Metagenome Family F041669

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F041669
Family Type	Metagenome
Number of Sequences	159
Average Sequence Length	54 residues
Representative Sequence	MSDRAWQHPWLRIQRLIRSILEVRRDEVTRPVMKVTLRDALKEREKIRRAGWWN
Number of Associated Samples	95
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	47.17 %
% of genes near scaffold ends (potentially truncated)	33.96 %
% of genes from short scaffolds (< 2000 bps)	83.65 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (82.390 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (33.962 % of family members)
Environment Ontology (ENVO)	Unclassified (72.327 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (77.987 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.90% β-sheet: 0.00% Coil/Unstructured: 56.10%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF04392	ABC_sub_bind	6.92
PF00903	Glyoxalase	4.40
PF08031	BBE	3.77
PF00496	SBP_bac_5	3.14
PF07992	Pyr_redox_2	2.52
PF01842	ACT	2.52
PF00072	Response_reg	1.89
PF00528	BPD_transp_1	1.89
PF09992	NAGPA	1.26
PF01223	Endonuclease_NS	1.26
PF08309	LVIVD	1.26
PF07585	BBP7	1.26
PF07969	Amidohydro_3	1.26
PF00027	cNMP_binding	0.63
PF07238	PilZ	0.63
PF02954	HTH_8	0.63
PF00872	Transposase_mut	0.63
PF13414	TPR_11	0.63
PF13436	Gly-zipper_OmpA	0.63
PF14311	DUF4379	0.63
PF01695	IstB_IS21	0.63
PF04909	Amidohydro_2	0.63
PF13229	Beta_helix	0.63
PF00082	Peptidase_S8	0.63
PF00326	Peptidase_S9	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	6.92
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	3.77
COG1864	DNA/RNA endonuclease G, NUC1	Nucleotide transport and metabolism [F]	1.26
COG5276	Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domain	Function unknown [S]	1.26
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.63
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.39 %
Unclassified	root	N/A	17.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.39 %
Unclassified	root	N/A	17.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.39 %
Unclassified	root	N/A	17.61 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	44.65 %
Unclassified	root	N/A	17.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.26 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.63 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	44.65 %
Unclassified	root	N/A	17.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.66 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.26 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.26 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.63 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	44.65 %
Unclassified	root	N/A	17.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.77 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.26 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.63 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.63 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	38.99 %
Unclassified	root	N/A	17.61 %
Stappiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae	2.52 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.26 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.63 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.63 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	37.74 %
Unclassified	root	N/A	17.61 %
Stappia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Stappia	2.52 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.26 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.63 %
Candidatus Rokubacteria bacterium 13_1_40CM_68_15	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_68_15	0.63 %
Candidatus Rokubacteria bacterium CSP1-6	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium CSP1-6	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	37.74 %
Unclassified	root	N/A	17.61 %
unclassified Stappia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Stappia → unclassified Stappia	2.52 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.26 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.63 %
Candidatus Rokubacteria bacterium 13_1_40CM_68_15	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_68_15	0.63 %
Candidatus Rokubacteria bacterium CSP1-6	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium CSP1-6	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	37.74 %
Unclassified	root	N/A	17.61 %
Stappia sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Stappia → unclassified Stappia → Stappia sp.	2.52 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.26 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.63 %
Candidatus Rokubacteria bacterium 13_1_40CM_68_15	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_68_15	0.63 %
Candidatus Rokubacteria bacterium CSP1-6	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium CSP1-6	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.63 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10010182	All Organisms → cellular organisms → Bacteria	3353	Open in IMG/M
3300002558\|JGI25385J37094_10029740	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1929	Open in IMG/M
3300002561\|JGI25384J37096_10004086	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5252	Open in IMG/M
3300002561\|JGI25384J37096_10036079	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1924	Open in IMG/M
3300002561\|JGI25384J37096_10183992	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	625	Open in IMG/M
3300002562\|JGI25382J37095_10031960	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2062	Open in IMG/M
3300002562\|JGI25382J37095_10050497	All Organisms → cellular organisms → Bacteria	1601	Open in IMG/M
3300002562\|JGI25382J37095_10161842	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	713	Open in IMG/M
3300002908\|JGI25382J43887_10008281	All Organisms → cellular organisms → Bacteria → Proteobacteria	5162	Open in IMG/M
3300002908\|JGI25382J43887_10125784	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300002908\|JGI25382J43887_10282430	Not Available	741	Open in IMG/M
3300002909\|JGI25388J43891_1079705	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	505	Open in IMG/M
3300002912\|JGI25386J43895_10037886	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1411	Open in IMG/M
3300002912\|JGI25386J43895_10047916	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1234	Open in IMG/M
3300005166\|Ga0066674_10008405	All Organisms → cellular organisms → Bacteria	4187	Open in IMG/M
3300005167\|Ga0066672_10352428	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	961	Open in IMG/M
3300005172\|Ga0066683_10113434	Not Available	1650	Open in IMG/M
3300005174\|Ga0066680_10547045	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	727	Open in IMG/M
3300005174\|Ga0066680_10616162	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium CSP1-6	677	Open in IMG/M
3300005174\|Ga0066680_10634212	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300005175\|Ga0066673_10054962	All Organisms → cellular organisms → Bacteria	2021	Open in IMG/M
3300005177\|Ga0066690_10180977	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300005177\|Ga0066690_10705403	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	667	Open in IMG/M
3300005178\|Ga0066688_10248757	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1138	Open in IMG/M
3300005180\|Ga0066685_10009734	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5321	Open in IMG/M
3300005180\|Ga0066685_10237554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Stappia → unclassified Stappia → Stappia sp.	1255	Open in IMG/M
3300005180\|Ga0066685_11150871	Not Available	505	Open in IMG/M
3300005186\|Ga0066676_10756734	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	660	Open in IMG/M
3300005187\|Ga0066675_10028034	All Organisms → cellular organisms → Bacteria	3269	Open in IMG/M
3300005187\|Ga0066675_10123396	All Organisms → cellular organisms → Bacteria	1745	Open in IMG/M
3300005446\|Ga0066686_10275255	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1140	Open in IMG/M
3300005446\|Ga0066686_10323116	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1051	Open in IMG/M
3300005447\|Ga0066689_10074176	Not Available	1893	Open in IMG/M
3300005447\|Ga0066689_10698195	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005540\|Ga0066697_10719057	Not Available	545	Open in IMG/M
3300005552\|Ga0066701_10486657	Not Available	765	Open in IMG/M
3300005552\|Ga0066701_10781604	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300005552\|Ga0066701_10954936	Not Available	507	Open in IMG/M
3300005555\|Ga0066692_10073925	All Organisms → cellular organisms → Bacteria	1961	Open in IMG/M
3300005555\|Ga0066692_10252176	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300005556\|Ga0066707_10170525	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1390	Open in IMG/M
3300005557\|Ga0066704_10198467	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1356	Open in IMG/M
3300005574\|Ga0066694_10305923	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300005574\|Ga0066694_10614433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	507	Open in IMG/M
3300005586\|Ga0066691_10076607	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1843	Open in IMG/M
3300005586\|Ga0066691_10404404	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	812	Open in IMG/M
3300005598\|Ga0066706_10557140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Stappia → unclassified Stappia → Stappia sp.	911	Open in IMG/M
3300005598\|Ga0066706_10902397	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005713\|Ga0066905_100213175	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1454	Open in IMG/M
3300006034\|Ga0066656_10958425	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300006794\|Ga0066658_10936995	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	501	Open in IMG/M
3300006796\|Ga0066665_10549711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	939	Open in IMG/M
3300006796\|Ga0066665_11209549	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	577	Open in IMG/M
3300006796\|Ga0066665_11320029	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	554	Open in IMG/M
3300006796\|Ga0066665_11561690	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	518	Open in IMG/M
3300006797\|Ga0066659_10536088	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300006797\|Ga0066659_11432392	Not Available	577	Open in IMG/M
3300006797\|Ga0066659_11603098	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	547	Open in IMG/M
3300006854\|Ga0075425_100707164	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300006854\|Ga0075425_101767125	All Organisms → cellular organisms → Bacteria → Proteobacteria	695	Open in IMG/M
3300006903\|Ga0075426_10604228	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	819	Open in IMG/M
3300006904\|Ga0075424_101355351	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	756	Open in IMG/M
3300007255\|Ga0099791_10113078	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300007255\|Ga0099791_10310953	Not Available	752	Open in IMG/M
3300009012\|Ga0066710_100306488	All Organisms → cellular organisms → Bacteria	2329	Open in IMG/M
3300009012\|Ga0066710_101515490	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300009012\|Ga0066710_101548080	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1020	Open in IMG/M
3300009012\|Ga0066710_102356859	Not Available	773	Open in IMG/M
3300009012\|Ga0066710_103274025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	620	Open in IMG/M
3300009090\|Ga0099827_10720685	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300009137\|Ga0066709_100183565	Not Available	2726	Open in IMG/M
3300009137\|Ga0066709_100447320	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300009137\|Ga0066709_100492029	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1725	Open in IMG/M
3300009137\|Ga0066709_100618073	All Organisms → cellular organisms → Bacteria	1546	Open in IMG/M
3300009137\|Ga0066709_100696753	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300009137\|Ga0066709_100702873	Not Available	1454	Open in IMG/M
3300009137\|Ga0066709_101544416	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300009137\|Ga0066709_103248469	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	592	Open in IMG/M
3300010046\|Ga0126384_10064671	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2576	Open in IMG/M
3300010047\|Ga0126382_10017637	All Organisms → cellular organisms → Bacteria	3632	Open in IMG/M
3300010047\|Ga0126382_10155558	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1572	Open in IMG/M
3300010301\|Ga0134070_10119121	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	930	Open in IMG/M
3300010320\|Ga0134109_10032718	All Organisms → cellular organisms → Bacteria	1660	Open in IMG/M
3300010322\|Ga0134084_10115085	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	873	Open in IMG/M
3300010325\|Ga0134064_10193532	Not Available	726	Open in IMG/M
3300010329\|Ga0134111_10044656	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1592	Open in IMG/M
3300010333\|Ga0134080_10013124	All Organisms → cellular organisms → Bacteria	2981	Open in IMG/M
3300010333\|Ga0134080_10511980	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	572	Open in IMG/M
3300010336\|Ga0134071_10378988	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	718	Open in IMG/M
3300010336\|Ga0134071_10686858	Not Available	541	Open in IMG/M
3300010337\|Ga0134062_10033573	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2031	Open in IMG/M
3300010359\|Ga0126376_10989054	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_68_15	840	Open in IMG/M
3300010361\|Ga0126378_13194833	Not Available	521	Open in IMG/M
3300012096\|Ga0137389_11280856	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	626	Open in IMG/M
3300012200\|Ga0137382_10487977	Not Available	874	Open in IMG/M
3300012203\|Ga0137399_10342783	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1240	Open in IMG/M
3300012203\|Ga0137399_11038300	Not Available	690	Open in IMG/M
3300012205\|Ga0137362_10031861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4184	Open in IMG/M
3300012205\|Ga0137362_10795790	Not Available	810	Open in IMG/M
3300012205\|Ga0137362_11001341	Not Available	712	Open in IMG/M
3300012206\|Ga0137380_10038684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4399	Open in IMG/M
3300012206\|Ga0137380_10748720	Not Available	846	Open in IMG/M
3300012207\|Ga0137381_10149489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2008	Open in IMG/M
3300012208\|Ga0137376_10005768	All Organisms → cellular organisms → Bacteria	8247	Open in IMG/M
3300012209\|Ga0137379_10901711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	788	Open in IMG/M
3300012210\|Ga0137378_10209507	All Organisms → cellular organisms → Bacteria	1815	Open in IMG/M
3300012211\|Ga0137377_10928717	Not Available	801	Open in IMG/M
3300012349\|Ga0137387_10054066	All Organisms → cellular organisms → Bacteria → Proteobacteria	2687	Open in IMG/M
3300012351\|Ga0137386_10159719	Not Available	1614	Open in IMG/M
3300012351\|Ga0137386_10607242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Stappia → unclassified Stappia → Stappia sp.	787	Open in IMG/M
3300012359\|Ga0137385_10736197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300012362\|Ga0137361_10539773	Not Available	1070	Open in IMG/M
3300012362\|Ga0137361_10671373	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	948	Open in IMG/M
3300012362\|Ga0137361_11732702	Not Available	544	Open in IMG/M
3300012685\|Ga0137397_10829077	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	686	Open in IMG/M
3300012930\|Ga0137407_11117669	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	747	Open in IMG/M
3300012944\|Ga0137410_11159630	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300012948\|Ga0126375_11235529	Not Available	624	Open in IMG/M
3300012972\|Ga0134077_10194738	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	824	Open in IMG/M
3300014154\|Ga0134075_10563000	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	515	Open in IMG/M
3300014166\|Ga0134079_10524156	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	576	Open in IMG/M
3300015358\|Ga0134089_10071437	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1296	Open in IMG/M
3300017656\|Ga0134112_10192975	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300017659\|Ga0134083_10028261	All Organisms → cellular organisms → Bacteria	2029	Open in IMG/M
3300017659\|Ga0134083_10238927	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	758	Open in IMG/M
3300017659\|Ga0134083_10372432	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	618	Open in IMG/M
3300018431\|Ga0066655_10012127	All Organisms → cellular organisms → Bacteria	3779	Open in IMG/M
3300018431\|Ga0066655_10014250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3545	Open in IMG/M
3300018433\|Ga0066667_10212151	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1434	Open in IMG/M
3300018433\|Ga0066667_10569777	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300018433\|Ga0066667_11005247	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	719	Open in IMG/M
3300018468\|Ga0066662_10646566	Not Available	999	Open in IMG/M
3300018468\|Ga0066662_10692352	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	971	Open in IMG/M
3300018468\|Ga0066662_11068206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	804	Open in IMG/M
3300018482\|Ga0066669_10831340	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300018482\|Ga0066669_11642254	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300026277\|Ga0209350_1054789	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1150	Open in IMG/M
3300026297\|Ga0209237_1023148	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3507	Open in IMG/M
3300026297\|Ga0209237_1182428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Stappia → unclassified Stappia → Stappia sp.	720	Open in IMG/M
3300026306\|Ga0209468_1015786	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2752	Open in IMG/M
3300026310\|Ga0209239_1008771	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5485	Open in IMG/M
3300026313\|Ga0209761_1172258	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300026313\|Ga0209761_1327937	Not Available	521	Open in IMG/M
3300026324\|Ga0209470_1346424	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	534	Open in IMG/M
3300026328\|Ga0209802_1233703	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300026333\|Ga0209158_1120225	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	984	Open in IMG/M
3300026334\|Ga0209377_1039502	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2183	Open in IMG/M
3300026334\|Ga0209377_1145004	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	909	Open in IMG/M
3300026334\|Ga0209377_1298457	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300026536\|Ga0209058_1191654	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	866	Open in IMG/M
3300026537\|Ga0209157_1178698	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	924	Open in IMG/M
3300026537\|Ga0209157_1202853	Not Available	835	Open in IMG/M
3300026538\|Ga0209056_10334608	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1010	Open in IMG/M
3300026538\|Ga0209056_10731132	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	502	Open in IMG/M
3300027654\|Ga0209799_1016964	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1588	Open in IMG/M
3300027655\|Ga0209388_1113877	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300027862\|Ga0209701_10279063	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300031720\|Ga0307469_12232968	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	533	Open in IMG/M
3300031820\|Ga0307473_10353747	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	946	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.48%
Host-Associated	Host-Associated	2.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.48%
Plants	Host-Associated → Plants	2.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.52%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.52%
Loam	Environmental → Terrestrial → Soil → Loam	1.89%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	61.01%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.26%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	33.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	27.04%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.24%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	11.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.52%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.26%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.63%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100101822	3300002558	Grasslands Soil	VPRVTDTRWEHPWLRVERLIRSITQQRWHPVTRPLMKETLRDAVREREKIRRAGWMN*
JGI25385J37094_100297401	3300002558	Grasslands Soil	VPRVTDTRWQHLWLRVQRLIRSILEVRRDTITRPVMKATLTKALREREKIRRAGWWN*
JGI25384J37096_100040864	3300002561	Grasslands Soil	VPRVTDTRWQHPWLRVQRLIRSILEVRRDTITRPVMKATLTKALREREKIRRAGWWN*
JGI25384J37096_100360793	3300002561	Grasslands Soil	MTDRALSHPWLRVQRLIRSILEVRRDEVTRPVMKATLTDALGEREKIKRVGWFS*
JGI25384J37096_101839921	3300002561	Grasslands Soil	VPRVTDTRWEHSWLRVERLIRSITQQRWHPVTRPLMKETLRDAVREREKTGAQVG*
JGI25382J37095_100319601	3300002562	Grasslands Soil	MKHDAAGSRRWQPPWLRVQRLIRSITEVRWQGAARPVMKATLTKALRERDKIRRDGWMN*
JGI25382J37095_100504974	3300002562	Grasslands Soil	MNEREQTWQHPWLRLDRLIRSILEVRRDPITRPVMKATLTNALREREKIRRAGWWN*
JGI25382J37095_101618421	3300002562	Grasslands Soil	MPVPDRARHLWHPWLRIQRLIRSILEVRRDPVTRPVMKATLTDALHERERIRRAGWFS*
JGI25382J43887_100082815	3300002908	Grasslands Soil	VTSDRFWYPWLRVQRLMRSILEVRRDEVTRPVMKATLTAALREREKIKRAGWWN*
JGI25382J43887_101257841	3300002908	Grasslands Soil	MNDRAWQHPWLRVQRLIRSILEVRRDPITRPVMKATLTKALRERERSAAPTGGTDL
JGI25382J43887_102824301	3300002908	Grasslands Soil	MSDRAWQHPWLRIQRLIRSILEVRRDPITRPMMKATFREAIKEREKIRRAGWFS*
JGI25388J43891_10797052	3300002909	Grasslands Soil	VPRVTDTRWGTPGFRVERLIRSITQQRWHPVTRPLMKETLRDAVREREKIRRAGWMN*
JGI25386J43895_100378863	3300002912	Grasslands Soil	VTDTRWQHLWLRVQRLIRSILEVRRDTITRPVMKATLTKALREREKIRRAGWWN*
JGI25386J43895_100479161	3300002912	Grasslands Soil	TSDRFWYPWLRVQRLMRSILEVRRDEVTRPVMKATLTAALREREKIKRAGWWN*
Ga0066674_100084056	3300005166	Soil	MNDRAWQHRWLRVQRLIRSILEVRRDEETRPMMKVTMTKALWEREKIRRAGWWN*
Ga0066672_103524281	3300005167	Soil	MNDRADNIWLRVQRLIRSILEVRRDPIARPVMKATLTTALREREDPPRRLVELI*
Ga0066683_101134342	3300005172	Soil	MTDRTWQHPWLRIQRLIRSILEVRRDPVARSVMKTTLVVKEREKIRRAGWMN*
Ga0066680_105470451	3300005174	Soil	MSASGPGNTPPWLRIQRLIRSILDVRRGPATRPVMKATLTKALREREKIRRAGRFS*
Ga0066680_106161621	3300005174	Soil	MERCELVGQQHPWFRVQRLIRSIIDVRWDPMTRPVMKATLKQALEEREKIRRAG
Ga0066680_106342121	3300005174	Soil	LTPSHHPWLRIERLIRSILEVRRDPVTRPVMKATLTKALKEREKIRRAGWMN*
Ga0066673_100549625	3300005175	Soil	VTDTRWQHPWLRVQRLIRSILEVRRDTITRPVMKATLTKARREREKIRRAGWWN*
Ga0066690_101809771	3300005177	Soil	TRWQHLWLRVQRLIRSILEVRRDTITRPVMKATLTKALREREKIRRAGWWN*
Ga0066690_107054032	3300005177	Soil	VIVAGNTPARIQRLIRSILEVHRDPVTRPVMKATLTKALREREKIWRAGWFS*
Ga0066688_102487572	3300005178	Soil	VPRVTDTRWQHLWLRVQRLIRSILEVRRDTITRPVMKATLTKARREREKIRRAGWWN*
Ga0066685_100097341	3300005180	Soil	MTARTDTGDRALWHPWLRIQRLIRSILEVRPDDVTRPLMRATLVDALKEREQIRRAGWMN
Ga0066685_102375542	3300005180	Soil	MTDRALSHPWLRVQRLIRSILEVRRDEVTRPVMKATLTDALREREKIKRVGWFS*
Ga0066685_111508711	3300005180	Soil	VIGARSDDERRWQHPWLRVQRFIRTILAVRRDEVTRPVMKATLVEALREREKIKGAGWMN
Ga0066676_107567342	3300005186	Soil	MMVMADRLWHPWLRIERLIRSILEVRRDPVTRPVLKATLTKALREGEKIRRAGWWN*
Ga0066675_100280344	3300005187	Soil	VPRVTDTRWQHPWLRVQRLIRSILEVRRDTITRPVMKATLTKARREREKIRRAGWWN*
Ga0066675_101233966	3300005187	Soil	MNDRAWQHRWLRVQSLIRSILEVRRDEETRPMMKVTMTKALWEREKIRRAGWWN*
Ga0066686_102752553	3300005446	Soil	QHRWLRVQRLIRSILEVRRDEETRPMMKVTMTKALWEREKIRRAGWWN*
Ga0066686_103231161	3300005446	Soil	RRWQPPWLRVQRLIRSITEVRWQGAARPVMKATLTKALRERDKIRRDGWMN*
Ga0066689_100741761	3300005447	Soil	VIVAGNTPARIQRLIRSILEVHRDPVTRPVMKATLTKALKERHRIRRAGWMN*
Ga0066689_106981952	3300005447	Soil	VTSDRFWYPWLRVQRLMRSILEVRRDEVTRPLMKATLTKALREREQIRRDGWMN*
Ga0066697_107190573	3300005540	Soil	LWHPWFRVQRLIRAILETSADREARPVMQTTLVEALKEREKIRRAGWWN*
Ga0066701_104866571	3300005552	Soil	GPAWAEGEVMQAWQHPWLRVQRLIRSILEVRRDPITRPMMKATFREAIKEREKIRRAGWFS*
Ga0066701_107816041	3300005552	Soil	MNEREQTWQHPWLRLDRLIRSILEVRRDPITRPVMKATLTNALREREKIRRAGW
Ga0066701_109549361	3300005552	Soil	HPWLRIERLIRSILEVRRDPVTRPVLKATLTKALREGEKIRRAGWWN*
Ga0066692_100739253	3300005555	Soil	VPRVTDTRWQHPWLRVQRLIRSILEVRRDPVTPPVMKATLVEALREREKIRRAGWFS*
Ga0066692_102521763	3300005555	Soil	MNDRAWQHPSLRVQRLIRSILEVRRDPITRPVMKATMTKALREREKIRRAGWWN*
Ga0066707_101705251	3300005556	Soil	MATLRTAWQHPWLRVQRLIRSILEVRRDPITRPVMKATRTKALREREKIRRAGWFS*
Ga0066704_101984671	3300005557	Soil	VRWPGKAWSPAEKGWHPWLRVQRLIRSILEVRRDEVTRPVMKATLTDALREREKIKRVGWFS*
Ga0066694_103059232	3300005574	Soil	VTSSSAWQHPWLRVQRLIRSILEVRLDPVTRSVMKQTLREAVKEREKIRRAGWFS*
Ga0066694_106144332	3300005574	Soil	MSDRAWQHPWLRIQRLIRSILEVRRDEVTRPVMKVTLRDALKEREKIRRAGWWN*
Ga0066691_100766074	3300005586	Soil	MNDRAWQHPWLRVSVIRSILEVRRDPITRPVMKATLTKALREREDPPRRLVELI*
Ga0066691_104044041	3300005586	Soil	WQHPWLRIQRLIRSILEVRRDPVTRPVMKATLTDALREREKIRHAGWMH*
Ga0066706_105571403	3300005598	Soil	MTDRALSHPWLRVQRLIRSILEVRRDEVTRPVMKATLTDALHAREQIRRAGWFS*
Ga0066706_109023972	3300005598	Soil	VTSSSAWQHPWLRVQRLIRSILEVRLDPVTRSVMKQTLREAVKEREKIRCAGWFS*
Ga0066905_1002131753	3300005713	Tropical Forest Soil	VNIKAPSGDPMTDRALWHPWIRAVRLIRTILEVRRDEVTRPMLNATLMEAIRERKKIRRAGWWN*
Ga0066656_109584251	3300006034	Soil	MSDRAWQHPRLRIQRLIRSILNIPRDEITRPVMKVTLRDALREREKIRRAGWFS*
Ga0066658_109369952	3300006794	Soil	VPRVTDTRWGTPGFRVERLIRSITQQRWHPVTRPPMKETLRDAVREREKIRRAGWMN*
Ga0066665_105497111	3300006796	Soil	MSDRGWQHPRLRIQRLIRSILEVRRDAVTRPVMKVTLTKALREREKIERAGWFS*
Ga0066665_112095492	3300006796	Soil	MNDREQTWQHPWLRIQRLIRSILEVRRDPVTRPVMKATLTDALREREKIRHAGWMH*
Ga0066665_113200292	3300006796	Soil	VPRVTDTRWQHPWLRIQRLIRSILEVRRDEVTRPVMKTTLKDALKEREKIRRAGWWN*
Ga0066665_115616901	3300006796	Soil	PDYNLFWHPWLRVERLIRSILEVRRDEVTRPVMKATLRDAIREREKIRRAGWMN*
Ga0066659_105360882	3300006797	Soil	MNRRTWQHPWLRIQRLIRVILEVRRDEVTRPIMKTTLKDALKEREKIRRAGWWN*
Ga0066659_114323922	3300006797	Soil	MTDTRWQHPWLRVQRLIRSILEVRRDTITRSVVKATLTKALREREKIRRAGWWN*
Ga0066659_116030981	3300006797	Soil	SAWQHPWLRVQRLIRSIVDVRRDLVTRPVMKATLTKALREREKIRRAGWWN*
Ga0075425_1007071641	3300006854	Populus Rhizosphere	WQHPWLRIQRLIRSILEVRRDEITRPVMKETLKDALKEREKIRRAGWWN*
Ga0075425_1017671252	3300006854	Populus Rhizosphere	VTDRTWQHPWLRIQRLIRSILEVRRDGVTRPVMKATLTKAIREREKIRRAGWMN*
Ga0075426_106042282	3300006903	Populus Rhizosphere	MNERERTWQHPWLRIQRFILTILEVRRDEVTRPVLRKTLTEALKKREKI
Ga0075424_1013553512	3300006904	Populus Rhizosphere	MPVEADTVDHLWHPWLRVQRLIRAILKVRRDALTRTVMKATLRKALAEREKITRAG*
Ga0099791_101130781	3300007255	Vadose Zone Soil	MTGRIWQHPWLRIERLIRSILEVRRDPMTRPVMKATLVEALMERDRIRRAGWMN*
Ga0099791_103109532	3300007255	Vadose Zone Soil	PMDRETQEHSWQHPWLRIQRLIRSILEVRRDPITRPVMQATLTKALSEREKIRRAGWMN*
Ga0066710_1003064882	3300009012	Grasslands Soil	VTSDRFWYPWLRVQRLMRSILEVRRDEVTRPVMKATLTAGLREREKIKRAGWWN
Ga0066710_1015154902	3300009012	Grasslands Soil	MNRRTWQHPWLRIQRLIRVILEVRRDEVTRPIMKTTLKDALKEREKIRRAGWWN
Ga0066710_1015480802	3300009012	Grasslands Soil	MESAPWQHPWLRIERLIRSILEVRRDPITRPVMKKALTGALREREKIRRGGWMN
Ga0066710_1023568593	3300009012	Grasslands Soil	VATERAWQHPWLRIQRLIRSILEVRRDEVTRPVMKLALRDATKERESVRRAGWFN
Ga0066710_1032740251	3300009012	Grasslands Soil	MSDRAWQHPWLRIQRLIRGILEVRRDEVTRPVMKATLKDALKEREKIRRAGWFS
Ga0099827_107206852	3300009090	Vadose Zone Soil	MERDPAGSPSWQHPWLRIQRLIRSILEVRRDDATRAVMKATLRDALKEREKIRR
Ga0066709_1001835651	3300009137	Grasslands Soil	MSSRAWQHPWLRVQRLIRSILEVRRDSITRPVMKATLREAIKEREKIRRAGWWN*
Ga0066709_1004473201	3300009137	Grasslands Soil	MSDRAWQYPWLRIQRLIRTILEVRRHEVTRPVMKATLKDALKEREKIRRAGWWN*
Ga0066709_1004920291	3300009137	Grasslands Soil	MGSAAWQHPWLRIQRLIRSILEVRRDEVTRPVMKATLKDALKEREKIRRAGWWN*
Ga0066709_1006180731	3300009137	Grasslands Soil	WHPWLRVQRLIRSILKVRRDPVTRPMMKATLTGALREREKIRRAGWFS*
Ga0066709_1006967532	3300009137	Grasslands Soil	MTDRTWQHPWLRIQRLIRSILEVRRDPVARPVLRATVVEALKEREKIRRGGWMN*
Ga0066709_1007028733	3300009137	Grasslands Soil	LEHPWLRIERLIRAILEVRRDEVTRPVLRVTLRDAVKEREKSLRAGWFS*
Ga0066709_1015444161	3300009137	Grasslands Soil	MGMLPIAWQHPWLRTQRLIRSILEVRRNEVTRPVMKATLTKALKEREKIRRAGWWN*
Ga0066709_1032484693	3300009137	Grasslands Soil	FWHPWLRVERLIRSILEVRRDEVTRPVMKATLRDAIREREKIRRAGWMN*
Ga0126384_100646713	3300010046	Tropical Forest Soil	MTDRAVWHSWIRATRLIRAILEVRRDSVTRPALKATLTDAIRGREKMRRAGWVS*
Ga0126382_100176372	3300010047	Tropical Forest Soil	VNIKAPSGDPMTDRALWHPWIRAVRLIRTILEVRRDEVTRPMLNATLTEAIRERKKIRRAGWWN*
Ga0126382_101555583	3300010047	Tropical Forest Soil	MSEHLWHPWLRVQRLIRSVLEVHRDEVTRPVMKATLTRALREREKIRRAGWMN*
Ga0134070_101191211	3300010301	Grasslands Soil	VATERAWQHPWLRVQRLIRSILKVRRDEVTRPVMKATLTDALREREKIRRAGWFS*
Ga0134109_100327183	3300010320	Grasslands Soil	AAYCPRAMATLRTAWQHPWLRVQRLIRSILEVRRDPITRPVMKATRTKALREREKIRRAGWFS*
Ga0134084_101150851	3300010322	Grasslands Soil	VTDTRWQHPWLRVQRLIRSILEVRRDTITRPVMKATLTKARREREKIRRAG
Ga0134064_101935321	3300010325	Grasslands Soil	MNDRAWQHRWLRVQRLIRSILEVRRDPITRPVMKATRTKALREREKIRRAGWFS*
Ga0134111_100446563	3300010329	Grasslands Soil	WWWPRTVTSSSAWQHPWLRVQRLIRSILEVRLDPVTRSVMKQTLREAVKEREKIRCAGWFS*
Ga0134080_100131244	3300010333	Grasslands Soil	MPRVTDTRLQHPWLRMQRLIRSILEVRRDEETRPMMKVTMTKALWEREKIRRAGWWN*
Ga0134080_105119801	3300010333	Grasslands Soil	SSAWQHPWLRVQRLIRSILEVRLDPVTRSVMKQTLREAVKEREKIRRAGWFS*
Ga0134071_103789882	3300010336	Grasslands Soil	VNDRLWHPWLRVQRLIRAILEVRRDSITRPVMKATLTKALREREQIRRAGWMN*
Ga0134071_106868582	3300010336	Grasslands Soil	MNDRAWQHPWFRIQRLIRSILEVRRDPVAHPVMKATLVEALKERKKIRRAGWMN*
Ga0134062_100335735	3300010337	Grasslands Soil	QHPWLRMQRLIRSILEVRRDAVTRPVMKATLTKALREREKIRRAGWMN*
Ga0126376_109890544	3300010359	Tropical Forest Soil	MRSQQHSWLRIQRLIRAILGVHRDEVTRPVLKLPLRDAIREREKIRRAGWMN*
Ga0126378_131948331	3300010361	Tropical Forest Soil	MTDRALWHPWIRAVRLIRTILEVRRDEVTRPMLNATLTEAIRERKKIRRAGWRN*
Ga0137389_112808562	3300012096	Vadose Zone Soil	WLRIQRLIRAIIEVSREPITRPAMKVTLVEALKERERIRQAGWFS*
Ga0137382_104879772	3300012200	Vadose Zone Soil	MSDRAWQHPWLRIQRLIRSILEVRRDEVTRPVMKATLRDAIREREKI
Ga0137399_103427833	3300012203	Vadose Zone Soil	MDRSSRSASAWQHPWLRIQDLIRSILDVRRDPVTRPVMKATLTKALREREQIRRAGWMN*
Ga0137399_110383001	3300012203	Vadose Zone Soil	SGPGNTPPWLRIQRLIRSILDVRRGPATRPVMKATLTKALREREKIRRAGWFS*
Ga0137362_100318613	3300012205	Vadose Zone Soil	MSDRGWQHPRLRIQRLIRSILEVHRDPVTRPVMKATLTKALREREKIWRAGWFS*
Ga0137362_107957901	3300012205	Vadose Zone Soil	MSDRAWQHPWLRIQRLIRSILEVRRDPITRPMLKATFREAIKEREKIRRAGWFS*
Ga0137362_110013412	3300012205	Vadose Zone Soil	RISPKGDRLTPLTDRAWQHPWLRVQRLIRSILEVRRDEVTRPVLKATLTKALRERENIRRDGWMN*
Ga0137380_100386844	3300012206	Vadose Zone Soil	MSDRGWQHPRLRIQRLIRSILEVHRDPVTRPVMKATLTKALREREQIRRAGWFS*
Ga0137380_107487202	3300012206	Vadose Zone Soil	MNDRERTWQHPWVRIQRLIRSILEVRRDPVARSVMKTTLVVKEREKIRRAGWMN*
Ga0137381_101494894	3300012207	Vadose Zone Soil	LTPSHHPWLRIERLIRSILEVRRDEVTRPVMKATLTKALKEREKIRRAGWMN*
Ga0137376_100057683	3300012208	Vadose Zone Soil	MNDRAWQHRWLRVQRLIRSILEVRRDPIARPVMKATLTKALREREKIRRADWWN*
Ga0137379_109017112	3300012209	Vadose Zone Soil	MSDRGWQHPRLRIQRLIRSILNIPRDEITRPVMKVTLRDALREREKIRRAGWFS*
Ga0137378_102095073	3300012210	Vadose Zone Soil	MNDRAWQHPSLRVQRLIRSILEVRRDEETRPMMKVTMTKALWEREKIRRAGWWN*
Ga0137377_109287171	3300012211	Vadose Zone Soil	VSNLPLWRPWLRIQRLIRSILEVRRDPITRPVMKATMTKALREREKIRRAGWWN*
Ga0137387_100540661	3300012349	Vadose Zone Soil	MTDRALSHPWLRIERLIRSILEVRRDPITRPVMKATLTKALRVREKIRRAGWWN*
Ga0137386_101597191	3300012351	Vadose Zone Soil	MTDRTWQHPWLRIQRLIRSILEVRRDPMTRPVMKAMLVEALKERDRIRRAGWMS*
Ga0137386_106072422	3300012351	Vadose Zone Soil	MTDRALSHPRLRIERLSRSILEVRRDPITRPVMKATLKRALEERKKIRRAGWFN*
Ga0137385_107361972	3300012359	Vadose Zone Soil	MSDRGWQHPRLRIQRLIRSILEVHRDPVTRPVMKATLTKALREREQIRRAGWF
Ga0137361_105397731	3300012362	Vadose Zone Soil	SRGNERRDAAQMKDRVWHPWLSIQRLIRSILEVRRDEVTRPVLKATLTKALRERENIRRDGWMN*
Ga0137361_106713732	3300012362	Vadose Zone Soil	MNDRAWQYPWLRIQRLIRGILEVRRDPVTRPVMKATLTKALREREKIRRAGWFS*
Ga0137361_117327021	3300012362	Vadose Zone Soil	VPRVTDTHWQHPWLRVQRLIRSILEVRRDTITRPVMKATLTKARREREKIRRAGWWN*
Ga0137397_108290771	3300012685	Vadose Zone Soil	MRNRAWQHPWLRIERLIRSILEVRRDPMTRPVMKATLVEALKERDRIRRAGWMN
Ga0137407_111176691	3300012930	Vadose Zone Soil	WQHSWLRIQRLIRSILEVRRDAVTRPVMKQTLREAVKEREKIRRTGWFS*
Ga0137410_111596302	3300012944	Vadose Zone Soil	PSAMGSAAWQHPWLRIQRLIRSILEVRRDEVTRPVMKATLVEALMERDRIRRAGWMN*
Ga0126375_112355292	3300012948	Tropical Forest Soil	QHPWLRIQRLIRSILEVRRDEWTRPTLGDALKEREKIRRAEWMN*
Ga0134077_101947382	3300012972	Grasslands Soil	MDRSSRSASAWQHPWLRIQHLIRSILDVRRDPVTRPVMKATLTKALREREQIRRAGWMN*
Ga0134075_105630003	3300014154	Grasslands Soil	RSSHPVTDRAWQHPWLRIQRLIRSILEVRRDEITRPVMKATLRDAIREREKIRRAGWMN*
Ga0134079_105241561	3300014166	Grasslands Soil	MATLRTAWQHPWLRVQRLIRSILEVRRDPITRPVMKATLTKALREREKIRRAGWFS*
Ga0134089_100714373	3300015358	Grasslands Soil	MNDREQTWQHPWLRFQRLIRSILEVRRDPVTRPVMKATLTDALREREKI
Ga0134112_101929751	3300017656	Grasslands Soil	MTDRTWQHPWLRVERLIRSILEVRRDPVTRPVMKETLREALKEREKIRRAGGFS
Ga0134083_100282611	3300017659	Grasslands Soil	MNEREQTWQHPWLRLDRLIRSILEVRRDPIARPVMKATLTTALRERERSAAQT
Ga0134083_102389271	3300017659	Grasslands Soil	PWLRVQRLMRSILEVRRDEVTRPVMKATLTAALREREKIKRAGWWN
Ga0134083_103724321	3300017659	Grasslands Soil	HPWLRIQRLIRSILEVRRDEITRPVMKATLRDAIREREKIRRAGWIN
Ga0066655_100121277	3300018431	Grasslands Soil	VPRVTDTRWQHPWLRVQRLIRSILEVRRDTITRPVMKATLTKARREREKIRRAGWWN
Ga0066655_100142505	3300018431	Grasslands Soil	MNDRAWQHRWLRVQRLIRSILEVRRDEETRPMMKVTMTKALWEREKIRRAGWWN
Ga0066667_102121514	3300018433	Grasslands Soil	MTDRALSHPWLRVQRLIRSILEVRRDEVTRPVMKATLTDALREREKIKRVGWFS
Ga0066667_105697772	3300018433	Grasslands Soil	MSDRAWQHPWLRIQRLIRSILEVRRDEVTRPVMKVTLRDALKEREKIRRAGWWN
Ga0066667_110052472	3300018433	Grasslands Soil	MTDRTWQHPWLRIQRLIRSILEVRRDPMTRPVMKAMLVEALKERDRIRRAGWMS
Ga0066662_106465661	3300018468	Grasslands Soil	MSDRAWQHPWLRIQRLIRSILEVRRDPITRPMMKATFREAIKEREKIRRAGWFS
Ga0066662_106923522	3300018468	Grasslands Soil	MSDRGWQHPRLRIQRLIRTILEVHRDPVTRPVMKATLTKALREREKIRRAGWFS
Ga0066662_110682062	3300018468	Grasslands Soil	VARVTDTGWQHPWLRIQRLIRAIIEVSREPITRPVMKVTLVEALKEREIIREAGWFS
Ga0066669_108313401	3300018482	Grasslands Soil	VTSSSAWQHPWLRVQRLIRSILEVRLDPVTRSVMKQTLREAVKEREKIRRAGWFS
Ga0066669_116422541	3300018482	Grasslands Soil	MSGRAWQHPGLRIQRLIRSILEVRRDEVTRPVMKVTLRDALKEREKIRRAGWWN
Ga0209350_10547892	3300026277	Grasslands Soil	VPRVTDTRWQHLWLRVQRLIRSILEVRRDTITRPVMKATLTKALREREKIRRAGWWN
Ga0209237_10231489	3300026297	Grasslands Soil	WYPWLRVQRLMRSILEVRRDEVTRPVMKATLTAALREREKIKRAGWWN
Ga0209237_11824281	3300026297	Grasslands Soil	MTDRALSHPWLRVQRLIRSILEVRRDEVTRPVMKATLTDALGEREKIKRVGWFS
Ga0209468_10157862	3300026306	Soil	MATLRTAWQHPWLRVQRLIRSILEVRRDPITRPVMKATRTKALREREKIRRAGWFS
Ga0209239_10087715	3300026310	Grasslands Soil	VPRVTDTRWQHPWLRVQRLIRSILEVRRDTIPRPVMKATLTKALREREKIRRAGWWN
Ga0209761_11722583	3300026313	Grasslands Soil	MNEREQTWQHPWLRLDRLIRSILEVRRDPITRPVMKATLTNALREREKIRRAGWWN
Ga0209761_13279371	3300026313	Grasslands Soil	MNDRAWQHPWFRIQRLIRSILEVRRDPVAHPVMKATLVEALKERKKIRRAG
Ga0209470_13464241	3300026324	Soil	SHPWLRIERLIRSILEVRRDPITRPVMKATLTKALRVREKIRRAGWWN
Ga0209802_12337031	3300026328	Soil	LTPSHHPWLRIERLIRSILEVRRDPVTRPVMKATLTKALKEREKIRRAGWMN
Ga0209158_11202252	3300026333	Soil	MTDRTWQHPWLRIQRLIRSILEVRRDPVARPVLRATVVEALKEREKIRRGG
Ga0209377_10395021	3300026334	Soil	VPRVTDTRWQQPWLRVQCLIRSILEVRRDTITRPVMKATLTKARREREKIRRAGWWN
Ga0209377_11450041	3300026334	Soil	VTAAWQHPWLRIERLIRSILDVRWHPVTRPLMKATLVEALKEREEIRRAWW
Ga0209377_12984572	3300026334	Soil	VTSDRFWYPWLRVQRLMRSILEVRRDEVTRPVMKATLTAALREREKIKRAGWW
Ga0209058_11916543	3300026536	Soil	ISVTSDRFWYPWLRVQRLMRSILEVRRDEVTRPVMKATLTAALREREKIKRAGWWN
Ga0209157_11786983	3300026537	Soil	DAAGSRRWQPPWLRVQRLIRSITEVRWQGAARPVMKATLTKALRERDKIRRDGWMN
Ga0209157_12028531	3300026537	Soil	HVLFRAILRAGSDERPRQHRWLRVQRLIRSILEVRRDEETRPMMKVTMTKALWEREKIRRAGWWN
Ga0209056_103346081	3300026538	Soil	QHPWLRIQRLIRSILEVRRDAVTRPVMKATLTKALREREQIRRAGWMN
Ga0209056_107311321	3300026538	Soil	MNDREQTWQHPWLRIQRLIRSILEVRRDPVTRPVMKATLTDALREREKIRHAGWMH
Ga0209799_10169642	3300027654	Tropical Forest Soil	MIDRALWHPWIRAQRLIRSILETRWPGPAREVMKATLTRALREREKIRRAGWMN
Ga0209388_11138771	3300027655	Vadose Zone Soil	RAWQHPWLRIERLIRSILEVRRDPMTRPVMKATLVEALMERDRIRRAGWMN
Ga0209701_102790631	3300027862	Vadose Zone Soil	HPWLRVERLIRSILKVRRDPMTRPVMKATLVVALKERDRIRRAGWMN
Ga0307469_122329682	3300031720	Hardwood Forest Soil	MDRDDGMTSRAWQHPWRIERLLRSILETRWDREARPVMKATSRDALKAREQIRRAGWMN
Ga0307473_103537473	3300031820	Hardwood Forest Soil	STAWQHPWLRVQRLIRSILEVRRDGVTRPVMKATLTKAIREREKIRRAGWMN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F041669

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences