Metagenome / Metatranscriptome Family F041718

Basic Information
Family ID	F041718
Family Type	Metagenome / Metatranscriptome
Number of Sequences	159
Average Sequence Length	43 residues
Representative Sequence	VPKLVWRVKLVAELRPGVMTETEVARIERDEQAGLAELGLR
Number of Associated Samples	113
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.91 %
% of genes near scaffold ends (potentially truncated)	89.31 %
% of genes from short scaffolds (< 2000 bps)	89.94 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Most Common Taxonomy
Group	Bacteria (67.925 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock (16.352 % of family members)
Environment Ontology (ENVO)	Unclassified (18.868 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (35.849 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.14% β-sheet: 37.68% Coil/Unstructured: 52.17%
Feature Viewer

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Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF01609	DDE_Tnp_1	2.52
PF13408	Zn_ribbon_recom	1.89
PF02371	Transposase_20	1.89
PF04199	Cyclase	1.26
PF01575	MaoC_dehydratas	1.26
PF13586	DDE_Tnp_1_2	1.26
PF13701	DDE_Tnp_1_4	1.26
PF00665	rve	1.26
PF13751	DDE_Tnp_1_6	1.26
PF13358	DDE_3	1.26
PF01548	DEDD_Tnp_IS110	1.26
PF00216	Bac_DNA_binding	1.26
PF03401	TctC	0.63
PF13609	Porin_4	0.63
PF13362	Toprim_3	0.63
PF06202	GDE_C	0.63
PF00078	RVT_1	0.63
PF08281	Sigma70_r4_2	0.63
PF00108	Thiolase_N	0.63
PF13610	DDE_Tnp_IS240	0.63
PF00903	Glyoxalase	0.63
PF03626	COX4_pro	0.63
PF01656	CbiA	0.63
PF00118	Cpn60_TCP1	0.63
PF13155	Toprim_2	0.63
PF13333	rve_2	0.63
PF03640	Lipoprotein_15	0.63
PF05992	SbmA_BacA	0.63
PF00872	Transposase_mut	0.63
PF01471	PG_binding_1	0.63
PF00589	Phage_integrase	0.63
PF05974	DUF892	0.63
PF14106	DUF4279	0.63
PF13591	MerR_2	0.63
PF01408	GFO_IDH_MocA	0.63
PF00528	BPD_transp_1	0.63
PF13551	HTH_29	0.63
PF07969	Amidohydro_3	0.63
PF13384	HTH_23	0.63
PF06745	ATPase	0.63
PF00593	TonB_dep_Rec	0.63
PF02534	T4SS-DNA_transf	0.63
PF00574	CLP_protease	0.63
PF12762	DDE_Tnp_IS1595	0.63
PF01610	DDE_Tnp_ISL3	0.63
PF00529	CusB_dom_1	0.63
PF10335	DUF294_C	0.63
PF12760	Zn_Tnp_IS1595	0.63
PF13340	DUF4096	0.63
PF08240	ADH_N	0.63
PF07508	Recombinase	0.63
PF08734	GYD	0.63
PF05973	Gp49	0.63
PF13188	PAS_8	0.63
PF00171	Aldedh	0.63
PF03466	LysR_substrate	0.63
PF13737	DDE_Tnp_1_5	0.63
PF05853	BKACE	0.63
PF02515	CoA_transf_3	0.63
PF13495	Phage_int_SAM_4	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	3.14
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	2.52
COG3293	Transposase	Mobilome: prophages, transposons [X]	2.52
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	2.52
COG5421	Transposase	Mobilome: prophages, transposons [X]	2.52
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	2.52
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	2.52
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.26
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	1.26
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	1.26
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	1.26
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	1.26
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	1.26
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	1.26
COG4584	Transposase	Mobilome: prophages, transposons [X]	1.26
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.63
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.63
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.63
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.63
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	0.63
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.63
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.63
COG3125	Heme/copper-type cytochrome/quinol oxidase, subunit 4	Energy production and conversion [C]	0.63
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.63
COG3246	Uncharacterized conserved protein, DUF849 family	Function unknown [S]	0.63
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.63
COG3408	Glycogen debranching enzyme (alpha-1,6-glucosidase)	Carbohydrate transport and metabolism [G]	0.63
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.63
COG3505	Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase	Intracellular trafficking, secretion, and vesicular transport [U]	0.63
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.63
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.63
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.63
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.63
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	0.63
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.92 %
Unclassified	root	N/A	32.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.92 %
Unclassified	root	N/A	32.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.92 %
Unclassified	root	N/A	32.08 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	42.77 %
Unclassified	root	N/A	32.08 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	34.59 %
Unclassified	root	N/A	32.08 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.63 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.08 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	15.09 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.63 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.63 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.63 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.08 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	11.32 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2.52 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.26 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.26 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.63 %
Chelatococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae	0.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.63 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.63 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.63 %
Brucellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae	0.63 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.08 %
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	2.52 %
Belnapia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia	1.89 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.26 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1.26 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.26 %
Rhodovastum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum	0.63 %
Caballeronia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia	0.63 %
Brucella/Ochrobactrum group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group	0.63 %
Dankookia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Dankookia	0.63 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.63 %
unclassified Acetobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae	0.63 %
Chelatococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus	0.63 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.63 %
Paracraurococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Paracraurococcus	0.63 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.63 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	0.63 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples	0.63 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.63 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.08 %
unclassified Acidisphaera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera	2.52 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	1.26 %
Chelatococcus reniformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus reniformis	0.63 %
Dankookia rubra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Dankookia → Dankookia rubra	0.63 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.63 %
Belnapia moabensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → Belnapia moabensis	0.63 %
Sphingobium indicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium indicum	0.63 %
Rhodovastum atsumiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	0.63 %
Belnapia mucosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → Belnapia mucosa	0.63 %
unclassified Caballeronia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → unclassified Caballeronia	0.63 %
unclassified Belnapia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → unclassified Belnapia	0.63 %
Roseomonas wenyumeiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas wenyumeiae	0.63 %
Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	0.63 %
Microvirga ossetica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga ossetica	0.63 %
Rhodopila globiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	0.63 %
Agrobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium	0.63 %
Brucella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Brucella	0.63 %
Azospirillum lipoferum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum lipoferum	0.63 %
Mesorhizobium plurifarium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium plurifarium	0.63 %
uncultured Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	0.63 %
Paracraurococcus ruber	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Paracraurococcus → Paracraurococcus ruber	0.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.08 %
Acidisphaera sp. S103	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	2.52 %
Methylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	1.26 %
Belnapia sp. F-4-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → unclassified Belnapia → Belnapia sp. F-4-1	0.63 %
Sphingobium indicum BiD32	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium indicum → Sphingobium indicum BiD32	0.63 %
Caballeronia sp. AZ10_KS36	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → unclassified Caballeronia → Caballeronia sp. AZ10_KS36	0.63 %
Agrobacterium rhizogenes	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium rhizogenes	0.63 %
Brucella pinnipedialis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Brucella → Brucella pinnipedialis	0.63 %
Chelatococcus reniformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus reniformis	0.63 %
Dankookia rubra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Dankookia → Dankookia rubra	0.63 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.63 %
Belnapia moabensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → Belnapia moabensis	0.63 %
Rhodovastum atsumiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	0.63 %
Belnapia mucosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → Belnapia mucosa	0.63 %
Roseomonas wenyumeiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas wenyumeiae	0.63 %
Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	0.63 %
Microvirga ossetica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga ossetica	0.63 %
Rhodopila globiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	0.63 %
Azospirillum lipoferum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum lipoferum	0.63 %
Mesorhizobium plurifarium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium plurifarium	0.63 %
uncultured Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	0.63 %
Paracraurococcus ruber	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Paracraurococcus → Paracraurococcus ruber	0.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111000\|2209888357	Not Available	515	Open in IMG/M
3300001686\|C688J18823_11093867	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300003219\|JGI26341J46601_10209711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	527	Open in IMG/M
3300003368\|JGI26340J50214_10093439	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300004152\|Ga0062386_100967143	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300005184\|Ga0066671_10203524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1192	Open in IMG/M
3300005366\|Ga0070659_101729116	Not Available	560	Open in IMG/M
3300005506\|Ga0068912_11170667	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300005539\|Ga0068853_101700247	Not Available	612	Open in IMG/M
3300005602\|Ga0070762_10781111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	645	Open in IMG/M
3300005618\|Ga0068864_102564712	Not Available	516	Open in IMG/M
3300005718\|Ga0068866_10505249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	800	Open in IMG/M
3300006642\|Ga0075521_10067977	Not Available	1588	Open in IMG/M
3300006642\|Ga0075521_10503377	Not Available	594	Open in IMG/M
3300006794\|Ga0066658_10113121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1310	Open in IMG/M
3300006804\|Ga0079221_11075982	Not Available	612	Open in IMG/M
3300006806\|Ga0079220_10033072	All Organisms → cellular organisms → Bacteria	2310	Open in IMG/M
3300006806\|Ga0079220_10716391	Not Available	739	Open in IMG/M
3300006881\|Ga0068865_101893239	Not Available	540	Open in IMG/M
3300006893\|Ga0073928_11048778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	554	Open in IMG/M
3300009098\|Ga0105245_10679253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1062	Open in IMG/M
3300009174\|Ga0105241_11303963	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300009400\|Ga0116854_1099259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Dankookia → Dankookia rubra	697	Open in IMG/M
3300009701\|Ga0116228_11181569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	505	Open in IMG/M
3300009709\|Ga0116227_10769438	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300009789\|Ga0126307_10582305	Not Available	904	Open in IMG/M
3300009789\|Ga0126307_11518545	Not Available	543	Open in IMG/M
3300009840\|Ga0126313_10579794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	903	Open in IMG/M
3300009840\|Ga0126313_11191027	Not Available	628	Open in IMG/M
3300010036\|Ga0126305_10903999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas wenyumeiae	603	Open in IMG/M
3300010037\|Ga0126304_10076495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	2081	Open in IMG/M
3300010037\|Ga0126304_11051859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	556	Open in IMG/M
3300010037\|Ga0126304_11224868	Not Available	515	Open in IMG/M
3300010038\|Ga0126315_10224197	Not Available	1140	Open in IMG/M
3300010040\|Ga0126308_10806967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Paracraurococcus → Paracraurococcus ruber	650	Open in IMG/M
3300010041\|Ga0126312_10381047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1001	Open in IMG/M
3300010041\|Ga0126312_10433170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga ossetica	937	Open in IMG/M
3300010042\|Ga0126314_10268311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1213	Open in IMG/M
3300010044\|Ga0126310_11435484	Not Available	564	Open in IMG/M
3300010044\|Ga0126310_11465542	Not Available	559	Open in IMG/M
3300010044\|Ga0126310_11628626	Not Available	534	Open in IMG/M
3300010045\|Ga0126311_10493153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus reniformis	957	Open in IMG/M
3300010045\|Ga0126311_10741043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium rhizogenes	788	Open in IMG/M
3300010146\|Ga0126320_1000403	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300010146\|Ga0126320_1094572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	563	Open in IMG/M
3300010166\|Ga0126306_10290913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1256	Open in IMG/M
3300010341\|Ga0074045_10061827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2673	Open in IMG/M
3300010373\|Ga0134128_12156827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Brucella → Brucella pinnipedialis	614	Open in IMG/M
3300010375\|Ga0105239_10804847	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300010403\|Ga0134123_13294443	All Organisms → cellular organisms → Bacteria → Proteobacteria	521	Open in IMG/M
3300011106\|Ga0151489_1191645	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300011119\|Ga0105246_10036648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3287	Open in IMG/M
3300012212\|Ga0150985_100644815	All Organisms → cellular organisms → Bacteria → Proteobacteria	533	Open in IMG/M
3300012212\|Ga0150985_101419487	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300012212\|Ga0150985_103492398	Not Available	751	Open in IMG/M
3300012212\|Ga0150985_108687777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	871	Open in IMG/M
3300012212\|Ga0150985_111270296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1334	Open in IMG/M
3300012212\|Ga0150985_113944519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	745	Open in IMG/M
3300012212\|Ga0150985_114228141	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300012212\|Ga0150985_115826498	Not Available	720	Open in IMG/M
3300012212\|Ga0150985_119637641	Not Available	691	Open in IMG/M
3300012212\|Ga0150985_121165118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → unclassified Belnapia → Belnapia sp. F-4-1	840	Open in IMG/M
3300012469\|Ga0150984_103276316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → Belnapia moabensis	879	Open in IMG/M
3300012469\|Ga0150984_111549901	Not Available	536	Open in IMG/M
3300012469\|Ga0150984_114850637	Not Available	603	Open in IMG/M
3300012469\|Ga0150984_119721105	Not Available	610	Open in IMG/M
3300012469\|Ga0150984_122596039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	1234	Open in IMG/M
3300013308\|Ga0157375_10124501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2691	Open in IMG/M
3300014487\|Ga0182000_10392279	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300014488\|Ga0182001_10087971	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300014488\|Ga0182001_10178233	All Organisms → cellular organisms → Bacteria → Proteobacteria	755	Open in IMG/M
3300014968\|Ga0157379_10790286	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300014969\|Ga0157376_10738711	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300015262\|Ga0182007_10368739	Not Available	543	Open in IMG/M
3300018037\|Ga0187883_10327039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	783	Open in IMG/M
3300018046\|Ga0187851_10351164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	848	Open in IMG/M
3300018431\|Ga0066655_11341188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	516	Open in IMG/M
3300018468\|Ga0066662_12828241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300018469\|Ga0190270_10494044	Not Available	1164	Open in IMG/M
3300018920\|Ga0190273_11832568	Not Available	554	Open in IMG/M
3300018946\|Ga0193599_1151641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → Belnapia mucosa	746	Open in IMG/M
3300019377\|Ga0190264_10903205	All Organisms → cellular organisms → Bacteria → Proteobacteria	690	Open in IMG/M
3300020021\|Ga0193726_1199596	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300021170\|Ga0210400_10260625	All Organisms → cellular organisms → Bacteria → Proteobacteria	1419	Open in IMG/M
3300021170\|Ga0210400_10651841	Not Available	867	Open in IMG/M
3300021362\|Ga0213882_10059398	All Organisms → cellular organisms → Bacteria	1519	Open in IMG/M
3300021374\|Ga0213881_10064696	All Organisms → cellular organisms → Bacteria	1558	Open in IMG/M
3300021377\|Ga0213874_10046506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1317	Open in IMG/M
3300021404\|Ga0210389_11273597	Not Available	564	Open in IMG/M
3300021404\|Ga0210389_11526169	Not Available	507	Open in IMG/M
3300021405\|Ga0210387_10254872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1536	Open in IMG/M
3300021405\|Ga0210387_11025647	Not Available	722	Open in IMG/M
3300021405\|Ga0210387_11731842	Not Available	528	Open in IMG/M
3300021441\|Ga0213871_10133023	Not Available	748	Open in IMG/M
3300025703\|Ga0208357_1128508	Not Available	727	Open in IMG/M
3300025878\|Ga0209584_10038140	Not Available	1677	Open in IMG/M
3300025878\|Ga0209584_10326331	Not Available	591	Open in IMG/M
3300025900\|Ga0207710_10088699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1445	Open in IMG/M
3300025901\|Ga0207688_10213528	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300025901\|Ga0207688_10362358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	895	Open in IMG/M
3300025916\|Ga0207663_11705521	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300025929\|Ga0207664_10570014	All Organisms → cellular organisms → Bacteria → Proteobacteria	1016	Open in IMG/M
3300025941\|Ga0207711_10875761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	835	Open in IMG/M
3300025972\|Ga0207668_12098493	Not Available	509	Open in IMG/M
3300026035\|Ga0207703_10148888	Not Available	2039	Open in IMG/M
3300026041\|Ga0207639_11542190	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300026067\|Ga0207678_10743793	Not Available	864	Open in IMG/M
3300026075\|Ga0207708_11386829	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300026089\|Ga0207648_10364770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1304	Open in IMG/M
3300026118\|Ga0207675_102514114	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300027619\|Ga0209330_1092337	Not Available	689	Open in IMG/M
3300027750\|Ga0209461_10146531	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300027812\|Ga0209656_10342585	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300027903\|Ga0209488_11155409	Not Available	524	Open in IMG/M
3300028587\|Ga0247828_10589703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300028705\|Ga0307276_10221072	Not Available	504	Open in IMG/M
3300028798\|Ga0302222_10044322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	1810	Open in IMG/M
3300029999\|Ga0311339_11450768	Not Available	614	Open in IMG/M
3300030523\|Ga0272436_1031256	All Organisms → cellular organisms → Bacteria → Proteobacteria	3205	Open in IMG/M
3300030545\|Ga0210271_10665149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1010	Open in IMG/M
3300031058\|Ga0308189_10511131	Not Available	519	Open in IMG/M
3300031091\|Ga0308201_10327709	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300031231\|Ga0170824_109143487	All Organisms → cellular organisms → Bacteria → Proteobacteria	812	Open in IMG/M
3300031234\|Ga0302325_10965216	Not Available	1171	Open in IMG/M
3300031234\|Ga0302325_13141437	Not Available	529	Open in IMG/M
3300031449\|Ga0272429_1076600	All Organisms → cellular organisms → Bacteria → Proteobacteria	2178	Open in IMG/M
3300031449\|Ga0272429_1237500	Not Available	670	Open in IMG/M
3300031449\|Ga0272429_1247033	Not Available	640	Open in IMG/M
3300031451\|Ga0272426_1177904	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300031453\|Ga0272425_1033535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3207	Open in IMG/M
3300031453\|Ga0272425_1184847	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300031454\|Ga0272427_1091496	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300031454\|Ga0272427_1099770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1068	Open in IMG/M
3300031454\|Ga0272427_1135406	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300031454\|Ga0272427_1199446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → unclassified Caballeronia → Caballeronia sp. AZ10_KS36	564	Open in IMG/M
3300031460\|Ga0272430_1066768	All Organisms → cellular organisms → Bacteria → Proteobacteria	2055	Open in IMG/M
3300031470\|Ga0272432_1063519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2063	Open in IMG/M
3300031470\|Ga0272432_1064012	Not Available	2049	Open in IMG/M
3300031470\|Ga0272432_1090839	All Organisms → cellular organisms → Bacteria	1545	Open in IMG/M
3300031472\|Ga0272437_1058307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3104	Open in IMG/M
3300031472\|Ga0272437_1149583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum lipoferum	1379	Open in IMG/M
3300031474\|Ga0170818_106857655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium indicum → Sphingobium indicum BiD32	788	Open in IMG/M
3300031520\|Ga0272428_1035702	All Organisms → cellular organisms → Bacteria → Proteobacteria	4406	Open in IMG/M
3300031520\|Ga0272428_1176765	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300031520\|Ga0272428_1211108	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300031520\|Ga0272428_1404599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300031902\|Ga0302322_102464810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	641	Open in IMG/M
3300031938\|Ga0308175_103192000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	508	Open in IMG/M
3300032126\|Ga0307415_101556390	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300032162\|Ga0272424_1271267	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300033168\|Ga0272423_1020070	All Organisms → cellular organisms → Bacteria	5262	Open in IMG/M
3300033168\|Ga0272423_1060203	All Organisms → cellular organisms → Bacteria	2501	Open in IMG/M
3300033181\|Ga0272431_10208090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium plurifarium	1106	Open in IMG/M
3300033181\|Ga0272431_10371622	Not Available	656	Open in IMG/M
3300033887\|Ga0334790_057314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1418	Open in IMG/M
3300034000\|Ga0334918_064204	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300034007\|Ga0334936_112846	Not Available	568	Open in IMG/M
3300034358\|Ga0370485_0193695	Not Available	635	Open in IMG/M
3300034377\|Ga0334931_143605	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.33%
Host-Associated	Host-Associated	27.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.67%
Plants	Host-Associated → Plants	27.67%
Aquatic	Environmental → Aquatic	5.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.28%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	16.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.58%
Freshwater	Environmental → Aquatic → Freshwater	5.03%
Peat	Environmental → Terrestrial → Peat	3.77%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	1.26%
Peat Moss	Host-Associated → Plants → Peat Moss	1.26%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.63%
Roots	Host-Associated → Plants → Roots	0.63%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.11%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	16.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.29%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.29%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.03%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.77%
Loam	Environmental → Terrestrial → Soil → Loam	3.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.77%
Sand	Environmental → Terrestrial → Soil → Sand	1.89%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.26%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	1.26%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	1.26%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	1.26%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.63%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.63%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.38%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	16.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.03%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.77%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.89%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.26%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.26%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	1.26%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	1.26%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	1.26%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.63%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.63%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.63%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	16.35%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	11.95%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	6.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.03%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.14%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.14%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.52%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.89%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.26%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.26%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.26%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	1.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.26%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	1.26%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.63%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.63%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.63%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.63%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	0.63%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.63%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.63%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.63%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.63%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111000	Soil microbial communities from Colorado Plateau, Greene Butte sample - Dark Crust, Colorado Plateau, Green Butte	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005506	Soil microbial communities from Colorado Plateau, USA - Soil Crust after dry out 3A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009400	Soil microbial community of the Robinson Ridge, Antarctica. Combined Assembly of Gp0139162, Gp0138857, Gp0138858	Environmental	Open in IMG/M
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300018946	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300025703	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030523	Rock endolithic microbial communities from Victoria Land, Antarctica - Richard Nunatak white sandstone	Environmental	Open in IMG/M
3300030545	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO142-VCO033SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031449	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt sud	Environmental	Open in IMG/M
3300031451	Rock endolithic microbial communities from Victoria Land, Antarctica - Siegfried Peak nord	Environmental	Open in IMG/M
3300031453	Rock endolithic microbial communities from Victoria Land, Antarctica - Pudding Butte sud	Environmental	Open in IMG/M
3300031454	Rock endolithic microbial communities from Victoria Land, Antarctica - Siegfried Peak sud	Environmental	Open in IMG/M
3300031460	Rock endolithic microbial communities from Victoria Land, Antarctica - Linnaeus Terrace nord	Environmental	Open in IMG/M
3300031470	Rock endolithic microbial communities from Victoria Land, Antarctica - University Valley nord	Environmental	Open in IMG/M
3300031472	Rock endolithic microbial communities from Victoria Land, Antarctica - Richard Nunatak red sandstone	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031520	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt nord	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032162	Rock endolithic microbial communities from Victoria Land, Antarctica - Pudding Butte nord	Environmental	Open in IMG/M
3300033168	Rock endolithic microbial communities from Victoria Land, Antarctica - Mt New Zealand sud	Environmental	Open in IMG/M
3300033181	Rock endolithic microbial communities from Victoria Land, Antarctica - Linnaeus Terrace sud	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034000	Biocrust microbial communities from Mojave Desert, California, United States - 14HMC	Environmental	Open in IMG/M
3300034007	Biocrust microbial communities from Mojave Desert, California, United States - 32SMC	Environmental	Open in IMG/M
3300034358	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_16	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041718

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2210023648	2209111000	Soil	VPKLVWRVKLVAELEPGVATETEVARIERGEEVGLADLGLRLEEAKLELWPKLGDG
C688J18823_110938671	3300001686	Soil	VKLVAELRPGVMTETEVARIERDEQAGLADLGLRLAE
JGI26341J46601_102097111	3300003219	Bog Forest Soil	MPKMVWRVKLVAELEPGSTTEVEVARLERDEQAGLANLGLR
JGI26340J50214_100934392	3300003368	Bog Forest Soil	VPKLVWRVKLVAEPRPGVMTETEVARIERDEQAGLADLGLRL
Ga0062386_1009671431	3300004152	Bog Forest Soil	VAKLVWRVKLVTELRAGETTEVEVARIERDEQVDLSDLGL
Ga0066671_102035241	3300005184	Soil	VPKLVWRVKLVAELRPGVTTETEVARIERGAEAGLADLGLRLDEAKQL
Ga0070659_1017291161	3300005366	Corn Rhizosphere	VAKLVWRVKLVAELEPGVATETEVARFERDEVVGLADLGLRL
Ga0068912_111706672	3300005506	Soil	VPKLVWRVRLVAELRPGVTTETEVASIERGEEINPAELGLRLDE
Ga0068853_1017002472	3300005539	Corn Rhizosphere	VSKLVWRVKLVAELEPGVTTETEVARIERGEEAGLADLGLRL
Ga0070762_107811111	3300005602	Soil	VAKLVWRVKLVSELPAGVTTEVEIAHLERDEQAGVAELGLRLAEAKQLT
Ga0068864_1025647121	3300005618	Switchgrass Rhizosphere	VPKLVWRVKLVAELRPGVTTETEVARIERGAEAGLAELGLRLDEAKQLT
Ga0068866_105052492	3300005718	Miscanthus Rhizosphere	LVTELQTGETTEVEVARIERDEQAGLSDLGLRLAEAKQLT
Ga0075521_100679771	3300006642	Arctic Peat Soil	VPKLAWRVKVVAEFESGETTEVEVAHLERDVQVGLADLG
Ga0075521_105033771	3300006642	Arctic Peat Soil	MGSRDEGELVPKLVWRVKLVAELESGETTEVEVAHLERDVQVGLADLGL
Ga0066658_101131211	3300006794	Soil	VPKLVWRVKLVAELRPGVMTETEVARIERDEQAGLAELG
Ga0079221_110759821	3300006804	Agricultural Soil	VSRVELVAEPEPGVAIETELARIERDPQAGLADLGL
Ga0079220_100330721	3300006806	Agricultural Soil	VPKLVWRVKLVAELQPGVMTETEVARIERDAGANLAEL
Ga0079220_107163912	3300006806	Agricultural Soil	VTKLVWRLKVVAELRPGVVRETEVARIERDEQADLADLGLRLA
Ga0068865_1018932392	3300006881	Miscanthus Rhizosphere	MWRVKVVAEVQSGVTAETEVARIERDEEANLAELGLRLD
Ga0073928_110487781	3300006893	Iron-Sulfur Acid Spring	MVWRVKLVAAVQAGEPTEVELARFERDEQAGLAGLGLRLAEAKHG*
Ga0105245_106792531	3300009098	Miscanthus Rhizosphere	VPKLVWRVKLVAELQAGVTTETEVARIERGEEAGLADLGL
Ga0105241_113039632	3300009174	Corn Rhizosphere	VVKLRWRVKLVAEWPSGVITETELACIERDQQTGLADFGLSLAEA
Ga0116854_10992591	3300009400	Soil	VGKVVLRVKPVAELPAGEPTEVELACFERDEQVGLADLGLSLAEAKQLT
Ga0116228_111815692	3300009701	Host-Associated	LVAKLVWRIKLVTELQAGETTEVEVARFERYEQVGLSDLGLRLAEAK
Ga0116227_107694382	3300009709	Host-Associated	VPKLVWRVKLVAEFESGETTEVEVAHLERDVQVGLADLGLRLAEAK
Ga0126307_105823052	3300009789	Serpentine Soil	VPKLVWRVKLVAELQAGVTTETEVACIERDEEALLADLGLRLAE
Ga0126307_115185451	3300009789	Serpentine Soil	VPKLVWRVKLVAELRPGVTTETEVARIERGEAVGLAELGL
Ga0126313_105797942	3300009840	Serpentine Soil	LVSKLVWRVKLVVKLVAELEPGVTTETEVACLERGEEAGLADL
Ga0126313_111910272	3300009840	Serpentine Soil	VPKRVWRVKLVAELQPGVTTETEVARLERGEEAGLADLGL
Ga0126305_109039992	3300010036	Serpentine Soil	VLKLVWRVKLVAEPRPGVMTATEVARIERGAEAGLA
Ga0126304_100764951	3300010037	Serpentine Soil	VPKLVWRVKLVVELHAGATTETEVARIERGEEAGLADLGLRLDDVNGP*
Ga0126304_110518591	3300010037	Serpentine Soil	VPKLVWRVKLVAELRPGVMTETEVARIERDEQAGLAELGL
Ga0126304_112248681	3300010037	Serpentine Soil	VPKLVWRVKLVAELEPGVATETEVGRFERGEEVGLAD
Ga0126315_102241971	3300010038	Serpentine Soil	VAKLVWRVKLVAELQAGVTTETEVARIERGEEAGLADLGL
Ga0126308_108069672	3300010040	Serpentine Soil	VAKLVWRVKLVAELQPGVTTETEVARIGRDADANLAELGLRLE
Ga0126312_103810471	3300010041	Serpentine Soil	VPKLVWRVRLVAELRPGVATETEVACIERGGEINPAEL
Ga0126312_104331702	3300010041	Serpentine Soil	VPKLVWRLKLVAELAPGVATETEVGRFERGEEVGLA
Ga0126314_102683111	3300010042	Serpentine Soil	LVWRVKLVAELETGVATETEVARFERDEVAGLADLGLSARLERVTGLA*
Ga0126310_114354841	3300010044	Serpentine Soil	VPKLVWRVKLVAELRPGVMTETEIARIERGAAVGVAELGLRLDEAKQLTA
Ga0126310_114655421	3300010044	Serpentine Soil	VPKLVWRVKLVAELEPGVTTETEVACLERGEEAGL
Ga0126310_116286262	3300010044	Serpentine Soil	VAKLVWRVKLVAELEPGVVTETELARIERDAQAGL
Ga0126311_104931531	3300010045	Serpentine Soil	VPKLVWRVKLVAELQPGVMTETEVARMERSEAVGLAELGLRLDEAKQLTAA
Ga0126311_107410432	3300010045	Serpentine Soil	VPKLVWRVKLVAELEPGVTTETEVACLERNEEAGLADLGLRLD
Ga0126320_10004032	3300010146	Soil	VPKLVWRVKLVAELRPGVTTETEGARIERSEAGGLAEL
Ga0126320_10945721	3300010146	Soil	VTKLVWRVKLVTELQAEEPTEVELTCFERDEQVGLADLGLSLAEAKQLTATQAG
Ga0126306_102909131	3300010166	Serpentine Soil	VPKLVWRVKLVAELQTGVTTETEVARIERGEEAGLADLGLRLD
Ga0074045_100618271	3300010341	Bog Forest Soil	MVWRVKLVAEQEFGFTTEVEVARLERDEQAGLADLGLR
Ga0134128_121568272	3300010373	Terrestrial Soil	VPKLVWRVKLVAELQAGVTTETEVALIERGEEAGLADLGLRLDEAKQ
Ga0105239_108048471	3300010375	Corn Rhizosphere	VVKLRWRVKLVAEWPSGVITETELACIERDQQTGLADF
Ga0134123_132944432	3300010403	Terrestrial Soil	VPKLVWRVKLVAELRPGVMTETEVARIERDEQTGLADLGLRLDEAK
Ga0151489_11916452	3300011106	Soil	VWRVKLVTELEAGETTEIEVARIERDEQASLGALVHMQD*
Ga0105246_100366481	3300011119	Miscanthus Rhizosphere	VAKLVWRVKLAAELEPGVATETEVARFERDEVVGLADLGLR
Ga0150985_1006448151	3300012212	Avena Fatua Rhizosphere	VPKLVWRVKLVAELRPGVMTETEVARIERDEQAGLA
Ga0150985_1014194873	3300012212	Avena Fatua Rhizosphere	VAKLVWRVKLVAELQAGVTTETEVARIKRGEEAGLADLGLRLNEAKQLTGA
Ga0150985_1034923983	3300012212	Avena Fatua Rhizosphere	VPKLVWRVKLVAELQAGVTTETEVARIERGEEAGLAD
Ga0150985_1086877771	3300012212	Avena Fatua Rhizosphere	VGVRGATPVPKLVWRVKLVTELEPGVATETEVARIERGEAAGLADLGLR
Ga0150985_1112702962	3300012212	Avena Fatua Rhizosphere	VAKLVWRVKLVAELQAGVTTETEVARIERREEAGLADLGLRLDE
Ga0150985_1139445192	3300012212	Avena Fatua Rhizosphere	MQGYVLGSRNESKLARKMVWRVKLVAELEPGSTTEVEVACLERDGRAGLADLGLRLAESLTRID*
Ga0150985_1142281412	3300012212	Avena Fatua Rhizosphere	VAKLVWRVKLVAELEPGVATETEVARFERDEVVGLADLGLRLEEAKRRSG*
Ga0150985_1158264981	3300012212	Avena Fatua Rhizosphere	VPKLVWRVKLVTELQPGVTTETEVACLERNDEADLA
Ga0150985_1196376411	3300012212	Avena Fatua Rhizosphere	VSKLVWRVKLVAELQPGVTTETEVARIERDEQANLAELVPEFA
Ga0150985_1211651181	3300012212	Avena Fatua Rhizosphere	VSKLVWRVKLVAELEPGMTTETEVAWIERGERPAWRTSGS
Ga0150984_1032763162	3300012469	Avena Fatua Rhizosphere	VAKLVWRVKLVAELEPGVVTETELARIERDAQAGLAELGLQLDEAKRLT
Ga0150984_1115499011	3300012469	Avena Fatua Rhizosphere	LGSRDEDERVAKLLWRVKLVAELQPGVTTETEVARIERDEQANLA
Ga0150984_1148506373	3300012469	Avena Fatua Rhizosphere	VAKLVWRVKLVAELQPGVTTETEVARIERTEEAGLAELGLRLEEAKQL
Ga0150984_1197211051	3300012469	Avena Fatua Rhizosphere	VLKLVWRVKLVAELQAGVTTETEVARIERGEEAGLA
Ga0150984_1225960392	3300012469	Avena Fatua Rhizosphere	VPNLVWRVKLVAELEPGVATETEVARIERGEAIGLADLGL
Ga0157375_101245014	3300013308	Miscanthus Rhizosphere	VPKLVWRVKLVAELEPGVTSETEVARLERGEEAGL
Ga0182000_103922791	3300014487	Soil	VAKLVWRVKLVAELRPGAETEVEVARIERGVEAGLADLGLRLDEAKESMQTSGG*
Ga0182001_100879711	3300014488	Soil	VPKLVWRVKLVAELRPGVMTETEVARIERDEQAGLAELGLQLAEAK
Ga0182001_101782332	3300014488	Soil	VPKLVWRVKLVAELQAGVTTETEVACIERGEEASLADLGLRLDEA
Ga0157379_107902861	3300014968	Switchgrass Rhizosphere	VPKLVWRVKLVAELRPGVTTEIEVARIERGEAVGLAELG
Ga0157376_107387111	3300014969	Miscanthus Rhizosphere	VWRVKLVAELQPGVTTETEVARIERDDEVRPAELG
Ga0182007_103687392	3300015262	Rhizosphere	VPKLVWRVKLVAELQAGVTTETEVTRIERSEEAGLADLGLRL
Ga0187883_103270393	3300018037	Peatland	MWRVNWVAEFESGETTEVEVARLERDEQAVRADFGLRL
Ga0187851_103511641	3300018046	Peatland	VPKLVWRVKLVAEFRAGATTEVEVARIERDEQAGLYDLGLHL
Ga0066655_113411881	3300018431	Grasslands Soil	LSSRDEGGLVPKLVWRVKLVAELEPGLTTEVEVARRERDAQAGLADLGLRLAEAKRL
Ga0066662_128282411	3300018468	Grasslands Soil	VPKLVWRIKLVPELRLGVVTGTEVARIDRDPQADLADLGL
Ga0190270_104940443	3300018469	Soil	VAKLVWQVKLVAELEPGVATETEVARFERDEVAGLADLGL
Ga0190273_118325682	3300018920	Soil	VPKLVWRVKLMAEPGPGVATETEVARIERGEEVGLAGL
Ga0193599_11516411	3300018946	Soil	GRRGPVPKLVWRVKLVAELEPGVATETEVARIERGEEVGLAELGLRL
Ga0190264_109032053	3300019377	Soil	VAKLVWRVKLVAELEPGVATETEVARLERGEEAGLADLGLRLEEAKRLTA
Ga0193726_11995962	3300020021	Soil	VTKLVWRVKLVTELEAGETTEIEVARIERDEQATLADLGLRLS
Ga0210400_102606251	3300021170	Soil	VPKPVWWVKLVTELRPGEVTETKVARVQRDEHAGIADLGLRLTET
Ga0210400_106518411	3300021170	Soil	VPKLVWRRVKLVADLRPGEVTETEVARVERDEHAGI
Ga0213882_100593981	3300021362	Exposed Rock	VANLVWRVRLVAELEPGVVSETEVARIVRDEQASLAKL
Ga0213881_100646962	3300021374	Exposed Rock	VANLVWRVRLVAELEPGVVSETELARIVRDEQASLAELGL
Ga0213874_100465061	3300021377	Plant Roots	VAKLVWRVKLVAERQPGVTTETELARIERPEQAALAELGLLDRLISTR
Ga0210389_112735971	3300021404	Soil	VPNLVWRVKLVAELEPGLTTEVEVARLERDEQPGLADLGL
Ga0210389_115261691	3300021404	Soil	VPKLVWRVKLEAELRPGEVTETEVARVERDEHAGIADLGLRLTETK
Ga0210387_102548722	3300021405	Soil	VPNLVWRVKLVAELEPGLTTEVEVARLERDEQASLA
Ga0210387_110256472	3300021405	Soil	VPKLVWRVTLVAELRPGEVTETEVARIERDEQADTADLGLRLTET
Ga0210387_117318422	3300021405	Soil	AELVWRVKLVAELRPGEVTETEVARVERDEQAGIRCRRYR
Ga0213871_101330232	3300021441	Rhizosphere	VAKLVWRVKLVAETRPGVTTETEVARTERDEEAGLAG
Ga0208357_11285082	3300025703	Arctic Peat Soil	MGSRDEGERVPKLVWRVKLVAEFETGERSEVEVARLERDEQAGLADLGLRLAE
Ga0209584_100381401	3300025878	Arctic Peat Soil	MGSRDEGELVPKLAWRVKVVAEFESGETTEVEVAHLERDVQVGLADLGPRLADRWLRVSAFP
Ga0209584_103263311	3300025878	Arctic Peat Soil	MGSRDEGELVPKLVWRVKLVAELESGETTEVEVAHLERDVQVGLADLGLRLAEAKQLDDQADP
Ga0207710_100886993	3300025900	Switchgrass Rhizosphere	VPKLMWRVKLVAELRPGVMTETEVARIERDEQAGLAELGLQLAEA
Ga0207688_102135281	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VSKLVWRVKLVAELEPGVTTETEVACLKRGEEAGLADL
Ga0207688_103623581	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VPKLVWRVKLVAELQAGVTTETEVTRVERSEEAGL
Ga0207663_117055212	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VAKLVWRVKLVAELQPGVATETEVARIERYEEAGLADLGL
Ga0207664_105700141	3300025929	Agricultural Soil	VAKLVWRVKLVAELQPGVATETEVARIERDEEAGLAD
Ga0207711_108757612	3300025941	Switchgrass Rhizosphere	VPKLVWRVKLVAELQAGVTTETEVARIERGEEAGLAELGLRLDEAKQ
Ga0207668_120984932	3300025972	Switchgrass Rhizosphere	VAKLVWRVKLVAELQAGVTTETEVARIERGEEAGL
Ga0207703_101488881	3300026035	Switchgrass Rhizosphere	VPKLVWRVKLVAELQAGVTTETEVARIERGEEAGLAELGLRLDEAK
Ga0207639_115421902	3300026041	Corn Rhizosphere	LVWRVKLVAELEPGVATETEVVRFERDEVVGLADLGLRV
Ga0207678_107437931	3300026067	Corn Rhizosphere	VPKLVWRVKLVAELRPGVMTETEVARIERDEQAGLAELGLQLAEAKQL
Ga0207708_113868292	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VPKLVWRVKLVAELQAGVTTETEVARIERGEEAGLAELGLRL
Ga0207648_103647701	3300026089	Miscanthus Rhizosphere	VPKLVWRVKLVAELQAGVTTETEVARIERGEEAGLA
Ga0207675_1025141141	3300026118	Switchgrass Rhizosphere	VPKLVWRVKLVAELRPGVITETEVARIERDEQAGLAEL
Ga0209330_10923372	3300027619	Forest Soil	VGLVQLVWRVKLVAELRPGVMIESEVARIERDEHAGLA
Ga0209461_101465311	3300027750	Agave	MDLVPKLVWRVKLVAELRPGVMTETEVARIERDEQAGLADLGLQ
Ga0209656_103425852	3300027812	Bog Forest Soil	MGYVWSSRDEGELMPKMVWRVKLVAEPEPGLTTEVEVARFERDEQAGLADLGLRLA
Ga0209488_111554091	3300027903	Vadose Zone Soil	VPNLVWRVKLVAEFETGETTEVEVARLERDEQAGLADLG
Ga0247828_105897032	3300028587	Soil	VPKLVWRVKLVAELEPGVATETEVARIERGEEVGLAELGLRLEEAKAKRCWTP
Ga0307276_102210722	3300028705	Soil	VPKLVWRVKLVAELEPGVTTETEVACLERGEEAGLADLGLRLD
Ga0302222_100443221	3300028798	Palsa	MGSRDEGKLVPKLVWRVKLVAEFETGETTEVEVARLERDEQAGLADLGLRLDEAADSRDT
Ga0311339_114507681	3300029999	Palsa	MGSRDEGKLVPKLVWRVKLVAEFETGETTEVEVARLERDEQAVLADLGLR
Ga0272436_10312565	3300030523	Rock	VAKLVWRVKLVTERQPGVTTETELACIERDEQAGLADLGLSL
Ga0210271_106651494	3300030545	Soil	AKMVWRLKLVAELGAGSTAEVEVARFERDEQAGLADLGLRLAEAKQIEGMQTCGGASG
Ga0308189_105111311	3300031058	Soil	VPKLVWRVKLVAELEPGVATETEVARIERDEEAGLADLGLRLEE
Ga0308201_103277091	3300031091	Soil	VAKLLWRVKLVAELQPGMTTETEVARIERDEDANLAELGLR
Ga0170824_1091434872	3300031231	Forest Soil	MGSRDEGELVPKLVWRVRLVAEFETGETTEVEVARLERDEHAGLAGSVRARAKQV
Ga0302325_109652162	3300031234	Palsa	MGSRDEGELVPKLVWRVKLVAEFETGETTEVEVARLERDEQAGLADLGLRLAEAKQMT
Ga0302325_131414372	3300031234	Palsa	VVLVAKLVWRVKLVAQLRPGVSTETEVARIERDDRVGLA
Ga0272429_10766003	3300031449	Rock	VLKLVWRVKLEAELPAGVTTEVEVARLERDEQAGLAELGLRLAEAKQ
Ga0272429_12375001	3300031449	Rock	VPKLAWRVKLVAELRPGVTTETEVAQIEREEQAGVAELGCQVTG
Ga0272429_12470331	3300031449	Rock	VAKLVWRVKLVTERQPGVTTETELACIERDEQAGLAD
Ga0272426_11779041	3300031451	Rock	VPKLVWRVKLVAELRPGVTTETEVARIERDEQAGLAELGLRLAE
Ga0272425_10335354	3300031453	Rock	VPKLVWRVKLVAELRPGVTTETEVACIERDEQAGLAELELPLV
Ga0272425_11848471	3300031453	Rock	VAKLKWRVRLVTERHPGAVTETELACIERDEGIGVADLGLRLD
Ga0272427_10914961	3300031454	Rock	VTKLMWRVMLVAELHPGMTTETELACIERDEEVGLA
Ga0272427_10997701	3300031454	Rock	VAKLVWQVKLAAELEPGVVTETELARIERDEQAGL
Ga0272427_11354062	3300031454	Rock	VPKLVWRVKLVAELEPGVATETEVARFERDEEAGLADLGLRLEETKRLTA
Ga0272427_11994462	3300031454	Rock	VSKLLWRVKLAAERQPGVTTETELACIERDAQAGLADLGLSL
Ga0272430_10667681	3300031460	Rock	VSKLLWRVKLVAERQPGVTTDIEFAGIERDAQAGLADLGVCK
Ga0272432_10635191	3300031470	Rock	VPKLVWRVKLVAELRPGVMTETEVARIERDEQAGLAE
Ga0272432_10640122	3300031470	Rock	MAKLVWRVKLVAELQAEVTTEAEVGRLERDEQAVRDR
Ga0272432_10908396	3300031470	Rock	VPKLVWRVKLVAELRPGVMTETEVARIERDEQAGLAELGLR
Ga0272437_10583071	3300031472	Rock	VPKLVWRVKLIAELRPGVMTEAEVARIERDELACLAELGLRLDETKQ
Ga0272437_11495831	3300031472	Rock	VSKLLWRVKLVAERQPGVTTETELACIERDAQAGLAD
Ga0170818_1068576551	3300031474	Forest Soil	RDEGELVPKLVWRVRLVAEFETGETTEVEVARLERDEHAGLAGSVRARAKQV
Ga0272428_10357021	3300031520	Rock	VAKLKWRVKLVAERHPGVTTKTELACIGRDEDVGLADLGLRLGE
Ga0272428_11767651	3300031520	Rock	VAKLVWRVKLVAELRPGVTTETEVARIERDEQAGLAELGLRLA
Ga0272428_12111082	3300031520	Rock	VKLVAELRPGVMTETEVARIERDEQAGLAELGLRLAEAKQ
Ga0272428_14045991	3300031520	Rock	VAKLVWRVKLVAELRPGVMTETEVARIERDEQASVAEL
Ga0302322_1024648101	3300031902	Fen	MGSRDEGERVPKLVWRVNLVAEFETGETTEVEVARLERDEQAGLADLGLRLAEAK
Ga0308175_1031920001	3300031938	Soil	VAKLVWRVRLVAELEPGVVTETELARIERDAQASLAELGLRRDEA
Ga0307415_1015563902	3300032126	Rhizosphere	MQISNPPGSRKEGGLVPKLVWRVKLVAELEPGVTEETEVACLERGEEAGLADLGL
Ga0272424_12712671	3300032162	Rock	LPKLVWRVKLIAELRPGVMTETEVARIERDEQAGLAELGLRL
Ga0272423_10200701	3300033168	Rock	VPKLVWRVKLVAELRPGVTTETEVTRIERDEQAGLVEL
Ga0272423_10602033	3300033168	Rock	VPKLVWRVKLVAELRPGVMTETEVARIERDEQAGLAEL
Ga0272431_102080902	3300033181	Rock	VPKLVWRVKLVAELRPGVMTETEVARIERDEQAGL
Ga0272431_103716221	3300033181	Rock	VPKLVWRVKLDAELRPGVTTETEVACIERDEQAGLA
Ga0334790_057314_1266_1418	3300033887	Soil	LGSRDEGELVAKLVWRVKLVTELEAGETTEVEVARIECDEQAGLADLGLRL
Ga0334918_064204_1_135	3300034000	Hypolithic Biocrust	VPKLVWRVKLVAELEPGVATETEVARIERGEEAGLAELGLGLEEV
Ga0334936_112846_3_110	3300034007	Biocrust	VPKLLWRVKLVAELEPGVATETEVARIERGEEAGLA
Ga0370485_0193695_2_124	3300034358	Untreated Peat Soil	MPKVVWRVKLVAELHAGEPTEVELACFERDEQVGLADLGLS
Ga0334931_143605_1_132	3300034377	Sub-Biocrust Soil	MGLVPKLVWRVKLVAELRPGVMTETEVARIERDEQAGLADLGLR

Hidden Markov Model


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