Metagenome / Metatranscriptome Family F041898

Basic Information
Family ID	F041898
Family Type	Metagenome / Metatranscriptome
Number of Sequences	159
Average Sequence Length	74 residues
Representative Sequence	MMTKGEFLNRFRRQPDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIARNPALRQS
Number of Associated Samples	123
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	74.84 %
% of genes near scaffold ends (potentially truncated)	27.67 %
% of genes from short scaffolds (< 2000 bps)	87.42 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (67.925 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (14.465 % of family members)
Environment Ontology (ENVO)	Unclassified (25.157 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.233 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.00% β-sheet: 29.33% Coil/Unstructured: 38.67%
Feature Viewer

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Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF03976	PPK2	3.77
PF13545	HTH_Crp_2	2.52
PF02586	SRAP	1.89
PF08239	SH3_3	1.26
PF04519	Bactofilin	0.63
PF01183	Glyco_hydro_25	0.63
PF05532	CsbD	0.63
PF07486	Hydrolase_2	0.63
PF06904	Extensin-like_C	0.63
PF00571	CBS	0.63
PF01471	PG_binding_1	0.63
PF10685	KGG	0.63
PF09361	Phasin_2	0.63
PF03734	YkuD	0.63
PF10028	DUF2270	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	3.77
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	1.89
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.63
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.63
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.63
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.63
COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	Cell wall/membrane/envelope biogenesis [M]	0.63
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	0.63
COG3921	Uncharacterized conserved protein, contains Extensin-like_C domain	Function unknown [S]	0.63

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
All Organisms	root	All Organisms	32.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
cellular organisms	root	All Organisms → cellular organisms	32.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.90 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	2.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.50 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	2.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.43 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2.52 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	2.52 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2.52 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.63 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.52 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	2.52 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2.52 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	0.63 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	2.52 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.52 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2.52 %
Methyloceanibacter marginalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	0.63 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Methylobacterium sp. 77	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 77	2.52 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.52 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2.52 %
Methyloceanibacter marginalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	0.63 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_9131827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5870	Open in IMG/M
3300000890\|JGI11643J12802_10090453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1879	Open in IMG/M
3300000891\|JGI10214J12806_12018935	Not Available	596	Open in IMG/M
3300000953\|JGI11615J12901_11106625	Not Available	636	Open in IMG/M
3300000955\|JGI1027J12803_101032085	Not Available	508	Open in IMG/M
3300000956\|JGI10216J12902_111619666	Not Available	518	Open in IMG/M
3300000956\|JGI10216J12902_113251633	Not Available	687	Open in IMG/M
3300003324\|soilH2_10277063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	1467	Open in IMG/M
3300004114\|Ga0062593_100370672	All Organisms → cellular organisms → Bacteria	1263	Open in IMG/M
3300004114\|Ga0062593_102806173	Not Available	556	Open in IMG/M
3300004156\|Ga0062589_100492360	Not Available	1030	Open in IMG/M
3300004157\|Ga0062590_101106498	Not Available	764	Open in IMG/M
3300004157\|Ga0062590_101687743	Not Available	645	Open in IMG/M
3300004463\|Ga0063356_100194634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2382	Open in IMG/M
3300004479\|Ga0062595_100313783	Not Available	1066	Open in IMG/M
3300004479\|Ga0062595_102517803	Not Available	514	Open in IMG/M
3300004633\|Ga0066395_10301637	Not Available	876	Open in IMG/M
3300004633\|Ga0066395_10473174	Not Available	718	Open in IMG/M
3300005294\|Ga0065705_10927514	Not Available	560	Open in IMG/M
3300005327\|Ga0070658_10945243	Not Available	749	Open in IMG/M
3300005328\|Ga0070676_10634764	Not Available	774	Open in IMG/M
3300005331\|Ga0070670_100160136	All Organisms → cellular organisms → Bacteria → Proteobacteria	1951	Open in IMG/M
3300005332\|Ga0066388_100679020	All Organisms → cellular organisms → Bacteria → Proteobacteria	1640	Open in IMG/M
3300005332\|Ga0066388_101639487	Not Available	1134	Open in IMG/M
3300005332\|Ga0066388_102146732	Not Available	1006	Open in IMG/M
3300005332\|Ga0066388_103872930	Not Available	763	Open in IMG/M
3300005332\|Ga0066388_106326192	Not Available	597	Open in IMG/M
3300005332\|Ga0066388_106429327	Not Available	592	Open in IMG/M
3300005341\|Ga0070691_10444629	Not Available	739	Open in IMG/M
3300005347\|Ga0070668_101060858	Not Available	730	Open in IMG/M
3300005441\|Ga0070700_101064040	Not Available	669	Open in IMG/M
3300005459\|Ga0068867_101070251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 77	735	Open in IMG/M
3300005468\|Ga0070707_101575832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 77	624	Open in IMG/M
3300005530\|Ga0070679_100665577	Not Available	984	Open in IMG/M
3300005536\|Ga0070697_102021921	Not Available	516	Open in IMG/M
3300005616\|Ga0068852_100012971	All Organisms → cellular organisms → Bacteria	6358	Open in IMG/M
3300005617\|Ga0068859_100789688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1037	Open in IMG/M
3300005713\|Ga0066905_100896589	All Organisms → cellular organisms → Bacteria → Proteobacteria	776	Open in IMG/M
3300005719\|Ga0068861_101418988	Not Available	679	Open in IMG/M
3300005764\|Ga0066903_100266319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2666	Open in IMG/M
3300005764\|Ga0066903_103427587	Not Available	855	Open in IMG/M
3300005764\|Ga0066903_106917339	Not Available	589	Open in IMG/M
3300005764\|Ga0066903_107274922	Not Available	572	Open in IMG/M
3300005764\|Ga0066903_108075357	Not Available	539	Open in IMG/M
3300005764\|Ga0066903_108259819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 77	532	Open in IMG/M
3300005834\|Ga0068851_10464142	Not Available	754	Open in IMG/M
3300005843\|Ga0068860_100438339	Not Available	1297	Open in IMG/M
3300005844\|Ga0068862_100027059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4824	Open in IMG/M
3300006175\|Ga0070712_102022178	Not Available	505	Open in IMG/M
3300006806\|Ga0079220_11610981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 77	563	Open in IMG/M
3300006881\|Ga0068865_100682661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	876	Open in IMG/M
3300007076\|Ga0075435_101284727	Not Available	641	Open in IMG/M
3300009094\|Ga0111539_10190039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2396	Open in IMG/M
3300009098\|Ga0105245_10862912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	946	Open in IMG/M
3300009147\|Ga0114129_11338492	Not Available	886	Open in IMG/M
3300009148\|Ga0105243_10008386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7930	Open in IMG/M
3300009156\|Ga0111538_11790666	Not Available	773	Open in IMG/M
3300009174\|Ga0105241_10072029	All Organisms → cellular organisms → Bacteria → Proteobacteria	2684	Open in IMG/M
3300009792\|Ga0126374_10576937	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	826	Open in IMG/M
3300009792\|Ga0126374_11249860	Not Available	597	Open in IMG/M
3300010043\|Ga0126380_10897713	Not Available	736	Open in IMG/M
3300010046\|Ga0126384_10027793	All Organisms → cellular organisms → Bacteria → Proteobacteria	3725	Open in IMG/M
3300010047\|Ga0126382_10557420	Not Available	934	Open in IMG/M
3300010048\|Ga0126373_10287028	All Organisms → cellular organisms → Bacteria	1635	Open in IMG/M
3300010360\|Ga0126372_10090380	All Organisms → cellular organisms → Bacteria → Proteobacteria	2263	Open in IMG/M
3300010360\|Ga0126372_11254979	Not Available	768	Open in IMG/M
3300010360\|Ga0126372_11539967	Not Available	702	Open in IMG/M
3300010362\|Ga0126377_10032367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4430	Open in IMG/M
3300010362\|Ga0126377_12890346	Not Available	554	Open in IMG/M
3300010366\|Ga0126379_10135457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2267	Open in IMG/M
3300010366\|Ga0126379_10327039	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1552	Open in IMG/M
3300010366\|Ga0126379_11021582	Not Available	932	Open in IMG/M
3300010371\|Ga0134125_10551339	Not Available	1275	Open in IMG/M
3300010376\|Ga0126381_104491878	Not Available	539	Open in IMG/M
3300010396\|Ga0134126_12120980	Not Available	614	Open in IMG/M
3300010398\|Ga0126383_10419080	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300010398\|Ga0126383_12163494	Not Available	643	Open in IMG/M
3300010398\|Ga0126383_12634626	Not Available	586	Open in IMG/M
3300010400\|Ga0134122_10475145	Not Available	1125	Open in IMG/M
3300010403\|Ga0134123_10145407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1954	Open in IMG/M
3300012353\|Ga0137367_10848192	Not Available	632	Open in IMG/M
3300012355\|Ga0137369_10741380	Not Available	673	Open in IMG/M
3300012885\|Ga0157287_1051696	Not Available	649	Open in IMG/M
3300012892\|Ga0157294_10027095	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300012896\|Ga0157303_10130174	Not Available	650	Open in IMG/M
3300012897\|Ga0157285_10151381	Not Available	690	Open in IMG/M
3300012898\|Ga0157293_10090001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	771	Open in IMG/M
3300012903\|Ga0157289_10083030	Not Available	883	Open in IMG/M
3300012906\|Ga0157295_10268408	Not Available	580	Open in IMG/M
3300012908\|Ga0157286_10192240	Not Available	682	Open in IMG/M
3300012911\|Ga0157301_10064343	Not Available	987	Open in IMG/M
3300012971\|Ga0126369_10209726	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1886	Open in IMG/M
3300013096\|Ga0157307_1016038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1201	Open in IMG/M
3300013296\|Ga0157374_11710700	Not Available	654	Open in IMG/M
3300013297\|Ga0157378_10490001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1226	Open in IMG/M
3300013306\|Ga0163162_10046738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4339	Open in IMG/M
3300013308\|Ga0157375_10041763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4431	Open in IMG/M
3300013308\|Ga0157375_10152140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2450	Open in IMG/M
3300014968\|Ga0157379_10208866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1767	Open in IMG/M
3300014969\|Ga0157376_10384172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1353	Open in IMG/M
3300015201\|Ga0173478_10332055	Not Available	702	Open in IMG/M
3300015372\|Ga0132256_102813432	Not Available	585	Open in IMG/M
3300015372\|Ga0132256_103450594	Not Available	531	Open in IMG/M
3300015374\|Ga0132255_105891816	Not Available	519	Open in IMG/M
3300016270\|Ga0182036_10278871	Not Available	1262	Open in IMG/M
3300016341\|Ga0182035_10009372	Not Available	5662	Open in IMG/M
3300016357\|Ga0182032_10675370	Not Available	865	Open in IMG/M
3300019356\|Ga0173481_10080333	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300019356\|Ga0173481_10721544	Not Available	541	Open in IMG/M
3300019361\|Ga0173482_10076098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1162	Open in IMG/M
3300019361\|Ga0173482_10756294	Not Available	510	Open in IMG/M
3300019362\|Ga0173479_10022409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1818	Open in IMG/M
3300019362\|Ga0173479_10904544	Not Available	500	Open in IMG/M
3300020080\|Ga0206350_10552833	Not Available	517	Open in IMG/M
3300020082\|Ga0206353_11994115	Not Available	505	Open in IMG/M
3300021560\|Ga0126371_10207400	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2058	Open in IMG/M
3300021560\|Ga0126371_10230266	Not Available	1961	Open in IMG/M
3300021560\|Ga0126371_10621349	Not Available	1229	Open in IMG/M
3300021560\|Ga0126371_12947869	Not Available	576	Open in IMG/M
3300023072\|Ga0247799_1038837	Not Available	770	Open in IMG/M
3300023261\|Ga0247796_1040046	Not Available	790	Open in IMG/M
3300023261\|Ga0247796_1052756	Not Available	711	Open in IMG/M
3300023263\|Ga0247800_1059368	Not Available	714	Open in IMG/M
3300025899\|Ga0207642_10953431	Not Available	551	Open in IMG/M
3300025905\|Ga0207685_10106699	Not Available	1207	Open in IMG/M
3300025906\|Ga0207699_10209647	Not Available	1324	Open in IMG/M
3300025907\|Ga0207645_10070077	All Organisms → cellular organisms → Bacteria → Proteobacteria	2243	Open in IMG/M
3300025916\|Ga0207663_10903795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	706	Open in IMG/M
3300025918\|Ga0207662_10034400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	2957	Open in IMG/M
3300025927\|Ga0207687_11350633	Not Available	613	Open in IMG/M
3300025927\|Ga0207687_11735463	Not Available	535	Open in IMG/M
3300025935\|Ga0207709_10396604	Not Available	1054	Open in IMG/M
3300025939\|Ga0207665_10002666	All Organisms → cellular organisms → Bacteria	11990	Open in IMG/M
3300025942\|Ga0207689_10228061	Not Available	1539	Open in IMG/M
3300025945\|Ga0207679_10762792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	880	Open in IMG/M
3300027874\|Ga0209465_10265179	Not Available	860	Open in IMG/M
3300027876\|Ga0209974_10104820	Not Available	991	Open in IMG/M
3300027909\|Ga0209382_10274845	All Organisms → cellular organisms → Bacteria	1906	Open in IMG/M
3300031545\|Ga0318541_10606573	Not Available	612	Open in IMG/M
3300031573\|Ga0310915_10180440	Not Available	1471	Open in IMG/M
3300031719\|Ga0306917_10890309	Not Available	697	Open in IMG/M
3300031744\|Ga0306918_10396588	Not Available	1075	Open in IMG/M
3300031744\|Ga0306918_11278502	Not Available	565	Open in IMG/M
3300031747\|Ga0318502_11033821	Not Available	501	Open in IMG/M
3300031770\|Ga0318521_10977318	Not Available	519	Open in IMG/M
3300031781\|Ga0318547_10801491	Not Available	587	Open in IMG/M
3300031835\|Ga0318517_10521960	Not Available	535	Open in IMG/M
3300031879\|Ga0306919_10138276	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300031879\|Ga0306919_10674293	Not Available	797	Open in IMG/M
3300031896\|Ga0318551_10447420	Not Available	738	Open in IMG/M
3300031910\|Ga0306923_10481885	Not Available	1404	Open in IMG/M
3300031910\|Ga0306923_11412493	Not Available	732	Open in IMG/M
3300031912\|Ga0306921_11452424	Not Available	752	Open in IMG/M
3300031940\|Ga0310901_10249989	Not Available	727	Open in IMG/M
3300031941\|Ga0310912_11094473	Not Available	609	Open in IMG/M
3300031945\|Ga0310913_10473063	Not Available	890	Open in IMG/M
3300032063\|Ga0318504_10561492	Not Available	548	Open in IMG/M
3300032180\|Ga0307471_102258901	Not Available	686	Open in IMG/M
3300033289\|Ga0310914_10495655	Not Available	1105	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.47%
Host-Associated	Host-Associated	24.53%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.47%
Plants	Host-Associated → Plants	24.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.49%
Loam	Environmental → Terrestrial → Soil → Loam	16.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.18%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.06%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.40%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.14%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.26%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.26%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.26%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.63%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.63%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_01149290	2088090015	Soil	MMTKGEFLNRFQRQPDGAWCCTKPLKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIARNPALRQS
JGI11643J12802_100904533	3300000890	Soil	MMTKGEFLNRFQRQPDGAWCCTKPIKVDGPSGPFTIRQGVIFNPGALLLGLDLAKELDRLAAEERIQRNPALRQG*
JGI10214J12806_120189351	3300000891	Soil	MMTKGEFLDRFQRQPDGAWCCTKPIKVDGPSGPFTIRQGVVFSPGALLLGLDVAKELDRMAAEEHIARNPALRQS*
JGI11615J12901_111066251	3300000953	Soil	MMTKGEFLNRFQRQPDGAWCCTKPIKVEGPSGPFTIRPGVVFNPGALMLGLDLAKELDRMAAEERIARNPALRQS*
JGI1027J12803_1010320852	3300000955	Soil	ARAMMTKGEFLNRFQRQPDGAWCCTKPLKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIARNPALRQS*
JGI10216J12902_1116196661	3300000956	Soil	MMTQGEFLNRFQRQPVVAWCCTKPIKVDGPSGPFTIKQGVIFSPGALMLGLDLAKELDRMAAEERIARNPALRQS*
JGI10216J12902_1132516331	3300000956	Soil	RAMMTKGEFLNRFQRQPDGAWCCTKPIKVEGPSGPFTIRPGVVFNPGALMLGLDLAKELDRMAAEERIARNPALRQS*
soilH2_102770632	3300003324	Sugarcane Root And Bulk Soil	MMTKGEFLHRFERQPDGAWCCTKPIKVDGPSGPFTIRHGVIFNPGALLLGLDIAKELDRMAAEERIQGNPVLRHS*
Ga0062593_1003706721	3300004114	Soil	MMTKVEFLNRFQRQPDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAA
Ga0062593_1028061732	3300004114	Soil	VGARAMMTKGEFLNRFHRQPVGAWCCTKPIKVDGPSGPFTIRQGVIFNPGALLLGLDIAKELDRMAAEERIGQNSVLQQS*
Ga0062589_1004923604	3300004156	Soil	MMTKGEFLTRFQRQPDGAWCCTKPIKIDGPTGPFTIRQGVIFNPGARLLGLDLAKELDRMAAEERIARNSALRQS*
Ga0062590_1011064982	3300004157	Soil	MMTKGEFLNRFQRQPDGAWCCTNPIKVEGPSGPFTIRQGVIFHPGALLLGLDLAKELDRMAAEERIGTNPGTATKR*
Ga0062590_1016877431	3300004157	Soil	MMTKGEFLNRFQRQPDGAWYCTKSIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIATNPALRQS*
Ga0063356_1001946342	3300004463	Arabidopsis Thaliana Rhizosphere	MMTKGEFLNRFQRQPDGAWCCTKPLKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIARNPALRQS*
Ga0062595_1003137831	3300004479	Soil	FLTRFQRQPDGAWCCTKPIKIDGPTGPFTIRQGVIFNPGARLLGLDLAKELDRMAAEERIARNSALRQS*
Ga0062595_1025178031	3300004479	Soil	VGARAMMTKGEFLNRFQRQPDGAWCCTKPLKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIARNPALRQS*
Ga0066395_103016372	3300004633	Tropical Forest Soil	MMTKGEFLNRFQRQPDGAWCCTKPINVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIARNPALRQS*
Ga0066395_104731742	3300004633	Tropical Forest Soil	MMTKVEFLNRFQRQPDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIARNPALSQG*
Ga0065705_109275141	3300005294	Switchgrass Rhizosphere	MMTKGEFLDRFQRQPDGAWCCTKPIKVDGPSGPFTIRQGVVFSPGALLLGLDVAKELDRMAAEERIARNPALRQS*
Ga0070658_109452432	3300005327	Corn Rhizosphere	MMTKGEFLNRFQRQPDGAWCCKKAIKVDGPSGPFTIRQGVIFNPGALLLGLDIAKELDRWAAEERIQRNPALRQG*
Ga0070676_106347642	3300005328	Miscanthus Rhizosphere	MMTEGEFLNRFQRQPDGAWCCKKAIKVDGPSGPFTIRQGVIFNPGALLLGLDIAKELDRWAAEERIQRNPALRQG*
Ga0070670_1001601361	3300005331	Switchgrass Rhizosphere	TKGEFLNRFQRQPDGAWCCKKPIKVEGPSGPFTIRQGVIFNPGALLLGLDIAKELDRWAAEERIQRNPALRQG*
Ga0066388_1006790202	3300005332	Tropical Forest Soil	MMTKGEFLNRFQRQPDGAWCCTSPIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIARNPALRQS*
Ga0066388_1016394871	3300005332	Tropical Forest Soil	MMTKGEFLNRFRRQPDGAWCCTKPIKVEGPSGPFTIRQGVLFNPGALLLGLDLAKELDRMAAEEGVARNSVLRQN*
Ga0066388_1021467322	3300005332	Tropical Forest Soil	MMTKGEFLNRFHRQPDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLLGLDLAQELDRMAAEERIAKNSALQQS*
Ga0066388_1038729302	3300005332	Tropical Forest Soil	MMTKGEFLSRFHRQPDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLLGLDLAQELDRMAAEERIAKM*
Ga0066388_1063261921	3300005332	Tropical Forest Soil	MMTKGEFLNRFHRQPDGAWCCTKPIKVDGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERVVRNSVLRQS*
Ga0066388_1064293272	3300005332	Tropical Forest Soil	MMTKGEFLNRFQRQPDGAWCCTKPINVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERVARNSVLRQS*
Ga0070691_104446292	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MMTKGEFLNRFQRQPDGAWYCTKSIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIARNSALRQS*
Ga0070668_1010608583	3300005347	Switchgrass Rhizosphere	MMTKGEFLDRFQRQPDGAWCCTKPIKVDGPSGPFTIRQGVVFSPGALLLGLDVAKELDRMAAEERIARNSALRQS*
Ga0070700_1010640401	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MMTKGEFLNRFQRQPDGAWCCKKPIKVDGPSGPFTIRQGVIFNPGALVLGLDLAKELDRWAAEERIQRNPALRQG*
Ga0068867_1010702511	3300005459	Miscanthus Rhizosphere	MMTKGEFLNRFQRQPDGAWCCKKAIKVDGPSGPFTIRQGVIFNPGARLLGLDLAKELDRMAAEERIATNPALRQS*
Ga0070707_1015758321	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MMTKGEFLNRFQRQPDGAWCCKKAIKVDGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIATNPALRQS*
Ga0070679_1006655772	3300005530	Corn Rhizosphere	MMTKGEFLNRFQRQPDGAWCCKKPIKVDGPSGPFTIRQGVIFKPGPLLLGLDLAKELDRWAAEERIQRNPALRQG*
Ga0070697_1020219211	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MMTKGEFLNRFQRQPDGAWYCTKSIKVEGPSGPFTIRQGAIFNPGALLLGLDLAKELDRMAAEERIATNPALRQS*
Ga0068852_10001297112	3300005616	Corn Rhizosphere	MMTKGEFLNRFQRQPDGAWCCKKAIKVDGPSGPFTIRQGVIFNPGALLLGLDIAKELDRWAAEER
Ga0068859_1007896883	3300005617	Switchgrass Rhizosphere	MMTKGEFLNRFQRQPDGAWCCKKPIKVEGPSGPFTIRQGVIFNPGALLLGLDIAKELDRWAAEERIQRNPALRQG*
Ga0066905_1008965892	3300005713	Tropical Forest Soil	QPDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLMGLDLAKELDRMAAEERVARNSVLRQS*
Ga0068861_1014189881	3300005719	Switchgrass Rhizosphere	RAMMTKGEFLNRFQRQPDGAWYCTKSIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIATNPALRQS*
Ga0066903_1002663192	3300005764	Tropical Forest Soil	MMTKGEFLNRFQRQPDGAWCCTKSIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAVEERIARNPALRQN*
Ga0066903_1034275872	3300005764	Tropical Forest Soil	MMTKGEFLNRFQRQSDGAWCCTKAIKVDGPSGPLTIRQGVIFNPGALLLGLDLAKELDRMAAEERVARNSVLRQS*
Ga0066903_1069173391	3300005764	Tropical Forest Soil	MMTKGEFLNRFRRQPDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEE
Ga0066903_1072749221	3300005764	Tropical Forest Soil	RQPDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIARSSALRQS*
Ga0066903_1080753572	3300005764	Tropical Forest Soil	ARAMMTKGEFLNRFQRQPDGAWCCTKPINVEGPSGPFTIREGVIFNPGALLLGLDLAKELDRMAAEERIARNPALRQS*
Ga0066903_1082598191	3300005764	Tropical Forest Soil	MMTKGEFLNRFHRQPDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERVARNSVLRQS*
Ga0068851_104641422	3300005834	Corn Rhizosphere	MMTKGEFLNRFQRQPDGAWCCKKAIKVDGPSGPFTIRQGVIFNPGALLLGLDLAKELDRWAAEERIQRNPALRQG*
Ga0068860_1004383391	3300005843	Switchgrass Rhizosphere	GARAMMTKGEFLNRFQRQPDGAWCCKKAIKVDGPSGPFTIRQGVIFNPGALLLGLDIAKELDRWAAEERIQRNPALRQG*
Ga0068862_1000270591	3300005844	Switchgrass Rhizosphere	MMTKGEFLNRFQRQPDGAWCCKKPIKVDGPSGPFTIRQGVIFNPGALLLGLDIAKELDRWAAEERIQRNPALRQG*
Ga0070712_1020221781	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MMTKVEFLNRFQRQPDGAWCCTKPIKVEGPSGPFTIRQGVIFIPGALLLGLDLAKELDRMAAEERIARHPALRQG*
Ga0079220_116109811	3300006806	Agricultural Soil	MMTKGEFLTRFQRQPDGAWCCTKPIKIDGPTGPFTIRQGVIFNPGARLLGLDLAKELDRMAAEERVVRNSVLRQS*
Ga0068865_1006826611	3300006881	Miscanthus Rhizosphere	GEFLNRFQRQPDGAWYCTKSIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIATNPALRQS*
Ga0075435_1012847271	3300007076	Populus Rhizosphere	MMTKGEFLNRFQRQPDGAWCCKKAIKVDGPSGPFTIRQGVIFNPGALLLGLDIAKDLDRWAAEERIQRNPALRQG*
Ga0111539_101900392	3300009094	Populus Rhizosphere	MTKGEFLNRFQRQPDGAWCCKKAIKVDGPSGPFTIRQGVIFNPGALLLGLDIAKELDRWAAEERIQRNPALRQG*
Ga0105245_108629121	3300009098	Miscanthus Rhizosphere	MMTKGEFLNRFQRQPDGAWYCTKSIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIATNPALRTDRSL*
Ga0114129_113384921	3300009147	Populus Rhizosphere	MMAKGEFLNRFQRQPDGAWYCTKSIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIATNPALRQS*
Ga0105243_100083862	3300009148	Miscanthus Rhizosphere	MMTKGEFLNRFQRQPDGAWCCKKPIKVDGPSGPFTIRQGVIFNPGPLLLGLDLAKELDRWAAEERIQRNPALRQG*
Ga0111538_117906661	3300009156	Populus Rhizosphere	GARAMMTKGEFLTRFQRQPDGAWYCTKSIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIATNPALRQS*
Ga0105241_100720292	3300009174	Corn Rhizosphere	MMTKGEFLNRFQRQPDGAWCCKKAIKVDGPSGPFTIRQGVIFNPGALVLGLDLAKELDRWAAEERIQRNPALRQG*
Ga0126374_105769372	3300009792	Tropical Forest Soil	MMTKVEFLNRFQRQPDGAWCCTKPIKVEGPSGPFTIRQGVVFNPGALLLGLDLAKELDRMAAEERIARNPALRQS*
Ga0126374_112498601	3300009792	Tropical Forest Soil	MMTKGEFLNRFHRQPDGAWCCTKPIKVDGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIARNPALSQG*
Ga0126380_108977131	3300010043	Tropical Forest Soil	MMTKGEFLNRFHRQPDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERVVRNSVLRQS*
Ga0126384_100277934	3300010046	Tropical Forest Soil	MMTKVEFLNRFRRQPDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIARNPALSQG*
Ga0126382_105574203	3300010047	Tropical Forest Soil	MMTKGEFLNRFHRQPGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERVARNSVLRQS*
Ga0126373_102870282	3300010048	Tropical Forest Soil	MMTKGEFLNRFQRQPDGAWCCTKSIKVEGPSGPFTIRQGVIFNPGAVLLGLDLAKELDRMAVEERIARNPALRQN*
Ga0126372_100903801	3300010360	Tropical Forest Soil	MMTKVEFLNRFQRQPDGAWCCTKPIKVEGPSGPFTIRQGVLFNPGALLLGLDLAKELDRMAAEERIARNPALSQG*
Ga0126372_112549791	3300010360	Tropical Forest Soil	MMTKGEFLNRFHRQPDGAWCCTKPIKVEGPSGPFTIRQGLIFNPGALLLGLDLAKELDRMAAEERIARNPALRQS*
Ga0126372_115399672	3300010360	Tropical Forest Soil	MMTKGEFLNRFQRQPDGAWCCTKPIKVDGPSGPFTIRQGVIFNPGALLLGLDLAQELDRMAAEERIAKNSALQQS*
Ga0126377_100323672	3300010362	Tropical Forest Soil	MMTKVEFLNRFQRQPDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLLGIDLAKELDRMAAEERIARNPALQQS*
Ga0126377_128903462	3300010362	Tropical Forest Soil	LNRFHRQPDGAWCCTKPIKVDGPSGSFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIGQNSVLRQN*
Ga0126379_101354571	3300010366	Tropical Forest Soil	MMTKVEFLNRFQRQPDGAWCCTKPIKVEGPSGFFTIRQGVIFNPGALLLGLDLAQELDRMAAEERIAKNSALQQS*
Ga0126379_103270392	3300010366	Tropical Forest Soil	MMTKVEFLNRFQRQPDGAWCCTKPINVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIARNPALSQG*
Ga0126379_110215822	3300010366	Tropical Forest Soil	MMTKGEFLNRFQRQPDGAWCCTKPINVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIAR
Ga0134125_105513392	3300010371	Terrestrial Soil	MMTKGEFLVRFQRQPDGVWCCTKPITIEGPRGAFTIKQGTRFSPGGSLLGLDLAKELDRLAAEHRIEANPALRPS*
Ga0126381_1044918782	3300010376	Tropical Forest Soil	EFLNRFHRQPDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERVARNSVLRQS*
Ga0134126_121209801	3300010396	Terrestrial Soil	RQPDGAWYCTKSIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIATNPALRQS*
Ga0126383_104190803	3300010398	Tropical Forest Soil	LNRFQRQPDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIARNPALSQG*
Ga0126383_121634941	3300010398	Tropical Forest Soil	MMTKVEFLNRFRRQPDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAERIARSSALRQS*
Ga0126383_126346262	3300010398	Tropical Forest Soil	MMTKGEFLNRFQRQPDGAWCCTKPINVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIAKNSALQQS*
Ga0134122_104751452	3300010400	Terrestrial Soil	MMTKGEFLNRFERQPDGAWYCTKSIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIATNPALRQS*
Ga0134123_101454072	3300010403	Terrestrial Soil	MMTKGEFLNRFQRQPDGAWYCTKSIKVEGPSGTFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIATNPALRQS*
Ga0137367_108481921	3300012353	Vadose Zone Soil	MMTKGEFLNRFQRQPDGAWCCTKPIKIDGPSGPFTIRQGVIFSPGALLFGLDLAKELDRMAAEERIQRNPALRQS*
Ga0137369_107413801	3300012355	Vadose Zone Soil	MTKGEFLNRFQRQPEGAWCCTKTIKIDGPSGSFTIRQGVTFSPGALLLGLDLAKELDRMAAEERIQTNPALRQG*
Ga0157287_10516962	3300012885	Soil	NRFQRQPDGAWCCKKAIKVDGPSGPFTIRQGVIFNPGALLLGLDIAKELDRWAAEERIQRNPALRQG*
Ga0157294_100270951	3300012892	Soil	MMTKGEFLNRFQRQPDGAWCCTKPINVEGPSSPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIATNPALRQS*
Ga0157303_101301741	3300012896	Soil	MMTKGEFLNRFQRQPDGAWYCTKSIKVEGPSGPFTIRQGVIFNPGARLLGLDLAKELDRMAAEERIARNSALRQS*
Ga0157285_101513812	3300012897	Soil	MMTKGEFLNRFQRQPDGAWYCTKSIKVDGPTGAFTIRQGVIFNPGALLLGLDLAKELDRMAAE
Ga0157293_100900011	3300012898	Soil	MMTKGEFLNRFQRQPDGAWYCTKSIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAE*
Ga0157289_100830302	3300012903	Soil	MMTKGEFLNRFQRQPDGAWYCTKSIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRWAAEERIQRNPALRQG*
Ga0157295_102684082	3300012906	Soil	QRQPDGAWCCTKPIKVDGPSGPFTIRQGVVFSPGALLLGLDVAKELDRMAAEEHIARNPALRQS*
Ga0157286_101922401	3300012908	Soil	MMTKGEFLNRFQRQPDGAWYCTKSIKVDGPTGAFTIRQGVIFNPGALLLGLDLAKELDRMAAEERVATNPALRQS*
Ga0157301_100643431	3300012911	Soil	MMTKGEFLNRFQRQPDGAWYCTKSIKVEGPSGPFTIRQGVMFNPGALLLGLDLAKELDRMAAEERIATNPALRQS*
Ga0126369_102097263	3300012971	Tropical Forest Soil	MMTKVEFLNRFQRQPDGAWCCTKPIKVEGPSGPFTIRQGVLFNPGALLLGLDPAKELDRMAAEERVVRNSVLRQS*
Ga0157307_10160383	3300013096	Soil	MMTKGEFLNRFQRQPDGAWYCTKSIKVEGPSGPFTIRQGVVFSPGALLLGLDVAKELDRMAAEEHIARNPALRQS*
Ga0157374_117107001	3300013296	Miscanthus Rhizosphere	RAMMTKGEFPNRFQRQPDGAWYCTKSIKVDGPTGAFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIATNPALRQS*
Ga0157378_104900012	3300013297	Miscanthus Rhizosphere	MMTKGEFLNRFQRQPDGAWYCTKSIKVEGPSGPFTIRQGVIFNPGALLLCLDLAKELDRTAAEERIATNPALRQS*
Ga0163162_1004673810	3300013306	Switchgrass Rhizosphere	QRQPDGAWCCKKPIKVDGPSGPFTIRQGVIFNPGALLLGLDIAKELDRWAAEERIQRNPALRQG*
Ga0157375_100417631	3300013308	Miscanthus Rhizosphere	AMMTKGEFLNRFQRQPDGAWCCKKAIKVDGPSGPFTIRQGVIFNPGALLLGLDIAKELDRWAAEERIQRNPALRQG*
Ga0157375_101521403	3300013308	Miscanthus Rhizosphere	MMTKGEFLNRFQRQPDGAWYCTKSIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIATSPALRQS*
Ga0157379_102088661	3300014968	Switchgrass Rhizosphere	MMTKGEFLNRFQRQPDGAWCCKKPIKVDGPSGPFTIRQGVIFNRGALLLGLDLAKELDRWAAEERIQRNPALRQG*
Ga0157376_103841723	3300014969	Miscanthus Rhizosphere	MMTKREFLNRFQRQPDGAWYCTKSIKVEGPSGPFSIRQGVIFNPGALLLGLDLAKELDRMAAEERIATNPALRQS*
Ga0173478_103320551	3300015201	Soil	MMTKGEFLTRFQRQPDGAWCCTKPIKIDGPTGPFTIRQGVIFNPGARLLGLDLAKELDRMAAE*
Ga0132256_1028134322	3300015372	Arabidopsis Rhizosphere	MMAKGEFLDRFQRQPDGAWCCTKPIKVDGPSGPFTIRQGVVFSPGALLLGLDVAKELDRMAAEERIARNPALRES*
Ga0132256_1034505941	3300015372	Arabidopsis Rhizosphere	MMTKVEFLNRFQRQPDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIARNPALP*
Ga0132255_1058918161	3300015374	Arabidopsis Rhizosphere	MMTKGEFLNRFQRQPDGAWCCKKAIKVDGPSGPFTIRQGVIFNPGARLLGLDLAKELDRMAAEERIARNSALRQS*
Ga0182036_102788712	3300016270	Soil	MMTKGEFLNRFQRQSDGAWCCTKAIKVDGPSGPFTIRQGVIFNPGALLLGIDLAKELDRMAAEERIAQFGGPTKLI
Ga0182035_100093722	3300016341	Soil	MTKGEFLNRFQRQPDGAWCCTKPINVEGPSGPFTIRPGVIFNPGALLLGLDLAKEVDRMAAEERIATPPPIS
Ga0182032_106753701	3300016357	Soil	MMTKGEFLNRFQRQSDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLMGLDLAKELDRMAAEERIAQFGAPTKLI
Ga0173481_100803332	3300019356	Soil	MMTKGEFLNRFQRRPDGAWYCTKSIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIATNPALRQS
Ga0173481_107215441	3300019356	Soil	MMTKGEFLDRFQRQPDGAWCCTKPIKVDGPSGPFTIRQGVVFSPGALLLGLDVAKELDRMAAEEHIARNPALRQS
Ga0173482_100760983	3300019361	Soil	MMTKGEFLNRFQRQPDGAWYCTKSIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIATNPALRQS
Ga0173482_107562941	3300019361	Soil	MMTKVEFLNRFQRQPDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIARNSA
Ga0173479_100224094	3300019362	Soil	MMTKGEFLNRFQRQPDGAWCCKKAIKVDGPSGPFTIRQGVIFNPGALLLGLDIAKELDRWAAEERIQRNPALRQG
Ga0173479_109045441	3300019362	Soil	MMTKGEFLDRFQRQPDGAWCCTKPIKVDGPSGPFTIRQGVVFSPGALLLGLDVAKELDRMAAEEHIARNPALRQ
Ga0206350_105528331	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MMTKGEFLNRFQRQPDGAWCCKKAIKVDGPSGPFTIRQGVIFNPGPLLLGLDLAKELDRWAAEERIQRNPALRQG
Ga0206353_119941152	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MMTKGEFLNRFQRQPDGAWCCTKPIKVDGPSGPFTIRQGVIFNPGALLLGLDLAKDLDRMAAEERIATNPALRQS
Ga0126371_102074002	3300021560	Tropical Forest Soil	MMTKVEFLNRFQRQPDGAWCCTKPIKVEGPSGPFTIRQGVLFNPGALLLGLDLAKELDRMAAEERIARNPALSQG
Ga0126371_102302663	3300021560	Tropical Forest Soil	MMTKGEFLNRFQRQPDGAWCCTKPINVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIARNPALRQS
Ga0126371_106213492	3300021560	Tropical Forest Soil	MMTKGEFLNRFQRQSDGAWCCTKAIKVDGPSGPLTIRQGVIFNPGALLLGLDLAKELDRMAAEERVARNSVLRPS
Ga0126371_129478691	3300021560	Tropical Forest Soil	MMTKGEFLNRFHRQPDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLLGLDLAQELDRMAAEERIAKNSALQQS
Ga0247799_10388372	3300023072	Soil	MMTKGEFLNRFQRQPDGAWCCKKPIKVDGPSGPFTIRQGVIFNPGARLLGLDLAKELDRWAAEERIQRNPALRQG
Ga0247796_10400463	3300023261	Soil	MMTKGEFLNRFQRQPDGAWCCKKPIKVDGPSGPFTIRQGVIFNPGALVLGLDLAKELDRWAAEERIQRNPALRQG
Ga0247796_10527562	3300023261	Soil	MMTKGEFLDRFQRQPDGAWCCTKPIKVDGPSGPFTIRQGVVFSPGALLLGLDVAKELDRMAAEERIARNPALRQS
Ga0247800_10593682	3300023263	Soil	MMTKGEFLNRFQRQPDGAWCCKKAIKVEGPSGPFTIRQGVIFNPGALLLGLDIAKELDRLAAEERIQRNPALRQG
Ga0207642_109534312	3300025899	Miscanthus Rhizosphere	FQRQPDGAWCCKKAIKVDGPSGPFTIRQGVIFNPGALLLGLDLAQELDRWAAEERIQRNPALRQG
Ga0207685_101066993	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MMTKGEFLNRFQRQPDGAWCCKKPIKVDGPSGPFTIRQGVIFNPGALLLGLDIAKELDRWAAEERIQRNPALRQG
Ga0207699_102096473	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MMTKGEFLNRFQRQPDGAWCCKKALKVDGPSGPFTIRQGVIFNPGALLLGLDIAKELDRWAAEERIQRNPALRQG
Ga0207645_100700773	3300025907	Miscanthus Rhizosphere	MMTKGEFLNRFQRQPDGAWYCTKSIKVEGPSGPFTIRQGVIFNPGALVLGLDLAKELDRMAAEERIARNSALRQS
Ga0207663_109037951	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	FLTRFQRQPDGAWYCTKSIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIATNPALRQS
Ga0207662_100344006	3300025918	Switchgrass Rhizosphere	MMTKGEFLNRFQRQPDGAWCCKKAIKVDGPSGPFTIRQGVIFNPGALLLGLDLAKELDRWAAEERIQRNPALRQG
Ga0207687_113506331	3300025927	Miscanthus Rhizosphere	PRRSEAAISFSLRKMGARAMMTKGEFLNRFQRQPDGAWCCKKPIKVDGPSGPFTIRQGVIFNPGALLLGLDIAKELDRWAAEERIQRNPALRQG
Ga0207687_117354631	3300025927	Miscanthus Rhizosphere	MMTKGEFLNRFQRQPDGAWYCTKSIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIATNPAL
Ga0207709_103966042	3300025935	Miscanthus Rhizosphere	MMTKGEFLNRFQRQPDGAWCCKKPIKVDGPSGPFTIRQGVIFNPGPLLLGLDLAKELDRWAAEERIQRNPALRQG
Ga0207665_100026669	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTKGEFLNRFQRQPDGAWCCKKAIKVDGPSGPFTIRQGVIFNPGALLLGLDIAKELDRWAAEERIQRNPALRQG
Ga0207689_102280612	3300025942	Miscanthus Rhizosphere	MMTKGEFLNRFQRQPDGAWYCTKSIKVEGPSGPFTIRQGVIFNPGALLLGLDIAKELDRWAAEERIQRNPALRQG
Ga0207679_107627921	3300025945	Corn Rhizosphere	MMTKGEFLNRFQRQPDGAWCCKKAIKVDGPSGPFTIRQGVIFNPGALVLGLDLAKELDRWAAEERIQRNPALRQG
Ga0209465_102651792	3300027874	Tropical Forest Soil	QPDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIARNPALSQG
Ga0209974_101048201	3300027876	Arabidopsis Thaliana Rhizosphere	MMTKGEFLTRFQRQPDGAWCCTKPIKIDGPTGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIATNPALRQS
Ga0209382_102748456	3300027909	Populus Rhizosphere	MMTKGEFLNRFQRQPDGAWCCKKAIKVDGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIATNPALR
Ga0318541_106065732	3300031545	Soil	MMTKGEFLNRFRRQPDGAWCCTKPIKVEGPSGPFTIRQGVTFNPGALLLGLDLAKELDRMAAEERIARNPA
Ga0310915_101804403	3300031573	Soil	MMTKGEFLNRFQRQPDGAWCCTKPINVEGPSGPFTIRPGVIFNPGALLLGLDLAKELDRMAAEERIATPPPIS
Ga0306917_108903091	3300031719	Soil	MMTKGEFLNRFRRQPDGAWCCTKPIKVEGPSGPFTIRQGVTFNPGALLLGLDLAKELDRMAA
Ga0306918_103965881	3300031744	Soil	MMTKGEFLNRFQRQPDGAWCCTKPINVEGPSGPFTIRQGVTFNPGALLLGLDLAKELDRMAAEERIAKNPALRQS
Ga0306918_112785022	3300031744	Soil	MMTKGEFLNRFRRQPDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIARNPALRQS
Ga0318502_110338211	3300031747	Soil	VMMTKGEFLNRFQRQSDGAWCCTKAIKVDGPSGPFTIRQGVIFNPGALLMGLDLAKELDRMAAEERIAQFGAPTKLI
Ga0318521_109773181	3300031770	Soil	MMTKGEFLNRFQRQSDGAWCCTKAIKVDGPSGPFTIRQGVIFNPGALLMGLDLAKELDRMAAEELTAKFGPRPS
Ga0318547_108014911	3300031781	Soil	MMTKGEFLNRFQRQPDGAWCCTKPINVEGPSGPFTIRPGVIFNPGALLLGLDLAKELDRMAAEERIAKNPALRQS
Ga0318517_105219601	3300031835	Soil	TKGEFLNRFRRQPDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLMGLDLAKELDRMAAEERIAQFGAPTKLI
Ga0306919_101382762	3300031879	Soil	MMTKGEFLNRFRRQPDGAWCCTKPIKVEGPSGPFTIRQGVTFNPGALLLGLDLAKELDRMAAEERIARNPALRQS
Ga0306919_106742931	3300031879	Soil	MMTKGEFLNRFQRQSDGAWCCTKAIKVDGPSGPFTIRQGVIFNPGALLMGLDLAKELDRMAAEERIAQNSVLRQS
Ga0318551_104474202	3300031896	Soil	MMTKGEFLNRFQRQPDGAWCCTKPINVEGPSGPFTIRPGVIFNPGALLLGLDLAKELDRMAAEERIATPPPIC
Ga0306923_104818851	3300031910	Soil	MMTKGEFLNRFHRQPDGAWCCTKPIKVEGPSGPFTIRQGVIFNPGALLLGLDIAKELDRMAVEERVVRNSVLRQS
Ga0306923_114124933	3300031910	Soil	MMTKGEFLNRFQRQSDGAWCCTKAIKVDGPSGPFTIRQGVIFNPGALLMGLDLAKELDRMAAEERIAQFGAPTKLI
Ga0306921_114524242	3300031912	Soil	MMTKGEFLNRFQRQPDGAWCCTKPINVEGPSGPFTIRPGVIFNPGALLLGLDLAKEVDRMAAEERIATPPPIS
Ga0310901_102499891	3300031940	Soil	MMTKGEFLNRFQRQPDGAWCCKKAIKVDGPSGPFTIRQGVIFNPGALLLGLDIAKELDRWAAE
Ga0310912_110944731	3300031941	Soil	MMTKGEFLNRFQRQPDGAWCCTKPINVEGPSGPFTIRQGVTFNPGALLLGLDLAKELDRMAAEERIATPPPIC
Ga0310913_104730631	3300031945	Soil	MTKGEFLNRFQRQPDGAWCCTKPINVEGPSGPFTIRPGVIFNPGALLLGLDLAKELDRMAAEERIATPPPIC
Ga0318504_105614922	3300032063	Soil	MMTKGEFLNRFRRQPDGAWCCTKPIKVEGPSGPFTIRQGVTFNPGALLLGLDLAKELDRMAAEERIARNPALL
Ga0307471_1022589011	3300032180	Hardwood Forest Soil	MMTKGEFLNRFQRQPDGAWYCTKSIKVEGPSGPFTIRQGVIFNPGALLLGLDLAKELDRMAAEERIARNPALPQG
Ga0310914_104956553	3300033289	Soil	MMTKGEFLNRFQCQPDGAWCCTKPINVEGPSGLFTIRPGVIFNPGALLLGLDLAKEVDRMAAEERIATPPPIS

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041898

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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