NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F041895

Metagenome / Metatranscriptome Family F041895

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F041895
Family Type Metagenome / Metatranscriptome
Number of Sequences 159
Average Sequence Length 41 residues
Representative Sequence KDVNDIADAIHKVLENIEELRGLDHKAIRNQRLGRADRES
Number of Associated Samples 134
Number of Associated Scaffolds 159

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 97.48 %
% of genes from short scaffolds (< 2000 bps) 90.57 %
Associated GOLD sequencing projects 128
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (88.050 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(20.755 % of family members)
Environment Ontology (ENVO) Unclassified
(35.220 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(57.862 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 51.47%    β-sheet: 0.00%    Coil/Unstructured: 48.53%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 159 Family Scaffolds
PF01408GFO_IDH_MocA 47.17
PF02894GFO_IDH_MocA_C 37.11
PF13520AA_permease_2 3.77
PF00532Peripla_BP_1 3.14
PF08240ADH_N 1.26
PF00324AA_permease 1.26
PF07969Amidohydro_3 1.26
PF13432TPR_16 0.63
PF13181TPR_8 0.63
PF02775TPP_enzyme_C 0.63
PF13377Peripla_BP_3 0.63
PF00356LacI 0.63

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 159 Family Scaffolds
COG0673Predicted dehydrogenaseGeneral function prediction only [R] 37.11
COG0531Serine transporter YbeC, amino acid:H+ symporter familyAmino acid transport and metabolism [E] 1.26
COG0833Amino acid permeaseAmino acid transport and metabolism [E] 1.26
COG1113L-asparagine transporter or related permeaseAmino acid transport and metabolism [E] 1.26
COG1115Na+/alanine symporterAmino acid transport and metabolism [E] 1.26

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms88.05 %
UnclassifiedrootN/A11.95 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003505|JGIcombinedJ51221_10003947All Organisms → cellular organisms → Bacteria4316Open in IMG/M
3300004080|Ga0062385_10197808All Organisms → cellular organisms → Bacteria1082Open in IMG/M
3300004633|Ga0066395_10886310All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium539Open in IMG/M
3300004635|Ga0062388_100063109All Organisms → cellular organisms → Bacteria2485Open in IMG/M
3300004635|Ga0062388_100368465All Organisms → cellular organisms → Bacteria1233Open in IMG/M
3300005471|Ga0070698_101975521Not Available536Open in IMG/M
3300005533|Ga0070734_10389696All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300005536|Ga0070697_100265844Not Available1469Open in IMG/M
3300005537|Ga0070730_10379223All Organisms → cellular organisms → Bacteria917Open in IMG/M
3300005541|Ga0070733_10017672All Organisms → cellular organisms → Bacteria4453Open in IMG/M
3300005564|Ga0070664_102148897All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium530Open in IMG/M
3300005610|Ga0070763_10423663All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium752Open in IMG/M
3300005921|Ga0070766_10159858All Organisms → cellular organisms → Bacteria1386Open in IMG/M
3300005921|Ga0070766_10678216All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300005921|Ga0070766_10988001All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium578Open in IMG/M
3300006050|Ga0075028_100084471All Organisms → cellular organisms → Bacteria1593Open in IMG/M
3300006059|Ga0075017_101027549All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium642Open in IMG/M
3300006176|Ga0070765_100205039All Organisms → cellular organisms → Bacteria1791Open in IMG/M
3300006903|Ga0075426_10395048All Organisms → cellular organisms → Bacteria1020Open in IMG/M
3300006914|Ga0075436_101185013All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium576Open in IMG/M
3300009088|Ga0099830_10858448All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium750Open in IMG/M
3300009089|Ga0099828_10348239All Organisms → cellular organisms → Bacteria1335Open in IMG/M
3300009162|Ga0075423_12600946All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium553Open in IMG/M
3300009624|Ga0116105_1175071All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium580Open in IMG/M
3300009638|Ga0116113_1074714All Organisms → cellular organisms → Bacteria800Open in IMG/M
3300009792|Ga0126374_11695899All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium525Open in IMG/M
3300010043|Ga0126380_12243411Not Available506Open in IMG/M
3300010048|Ga0126373_12595573All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300010048|Ga0126373_13128890All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium515Open in IMG/M
3300010360|Ga0126372_11651027All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium681Open in IMG/M
3300010361|Ga0126378_13445212All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium502Open in IMG/M
3300010376|Ga0126381_104005063All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300010376|Ga0126381_104629861Not Available530Open in IMG/M
3300010398|Ga0126383_10621930All Organisms → cellular organisms → Bacteria1153Open in IMG/M
3300010401|Ga0134121_11981320All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium614Open in IMG/M
3300011085|Ga0138581_1075545All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium581Open in IMG/M
3300011269|Ga0137392_11050617All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium669Open in IMG/M
3300011269|Ga0137392_11520619All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium528Open in IMG/M
3300012917|Ga0137395_10899942All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300012918|Ga0137396_10520633All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium881Open in IMG/M
3300013297|Ga0157378_10933312All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300014201|Ga0181537_10973803All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium574Open in IMG/M
3300014501|Ga0182024_12745126All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium526Open in IMG/M
3300014655|Ga0181516_10764632All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium502Open in IMG/M
3300014657|Ga0181522_10237358All Organisms → cellular organisms → Bacteria1076Open in IMG/M
3300016270|Ga0182036_10357206All Organisms → cellular organisms → Bacteria1128Open in IMG/M
3300016319|Ga0182033_10164186All Organisms → cellular organisms → Bacteria1730Open in IMG/M
3300016319|Ga0182033_11384081Not Available633Open in IMG/M
3300016319|Ga0182033_11706291All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300016371|Ga0182034_10182260All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1609Open in IMG/M
3300017948|Ga0187847_10032345All Organisms → cellular organisms → Bacteria3102Open in IMG/M
3300017955|Ga0187817_11092283All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium512Open in IMG/M
3300017972|Ga0187781_10276240Not Available1191Open in IMG/M
3300017972|Ga0187781_10361841All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1033Open in IMG/M
3300017973|Ga0187780_10617456Not Available779Open in IMG/M
3300017975|Ga0187782_10426959All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1009Open in IMG/M
3300017975|Ga0187782_10795245All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium731Open in IMG/M
3300018006|Ga0187804_10031571All Organisms → cellular organisms → Bacteria1994Open in IMG/M
3300018007|Ga0187805_10623747All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium510Open in IMG/M
3300018009|Ga0187884_10099584All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300018058|Ga0187766_10957162Not Available607Open in IMG/M
3300018062|Ga0187784_11619408All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium513Open in IMG/M
3300020579|Ga0210407_10578290All Organisms → cellular organisms → Bacteria876Open in IMG/M
3300020579|Ga0210407_11010384All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium634Open in IMG/M
3300020580|Ga0210403_11140362All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium604Open in IMG/M
3300020583|Ga0210401_10366609All Organisms → cellular organisms → Bacteria1302Open in IMG/M
3300020583|Ga0210401_10658420All Organisms → cellular organisms → Bacteria908Open in IMG/M
3300021046|Ga0215015_11018540All Organisms → cellular organisms → Bacteria1457Open in IMG/M
3300021170|Ga0210400_10103019All Organisms → cellular organisms → Bacteria2263Open in IMG/M
3300021171|Ga0210405_10960098All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300021178|Ga0210408_11342380All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium541Open in IMG/M
3300021403|Ga0210397_10445446All Organisms → cellular organisms → Bacteria974Open in IMG/M
3300021405|Ga0210387_11828755Not Available511Open in IMG/M
3300021407|Ga0210383_10259539All Organisms → cellular organisms → Bacteria1492Open in IMG/M
3300021420|Ga0210394_11210039All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium648Open in IMG/M
3300021432|Ga0210384_10216927All Organisms → cellular organisms → Bacteria1721Open in IMG/M
3300021432|Ga0210384_10384522All Organisms → cellular organisms → Bacteria1264Open in IMG/M
3300021474|Ga0210390_11372534All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium564Open in IMG/M
3300021475|Ga0210392_10452220All Organisms → cellular organisms → Bacteria942Open in IMG/M
3300021477|Ga0210398_11489311All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300021479|Ga0210410_10247510All Organisms → cellular organisms → Bacteria1599Open in IMG/M
3300021559|Ga0210409_10077495All Organisms → cellular organisms → Bacteria3084Open in IMG/M
3300021559|Ga0210409_10634061All Organisms → cellular organisms → Bacteria938Open in IMG/M
3300021559|Ga0210409_11498271Not Available550Open in IMG/M
3300021560|Ga0126371_11908571All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300024225|Ga0224572_1021680All Organisms → cellular organisms → Bacteria1234Open in IMG/M
3300024227|Ga0228598_1031572All Organisms → cellular organisms → Bacteria1043Open in IMG/M
3300024249|Ga0247676_1004957All Organisms → cellular organisms → Bacteria1976Open in IMG/M
3300025906|Ga0207699_10375187All Organisms → cellular organisms → Bacteria1008Open in IMG/M
3300025939|Ga0207665_10418524All Organisms → cellular organisms → Bacteria1023Open in IMG/M
3300026467|Ga0257154_1000662All Organisms → cellular organisms → Bacteria3560Open in IMG/M
3300026538|Ga0209056_10704443All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium511Open in IMG/M
3300027045|Ga0207726_1005783All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2232Open in IMG/M
3300027516|Ga0207761_1082652All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium625Open in IMG/M
3300027548|Ga0209523_1017065All Organisms → cellular organisms → Bacteria1395Open in IMG/M
3300027605|Ga0209329_1113545All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium595Open in IMG/M
3300027667|Ga0209009_1159319All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium574Open in IMG/M
3300027703|Ga0207862_1198397All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium596Open in IMG/M
3300027727|Ga0209328_10167426All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium666Open in IMG/M
3300027765|Ga0209073_10352771All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300027795|Ga0209139_10020016All Organisms → cellular organisms → Bacteria2417Open in IMG/M
3300027824|Ga0209040_10377475All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium665Open in IMG/M
3300027853|Ga0209274_10063570All Organisms → cellular organisms → Bacteria1773Open in IMG/M
3300027855|Ga0209693_10000619All Organisms → cellular organisms → Bacteria14562Open in IMG/M
3300027855|Ga0209693_10612662Not Available513Open in IMG/M
3300027867|Ga0209167_10146241All Organisms → cellular organisms → Bacteria1237Open in IMG/M
3300027875|Ga0209283_10709745All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium627Open in IMG/M
3300027884|Ga0209275_10681189Not Available592Open in IMG/M
3300028806|Ga0302221_10450123All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium561Open in IMG/M
3300028863|Ga0302218_10243199All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium578Open in IMG/M
3300028906|Ga0308309_11257361All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300029922|Ga0311363_10255861All Organisms → cellular organisms → Bacteria2028Open in IMG/M
3300030007|Ga0311338_10661781All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1063Open in IMG/M
3300030020|Ga0311344_10745951All Organisms → cellular organisms → Bacteria807Open in IMG/M
3300030041|Ga0302274_10126046All Organisms → cellular organisms → Bacteria1346Open in IMG/M
3300030043|Ga0302306_10073689All Organisms → cellular organisms → Bacteria1331Open in IMG/M
3300031028|Ga0302180_10354528All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium743Open in IMG/M
3300031525|Ga0302326_11750652Not Available817Open in IMG/M
3300031543|Ga0318516_10341081All Organisms → cellular organisms → Bacteria865Open in IMG/M
3300031708|Ga0310686_109721463All Organisms → cellular organisms → Bacteria1031Open in IMG/M
3300031720|Ga0307469_10396920All Organisms → cellular organisms → Bacteria1176Open in IMG/M
3300031720|Ga0307469_10425017All Organisms → cellular organisms → Bacteria1143Open in IMG/M
3300031720|Ga0307469_10990846All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium784Open in IMG/M
3300031740|Ga0307468_100760742All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium820Open in IMG/M
3300031753|Ga0307477_10943158All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium568Open in IMG/M
3300031754|Ga0307475_10065047All Organisms → cellular organisms → Bacteria2776Open in IMG/M
3300031754|Ga0307475_10413863All Organisms → cellular organisms → Bacteria1083Open in IMG/M
3300031763|Ga0318537_10333071All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium561Open in IMG/M
3300031769|Ga0318526_10468168All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium515Open in IMG/M
3300031778|Ga0318498_10346362All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium664Open in IMG/M
3300031781|Ga0318547_10250462All Organisms → cellular organisms → Bacteria1068Open in IMG/M
3300031820|Ga0307473_10408144All Organisms → cellular organisms → Bacteria892Open in IMG/M
3300031823|Ga0307478_10190867All Organisms → cellular organisms → Bacteria1644Open in IMG/M
3300031823|Ga0307478_10764394All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300031846|Ga0318512_10650616Not Available539Open in IMG/M
3300031879|Ga0306919_10683224All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300031890|Ga0306925_10963526All Organisms → cellular organisms → Bacteria873Open in IMG/M
3300031897|Ga0318520_10660643All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium652Open in IMG/M
3300031910|Ga0306923_10929520All Organisms → cellular organisms → Bacteria950Open in IMG/M
3300031910|Ga0306923_11002347All Organisms → cellular organisms → Bacteria907Open in IMG/M
3300031946|Ga0310910_11460456Not Available525Open in IMG/M
3300031959|Ga0318530_10111446All Organisms → cellular organisms → Bacteria1094Open in IMG/M
3300031962|Ga0307479_10238608All Organisms → cellular organisms → Bacteria1793Open in IMG/M
3300031962|Ga0307479_11476066All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium637Open in IMG/M
3300031962|Ga0307479_11784036All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium567Open in IMG/M
3300032001|Ga0306922_10862671All Organisms → cellular organisms → Bacteria943Open in IMG/M
3300032174|Ga0307470_11522846Not Available557Open in IMG/M
3300032180|Ga0307471_100482509All Organisms → cellular organisms → Bacteria → Proteobacteria1385Open in IMG/M
3300032180|Ga0307471_103352959All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium567Open in IMG/M
3300032261|Ga0306920_101879583All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300032261|Ga0306920_103593733Not Available571Open in IMG/M
3300032783|Ga0335079_10584853All Organisms → cellular organisms → Bacteria1179Open in IMG/M
3300032805|Ga0335078_11732842All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium683Open in IMG/M
3300032898|Ga0335072_11795276All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium506Open in IMG/M
3300033134|Ga0335073_10043092All Organisms → cellular organisms → Bacteria6089Open in IMG/M
3300033158|Ga0335077_11936795All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium549Open in IMG/M
3300034124|Ga0370483_0077873All Organisms → cellular organisms → Bacteria1074Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil20.75%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil10.06%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.55%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.29%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil6.29%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.40%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland4.40%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil3.77%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa3.77%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.14%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.14%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.52%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.52%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.52%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.89%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.89%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.89%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.26%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.26%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.26%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog1.26%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.26%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.63%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.63%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.63%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.63%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.63%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.63%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.63%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009624Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10EnvironmentalOpen in IMG/M
3300009638Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011085Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 71 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014201Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014655Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaGEnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024225Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5Host-AssociatedOpen in IMG/M
3300024227Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4Host-AssociatedOpen in IMG/M
3300024249Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026467Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-AEnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300027045Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)EnvironmentalOpen in IMG/M
3300027516Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)EnvironmentalOpen in IMG/M
3300027548Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027605Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027667Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027703Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)EnvironmentalOpen in IMG/M
3300027727Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027795Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027824Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300028806Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1EnvironmentalOpen in IMG/M
3300028863Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029922III_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030020II_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300030041Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1EnvironmentalOpen in IMG/M
3300030043Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1EnvironmentalOpen in IMG/M
3300031028Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031763Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29EnvironmentalOpen in IMG/M
3300031769Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031859Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031959Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300034124Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ51221_1000394753300003505Forest SoilVGSIADVNSIADAIEKVLGASEELRGLDHKAIRNQRLGRADRES*
Ga0062385_1019780813300004080Bog Forest SoilNIDSIADGIFKVLENIEELRGLEHRAIKAQGMSRADRES*
Ga0062389_10142625323300004092Bog Forest SoilQLFLGSTLDVDAIADAMQKVLDNLEELRGLDHKAIRNQKLGRADRES*
Ga0066395_1088631013300004633Tropical Forest SoilLFLSERKEIDTILEAIFKALDNIDELRGLEHQAIRNQGLSRADRES*
Ga0062388_10006310913300004635Bog Forest SoilQDIDAIADAIHKVLENLEELRGLDHKAIRNQKLGRADRES*
Ga0062388_10036846523300004635Bog Forest SoilGTTSDVDAIADAIDKVLANIEELRGLDHKAIRNQKLGRADRES*
Ga0070698_10197552123300005471Corn, Switchgrass And Miscanthus RhizosphereLFLGSKEDIDTIVEAIFKTLENIEELRGLEHSAIRNQGLSRADRES*
Ga0070734_1038969613300005533Surface SoilAIANAIHKVLENIEELRGLEHKAIRNQGLSRADRES*
Ga0070697_10026584413300005536Corn, Switchgrass And Miscanthus RhizosphereSKEDIDTIVEAIFKTLENIEELRGLEHSAIRNQGLSRADRES*
Ga0070730_1037922323300005537Surface SoilHEAIWFPHYLFLGDKKEIDTIIDAIFKTLDNIEELRGLEHPAVRAQGQSRADRES*
Ga0070733_1001767213300005541Surface SoilVDSIADAIFKVLENIEELRGLEHRAIKAQTQSRADRES*
Ga0070664_10214889723300005564Corn RhizosphereDSMAAAVFKVFENAGELRGLEHPAIRSQQLSRADRES*
Ga0070763_1042366323300005610SoilTKDVDDIADAIHKVLENVEELRELDHKAIRNQRLGRADRES*
Ga0070766_1015985833300005921SoilADALEKVLGASEELRGLDHKAIRNQRLGRADRES*
Ga0070766_1067821623300005921SoilADAIEKVLANIEDLRGLDHAAIRNQRLSRADRES*
Ga0070766_1098800113300005921SoilHFLGSSADVDAIAEAIHKVLTNIEELRALDHKAIRNQRLGRADRES*
Ga0075028_10008447133300006050WatershedsTKDVDDIADAIEKILANIEELRGLDHKAIRNQKLGRADRES*
Ga0075017_10102754913300006059WatershedsIADAIHKVLANIEELRSLDHKAIRNQRLSRADRES*
Ga0070765_10020503933300006176SoilVDDIADAIEKVLANIEELRGLDHKAIRNQKLGRADRES*
Ga0075426_1039504813300006903Populus RhizosphereIWFPHYLFLGDKKEIDTIIDAILKTLKNIEELSGLEHPAIRAQGQSRADRES*
Ga0075436_10118501323300006914Populus RhizosphereHYLFLSDRKDIDTIIDAILKTFESIEELRGLDHPAIRAQKLSRADRES*
Ga0099830_1085844823300009088Vadose Zone SoilDVDAMANAIHKILENIEELRGLDHKAIRNQKLGRADRES*
Ga0099828_1034823913300009089Vadose Zone SoilEEDIDTIADAILKALENIEELRSLEHPAIRSQGQSRADRES*
Ga0075423_1260094623300009162Populus RhizosphereEAIWFPHYLFLGDKKEIDTIADAILKVLRNIEELRGLEHPAIRAQGQSRADRES*
Ga0116105_117507113300009624PeatlandIVEAMHKVLKNIESLRDLDHKAIRNQRLSRADRES*
Ga0116113_107471423300009638PeatlandLVSSADVDAIVDAISKVLANIEELRGLDHKAIRNQKLGRADRES*
Ga0126374_1169589923300009792Tropical Forest SoilVSDIADAIHKVLENIEELRGLDHKAIRNQRLGRADRES*
Ga0126380_1224341123300010043Tropical Forest SoilITQDTDAIADAVHKVLENLEELRNLDHKAIRNQKLSRADRES*
Ga0126373_1259557313300010048Tropical Forest SoilDIADAIHKVLENIEELRGLDHKAIRNQRLGRADRES*
Ga0126373_1312889013300010048Tropical Forest SoilEDTDTIADAIEKVLANIEELRGLDHKAIQNQRLGRADRES*
Ga0126372_1165102723300010360Tropical Forest SoilSAKDIDDIADAIHKVLENIEELRGLDHKAIRNQRLGRADRES*
Ga0126378_1344521223300010361Tropical Forest SoilGIDSIADAIHKVLENIDELRGLEHRAIKNQNLSRADRES*
Ga0126381_10400506313300010376Tropical Forest SoilTTKDVNDIADAIHKVLENIEELRGLDHKAIRNQRLGRADRES*
Ga0126381_10462986113300010376Tropical Forest SoilGPSKDVDDIAEAIHKVLENIKELRLLDHKAIRNQRLGRADRES*
Ga0126383_1062193013300010398Tropical Forest SoilLFLSDRKNIDTITDAIFKIFENIEELRGLEHPAIRAQRLSRADRES*
Ga0134121_1198132023300010401Terrestrial SoilPHYLFLGDKKEIDTIADAIFKVLKNIEELRGLEHPAIRAQGQSRADRES*
Ga0138581_107554513300011085Peatlands SoilIDSIVEAIFKALEHIEDLRGLEHQAIKNQGLSRADRES*
Ga0137392_1105061713300011269Vadose Zone SoilIDTIIDAIFKTLDNIEELRGLEHPAVRSQGMSRADRES*
Ga0137392_1152061913300011269Vadose Zone SoilLGDKKSIDSIAEAIFKVLENIEELRGLEHRAIKAQGLSRADRES*
Ga0137395_1089994213300012917Vadose Zone SoilGTAQDVDAIAVAIQKVLSNIEELRGLDHKAIRNQRLGRADRES*
Ga0137396_1052063323300012918Vadose Zone SoilLFLGGKANIDSIAEAIFKVLENIEELRGLEHRAIKSQGLSRADRES*
Ga0157378_1093331223300013297Miscanthus RhizosphereIVDAIFKTLDNIEELRGLEHPAIRSQGLSRADRES*
Ga0181537_1097380313300014201BogIVNAIHKVIENIEELRGLDHKAIRNQKLGRADRES*
Ga0182024_1274512623300014501PermafrostPRSDIDAIVEAMHKVLKNIESLRDLDHKAIRNQRLSRADRES*
Ga0181516_1076463223300014655BogDAIANAIHKVLENIEELRGLDHKAIRNQKLGRADRES*
Ga0181522_1023735823300014657BogVDDIANAIHKVLANLDELRGLDHKAIRNQKLGRADRES*
Ga0182036_1035720623300016270SoilDSIVDAIHKVLENFEEVRGLEHKAIKAQGQSRADRES
Ga0182033_1016418613300016319SoilGTTKDVNDIADAIHKVLENIEELRGLDHKAIRNQRLGRADRES
Ga0182033_1138408113300016319SoilHFLGPKKDVDDIVDAIHKVLENIEDLRNIDHKAIRNQRLGRADRES
Ga0182033_1170629123300016319SoilFLGTAKDVNDIADAIHKVLENIEELRGLDHKAIRNQRLGRADRES
Ga0182034_1018226033300016371SoilGTAKDVNDIADAIHKVLENIEELRGLDHKAIRNQRLGRADRES
Ga0187847_1003234513300017948PeatlandKDVDAIADGIHKVLEHIEELRNLDHKAIRNQRLSRADRES
Ga0187817_1109228313300017955Freshwater SedimentDAIADAIHKVLENIEELCNLDHKAIRNQRLSRADRES
Ga0187781_1027624013300017972Tropical PeatlandVDAIANGIHKVLENIEELRGLDHKSIRNQRLSRADRES
Ga0187781_1036184123300017972Tropical PeatlandRDVDSIADAIHKVLENREELRGLDHKAIRNQRLSRADRES
Ga0187780_1061745613300017973Tropical PeatlandIVEAIFKALDNIEELRGLEHQAIKNQGLSRADRES
Ga0187782_1042695923300017975Tropical PeatlandSIADAIHKVLENREELRGLDHKAIRNQRLSRADRES
Ga0187782_1079524523300017975Tropical PeatlandGGAEDAESIANAIHKVLENCEELRGLDHKAIRNQRLGRADRES
Ga0187804_1003157133300018006Freshwater SedimentRKDVDAIADAIHKVLENIEELRSLDHKAIRNQRLSRADRES
Ga0187805_1062374713300018007Freshwater SedimentHYLFLGGPEDAESVANAIHKVLDNCEELRGLDHKAIRNQKLGRADRES
Ga0187884_1009958423300018009PeatlandSSADVDAIVDAISKVLANIEELRGLDHKAIRNQKLGRADRES
Ga0187766_1095716223300018058Tropical PeatlandADIDSIVEAIFKALDNIEELRGLEHQAIKNQGLSRADRES
Ga0187784_1161940813300018062Tropical PeatlandDAIANAIHKVLDNIEELRGLEHKAIRNQGLSRADRES
Ga0210407_1057829013300020579SoilVEAIADAIHKVLTNIEELGGLDHKAIRNQKLGRADRES
Ga0210407_1101038423300020579SoilANIDSIADGIFKVLENLEELRGLEHRAIKAQGMSRADRES
Ga0210403_1114036213300020580SoilFLGSKANIDSIVDGIFKVLENIEEVRGLEHRAIKAQGMSRADRES
Ga0210401_1036660913300020583SoilAVWFPHQLFLGGKENVDSVADAIAKVLENIEELRGLEHRAIKAQGMSRADRES
Ga0210401_1065842023300020583SoilTKDVDDITDAIEKVLTNIEELRGLDHKAIRNQKLGRADRES
Ga0215015_1101854013300021046SoilHLFLGGKANIDSIAEAIFKVLENIEELRGLEHRAIKSQGLSRADRES
Ga0210400_1010301933300021170SoilFLGGKANIDSIANGIFKVLENIEELRGLEHRAIKAQGMSRADRES
Ga0210405_1096009823300021171SoilKDVDDIADAIHKVLENVEELRGLDHKAIRNQRLGRADRES
Ga0210408_1134238023300021178SoilAYHEAVWFPHYLFLGDKKEIDTIVEAIFKTLDNIEELRGLEHPAIRSQGLSRADRES
Ga0210397_1044544623300021403SoilSSEDTDAIVNGIHKVLENLEELRGLDHKAIRNQKLGRADRES
Ga0210387_1182875513300021405SoilVDSIADAIEKVLGASEELRGLDHKAIRNQRLGRADRES
Ga0210383_1025953933300021407SoilVDAIADGIHKVLENIEEVRTVDHKAIRNQRLSRADRES
Ga0210394_1121003913300021420SoilVDAIADAIHKVLANIEELRGLDHKTIRNQKLGRADRES
Ga0210384_1021692713300021432SoilGSSADVDAIADAIHKVLANIEELRGLDHKTIRNQKLGRADRES
Ga0210384_1038452223300021432SoilDAIAEAIHKVLTNIEELRALDHKAIRNQRLGRADRES
Ga0210390_1137253423300021474SoilDVDSIVDAISKVIENIEELRGLEHTAIKNQGLSRADRES
Ga0210392_1045222023300021475SoilAIADAIHKVLENVEELRALDHKAIRNQKLGRADRES
Ga0210398_1148931113300021477SoilAIADAIGKVLANIEELRGLDHKAIRNQKLGRADRES
Ga0210410_1024751033300021479SoilRDVDAIADAIHKVLGGIEELRGLDHKAIRNQRLGRADRES
Ga0210409_1007749513300021559SoilGTTKDVDDIADAIHKVLENVEELRGLDHKAIRNQRLGRADRES
Ga0210409_1063406123300021559SoilKEDVDSIVNAIVKVLENIEEVRGLEHRAIKAQGLSRADRES
Ga0210409_1149827123300021559SoilIADAIHKVLENVEELRGLDHKAIRNQRLGRADRES
Ga0126371_1190857113300021560Tropical Forest SoilDIADAIHKVLENIEELRGLDHKAIRNQRLGRADRES
Ga0224572_102168013300024225RhizosphereDVDWIADAIEKVLGASEELRGLDHKAIRNQRLGRADRES
Ga0228598_103157213300024227RhizosphereADVDSIADAIEKVLSASEELRGLDHKAIRNQRLGRADRES
Ga0247676_100495733300024249SoilAAYHEAIWFPHYLFLGDKKEIDTIIDAIFKTLDNIEELRGLEHSAIRAQGQSRADRES
Ga0207699_1037518723300025906Corn, Switchgrass And Miscanthus RhizosphereADVDSIVNAMCKVMENIEELRGLEHPAVKAQGQSRADRES
Ga0207665_1041852413300025939Corn, Switchgrass And Miscanthus RhizosphereWFPHYLFLGDKKEIDSIIDAIFKAMENIEELRGLDHPAIRSQSLSRADRES
Ga0257154_100066253300026467SoilIADAIEKVLGAIEELRDLDHKAIRNQKLGRADRES
Ga0209056_1070444323300026538SoilDTIVDAILKTLKNIEELSGLEHPAIRAQGQSRADRES
Ga0207726_100578313300027045Tropical Forest SoilKDVNDIADAIHKVLENIEELRDLDHKAIRNQRLGRADRES
Ga0207761_108265223300027516Tropical Forest SoilTEKDVDDIVSAIDKVTAGIEQLRGLDHKAIRNQRLSRADRES
Ga0209523_101706513300027548Forest SoilTQDVDAIADAIHKVLGGIEELRGLDHKAIRNQRLGRADRES
Ga0209329_111354513300027605Forest SoilRDVDVIADAIHKVLGGIEELRGLDHKAIRNQRLGRADRES
Ga0209009_115931923300027667Forest SoilFLGGKENVDSIVDAIKKVLENIEELRGLDHRAIKDQGLSRADRES
Ga0207862_119839723300027703Tropical Forest SoilAFLGTEKDVDDIVSAIDKVTAGIEQLRGLDHKAIRNQRLSRADRES
Ga0209328_1016742613300027727Forest SoilDKKSIDSIADAIHKVLENIEELRGLEHRAIKNQGLSRADRES
Ga0209073_1035277123300027765Agricultural SoilIADAIHKVLENIDELAGLDHKAIRNQKLSRADRES
Ga0209139_1002001633300027795Bog Forest SoilIADVDSIADAIEKVLGASEELRGLDHKAIRNQKLGRADRES
Ga0209040_1037747523300027824Bog Forest SoilFLGSVKDVDAIADAIHKVLANIEGLRSLDHKAIRNQRLSRADRES
Ga0209274_1006357033300027853SoilAIADAIHKVLTNIEELRGVDHKAIRNQKLGRADRES
Ga0209693_10000619113300027855SoilKANIDSIADGICKVLENIEELRGLEHRAIKAQGMSRADRES
Ga0209693_1061266223300027855SoilSAADVDSIADAIEKVLGASKESRGLDHKAIRNQRLGRADRES
Ga0209167_1014624123300027867Surface SoilVDSIADAIFKVLENIEELRGLEHRAIKAQTQSRADRES
Ga0209283_1070974513300027875Vadose Zone SoilHEAIWFPHYLFLGDKKEIDTIADAIFKVLNNIEELRGLEHPAIRSQGQSRADRES
Ga0209275_1068118913300027884SoilIFLGPRSDIDSIVEAMQKVLKNIENLRGLDHKAIRNQRLSRADRES
Ga0302221_1045012323300028806PalsaIADAIHKVLAASEELRGLDHKAIRNQKLGRADRES
Ga0302218_1024319913300028863PalsaTADVEAIADAIHKVLAASEELRGLDHKAIRNQKLGRADRES
Ga0308309_1125736113300028906SoilIDTIVEAMHKVLGNIESLRDLDHKAIRNQRLSRADRES
Ga0311363_1025586133300029922FenKENVDSIVDAIRKVLENVEELRGLEHRAIKDQGLSRADRES
Ga0311338_1066178113300030007PalsaIDAIVEAIQKVLKNIESLRDLDHKAIRNQRLSRADRES
Ga0311344_1074595123300030020BogAIANAIHKVLENIEELRGLDHKAIRNQKLGRADRES
Ga0302274_1012604623300030041BogENVDSIVDAIGKVLENVEELRGLEHRAIKDQGLSRADRES
Ga0302306_1007368913300030043PalsaFVGSTADVEAIADAIHKVLAASEELRGLDHKAIRNQKLGRADRES
Ga0302180_1035452823300031028PalsaIFLGPRADIDAIVEAIHKVLKNIESLRDLDHKAIRNQRLSRADRES
Ga0302326_1175065213300031525PalsaDAIVEAMHKVLKNIECLRDLDHKAIRNQRLSRADRES
Ga0318516_1034108113300031543SoilQHFLGTTKDVNDIADAIHKVLENIEELRGLDHKAIRNQRLGRADRES
Ga0310686_10972146313300031708SoilIADVDSIADAIEKVLGASEELRGLDHKAIRNQRLGRADRES
Ga0307469_1039692013300031720Hardwood Forest SoilDVDSIVNAMCKVMENIEELRGLEHPAVKAQGQSRADRES
Ga0307469_1042501713300031720Hardwood Forest SoilLGTTKDVDDIADAIHKVLENVEELRGLDHKAIRNQKLGRADRES
Ga0307469_1099084613300031720Hardwood Forest SoilLFLGDKKEIDTIIDAIFKTLKNIEELRGLDHPAVRSQGMSRADRES
Ga0307468_10076074223300031740Hardwood Forest SoilLGSTNDVDAIADAIHKVLGGIEELRGLDHKAIRNQRLGRADRES
Ga0307477_1094315813300031753Hardwood Forest SoilFLGPRSDIDAIVEAMHKVLKNIESLRDLDHKAIRNQRLSRADRES
Ga0307475_1006504713300031754Hardwood Forest SoilREDVDSIVNAICKAMENIEELRGLEHPAIKAQGQSRADRES
Ga0307475_1041386323300031754Hardwood Forest SoilDAIADAIHKVLGGIEELRQLDHKAIRNQRLGRADRES
Ga0318537_1033307113300031763SoilTKKDVDSIVDAMLKVLENIEELRGLEHPAIKAQTQSRADRES
Ga0318526_1046816813300031769SoilKDVNDIADAIHKVLENIEELRGLDHKAIRNQRLGRADRES
Ga0318498_1034636223300031778SoilTTKDVNDIADAIHKVLENIEELRGLDHKAIRNQRLGRADRES
Ga0318547_1025046213300031781SoilFLGTKKDVDSIVDAMLKVLENIEELRGLEHPAIKAQTQSRADRES
Ga0307473_1040814423300031820Hardwood Forest SoilNFLGSTEDTDAIVNAIHKVLENLEELRGLDHKAIRNQKLGRADRES
Ga0307478_1019086733300031823Hardwood Forest SoilDAIADAIHKVLDEIEELRGLDHQAIRNQRLGRADRES
Ga0307478_1076439423300031823Hardwood Forest SoilIADAIHKVLENIEELRGLDHKAIRNQRLGRADRES
Ga0318512_1065061623300031846SoilLGTTKDVNDIADAIHKVLENIEELRGLDHKAIRNQRLGRADRES
Ga0318527_1020550813300031859SoilQSFLGSSEDTDTIADAIEKVLANIEELRGLDHKAIQNQRLGRADRES
Ga0306919_1068322413300031879SoilVNDIADAIHKVLENIEELRDLDHKAIRNQRLGRADRES
Ga0306925_1096352623300031890SoilAIANAIHKVLENVEDLRGLDHKAIRNQKLGRADRES
Ga0318520_1066064313300031897SoilENVDSIADAIFKVLENIEEVRGLDHKAIKTQGMSRAERES
Ga0306923_1092952023300031910SoilTIADAIEKVLAIIEELRGLDHKAIQNQRLGRADRES
Ga0306923_1100234713300031910SoilVDDIAEAIHKVLENIEELRGLDHKAVRNQRLGRADRES
Ga0310910_1146045613300031946SoilTNFLGSSEDTDTIAGAIEKVLAIIEELRGLDHKAIQNQRLGRADRES
Ga0318530_1011144613300031959SoilKKDVDSIVDAMLKVLENIEELRGLEHPAIKAQTQSRADRES
Ga0307479_1023860833300031962Hardwood Forest SoilNVDSIVNAISKVLENIEELRGLEHRAIRDQGLSRADRES
Ga0307479_1147606613300031962Hardwood Forest SoilADVDAIAEAIHKVLTNVEELRGLDHKAIRNQRLGRADRES
Ga0307479_1178403613300031962Hardwood Forest SoilEAIWFPHYLFLGDKKEIDTIIDAIFKTLDNIEELRGLEHAAIRAQGQSRADRES
Ga0306922_1086267113300032001SoilGPQKDVDDIVDTIHKVLENIEDLRNLDHKAIRNQRLGRADRES
Ga0307470_1152284623300032174Hardwood Forest SoilLGTTKDVDDIADAIHKVLASIEELRGLDHKAIRNQRLGRADRES
Ga0307471_10048250933300032180Hardwood Forest SoilKEIDTIIDAIFKAMENIEELRGLDHPAIRSQSLSRADRES
Ga0307471_10335295923300032180Hardwood Forest SoilFLGGKENVDSIADAIFKVLENIEELRGLEHRAIKAQGQSRADRES
Ga0306920_10187958313300032261SoilQNFLGSSEDTDTIADAIEKVLANIEELRGLEHKAIQNQRLGRADRES
Ga0306920_10359373323300032261SoilKDVDDIVDAIHKVLENIEDLRNLDHKAIRNQRLGRADRES
Ga0335079_1058485323300032783SoilWFPHYLFLGNKEDIDSIVEAIFKTLDNIEELRGLEHPAIKNQGLSRADRES
Ga0335078_1173284223300032805SoilSIVEAIFKTLENIEELRGLEHPAIRNQGLSRADRES
Ga0335072_1179527613300032898SoilQHFLGPGKDVDDIADAIHKILENVEELRGLDHKAIRNQRLGRADRES
Ga0335073_1004309263300033134SoilDAISEAIFKVMKNIEELRGLDHKAIRNQKLGRADRES
Ga0335077_1193679523300033158SoilDDIADAIHKVLDNIEELRGLDHKAIRNQKLGRADRES
Ga0370483_0077873_960_10673300034124Untreated Peat SoilMVEAMQKVLKNIENLRGLDHKAIRNQRLSRADRES

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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