forest Soil	VLKDDSGHTYDIDHQDEVKKFEGKRVRVQGTLDPSTNKIMVK*
Ga0126381_1013618691	3300010376	Tropical Forest Soil	GHTYDIDHQDEVKKFEGKRVRVQGTLDPSTNKIMVK*
Ga0126381_1036826091	3300010376	Tropical Forest Soil	GDKYVLKDDTGKTYDIDHQDEVKKFEGKRVRVQGTLDPATNKIMVK*
Ga0126383_114852201	3300010398	Tropical Forest Soil	TFSGTVVKQGDKYVLKDDTGKTYDIDHQTDVAKFEGKRVRVQGTLDPSGNKIMVK*
Ga0137381_102939701	3300012207	Vadose Zone Soil	SGSSAASGDSQTFSGTVSKQGDKYVLKDDSGKTYDIDHQDEVKKFDGKRVRVKGKLDDTGTKIQVQ*
Ga0137370_104440192	3300012285	Vadose Zone Soil	KTYDIDHQDEVKKFDGKKVRVKGKLDDTGTKIQVQ*
Ga0137387_101291073	3300012349	Vadose Zone Soil	DSGKTYDIDHQDEVKKFDGKRVRVKGKLDDTGTKIQVQ*
Ga0137372_102689792	3300012350	Vadose Zone Soil	MPAASDSQTFSGTVMKSGDKYVLKDDSGKTYDIDHQDEVKKFDGKRVRVKGKLDDTGTKIQVQ*
Ga0137390_110228332	3300012363	Vadose Zone Soil	TYDIYHQDDVKKFDGKRVRVQGKLDDTGTKIMVK*
Ga0134057_12936602	3300012396	Grasslands Soil	VKQGDKYVLKDDAGKSYDIDHQTDVAKFEGKRVRVQGTLDPSGKIMVK*
Ga0150984_1096115841	3300012469	Avena Fatua Rhizosphere	MLKDDTGQTYDIDHQTEVAKFDGKRVRVQGTLDPTGKKIMVK*
Ga0150984_1124315771	3300012469	Avena Fatua Rhizosphere	VKQGDKYVLKDEAGKTYDIDHQSDVAKFEGKRVRVQGTLDSNGKILVK*
Ga0150984_1214143922	3300012469	Avena Fatua Rhizosphere	VKQGDKYVLKDDAGKTYDIDHQTDVAKFEGKRVRVQGQLDPSGKIMVK*
Ga0137413_106174863	3300012924	Vadose Zone Soil	GTVVKSGDKYVLQDTDTGNTYDVDHQDEVAKFEGKRVKVKGTLDASGKMIHIQ*
Ga0137407_121840251	3300012930	Vadose Zone Soil	VVKSGDKYVLKDDAGKTYQIDHQDDVKKFEGKRVRVQGTLDPSGTSISVQ*
Ga0137410_114754491	3300012944	Vadose Zone Soil	QPPSGAADSGAAAGTQTFSGTVVKQGDKYMLKDDSGHTYDIDHQDEVKKFEGKRVRVQGTLDASSNKIMVK*
Ga0164298_113319001	3300012955	Soil	SSASDASGAQTFSGTVVKQGDKYVLKDDTGKTYDIDHQTDVARFEGKRVRVQGTLDPNGKILVK*
Ga0164303_110346611	3300012957	Soil	GTVVKQGDKYVLKDDSGHTYDIDHQDEVKKFEGKRVRVQGTLDPSSNKIMVK*
Ga0182024_106954003	3300014501	Permafrost	MLKDDTGKTYDIDHQDDVAKFEGKRVRIQGTLDASGNKILVK*
Ga0167668_10274973	3300015193	Glacier Forefield Soil	MPSATAPNAGASASGAATASDSQSFSGTVEKSGDKYVLKDDSGKTYDIDHQTDVSKFEGKRVRVQGKLDASGSKIMVK*
Ga0182007_104310891	3300015262	Rhizosphere	VLKDDTGKTYDIDHQTDVARFEGKRVRVQGTLDPNG
Ga0137403_107628201	3300015264	Vadose Zone Soil	MLKDDTGKTYDIDHQDEVKKYEGKRVKVQGTLDATGTKITVK*
Ga0182005_11884202	3300015265	Rhizosphere	LKDDAGKTYDIDHQTDVAKFEGKRVRVQGTLDPSGKIMVK*
Ga0187783_106950011	3300017970	Tropical Peatland	AGSESAPTDAQTFSGTVVKQGDKYMLKDDSGKMYDIDHQSDVAKFEGKRVRVQGTLDANGKILVK
Ga0187783_109226311	3300017970	Tropical Peatland	KDDSGKMYDIDHQSDVAKFEGKRVRVQGTLDANGKILVK
Ga0187804_102724942	3300018006	Freshwater Sediment	DDSGKTYDIDHQTDVAKFEGKRVRVQGTLDANGKIMVK
Ga0206350_110591901	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	VKQGDKYVLKDDAGKTYDIDHQTDVAKFEGKRVRVQGTLDPSGKIMVK
Ga0179592_103605571	3300020199	Vadose Zone Soil	PDSKATPSATAPSATDSQSFSGTVVKSGDKYMLKDDTGKTYDIDHQDEVKKYEGKRVKVQGTLDATGTKITVK
Ga0210407_100185342	3300020579	Soil	MPDSSATAGGSQTFSGTIVKSGEKYVLKDDSGKTYDIDHQTDVAKFEGKRVRVQGSLDSTGTKIQVK
Ga0210407_104058721	3300020579	Soil	KTYDIDHQDDVKKFDGKRVKVQGKLDATGTKIQVKE
Ga0210399_107479251	3300020581	Soil	DNSSAAGTDAASTDSQSFSGTVVKSGDKYMLKDDSGKMYDIDHQSDVSKFDGKRVRVKGTLDASGTKILVK
Ga0210401_101897183	3300020583	Soil	DSGKTYDIDHQDDVKKFDGKRVKVQGKLDETGTKIMVK
Ga0210400_106884152	3300021170	Soil	GKTYDIDHQSDVAKFEGKRVRVQGKLDDTGTKIMVK
Ga0210408_109416942	3300021178	Soil	KDDSGKTYDIDHQDDVKKFDGKRVKVQGKLDATGTKIQVKE
Ga0210396_117390901	3300021180	Soil	KTSTPTAAAPTTSDSQTFMGTVMKSGDKYVLKDDSGKTYDIDHQDDVKKFDGKRVKVQGKLDATGTKIQVKE
Ga0179958_10089402	3300021315	Vadose Zone Soil	MLKTDSGKTYDIDHQNDVMKFDGKRVKVQGKLDDTGTKILV
Ga0210393_1000076027	3300021401	Soil	SGKTYDIDHQDDVKKFDGKRVKVQGKLDETGTKIMVK
Ga0210393_103473122	3300021401	Soil	KYVLKDDSGKTYDIDHQTDVAKFEGKRVRVQGSLDSTGTKIQVK
Ga0210397_103926631	3300021403	Soil	MPDSSATAGGSQTFSGTIVKSGDKYVLKDDSGKTYDIDHQTDVAKFEGKRVRVQGSLDSTGTKIQVK
Ga0210389_110352571	3300021404	Soil	HVYDIDHQTDVAKFDGKRVRVQGTLDPSGKKIMVK
Ga0210389_112505082	3300021404	Soil	TVMKSGDKYVLKDDSGKTYDIDHQDDVKKFDGKRVKVQGKLDATGTKIQVKE
Ga0210383_115240161	3300021407	Soil	ATAGASDSQSFSGTVVKSGDKYILKDDSGKTYDIDHQDDVKKFEGKRVKVQGKLDDTGTKILVK
Ga0210394_109377632	3300021420	Soil	PTAAAPTASDSQTFMGTVMKSGDKYVLKDDSGKTYDIDHQDDVKKFDGKRVKVQGKLDATGTKIQVKE
Ga0210384_118762371	3300021432	Soil	FSGMVEKSGDKYVLKDDSGKTYDIDHQDDVKKFEGKRVKVQGTLDPTGTKIQVK
Ga0210391_103776702	3300021433	Soil	EATFSGTIVKSGDKYVLKDDSGKTYDIDHQTDVAKFEGKRVRVQGSLDSTGTKIQVK
Ga0182009_100213244	3300021445	Soil	GAQTFSGTVVKQGDKYVLKDDTGKTYDIDHQTDVARFEGKRVRVQGTLDPNGKILVK
Ga0210390_104736971	3300021474	Soil	DKYQLKDDSGKTYDIDHQDDVKKFDGKRVKVQGKLDETGTKIMVK
Ga0210390_107387252	3300021474	Soil	GHVHDIDHQTDVAKFDGKRVRVQGTLDPSGKKIMVK
Ga0210390_111264792	3300021474	Soil	QPSTTPSAADSQVFSGTVQKSGDKYVLKTDSGKTYDIDHQDDVKKFDGKRVRVQGKLDDSGTKILVK
Ga0210392_109954082	3300021475	Soil	TDTQTFSGTVVKSGDKYMLKTDSGKTYDIDHQDDVMKFDGKRVKVQGKLDDTGTKILVK
Ga0210409_100101042	3300021559	Soil	VKQGDKYVLKDDSGKTYDIDHQDEVKKFEGKRVRVQGTLDPSTNKIMVK
Ga0212123_100630546	3300022557	Iron-Sulfur Acid Spring	FSGTVVKQGDKYVLKDDAGKTYDIDHQTDVAKFEGKRVRVQGTLDPSGKIMVK
Ga0212123_103644602	3300022557	Iron-Sulfur Acid Spring	VLKDDAGKTYDIDHQDEVKKFDGKRVRVQGTLDPSGSKIMVK
Ga0207930_11382921	3300025604	Arctic Peat Soil	KYMLKDDSGKTYDIDRQDDVKKFEGKRVRVQGKLDDTGTKITVK
Ga0207685_100820774	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VKSGDKYVLKDDSGKTYDIDHQDEVKKFDGKRVRVKGKLDDTGTKIQVQ
Ga0207695_103125234	3300025913	Corn Rhizosphere	AGKTYDTDHQTDVAKFEGKRVRVQGTLDPSGKIMVK
Ga0207700_109164132	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VVKQGDKYVLQDDSGKTYDIDHQDEVKKFEGKRVRVQGKLDDSGKKIMVK
Ga0207700_109369221	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LKDDAGKTYDIDHQTDVAKFEGKRVRVQGTLDPSGKIMVK
Ga0207665_109821142	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	GDKYMLKDDAGKTYDIDHQDEVKKYEGKRVKVQGTLDATGTKITVK
Ga0208284_10077461	3300026003	Rice Paddy Soil	VLKDDTGKTYDIDHQTDVARFEGKRVRVQGTLDPNGKILVK
Ga0208778_10270242	3300026025	Rice Paddy Soil	KDDTGKTYDIDHQTDVARFEGKRVRVQGTLDPNGKILVK
Ga0209890_101065181	3300026291	Soil	AGDSQVFSGTVEKSGDKYVLKTDSGKTYDIDHQDDVKKFEGKKVRVQGKLDETGTKIQVK
Ga0209377_10420841	3300026334	Soil	KDDSGKIYDIDHQDEVKKFEGKRVRVQGTLDPSTNKIMVK
Ga0257155_10641181	3300026481	Soil	SAGMPTASDTQTFNGTVVKSGDKYMLKTDSGKTYDIDHQDDVKKFDGKRVKVQGKLDDTGTKILVK
Ga0209807_10881751	3300026530	Soil	VKQGDKYVLKDDAGKTYDIDHQSDVAKFEGKRVRVQGTLDSNGKIMVK
Ga0207777_10584632	3300027330	Tropical Forest Soil	TVVKSGDKYVLKDDSGKTYDIDHQDQVKKFEGKKVRVQGTLDETGSKIKVQQ
Ga0209529_10236931	3300027334	Forest Soil	TAGGSQTFSGTIVKSGDKYLLKDDSGKTYDIDHQTDVAKFEGKRVRVQGSLDSTGTKIQV
Ga0209525_11148822	3300027575	Forest Soil	SGDKYMLKDDSGKTYDIDHQSDVAKFEGKRVRVQGKLDDSGSKILVK
Ga0209420_10046846	3300027648	Forest Soil	MLKDDSGKMYDIDHQSDVSKFDGKRVRVKGTLDASGTKILVK
Ga0209073_104526731	3300027765	Agricultural Soil	VAKQGDKYVLKDDSGHVYDIDHQDEVKKFDGKRVRVQGTLDPGGNKILVK
Ga0209580_102924382	3300027842	Surface Soil	DDAGKTYDIDHQTDVAKFEGKRVRVQGTLDPSGKIMVK
Ga0209580_102993462	3300027842	Surface Soil	KDDSGKTYDIDHQDEVKKFEGKRVRVQGTLDASTNKIMVK
Ga0209580_104740811	3300027842	Surface Soil	AGASDNGAAATSADSQSFSGTVVKQGDKYMLKDDSGKTYDIDHQTDVAKFEGKRVRVKGSLDSTGTKIMVK
Ga0209693_100245561	3300027855	Soil	GSQTFSGTIVKSGDKYVLKDDSGKTYDIDHQTDVAKFEGKRVRVQGSLDSTGTKIQVK
Ga0209693_101501972	3300027855	Soil	KYVLKDDTGHVYDIDHQTDVAKFDGKRVRVQGTLDPSGKKIMVK
Ga0209166_1000067510	3300027857	Surface Soil	VLKDDSGKTYDIDHQTDVAKFEGKRVRVQGTLDPSGKIMVK
Ga0209166_100097044	3300027857	Surface Soil	VKQGDKYVLKDDSGKTYDIDHQSDVAKFEGKRVRVQGTLDPSGKIMVK
Ga0209167_100421282	3300027867	Surface Soil	VLKDDAGKTYDIDHQSDVAKFEGKRVRVQGTLDPSGKIMVK
Ga0209579_100249903	3300027869	Surface Soil	VKSGDKYMLKTDSGKTYDIDHQDDVMKFDGKRVKVQGKLDDTGTKILVK
Ga0209579_106201612	3300027869	Surface Soil	MLKDDSGKMYDIDHQTDVAKFDGKRVRVQGTLDANGKILVK
Ga0209067_102729401	3300027898	Watersheds	LKTDSGKTYDIDHQDDVKKFEGKRVRVQGKLDETGTKILVK
Ga0209488_103064952	3300027903	Vadose Zone Soil	SATAPSATDSQSFSGTVVKSGDKYMLKDDTGKTYDIDHQDEVKKYEGKRVKVQGTLDATGTKITVK
Ga0209006_103183463	3300027908	Forest Soil	KTYDIDHQSDVAKFEGKRVRVQGKLDDSGSKILVK
Ga0311353_115469081	3300030399	Palsa	YMLKDDSGQTYDIDHQNEVAKFEGKHIRVHGTLDANGAIQLK
Ga0170824_1174959692	3300031231	Forest Soil	ETFSGTVVKQGSKYVLKDDSGKTYDIDHQTDVAKFEGKRVRVQGTLDPSGNKIMVK
Ga0318528_102272252	3300031561	Soil	VKSGDKYVLQDESTGKTYDIDHQRDVSKHVNRRVRVDGTLDPSVSMIHIQ
Ga0307476_110417562	3300031715	Hardwood Forest Soil	SAAGTDAAGGDSQSFSGTVVKSGDKYMLKDDSGKMYDIDHQSDVSKFDGKRVRVKGTLDASGTKILVK
Ga0310813_119313702	3300031716	Soil	SGKTYDIDHQDEVKKFDGKRVRVQGTLDASTNKIMVK
Ga0307474_115279391	3300031718	Hardwood Forest Soil	ASDTQTFSGTVTKQGDKYVLKDDSGHTYDIDHQGEVKKFDGKKVRVQGTLDPSGNKILVK
Ga0310917_103677162	3300031833	Soil	TFSGTVAKQGDKYVLKDDSGKTYDIDHQDEVKKFEGKRVRVQGTLDPATNKIMVK
Ga0306921_106899871	3300031912	Soil	KYVLKDDSGKTYDIDHQDEVKKFEGKRVRVQGTLDPATNKIMVK
Ga0306921_113134862	3300031912	Soil	TDNQSFSGTVVKQGDKYVLKDDSGKTYDIDHQTDVAKFEGKRVRVQGTLDSTGTKIMVK
Ga0308175_1001054155	3300031938	Soil	TVVKQGDKYVLKDDTGKTYDIDHQTDVARFEGKRVRVQGTLDPNGKIMVK
Ga0310913_105555942	3300031945	Soil	AGTQTFSGTVTKQGDKYVLKDDSGHTYDIDHQDEVKKFEGKRVRVQGTLDPGTNKIMVK
Ga0306922_101402431	3300032001	Soil	VKQGDKYVLKDDSGKTYDIDHQTDVAKFEGKRVRVQGTLDSTGTKIMVK
Ga0318533_110620422	3300032059	Soil	DDSGKTYDIDHQDEVKKFEGKRVRVQGTLDPATNKIMVK
Ga0307470_105338452	3300032174	Hardwood Forest Soil	TVVKQGDKYVLKDDSGKTYDIDHQDEVKKFEGKRVRVQGTLDPSTNKIMVK
Ga0335085_107222691	3300032770	Soil	TGKTYDIDHQDEVKKFDGKRVRVQGTLDPATNKIMVK
Ga0335079_105986891	3300032783	Soil	VLKDDSGHSYDIDHQDEVKKFEGKRVRVQGTLDASSNKIMVK
Ga0335078_103196773	3300032805	Soil	GTVVKQGDKYVLKDDSGKTYDIDHQTDVAKFEGKRVRVQGTLDPSGKILVK
Ga0335078_111066392	3300032805	Soil	DSGKTYDIDHQSDVAKFEGKRVRVQGTLDPSGKILVK
Ga0335078_126870781	3300032805	Soil	MFSGTVEKQGNKYVLKDDSGKTYDIDHQTDVAKFEGKRVRVQGTLDPSGTKILVK
Ga0335070_111355001	3300032829	Soil	AGTQTFSGTVTKQGDKYVLKDDSGHTYDIDHQDEVKKFDGKRVRVQGTLDPATNKIMVK
Ga0335081_117062871	3300032892	Soil	VVKQGDKYVLRDDSGQTYDIDHQTEVSKFDGKRVRVQGTLDPTGKKIMVK
Ga0335069_103095864	3300032893	Soil	AGSSSTGSSASGSTGANGSQVFSGTVEKQGDKYVLKDDSGKTYDIDHQTDVAKFEGKRVRVQGTLDASGNKIMVK
Ga0335072_101344883	3300032898	Soil	MKQGNKYVLQDASGKSYDIDHQPEVAKFEGKRVRVRGTLDQTGNKIMVK
Ga0335072_106779862	3300032898	Soil	KYVLKDDAGKTYDIDHQNDVAKFEGKRVRVQGTLDANGKIMVK
Ga0335076_100287375	3300032955	Soil	VEKQGDKYVLKDDAGKTYDIDHQTDVAKFEGKRVRVQGTLDASGSKIMVK
Ga0335084_107973031	3300033004	Soil	QTFSGTVTKQGDKYVLKDDSGKTYDIDHQDEVKKFDGKRVRVQGTLDPATNKIMVK
Ga0335073_119107752	3300033134	Soil	SGSQTFSGTVTKQGDKYVLKDDSGKTYDIDHQDEVKKFDGKRVRVQGTLDPATNKIMVK
Ga0334790_001219_99_227	3300033887	Soil	MLKDDSGKMWDIDHQTDVAKFEGKRVRVKGTLDASGTKIMVQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041475

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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