Metagenome Family F041829

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041829
Family Type	Metagenome
Number of Sequences	159
Average Sequence Length	87 residues
Representative Sequence	MTLLVKDANTTVQSLSTEVDGNGNLVPVHAPAATNAQGVSTPVGPQNPLPVMNAAGAAASDGSGTLATGGSAQTLFGGIVPVNGFL
Number of Associated Samples	137
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.42 %
% of genes near scaffold ends (potentially truncated)	92.45 %
% of genes from short scaffolds (< 2000 bps)	92.45 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.277 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (21.384 % of family members)
Environment Ontology (ENVO)	Unclassified (35.849 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.509 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.63% β-sheet: 21.05% Coil/Unstructured: 76.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF03237	Terminase_6N	50.94
PF03592	Terminase_2	1.26
PF07077	DUF1345	0.63
PF04586	Peptidase_S78	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	1.26
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	0.63
COG4291	Uncharacterized membrane protein	Function unknown [S]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.28 %
Unclassified	root	N/A	15.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.28 %
Unclassified	root	N/A	15.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.28 %
Unclassified	root	N/A	15.72 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	57.86 %
Unclassified	root	N/A	15.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.26 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	50.94 %
Unclassified	root	N/A	15.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.26 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.63 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.63 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	38.36 %
Unclassified	root	N/A	15.72 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.29 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	3.77 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.26 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.26 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.63 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.63 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	38.36 %
Unclassified	root	N/A	15.72 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	3.77 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.26 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.26 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.63 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.63 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.63 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.63 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	38.36 %
Unclassified	root	N/A	15.72 %
Ruegeria	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria	3.77 %
Beijerinckia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia	1.26 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.26 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.63 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.63 %
Methylomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomicrobium	0.63 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.63 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	38.36 %
Unclassified	root	N/A	15.72 %
unclassified Ruegeria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria	3.77 %
Beijerinckia mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → Beijerinckia mobilis	1.26 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.26 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.63 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.63 %
Methylomicrobium agile	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomicrobium → Methylomicrobium agile	0.63 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	38.36 %
Unclassified	root	N/A	15.72 %
Ruegeria sp. HKCCA4812	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCA4812	3.77 %
Beijerinckia mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → Beijerinckia mobilis	1.26 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.26 %
unclassified Microbacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium	0.63 %
Kribbella catacumbae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella catacumbae	0.63 %
Archangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium	0.63 %
Methylomicrobium agile	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomicrobium → Methylomicrobium agile	0.63 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	38.36 %
Unclassified	root	N/A	15.72 %
Ruegeria sp. HKCCA4812	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCA4812	3.77 %
Beijerinckia mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → Beijerinckia mobilis	1.26 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.26 %
Microbacterium sp. CF335	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium → Microbacterium sp. CF335	0.63 %
Archangium gephyra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium gephyra	0.63 %
Kribbella catacumbae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella catacumbae	0.63 %
Methylomicrobium agile	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomicrobium → Methylomicrobium agile	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100806785	All Organisms → cellular organisms → Bacteria → Proteobacteria	819	Open in IMG/M
3300002906\|JGI25614J43888_10213224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300004006\|Ga0055453_10051099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1130	Open in IMG/M
3300004080\|Ga0062385_10293450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	928	Open in IMG/M
3300004080\|Ga0062385_11122226	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300004153\|Ga0063455_100072772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1293	Open in IMG/M
3300004480\|Ga0062592_102243100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300004635\|Ga0062388_102142850	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005093\|Ga0062594_102832409	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300005167\|Ga0066672_10765895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	611	Open in IMG/M
3300005175\|Ga0066673_10867834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomicrobium → Methylomicrobium agile	514	Open in IMG/M
3300005435\|Ga0070714_100499046	Not Available	1160	Open in IMG/M
3300005437\|Ga0070710_10400680	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300005445\|Ga0070708_100785733	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300005451\|Ga0066681_10647216	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300005458\|Ga0070681_10154273	All Organisms → cellular organisms → Bacteria	2222	Open in IMG/M
3300005535\|Ga0070684_100287283	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300005543\|Ga0070672_102133715	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300005564\|Ga0070664_101572524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	623	Open in IMG/M
3300005569\|Ga0066705_10984077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium → Microbacterium sp. CF335	500	Open in IMG/M
3300005575\|Ga0066702_10669541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	620	Open in IMG/M
3300005577\|Ga0068857_101749526	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300005893\|Ga0075278_1064833	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300006028\|Ga0070717_10738026	All Organisms → cellular organisms → Bacteria → Proteobacteria	895	Open in IMG/M
3300006028\|Ga0070717_11040954	All Organisms → cellular organisms → Bacteria → Proteobacteria	745	Open in IMG/M
3300006031\|Ga0066651_10690613	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300006237\|Ga0097621_101129760	All Organisms → cellular organisms → Bacteria → Proteobacteria	736	Open in IMG/M
3300006638\|Ga0075522_10007121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	7740	Open in IMG/M
3300006794\|Ga0066658_10550348	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300006794\|Ga0066658_10781898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella catacumbae	536	Open in IMG/M
3300006796\|Ga0066665_11067993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300006797\|Ga0066659_10816604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCA4812	773	Open in IMG/M
3300006804\|Ga0079221_11191674	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300006871\|Ga0075434_102586810	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300006914\|Ga0075436_101550127	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium gephyra	503	Open in IMG/M
3300006954\|Ga0079219_12028584	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300009012\|Ga0066710_102898352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCA4812	673	Open in IMG/M
3300009012\|Ga0066710_103592324	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300009088\|Ga0099830_11819211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300009093\|Ga0105240_11931487	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300009137\|Ga0066709_103653940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300009143\|Ga0099792_11216812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300009156\|Ga0111538_11382255	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300009792\|Ga0126374_11797248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300010042\|Ga0126314_11398498	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300010048\|Ga0126373_12672660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300010371\|Ga0134125_12685470	Not Available	541	Open in IMG/M
3300010373\|Ga0134128_12201505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	607	Open in IMG/M
3300010379\|Ga0136449_102113529	Not Available	826	Open in IMG/M
3300010379\|Ga0136449_102992486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300010396\|Ga0134126_10825568	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300010396\|Ga0134126_11681091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300010401\|Ga0134121_12616119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	548	Open in IMG/M
3300011270\|Ga0137391_11182701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M
3300011444\|Ga0137463_1301125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	587	Open in IMG/M
3300012189\|Ga0137388_10862524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	838	Open in IMG/M
3300012198\|Ga0137364_10525024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	890	Open in IMG/M
3300012200\|Ga0137382_10495470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	868	Open in IMG/M
3300012202\|Ga0137363_11574804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	549	Open in IMG/M
3300012205\|Ga0137362_10509036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1041	Open in IMG/M
3300012209\|Ga0137379_11023972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCA4812	731	Open in IMG/M
3300012209\|Ga0137379_11025173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	730	Open in IMG/M
3300012211\|Ga0137377_11034487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	752	Open in IMG/M
3300012285\|Ga0137370_10954489	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300012349\|Ga0137387_10513540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	870	Open in IMG/M
3300012351\|Ga0137386_10583756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	804	Open in IMG/M
3300012357\|Ga0137384_10583955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	913	Open in IMG/M
3300012359\|Ga0137385_11216565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCA4812	615	Open in IMG/M
3300012361\|Ga0137360_10099848	Not Available	2218	Open in IMG/M
3300012361\|Ga0137360_10817016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	802	Open in IMG/M
3300012362\|Ga0137361_11232984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	671	Open in IMG/M
3300012362\|Ga0137361_11494888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300012363\|Ga0137390_10765635	Not Available	925	Open in IMG/M
3300012363\|Ga0137390_11260849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	685	Open in IMG/M
3300012582\|Ga0137358_10621101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	724	Open in IMG/M
3300012909\|Ga0157290_10471142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300012917\|Ga0137395_10571678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCA4812	816	Open in IMG/M
3300012923\|Ga0137359_10915494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	755	Open in IMG/M
3300012929\|Ga0137404_10603028	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300012951\|Ga0164300_11077349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300012957\|Ga0164303_11328007	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300012961\|Ga0164302_11268241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	593	Open in IMG/M
3300012977\|Ga0134087_10695101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300012988\|Ga0164306_11744819	Not Available	540	Open in IMG/M
3300013308\|Ga0157375_13313654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300014501\|Ga0182024_12869273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300017822\|Ga0187802_10360790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	572	Open in IMG/M
3300017934\|Ga0187803_10071571	Not Available	1365	Open in IMG/M
3300017943\|Ga0187819_10481239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	709	Open in IMG/M
3300018086\|Ga0187769_11483036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300018433\|Ga0066667_11459999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	603	Open in IMG/M
3300018482\|Ga0066669_10705113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	889	Open in IMG/M
3300018482\|Ga0066669_12332961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300018482\|Ga0066669_12434947	Not Available	502	Open in IMG/M
3300019786\|Ga0182025_1200054	All Organisms → cellular organisms → Bacteria	2112	Open in IMG/M
3300019881\|Ga0193707_1166557	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300019888\|Ga0193751_1139781	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300021388\|Ga0213875_10004178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7986	Open in IMG/M
3300021401\|Ga0210393_10887400	All Organisms → cellular organisms → Bacteria → Proteobacteria	724	Open in IMG/M
3300021420\|Ga0210394_10011622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	8626	Open in IMG/M
3300021420\|Ga0210394_10883689	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300021559\|Ga0210409_10212272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1760	Open in IMG/M
3300021559\|Ga0210409_10488046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → Beijerinckia mobilis	1095	Open in IMG/M
3300022557\|Ga0212123_10272734	Not Available	1199	Open in IMG/M
3300024245\|Ga0247677_1038683	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300025556\|Ga0210120_1063566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	724	Open in IMG/M
3300025664\|Ga0208849_1041930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1416	Open in IMG/M
3300025906\|Ga0207699_10494926	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300025913\|Ga0207695_10546753	Not Available	1039	Open in IMG/M
3300025922\|Ga0207646_11600429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	562	Open in IMG/M
3300025929\|Ga0207664_10158698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1927	Open in IMG/M
3300025929\|Ga0207664_11925470	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300025930\|Ga0207701_10078494	All Organisms → cellular organisms → Bacteria	2989	Open in IMG/M
3300025930\|Ga0207701_10817730	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300025930\|Ga0207701_11354989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300025932\|Ga0207690_10785988	Not Available	786	Open in IMG/M
3300025945\|Ga0207679_12123615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	510	Open in IMG/M
3300026078\|Ga0207702_11982949	Not Available	573	Open in IMG/M
3300026088\|Ga0207641_12449110	Not Available	521	Open in IMG/M
3300026095\|Ga0207676_11794280	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300026116\|Ga0207674_12109461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	527	Open in IMG/M
3300026316\|Ga0209155_1079187	Not Available	1229	Open in IMG/M
3300026325\|Ga0209152_10302649	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300026527\|Ga0209059_1291274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300026530\|Ga0209807_1327123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300026550\|Ga0209474_10182369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1349	Open in IMG/M
3300026552\|Ga0209577_10697797	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300026557\|Ga0179587_10288491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1056	Open in IMG/M
3300027667\|Ga0209009_1036321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1221	Open in IMG/M
3300027815\|Ga0209726_10302687	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300027862\|Ga0209701_10162350	All Organisms → cellular organisms → Bacteria → Proteobacteria	1356	Open in IMG/M
3300027882\|Ga0209590_10577606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCA4812	724	Open in IMG/M
3300027986\|Ga0209168_10643051	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300028379\|Ga0268266_11630514	Not Available	621	Open in IMG/M
3300028536\|Ga0137415_10723508	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300028536\|Ga0137415_10968132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	662	Open in IMG/M
3300030580\|Ga0311355_11588643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	562	Open in IMG/M
3300031028\|Ga0302180_10351717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	747	Open in IMG/M
3300031234\|Ga0302325_11924931	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300031234\|Ga0302325_12762228	Not Available	577	Open in IMG/M
3300031236\|Ga0302324_101000560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1136	Open in IMG/M
3300031236\|Ga0302324_101017065	Not Available	1125	Open in IMG/M
3300031525\|Ga0302326_12896607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300031672\|Ga0307373_10380634	Not Available	833	Open in IMG/M
3300031715\|Ga0307476_10687245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → Beijerinckia mobilis	758	Open in IMG/M
3300031938\|Ga0308175_102346123	Not Available	598	Open in IMG/M
3300031962\|Ga0307479_11522810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300032002\|Ga0307416_101331358	All Organisms → cellular organisms → Bacteria → Proteobacteria	824	Open in IMG/M
3300032160\|Ga0311301_12554671	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300032180\|Ga0307471_103337869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	569	Open in IMG/M
3300032805\|Ga0335078_12472105	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300032895\|Ga0335074_10784671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	894	Open in IMG/M
3300032895\|Ga0335074_11625729	Not Available	503	Open in IMG/M
3300032898\|Ga0335072_10256977	Not Available	2002	Open in IMG/M
3300033134\|Ga0335073_11637813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.42%
Host-Associated	Host-Associated	12.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.50%
Plants	Host-Associated → Plants	12.58%
Aquatic	Environmental → Aquatic	6.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.55%
Freshwater	Environmental → Aquatic → Freshwater	4.40%
Peat	Environmental → Terrestrial → Peat	4.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.77%
Marine	Environmental → Aquatic → Marine	1.26%
Roots	Host-Associated → Plants → Roots	1.26%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.63%
Sediment	Environmental → Aquatic → Sediment	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.75%
Loam	Environmental → Terrestrial → Soil → Loam	10.06%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.40%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.14%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.26%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.63%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.63%
Clay	Environmental → Terrestrial → Soil → Clay	0.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.63%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.66%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.89%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.89%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.26%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.26%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.26%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.63%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.63%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.63%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.63%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.63%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.40%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.14%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.52%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.89%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.89%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.26%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.26%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.26%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.26%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.63%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.63%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.63%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.63%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.63%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.63%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.63%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.63%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300004006	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005893	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_202	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300025556	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025664	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1008067852	3300002245	Forest Soil	MTLLVKDANTTVQSLSTVTDGNGNLVPVHALTATNAQGVATPVGPQNPLPVVNTAASAASDGSGTVASGGNAQTLFGGAVPANGFLVQNNSTAALWICDTGAASNGGASIQLAA
JGI25614J43888_102132241	3300002906	Grasslands Soil	MTLLVKDANTTIQPLATEIDGNGNLVPVHAPASTNAQGVSSPVGPQNPLPVINTAGATASDGSGTVATGGSAQTLFGGAAPANGFL
Ga0055453_100510991	3300004006	Natural And Restored Wetlands	MTLLVKDANTAIQALATALDGNGSLVPVHVPAARNVQGVAIPVGPQNPLPVISTAAALASDGSGTVATGGAPQTLFGGIVPDNGFLVQNNSSAELWISDA
Ga0062385_102934501	3300004080	Bog Forest Soil	MSLLVKDANTTVQSLSMEVDGSGNLVPLHAPASVSAQGVASPVGPANPLPVINTAGAAASDGSGTVATGGSPQTLFGGAVPMNGF
Ga0062385_111222261	3300004080	Bog Forest Soil	MTLLVKDANTTVQSLSTEVDGNGNLVPVHAPAATDAQGVSTPVGLQNPLPVINTAGAV
Ga0063455_1000727721	3300004153	Soil	MTLLVKDANTAVQALATTLDGNGSLVPVHVPAASNTQGVATPVGPQNPLPVVNTAATAAGDGSGAVATGGGAQTLFGGIVPDNGFLVQNNSSAA
Ga0062592_1022431002	3300004480	Soil	MTLLVKDANTAVQVLATTLDGNGSLVPVHVSAASNAQGVATPVGPQNPLPVVNTAATAAGDGSGAVAIGGGAQTLFGGIVPDNGFLVQNNSSAALW
Ga0062388_1021428501	3300004635	Bog Forest Soil	MTLLVKDANTTVQSLSTEVDGSGNLVPVHAPAATNAQGISTPVGPQNPLPVINA
Ga0062594_1028324091	3300005093	Soil	MTLLVKDANTTVQSLATGVDGAGNLVPLHAPAATNAQGIAGAVSPQNPMPVINTAADAASDG
Ga0066672_107658952	3300005167	Soil	MTLLVKDANTTVQSLATAVDGKGSLVPVHAPALTDALGVSTPVGPQNPLPVINTAGALASDGSGTVGTGGSAQTLFGGIVPVNGFVVQNNS
Ga0066673_108678341	3300005175	Soil	MTLLVKDANTTIQSLSTVTDGSGNLVPLHAPAVTNAQGVASPAGPQNPLPVVNTAGSAASDGSGTVASGGNAQTLFGGAVPANGFLVQNNSSAVLWICDTGAASNGGASLQLAANGGIFATPSGYKPAGPVSL
Ga0070714_1004990462	3300005435	Agricultural Soil	MTLLVKDANTSVQSLATVADANGNLVPAHAPASTNAQGVAAPVGPQNPLPVVNTAGNAASDGSGTLA
Ga0070710_104006801	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTLLVKDANTSVQSLATVADANGNLVPAHAPASTNAQGVAAPVGPQNPLPVVNTAGNAASDGS
Ga0070708_1007857332	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTLLVKDANTTVQSLSTVTDGSGNLVPLHAPAATNAQGVATPAGPLNPLPVVNTAATAASDGSGALASGGNA*
Ga0066681_106472162	3300005451	Soil	MTLLVKDANTTVQSLATEVDGNGNLVPVHAPATTNAQGVSTAIGPQNPLPVINAAGTVASDGSGTLATGGSAQTL
Ga0070681_101542732	3300005458	Corn Rhizosphere	MTLQVKDANTVVQSLATVSDGSGNLVPVHAPASTNAQGVAIPVGSQNPLPVINTAGAAASDGSGTVATGGSAQTLFGGIVPVNGYLVQNNSNAALWVCDVGAAS
Ga0070684_1002872831	3300005535	Corn Rhizosphere	MTLLVKDANTAVQALATMFDGNGSLVPVHVPAASNGQGVATPVGPQNPLPVVNTAATAAGDGSGTVATGGVAQTLFGGIVPDNGFLVQNNSSAALWISDV
Ga0070672_1021337152	3300005543	Miscanthus Rhizosphere	MTLLVKDANTAVQALATMFDGNGSLVPVHVPAASNGQGVATPVGPQNPLPVVNTAATAAGDGSGTVATGGAAQTLFGGIVPDNGFLVQNN
Ga0070664_1015725241	3300005564	Corn Rhizosphere	MTLLVKDANTAVQALATTLDGNGSLVPVHIPAASNAQGVAMPVGLQNPLPVVNTAATAAGDGSGTVATGGAAQTLFGGIVPDNGFLVQNNSSAAL
Ga0066705_109840771	3300005569	Soil	MTLLVKDANTTVQSLSTVVDGNGNLVPAHAPATTSAQGVATPVGPQNPLPVVNTAGSAAGDGSGTVAAGGTAQTLFGGAVPANGFLVQNNSSAALWICDTGAAS
Ga0066702_106695412	3300005575	Soil	MTLLVKDANTSVQSLSTVTDGSGNLVPAHATASTNAQGIAAPVGPQNPLPVVNTAGNAASDGSGTLAAGGSAQTLFGGA
Ga0068857_1017495261	3300005577	Corn Rhizosphere	MTLLVKDANTAVQALATMFDGNGSLVPVHVPAASNGQGVATPVGPQNPLPVVNTAATAAGDGSGTVATGGAAQTLFGGIVPDNGFLVQNNSSAALWISDVGIASAGGASIQ
Ga0068852_1027467641	3300005616	Corn Rhizosphere	MTLLVKDANTAVQALATTLDGNGSLVPVHVPAASNGQGVATPVGPQNPLPVV
Ga0075278_10648331	3300005893	Rice Paddy Soil	MTLLVKDANTSVQSLATEIDGSGNLVPLHAVAVTDAQGTATAVGPQNPLPVINTAAAGASDGSGSVAAGGSAQ
Ga0070717_107380262	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTLLVKDANTTSQPLATAVDGSGNLVPVHAPATTDAHGVATAVGAQNPLPVINTAAAAAGDGSGTVATGGSAQTLFGGIVPANGFLLQNNSSAALWV
Ga0070717_110409541	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTLLVKDANTSVQSLATVADANGNLVPAHAPASTNAQGVAAPVGPQNPLPVVNTAGN
Ga0066651_106906132	3300006031	Soil	MTLLVKDANTSVQSLATVTDGNGNLVPAHAPASTNAQGVAAPVGPQNPLPVVNTAGTAASDGSGTLAAGGSAQ
Ga0097621_1011297601	3300006237	Miscanthus Rhizosphere	MTLLVKDANTAVQALATTLDGNGSLVPVHVPAASNTQGVATPVGPQNPLPVVNTAATAAGDGSGAVATGG
Ga0075522_100071219	3300006638	Arctic Peat Soil	MTLLVKDANTTVQPLSTELDGNGNLVPLHATASVSTQGVASPVGPQNPLPVINAAGAPASDGSGTVATGGSPQALFGGAVAANGFLVQNNSSAVLWICDTGIASSGGASVQIAANGGMFTTPSGYKPGGALSLYGGTTGQVFAARRW*
Ga0066658_105503482	3300006794	Soil	MTLLVKDANTTVQSLATGVDGKGNLVPVHAPALTDALGVSTPVGPQNPLPVINTAGALASDGSGTVG
Ga0066658_107818981	3300006794	Soil	MTLLVKDANTTVQSLSTVTDGNGNLVPLHVPAVTNAQGVATAVGPQNPLPVVNTAASAASDGSGTVASGGNAQTLFGGAV
Ga0066665_110679931	3300006796	Soil	MTLLVKDANTTVQSLATGVDGKGNLVPVHAPALTDAQGVSTPVGLQNPLPVINTAGAAASDGSGTVATGGSAQTLFGGIVPANGFVVQNN
Ga0066659_108166041	3300006797	Soil	MTLLVKDANTIVQSLATGVDGKGNLVPVHAPALTDALGVSTPVGLQNPLPVINTAGAAASDGSGTVATGGSAQTLFGGIVPVNWG*
Ga0079221_111916742	3300006804	Agricultural Soil	MTLLVKDANTAVQALGTALDGNGSLVPVHVPAANNAQGVAIPVGPQNPLPVVN
Ga0075434_1025868101	3300006871	Populus Rhizosphere	MTLLVKDANTTVQSLATAVDGNGNLVPLHAPAATDAQGVAGAVGPQNPLPVINVAA
Ga0075436_1015501271	3300006914	Populus Rhizosphere	MTLLVKDANTSVQSLATVADASGNLVPAHAPASTNAQGVAAPVGPQNPLPVVNTAGNAASDGSGTLAAG
Ga0079219_120285841	3300006954	Agricultural Soil	MTLLVKDANTAVQALATTLDGNGSLVPVHIPAASNAQGVAMPVGLQNPLPVVNTAATAAGDGSGTVATGGAAQTLFGGIVPDNGFLVQNNSSAALWISDVGVASAGGASIQIAANGG
Ga0099791_106561971	3300007255	Vadose Zone Soil	MTLLVKDANTSVQSLSTVIDGNGALVPVHTPAAANAQGVASPVGPQNPLPVVNT
Ga0066710_1028983522	3300009012	Grasslands Soil	MTLLVKDANTTVQALATEVDGNGNLVPLHAPATTNTQGVSTPVGPQNPLPVINTAAAPATDGSATLAAGGSPPT
Ga0066710_1035923241	3300009012	Grasslands Soil	MTLLVKDANTIVQSLATGVDGQGNLVPVHAPALTDAQGVSTPIGLQNPLPVINTAGAAAGDGSGTVATGGSAQT
Ga0099830_118192111	3300009088	Vadose Zone Soil	MTLFVKDANTTVQSLATEVDGNGNLVPVHAPAATNAQGVSSAIGPQNPMPVINAAGAVASDGSGTLATGGSAQTLFGGIVPANGFVVQNNSSAAL
Ga0105240_119314871	3300009093	Corn Rhizosphere	MTLQVKDANTVVQSLATVSDGSGNLVPVHAPASTNAQGVAIPVGSQNPLPVINTAGAAASDGSGTVATGGSA
Ga0066709_1036539401	3300009137	Grasslands Soil	MTLLVKDANTAVQSLSTVVDGNGALVPVHAPAAANAQGVASPVGPQNPLPVVNTAAIAASDGSGTVATGGSAQ
Ga0099792_112168121	3300009143	Vadose Zone Soil	VVKSFLLTASTGEQKGSPMTLLVKDANTSVQSLSTVTDGSGNLVPAHAPASTNAQGIAAPVGPQNPLPVVNTAGNAASDGSGTLAAGGSAQTLFGGAVPANGYLVQNNSSAALWISDT
Ga0111538_113822551	3300009156	Populus Rhizosphere	MTLLVKDANTTVQSLATAVDGSGNLVPLHAPAASDAQGIAGAVGPQNPLPVINAAGTAATDGSGTVTAGGSAQLLFGGIV
Ga0126374_117972482	3300009792	Tropical Forest Soil	MTLLVKDANTTVQSLSTVVDGNGALVPLHAPTSTNTQGLAAPVGPQNPLPVINTAGTAASDGSGTV
Ga0126314_113984982	3300010042	Serpentine Soil	MTLLVKDANTAVQALATTLDGNGSLVPVHVPAASNAQGVATPVGPQNPLPVVNTAVTAAGDGSGTVATGGVAQTLFGGIVPDNGF
Ga0126373_126726601	3300010048	Tropical Forest Soil	MTLLVKDANTSVQSLSTEVDGSGNLVPLHAPASVVAGVANPVGPANPLPVVNTAGAAASDGSGSLAAGGSPQTLFGGAVPANGFLVQNNSSAA
Ga0134125_126854702	3300010371	Terrestrial Soil	MTLLVKDANTAVQALATALDGNGNLVPVHVPAASNTQGVAVPVGPQNPLPVVITAAAPASDGSGTVATGGAAQ
Ga0134128_122015051	3300010373	Terrestrial Soil	MTLLVKDANTAVQALATMFDGNGSLVPVHVPAASNGQGVATPVGPQNPLPVVNTAATAAGDGSGTVATGGAAQTLFGGIVPDNGFLVQNNSSAALWISDVGIASAGGASIQIAANGGIFATPSGYKPAGAVSLYG
Ga0136449_1021135291	3300010379	Peatlands Soil	MTLLVKDANTTVQSLSTEVDGNGNLVPVHAPAATNAQGVSTPVGSQNPLPVINAAGAVASDGSGTVATGGSAQALFGGLVPVNGFVVQNNSSAALWI
Ga0136449_1029924862	3300010379	Peatlands Soil	MTLLVKDANTTVQSLSTEVDGNGNLVPVHAPAATNAQGVSTPVGPQNPLPVMNAAGAAASDGSGTLATGGSAQTLFGGIVPVNGFLVQNNSSAVLWLSAVGVAAAGGGRGPRARAG
Ga0134126_108255681	3300010396	Terrestrial Soil	MTLLVKDANTSVQSLATVADASGNLVPAHAPASTNAQGVAAPVGPQNPLPVVNTAGNAASDGSGTLAAGG
Ga0134126_116810911	3300010396	Terrestrial Soil	MTLLVKDANTTVQSLATEPDPSGSLVPVHASASVAQGVATPVGPQNPLPVINTAGSAAVDGSGTVAAGGSAQTLFGGGVPTNGFLVQNNSSAALWICDSGVASNGGASIQVAANGGLFMTPSGYKPAGAVSLFGGTTGQV
Ga0134121_126161191	3300010401	Terrestrial Soil	MTLLVKDANTAVQALATTLDGNGSLVPVHIPAASNAQGVAMPVGLQNPLPVVNTAATAAGDGSGTVATGGAAQTLFGGIVPDNGFLVQNNSSAALWISDVGIASAGGASIQIAANGGIF
Ga0137391_111827012	3300011270	Vadose Zone Soil	MTLFVKDANTTVQSLATEVDSNGNLVPVHAPAATNAQGVATPVGPQNPLPVINTAGAVASDGSGTLATGGSAQTLFGGIVPANGFLVQNNSSAALWISDAG
Ga0137463_13011251	3300011444	Soil	MTLFVKDANTTVQSLATEIDGNGNLVPLHAPAATNAQGISTPVGPQNPLPVINAAGAVASDGSGTLATGGSAQTLFGGIVPSNGFLVQNNSS
Ga0137388_108625241	3300012189	Vadose Zone Soil	MTLLVKDANTTVQSLATEVDGNGNLVPVHAPATTNAQGVSTAIGPQNPLPVINTAGTVASDGSGILATGGSAQALFGGIVPANGFLVQNNSSAALWLSDVGVASAGGASIQLAANGGIFLTPSGYKP
Ga0137364_105250241	3300012198	Vadose Zone Soil	MTLLVKDANTTVQSLSTVTDGSGNLVPAHAPASTNAQGVAAPVGPQNPLPVVNTAGNAASDGSGTLAAGGSAQPLFGGAAPANGYLVQNNSSAALW
Ga0137382_104954702	3300012200	Vadose Zone Soil	MTLLVKDANTTVQSLSTVTDGSGNLVPAHAPASTNAQGVAALVGPQNPLPVVNTAGNAASDGS
Ga0137363_115748041	3300012202	Vadose Zone Soil	VQSLSTVTDGSGNLVPAHAPASTNAQGIAAPVGPQNPLPVVNTAGNAASDGSGTLAAGGSAQTLFGGAVPANGYLVQNNSSAALWISDTGAASNGGGSIQLAPNGGIFMTP*
Ga0137362_105090361	3300012205	Vadose Zone Soil	TGEQKGSPMTLLVKDANTSVQSLSTVTDGSGNLVPAHAPASTNAQGIAAPVGPQNPLPVVNTAGNAASDGSGTLAAGGSAQTLFGGAVPANGYLV*
Ga0137379_110239722	3300012209	Vadose Zone Soil	MTLLVKDANTTVQSLATEVDGNGNLVPVHAPAATNAQGVSTAVGPQNPLPVINAAGAVASDGSGTLATGGSAQTLF
Ga0137379_110251731	3300012209	Vadose Zone Soil	MTLLVKDANTSVQSLSTVIDGNGALVPVHTPAAANAQGVASPVGPQNPLPVVNTAGVAASDGSGTVATGGN
Ga0137377_110344872	3300012211	Vadose Zone Soil	MTLLVKDANTTVQSLATEVDGNGNLVPVHAPATTNAQGVSTAVGPQNPLPVINTAGAAASDGSGTLATGGSAQTLFGGIVPTNGFLVQNNSSAVLWISDVGVASAGGASIQLAANGGIFATASGYKPAGPV
Ga0137370_109544892	3300012285	Vadose Zone Soil	MTLLVKDANTTVQSLATGVDGKGNLVPVHAPALTDAQGVSTPIGPQNPLPVINTAGAAAGDGSGT
Ga0137387_105135401	3300012349	Vadose Zone Soil	MTLLVKDANTTVQSLATEIDGNGNLVPVHAPATTNGQGVSTAVGPQNPLPVINTAGAVASDGSGTLATGGSAQTLFGGIVPVNGFLVQNNSSAVLWILDVGVASAGGASIQLAANVADFTTPT
Ga0137386_105837562	3300012351	Vadose Zone Soil	MTLLVKDANTTVQSLATEVDGNGNLVPVHAPATTNAQGVSTTVGPQNPLPVINAAGAAASDGSGTLATGGSAQTLFGGIVPANGFLVQNNSTVALWISDVGVASPGGA
Ga0137384_105839551	3300012357	Vadose Zone Soil	MTLLVKDANTTVQSLATEIDGNGNLVPVHAPATTNAQGVSTAIGPQNPLPVINAAGTVASDGSGTLATGGSAQTLFGGIVPANGFLVQNNSTAALWISDVGVASAGG
Ga0137385_112165651	3300012359	Vadose Zone Soil	MTLLVKDANTTVQSLATEVDGNGNLVPVHAPATTNAQGVSTAIGPQNPLPVINAAGAVA
Ga0137360_100998481	3300012361	Vadose Zone Soil	MTLLVKDANTTVQSLATEVDGNGNLVPVHAPATTNAQGVSTAVGPQNPLPVINAAGAAASDGSGTLATGGSAQT
Ga0137360_108170161	3300012361	Vadose Zone Soil	MTLLVKDANTSVQSLSTVIDGNGSLVPVHAPAASNAQGVASPVGPQNPLPVVNTAGIAASDGSGTVATGGSAQTLFGGAVPANGFIVQNNSSAA
Ga0137360_114978591	3300012361	Vadose Zone Soil	MTLLVKDANTSVQSLSTVIDGNGALVPVHTPAAANAQGVASPVGPQNPLPVVNTA
Ga0137361_112329841	3300012362	Vadose Zone Soil	MTLLVKDANTSVQSLSTVIDGNGALVPVHTPAAANAQGVASPVGPQNPLPVVNTAGVAASDGSGTVATGGNAQSLFGGAVPANGFIVQNNSS
Ga0137361_114948881	3300012362	Vadose Zone Soil	MTLLVKDANTTTQSLSTVTDGSGNLVPLHAPAVTNAQGVASPAGPQNPLPVVNTAANAASDGSGTVGSGGNAQTLFGGAVPANGFLVQNNSSAILW
Ga0137390_107656351	3300012363	Vadose Zone Soil	MTLFVKDANTTVQSLATEVDGNGNLVPVHAPAATNAQGVSSVVGPQNPLPVINTTGAVASDGSGTIAAGGSAQALF
Ga0137390_112608491	3300012363	Vadose Zone Soil	MTLFVKDANTTVQSLATEVDSNGNLVPVHAPAATNAQGVSTPVGPQNPLPVINTAGTVASDGSGTVATGGSAQTLFGGIVPANGFLVQNNSSAALWICDVGVASAGGASIQLVANGNTFATPSGYKSAGAVSLYGA
Ga0137358_106211012	3300012582	Vadose Zone Soil	MTLLVKDANTSVQSLSTVTDGSGNLVPAHAPASTNAQGIAAPVGPQNPLPVVNTAGNAASDGSGTLAAGGSAQTLFGGAVPANGYLV*
Ga0157290_104711421	3300012909	Soil	MTLLVKDANTAVQALATMFDGNGSLVPVHVPAASNGQGVATPVGPQNPLPVVNTAATAAGDGSGTVATGGAAQTLFGGIVPNNGFLVQNNSSAALWISDVGIA
Ga0137395_105716782	3300012917	Vadose Zone Soil	MTLLVKDANTTVQSLATEVDGNGNLVPVHAPASTNAQGVSTAVGAQNPLPVINTAGAVVSDGSGTVATGGSAQTLFGG
Ga0137359_109154941	3300012923	Vadose Zone Soil	MTLLVKDANTTTQSLSTVTDGSGNLVPLHAPAVTNVQGVASPAGPQNPLPVVNTAGSAASDGSGTVASGGNAQTLFGGAVPANGFLVQNNSSAVL
Ga0137404_106030281	3300012929	Vadose Zone Soil	MTLLVKDANTSVQSLSTVVDGNGNLVPVHAPASSNAQGVAAPVGPANPLPVINTAAAAATDGSGTVATG
Ga0137410_110115132	3300012944	Vadose Zone Soil	MTLLVKDANTTVQSLSTVVDGNGNLVPVHAPASTSAQGVAAPVGPQNPLPVVNTA
Ga0164300_110773491	3300012951	Soil	MTLLVKDANTTVQSLATVTDGSGNLVPAHAPASTNAQGIAAPVGPQNPLPVINTAAAAASDGSGTVATGGSAQLLFGGI
Ga0164303_113280071	3300012957	Soil	MTLLVKDANTTVQSLATAIDGSGNLVPLHAPAVSDAQGIASAVGPQNPLPVINSAAAAASDGSGT
Ga0164302_112682412	3300012961	Soil	ERGSMTLLVKDANTAVQALATTLDGNGSLVPVHVPAASNTQGVATPVGPQNPLPVVNTAATAAGDGSGTVATGGVAQTLFGGIVPDNGFLVQNNSSAALWISDVGIASAGGARC*
Ga0134087_106951011	3300012977	Grasslands Soil	MTLLVKDANTSVQSLSTVIDGNGSLVPVHAPATANTQGVASPVGPQNPLPVVNTAGTAASDGSGTLAAGGSAQTLFGGAVPANGYL
Ga0164306_117448192	3300012988	Soil	MTLLVKDANTAVQALATTLDGNGSLVPVHVPAASNTQGVATPVGPQNPLPVVNTAATAAGDGSGAVAT
Ga0157375_133136541	3300013308	Miscanthus Rhizosphere	MTLLVKDANTAVQALATTLDGNGSLVPVHVPAASNTQGVAVPVGPQNPLPVVNTAAAPASDGSGTVATGGAAQILFGGIVPN
Ga0182024_128692731	3300014501	Permafrost	MTLLVKDANTTVQALSTEVDGSGNLVPMHAPASVSQGVASPVGPTNPLPVINTAGAVASDGSGSVATGGSPQTLFGGTVPANGFLVQNNSSAALWLCDTGIASDGGASIQVAASGGVFATPPGYKPA
Ga0187802_103607902	3300017822	Freshwater Sediment	MTLLVKDANTTIQSLSTETDAGGNLVPLHTPASVAQGVASPVGPANPLPVINTAGAAAGDGSGAVATGGSAQTLFGGAVPANGFLVQNNSSAALWICDTG
Ga0187803_100715712	3300017934	Freshwater Sediment	MTLLVKDANTTVQSLATEVDGNGNLVPVHAPATTNAQGVSIPVGLQNPLPVMNTAGAAASDGSGTVATGGSAQ
Ga0187819_104812392	3300017943	Freshwater Sediment	MTLLVKDANTTVQSLATEVDGYGNLVPVHAPATTNAQGVSIPVGLQNPLPVMNTAGAAASDGSGTVATGGSAQTLFGGIVPVNGFVVQNNSSAALWISDVGVAS
Ga0187769_114830361	3300018086	Tropical Peatland	MTLLVKDANTTVQPLSTEVDSNGNLVPVHAPAATNAQGVATPVGAQNPLPVINVAGAAATDGSGTLATGGSAQTLFGGIVPASGFLVQNNSS
Ga0066667_114599991	3300018433	Grasslands Soil	MTLLVKDANTNVQSLATVTDASGNLVPAHAPASTNALGVAAPVRPQNPLPVVNTAGNAASDGSGTLAAGGSAQTLFGGTVPANGYLVQNNSSAALW
Ga0066669_107051131	3300018482	Grasslands Soil	MTLLVKDANTSVQSLSTVTDGSGNLVPAHAPASTNAQGIAAPVGPQNPLPVVNTAGNSASDGSGTLAAGGSAQTLFGGAVPANGYLVQNNS
Ga0066669_123329611	3300018482	Grasslands Soil	MTLLVKDANTSMQSLSTVTDGNGNLVPTHAPAVTNAQGIAAPVGPQNPLPVVNTAGNAASDGSGTLAAGGSAQTLFGGAVPANGY
Ga0066669_124349472	3300018482	Grasslands Soil	MTLLVKDANTAVQALSTALDGNGNLVPLHAPATTNAQGVASPVGPQNPLPVVNTAGAAAG
Ga0182025_12000544	3300019786	Permafrost	MTLLVKDANTTIQSLSTEVDASGNLVPMHAPASVSQGVASPVGPQNPLPVINTAGAAESDGSGTVATGGSPQTLFGGAVPANGFLVQKQLVGGPMGL
Ga0193707_11665571	3300019881	Soil	MTLLVKDANTSVQSLSTVIDGNGSLVPVHAPAAANAQGVASPVGPQNPLPVVNTAATAASDGSGTVTTA
Ga0193751_11397811	3300019888	Soil	MTLFVKDANTTVQSLATQIDGNGNLVPLHAPAATSAQGIAAPVGPQNPLPVINTAGAVASDGSGTVATGGSAQALFGGIVPASGY
Ga0213875_100041782	3300021388	Plant Roots	MTLLVKDANTVVQSLATASDGNGNLVPMHAPATTTAQGVSTPVGVQNPLPVINVAGVPASDGSGTVATGGSAQTLFGGLVPVNGFLVQNNSNAALWVSDIGTAAAGGASLQIAASGGIFMTPSGYKPGGAVSLYGGSTGQAFAARRW
Ga0210393_108874001	3300021401	Soil	MTLLVKDANTTVQSLSTELDAGGNLVPLHAPASVSAGVASPVGPQNPLPVINTAGGVASDGSGTVATGG
Ga0210394_100116221	3300021420	Soil	MTLLVKDANTMVQSLSTEVDGSGNLVPVHASATTDSQGISTPVGLQNPLPVMNTAGAVASDGSGAVATGGSAQALF
Ga0210394_108836892	3300021420	Soil	MTLLVKDANTSVQSLSTVIDGNGSLVPLHAPAAANAQGVASPVGPQNPLPVVNTVGVAASDGSGTVAA
Ga0210409_102122721	3300021559	Soil	MTLLVKDANTTIQSLSTEPDSSGNLVPVHAPASVSQGVASPVGPQNPLPVINTAGAVASDGSGTVATGGSAQTLFGGAVPANGFLVQNNSSAALWVCDTGIASNGGASVQIAA
Ga0210409_104880461	3300021559	Soil	MTLLVKDANTSVQSLSTVIDGNGSLVPLHAPAAANAQGVASPVGPQNPLPVVNTVGVAASDGSGTVAAGGSAQSLFGGTVPA
Ga0212123_102727341	3300022557	Iron-Sulfur Acid Spring	MTLVVKDANTTVQALSTAIDGNGNLVPVHAPASTNAQGVATPAGPQNPLPVVNTAGAPASDGSGTIAAGGSAQTLFGGA
Ga0247677_10386832	3300024245	Soil	MTLLVKDANTTVQSLATVADANGNLLPAHASASTNAQGVAAPVGPQNPLPVVNTAGNAASDGSGTLA
Ga0210120_10635661	3300025556	Natural And Restored Wetlands	MTLLVKDANTAIQALATALDGNGSLVPVHVPAARNAQGVAIPVGPQNPLPVISTAAALASDGSGTVATGGAPQTLFGGIVPDNGFLVQNNSSAELWISDA
Ga0208849_10419302	3300025664	Arctic Peat Soil	MTLLVKDANTTVQPLSTELDGNGNLVPLHATASVSTQGVASPVGPQNPLPVINAAGAPASDGSGTVATGGSPQALFGGAVAANGFLVQNNSSAVLWICDTGIASSGGASVQIAANGGMFTTPSGYKPGGALSLYGGTTGQVFAARRW
Ga0207699_104949262	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTLLVKDANTSVQSLATVADANGNLLPAHAPASTNAQGVAAPVGPQNPLPVVNTAGNAASDGSGTLAAGGSA
Ga0207695_105467532	3300025913	Corn Rhizosphere	MTLQVKDANTVVQSLATVSDGSGNLVPVHAPASTNAQGVAIPVGSQNPLPVINTAGAAASDGSGTVATGGSAQTLF
Ga0207646_116004291	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTLLVKDANTTVQSMSTVTDGSGNLVPLHAPAVTNVQGVATPVGPQNPLPVVHTAATAASDGSGAVASGGNAQTLFGGAVPANGFLVQNNSSAALWICDTGAA
Ga0207664_101586981	3300025929	Agricultural Soil	MTLLVKDANTTVQSLATVADANGNLLPAHASASTNAQGVAAPVGPQNPLPVVNTAGNAASDGSGTL
Ga0207664_119254702	3300025929	Agricultural Soil	MTLLVKDANTTVQALSTVVDGNASLVPLHAPAATNAQGVAAPVGPANPLPVINTAGAAATDGSGTLATGGNAQTLFGGVVPVNGFL
Ga0207701_100784946	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTLLVKDANNTVQSLSTVTDGNGNLVPLHAAAVTNGQGVAAPVGPQNPLPVVNIAAGAASDGSGTVATGGS
Ga0207701_108177301	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTLLVKDANTTVQSLATGIDGSGNLVPLHALAAVDAQGIAGAVGLQNPMPVINTVSAAASDGSGTVATGGSAQLLF
Ga0207701_113549891	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTLLVKDANTAVQALATMFDGNGSLVPVHVPAASNGQGVATPVGPQNPLPVVNTAATAAGDGSGTVATGGAAQTLFGGIVPDNGFLVQNNSSA
Ga0207690_107859883	3300025932	Corn Rhizosphere	MTLLVKDANTTVQSLATAVDGSGNLVPLHAPAASDAQGIASAVGPQNPLPVINVAGAAASDGSGTV
Ga0207679_121236152	3300025945	Corn Rhizosphere	MTLLVKDANTAVQALATTLDGNGSLVPVHIPAASNAQGVAMPVGLQNPLPVVNTAATAAGDGSGTVATGGAAQTLFGGIVPDNGFLVQNNSSAALWISDVGIASAGGASIQIAANGGIFATPSGYR
Ga0207702_119829492	3300026078	Corn Rhizosphere	MTLLVKDANNTVQSLSTVTDGNGNLVPLHAAAVTNGQGVAAPVGPQNPLPVVNIAAGAASDGSGTVATGG
Ga0207641_124491101	3300026088	Switchgrass Rhizosphere	MTLLVKDANTAVQALATTLDGNGSLVPVHVPAASNAQGVATPVGPQNPLPVVNTAATAAGDGSGTVATGGAAQTLFGGIVPDNG
Ga0207676_117942801	3300026095	Switchgrass Rhizosphere	MTLLVKDANTTVQSLATGIDGSGNLVPLHALAAVDAQGIAGAVGLQNPMPVINTVSAAASDGSGTVATGGSAQLLFGGVVPAH
Ga0207674_121094612	3300026116	Corn Rhizosphere	MTLLVKDANTAVQALATMFDGNGSLVPVHVPAASNGQGVATPVGPQNPLPVVNTAATAAGDGSGTVATGGAAQTLFGGIVPDNGFLVQNNSSAALWISDVGIASAGGASIQIAANGGIFATPSGYKPA
Ga0209155_10791871	3300026316	Soil	MTLLVKDANTTVQSLSTVVDGNGNLVPAHAPATTSAQGVATPVGPQNPLPVVNTAGSAAGDGSGTVAAGGTAQTLFGGAV
Ga0209152_103026491	3300026325	Soil	MTLLVKDANTTVQSLATGVDGKGNLVPVHAPALTDALGVSTPVGLQNPLPVINTAGTAASDGSGAVATGGSAQTLFGGIVP
Ga0209059_12912741	3300026527	Soil	MTLLVKDANTSVQSLSTVTDGSGNLVPAHATASTNAQGIAAPVGPQNPLPVVNTAGNSASDGSGTLAAGGS
Ga0209807_13271231	3300026530	Soil	MTLLVKDANTTVQSLSTVVDGNGNLVPAHAPATTSAQGVATPVGPQNPLPVVNTAGSAAGDGSGTVAAGGTAQTLFGGAVPANGFLVQNNSSAALWICDTGAASN
Ga0209474_101823691	3300026550	Soil	MTLLVKDANTSMQSLSTVTDGNGNLVPTHAPAVTNAQGIAAPVGPQNPLPVVNTAGNAASDGSGTLAAGGSAQTLFGGAVPANGYLVQNSSSAALWISD
Ga0209577_106977971	3300026552	Soil	MTLLVKDANTSVQSLATVTDGNGNLVPAHAPASTNAQGVAAPVGPQNPLPVVNTAGT
Ga0179587_102884911	3300026557	Vadose Zone Soil	MTLLVKDANTTVQALSTVTDGNGNLVPVHAPTMTNAQGVATPVGPQNPLPVVNTAGSAASDGSGTVASGGNAQTLFGGAVPANGFLVQNNSSAVLWICDTGAAANGGASLQLAANGGIFATPSGYKPAGPVSLYGG
Ga0209009_10363212	3300027667	Forest Soil	MTLLVKDANTTIQPLSTELDGNGNLVPVHAPASTNAQGVASPVGPQNPLPVVNTAGAAASDGSGTVATGGSAQTLFGGAAPLNGYLVQNNSAAALWVSDIGAASNGG
Ga0209726_103026872	3300027815	Groundwater	MTLFVKDANTTVQSLATEVDGNGNLVPLHAPAATDAQGVSTPVGPQNPLPVINTAGAVASDGSGALAA
Ga0209701_101623501	3300027862	Vadose Zone Soil	MTLFVKDANTTVQSLATEVDGNGNLVPVHAPAATNAQGVSSAIGPQNPMPVINAAGAVAS
Ga0209590_105776062	3300027882	Vadose Zone Soil	MTLLVKDANTTVQSLATEIDGNGNLVPVHAPATTNAQGVSTAVGPQNPLPVINAAGAAAS
Ga0209168_106430511	3300027986	Surface Soil	MTLLVKDANTTVQALSTAIDGNGNLVPVHAPASTNAQGVATPAGPQNPLPVVNTAGAPAS
Ga0268266_116305142	3300028379	Switchgrass Rhizosphere	MTLLVKDANTAVQALATMFDGNGNLVPVHVPAASNGQGVATPVGPQNPLPVVNTAATAAGDGSGTVATGGAAQTLFGGIVPDNGFL
Ga0137415_107235081	3300028536	Vadose Zone Soil	MTLLVKDANTTVQSLSTVTDGNGNLVPVHAPAMTNAQSVATPVGPQNPLPVINTAGSAASDGSGTVA
Ga0137415_109681321	3300028536	Vadose Zone Soil	MTLLVKDANTTVQSLATEVDGNGNLVPVHAPATTNAQGVSTAVGPQNPLPVINTAGAAASDGSGTLATGGSAQTLFGGIVPANGFLVQNNSTAALWISDVGVASAGG
Ga0311355_115886431	3300030580	Palsa	MTLLVKDANTTIQSLSTELDGNGNLVPVHAPASVSQGVASPVGPANPLPVINTAGAAASDGSGTVATGGSPQTLFGGAVPVNGFLVQNNSSAALWVCDTGIASDGGAS
Ga0302180_103517171	3300031028	Palsa	MTLLVKDANTTIQSLSTELDGNGNLVPVHAPASVSQGVASPVGPANPLPVINTAGAAASDGSGTVATGGSPQTLFGGAVPANGFLVQNNSSAALWVCDT
Ga0302325_119249311	3300031234	Palsa	MTLLVKDANTTVQSLSTVADAGNNLVPVHAPAVTNAGVAAPVGPANPLPVINAAG
Ga0302325_127622282	3300031234	Palsa	MTLLVKDANTTVQSLSTELDGSGNLVPMHAPASVSQGVASPIGPTNPMPVINTAGAVASDGSGSVATGGSP
Ga0302324_1010005602	3300031236	Palsa	MTLLVKDANTTIQSLSTELDGSGNLVPVHAPASVSQGVASPVGPANPLPVINTAGAVASDGSGTVATGGSPQTLFGGAVPANGFLVQNNSSAALWVCDTGIATDGGA
Ga0302324_1010170651	3300031236	Palsa	MTLLVKDANTTVQSLSTELDGSGNLVPMHAPASVSQGVASPVGPQNPLPVINTAGAAASDGSGTVAAGGSPQ
Ga0302326_128966072	3300031525	Palsa	MTLLVKDANTTVQSLSTELDGSGNLVPVHVPASVGAGVVSPVGPQNPLPVINTAGAAASDGSGTVATGGSPQTLFGGAVPVNGFLVQNNSSAALWVCDTG
Ga0307373_103806341	3300031672	Soil	MTLLVKDANTTVQSLSTEIDGGGNLVPVHAPASTDTQGVSTPVGPQNPLPVVNTAGSAASDGSATVATGGSAQ
Ga0307476_106872452	3300031715	Hardwood Forest Soil	MTLLVKDANTTIQSLSTAPDGSGNLVPVHAPASVSQGVASPVGPANPLPVINTAGAAASDGSGAVATGGSPQILFGGAVPANGFLVQNNSSAA
Ga0308175_1023461231	3300031938	Soil	MTLLVKDANTAVQALATAFDGNGSLVPVHVPAASNAQGVAVPIGPQNPLPVVN
Ga0307479_115228101	3300031962	Hardwood Forest Soil	MTLLVKDANTAVQSLSTVTDGNGNLVPSHAPSSTNAQGVAAPVGPQNPLPVVNTAGIAASDGSGTLAAGGTAQSLFGGAVPANGFLVQNNSSAALGSP
Ga0307416_1013313581	3300032002	Rhizosphere	MTLLVKDANTAVQALATALDGNGSLVPVHVPAASNAQGVATPVGLQNPLPVVNTAATAAGDGSG
Ga0311301_125546711	3300032160	Peatlands Soil	MTLLVKDANTTVQSLSTEVDGNGNLVPVHAPAATNAQGVSTPVGPQNPLPVMNAAGAAASDGSGTLATGGSAQTLFGGIVPVNGFL
Ga0307471_1033378691	3300032180	Hardwood Forest Soil	MTLFVKDANTTVQSLSTEIDGNGNLVPVHAPASTSAGVSTPVGPQNPLPVINADGAVASDGSGSLASGGSAQTLFGGIVPAYGFLVQNNS
Ga0335078_124721051	3300032805	Soil	MTLLVKDANTTVQSLSTEPDASGNLVPVHAPASVSAGVASPVGPQNPLPVVNTAGAA
Ga0335074_107846712	3300032895	Soil	MTLLVKDANTTIQSLSTETDGSGNLVPVHAPASVVSGVASPVGPGNPLPVINAAGAVANDGSGSVATGGSPQTLFGGTVPVNGFLVQNNSSAALWVCDTGIASNGGASIQLAANGGLFVTPS
Ga0335074_116257291	3300032895	Soil	MTLLVKDANTTIQSLSTETDGAGNLVPVHAPASVSQGVASPVGPANPLPVINTAAVVASDGSGAVA
Ga0335072_102569773	3300032898	Soil	MTLLVKDANTTIQSLSTETDGSGNLVPVHAPASVVSGVASPVGPGNPLPVINAAGAVANDGSGSVATGGSPQTLFGGTVP
Ga0335073_116378131	3300033134	Soil	MTLLVKDANTTIQSLSTELDGSGNLVPVHAPAAVSQGVASPVGPTNPLPVINTAGAAASDGSGSVATGGSPQTLFGGAVPVNGFLVQNNSSAVLWVCDTGIASSGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F041829

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences