Metagenome / Metatranscriptome Family F041903

Basic Information
Family ID	F041903
Family Type	Metagenome / Metatranscriptome
Number of Sequences	159
Average Sequence Length	53 residues
Representative Sequence	KRQGKWLSAISVRSDKVPDVLVFLEVLESLAPQVKSTGIDPLARVRM
Number of Associated Samples	129
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	25.00 %
% of genes near scaffold ends (potentially truncated)	1.26 %
% of genes from short scaffolds (< 2000 bps)	0.63 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Unclassified (97.484 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (10.692 % of family members)
Environment Ontology (ENVO)	Unclassified (27.044 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.686 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.67% β-sheet: 0.00% Coil/Unstructured: 53.33%
Feature Viewer

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Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF07837	FTCD_N	10.06
PF02954	HTH_8	3.77
PF05199	GMC_oxred_C	3.14
PF04239	DUF421	3.14
PF07883	Cupin_2	3.14
PF04545	Sigma70_r4	3.14
PF00194	Carb_anhydrase	1.26
PF04389	Peptidase_M28	1.26
PF12704	MacB_PCD	1.26
PF02687	FtsX	1.26
PF07040	DUF1326	1.26
PF02581	TMP-TENI	1.26
PF13418	Kelch_4	0.63
PF03551	PadR	0.63
PF01979	Amidohydro_1	0.63
PF00078	RVT_1	0.63
PF08281	Sigma70_r4_2	0.63
PF07228	SpoIIE	0.63
PF00903	Glyoxalase	0.63
PF04542	Sigma70_r2	0.63
PF02754	CCG	0.63
PF02156	Glyco_hydro_26	0.63
PF02470	MlaD	0.63
PF00486	Trans_reg_C	0.63
PF07978	NIPSNAP	0.63
PF00102	Y_phosphatase	0.63
PF09335	SNARE_assoc	0.63
PF00115	COX1	0.63
PF06271	RDD	0.63
PF13751	DDE_Tnp_1_6	0.63
PF13683	rve_3	0.63
PF08529	NusA_N	0.63
PF02518	HATPase_c	0.63
PF02576	RimP_N	0.63
PF00782	DSPc	0.63
PF07977	FabA	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG3643	Glutamate formiminotransferase	Amino acid transport and metabolism [E]	10.06
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	3.14
COG2323	Uncharacterized membrane protein YcaP, DUF421 family	Function unknown [S]	3.14
COG0352	Thiamine monophosphate synthase	Coenzyme transport and metabolism [H]	1.26
COG3338	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	1.26
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	1.26
COG0247	Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF	Energy production and conversion [C]	0.63
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.63
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.63
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.63
COG0764	3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase	Lipid transport and metabolism [I]	0.63
COG0779	Ribosome maturation factor RimP	Translation, ribosomal structure and biogenesis [J]	0.63
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.63
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.63
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.63
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.63
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.63
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.63
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.63
COG2048	Heterodisulfide reductase, subunit B	Energy production and conversion [C]	0.63
COG2453	Protein-tyrosine phosphatase	Signal transduction mechanisms [T]	0.63
COG4124	Beta-mannanase	Carbohydrate transport and metabolism [G]	0.63
COG4706	Predicted 3-hydroxylacyl-ACP dehydratase, HotDog domain	Lipid transport and metabolism [I]	0.63
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.63
COG5599	Protein tyrosine phosphatase	Signal transduction mechanisms [T]	0.63

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.48 %
All Organisms	root	All Organisms	2.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.48 %
cellular organisms	root	All Organisms → cellular organisms	2.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.48 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.48 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.48 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.63 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005434\|Ga0070709_10002788	All Organisms → cellular organisms → Bacteria → Acidobacteria	9444	Open in IMG/M
3300005764\|Ga0066903_101266509	All Organisms → cellular organisms → Bacteria → Acidobacteria	1375	Open in IMG/M
3300031720\|Ga0307469_10000795	All Organisms → cellular organisms → Bacteria → Acidobacteria	11523	Open in IMG/M
3300032955\|Ga0335076_10028495	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5607	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.57%
Host-Associated	Host-Associated	9.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.05%
Plants	Host-Associated → Plants	9.43%
Aquatic	Environmental → Aquatic	2.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.89%
Freshwater	Environmental → Aquatic → Freshwater	1.26%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.63%
Sediment	Environmental → Aquatic → Sediment	0.63%
Peat	Environmental → Terrestrial → Peat	0.63%
Roots	Host-Associated → Plants → Roots	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.55%
Loam	Environmental → Terrestrial → Soil → Loam	15.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.26%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.14%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.52%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.26%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.63%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.63%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.06%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	9.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.18%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.14%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.14%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.89%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.26%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.26%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.26%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.63%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.63%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.63%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.63%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1012194892	3300000364	Soil	LVRSNLQIKQQGTWLNAISVRSDKVPDVLVFLESLEFLAPQMKSTGIDPLARVRM*
JGI1027J11758_111349651	3300000789	Soil	ITKAELAGSNLQIKRQGKWLSAVSVRSNKVPDVLVFLDVLESLAPQIKSMGVDPLARVRM
JGI1027J11758_122731312	3300000789	Soil	AELVRSNLQIKQQGTWLNAISVRSDKVPDVLVFLESLEFLAPQMKSTGIDPLARVRM*
F14TB_1055665232	3300001431	Soil	AVNVRSDKVPNVLVFLEVLESLAPQVKATGIDPMARVRL*
JGIcombinedJ51221_101274763	3300003505	Forest Soil	RSAVSVRADKVPDVLVFLEALESLAPQIKSTGIDPLARVRM*
Ga0063454_1006877561	3300004081	Soil	GKWLSAVNVKSSKVPDVLVFLDVLESLAPQIKATGVDPLARVRM*
Ga0062593_1030636822	3300004114	Soil	RRGKWLSAVSVRSDKIPNVLVFLEALESLAPQIKSTGIDPLGRVRF*
Ga0062386_1004153032	3300004152	Bog Forest Soil	MMAAFSARSDKVPNILVFLEVLDSLAPQLRGGQIDPLARVRL*
Ga0062595_1001900711	3300004479	Soil	QIKQSGKWLAAINVRSDKLPNVLVFLEVLESVAPQVKSSGVDPLARVRL*
Ga0066395_110394391	3300004633	Tropical Forest Soil	NLQIKRSGKWLSAVNVRSSKVPDVLVFLEVLESLAPQIKSSGVDPLARVRV*
Ga0062594_1025126381	3300005093	Soil	AEIVGSNLQIKRRGKWLSAVSVRSDKIPNVLVFLEALESLAPQIKSTGIDPLGRVRF*
Ga0066815_101140732	3300005164	Soil	LVVKREGKWMAAISVRSDKVPNVLVFLEVLESLAPQVKSTGIDPLARVRM*
Ga0066672_103130371	3300005167	Soil	AAINVRSDKVPNVLVFLEVLESVAPQVKSSGVDPLARVRL*
Ga0066677_100721771	3300005171	Soil	KWLSAISVRSDKVPDVLAFFEVLESLAPQVKSTGIDPLARVRM*
Ga0066680_100452191	3300005174	Soil	KWLAVISVRSDKVPNVLVFLEVLESLAPQVKSTGVDPLARVRL*
Ga0066684_104661041	3300005179	Soil	VGSNLQIKRQRKWLSAVNVKSSKVPDVLVFLEVLESLAPQIKPTGVDPLARVRM*
Ga0066684_104788073	3300005179	Soil	LFVFIPVSEITKAELMRSNLQVKRQGKWLSAISVRSDKVPNVLVFLEVLESLAPQVKSTGIDPLARLRM*
Ga0065715_107546622	3300005293	Miscanthus Rhizosphere	RQGKWRSAISVRSDKVPDVLVFLEVLESLVPHVKSTGIDPLARVRM*
Ga0070690_1009108851	3300005330	Switchgrass Rhizosphere	RSAVSVRSDKVPDVLVFLDVLEGLAPQIKSTGIDPLARVRM*
Ga0068868_1009413002	3300005338	Miscanthus Rhizosphere	VSEIEKAEIVGSNLQIKRRGKWLSAVSVRSDKIPNVLVFLEALESLAPQIKSTGIDPLGRVRF*
Ga0070671_1015989882	3300005355	Switchgrass Rhizosphere	TIPVSEIEKAEIVGSNLQIKRRGKWLSAVSVRSDKIPNVLVFLEALESLAPQIKSTGIDPLGRVRF*
Ga0070709_1000278810	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	RTGKWLSAVSVRSNKVPDVLAFLDVLESLAPQIKSMGVDPLARVRM*
Ga0070714_1008890752	3300005435	Agricultural Soil	QIKREGKWLAVISVRSDKVPNVLVFLEVLESLAPQVKSTGVDPLARVRL*
Ga0070710_102941263	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VGEITKAELAGASLQIKRQGKWLSAVSVRSNKVPDVLVFLEVLESLAPQIKSAVVDPLARVRL*
Ga0070711_1000252535	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	QIKRTGKWLSAVSVRSNKVPDVLAFLDVLESLAPQIKSMGVDPLARVRM*
Ga0070711_1003636972	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	AVISVRSDKVPNVLAFLEVLESLAPQVKSTGVDPLARVRL*
Ga0070708_1003698191	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LSEITKAELVRGNLQIKRQGKWLTAISVRSDKVPDVLAFFEVLESLAPQVKSTGIDPLARVRM*
Ga0070706_1004715311	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	EITKAELVRSNLQIKRHGKWRSAISVRSDKVPDVLVFLEVLESLAPQIKSTGIDPLARVRM*
Ga0070699_1018062272	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	KAELVRSNLQIKRHGKWRSAISVRSDKVPDVLVFLEVLESLVPHIKSTGIDPLARVRM*
Ga0070679_1006923761	3300005530	Corn Rhizosphere	QSGKWLAAINVRSDKLPNVLVFLEVLESVAPQVKSSGVDPLARVRL*
Ga0070697_1003643172	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	RQGKWLTAISVRSDKVPDVLAFFEVLESLAPQVKSTGIDPLARVRM*
Ga0070697_1004564662	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	NSIPLSEITKAELVRGNLQIKRQGKWLTAISVRSDKVPDVLAFFEVLESLAPQVKSTGIDPLARVRM*
Ga0070732_109003551	3300005542	Surface Soil	EILRSNLQIKREGKWLAVISVRSDKVPNVLVFLEVLESLAPQVKSTGVDPLARVRF*
Ga0070695_1006623271	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	GKWRSAVSVRSDKVPDVLVFLDVLEGLAPQIKSTGIDPLARVRM*
Ga0066702_103807482	3300005575	Soil	NAELVGTNLRVKRQGKWLSAISVRSDKVPNVLVFLEVLESLAPQVKSTGIDPLARVRV*
Ga0066691_101688531	3300005586	Soil	KGTSIPVTDITKAELVGSNLQIKRQGKWLSAVNVKSSKVPDVLVFLEVLESLAPQIKPTGVDPLARVRM*
Ga0066903_1012665091	3300005764	Tropical Forest Soil	IPVSEITKAELLRTNLIVKRAGKWLAAISVRSDKIPNALVFLEALESLAPQVKATGVDPLARVRM*
Ga0075029_1001594651	3300006052	Watersheds	GKWLSAVSVRSKKVPDVLVFLEVLESLAPQIKPAGVDPLARVRM*
Ga0070712_1016209851	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GSNLQIKRRGKWLSAVSVRSDKIPNVLVFLEALESLAPQIKSTGIDPLGRVRF*
Ga0066658_103761441	3300006794	Soil	SVRSDKIPNVLVFLEALESLAPQIKCTGIDPFGRVRF*
Ga0066659_102823961	3300006797	Soil	LVGTNLRVKRQGKWLSVISVRSDKVPNVLVFLEVLESLAPQVKSTGIDPLARVRV*
Ga0066659_107069301	3300006797	Soil	EITKAELVRGNLQIKRQGKWLSAISVRSDKVPDVLAFFEVLESLAPQVKSTGIDPLARVRM*
Ga0066659_114204381	3300006797	Soil	VSEISKAELAGIYLKVKRQGKWLAAINVKSDKVPNVLVFLEVLESVAPQVKSTGIDPLARVRL*
Ga0066660_104389131	3300006800	Soil	ISVRSDKVPNVLVFLEVLESVAPQVKSTGIDPLARVRV*
Ga0079220_100114583	3300006806	Agricultural Soil	VTPSPTVPLSGEKAEIVGSNLQVKRRGKWLSAVSVRSDKIPNVLVFLEALESLAPQVKSTGIDPLGRVRF*
Ga0079220_102875141	3300006806	Agricultural Soil	KWLSAVNVKSNKVPDVLVFLEVLESLAPQIKSTGVDPLAHVRV*
Ga0097620_1012077171	3300006931	Switchgrass Rhizosphere	NLQIKRRGKWLSAVSVRSDKIPNVLVFLEALESLAPQIKSTGIDPLGRVRF*
Ga0099793_103888471	3300007258	Vadose Zone Soil	TKAELAGSNLQVKREGKWLAAISVRSNKVPNVLVFLEVLESLAPQVKSTGIDPLARVRI*
Ga0099829_108533691	3300009038	Vadose Zone Soil	SEITKAELVRSNLQIKRQGKWLSAISVRSDKVPDVLVFLEVLESLAPQVKSTGIDPLARVRM*
Ga0099792_107791311	3300009143	Vadose Zone Soil	SNLQISRRGKWLCAISVRSDKVPDVLVFLEVLESLAPQVKSTGIDPLARVRM*
Ga0099792_108583401	3300009143	Vadose Zone Soil	SVRSDKVPDVLVFLEVLESLAPQVKSTGIDPLARVRM*
Ga0126380_100450504	3300010043	Tropical Forest Soil	LRSNLQIKRQGKWLAAVNVRSDKVPNVLVFLEVLESLAPQVKATGIDPMARVRL*
Ga0126380_103761381	3300010043	Tropical Forest Soil	KWMSAVSVRSDKVPEVLVFLECLEFLGPQVKSAGMHPLARVRM*
Ga0126384_111317831	3300010046	Tropical Forest Soil	IKRTGKWLSAISVRSDKIPDVLVFLEVLESLAPQVKQSGIDPLARVRM*
Ga0126382_116075112	3300010047	Tropical Forest Soil	LAGTNLQIKRSGKWLSAVNVKSNRVPDVLVFLEVLESIAPKIKSTGVDPLARVRV*
Ga0126373_113317261	3300010048	Tropical Forest Soil	VRTNLMVKREGKWIAAISVRSDKVPNVLVFLEVLESLAPQVKSTGIDPLARVRM*
Ga0126373_123132331	3300010048	Tropical Forest Soil	TNLVVKREGKWLAAISVRSNKVPNVLVFLEVLESLAPQVKSTGIDPLARVRM*
Ga0134064_103653201	3300010325	Grasslands Soil	VRSDKVPDVLVFLETLESVAPQIKSTGIDPLARVRM*
Ga0126372_112656201	3300010360	Tropical Forest Soil	TWKNQSIPVTQITKAELLRTNLMVKREGKWLAAISVRSDKIPNALVFLEVLESLAPQVKSTGIDPLARVRM*
Ga0126372_126441832	3300010360	Tropical Forest Soil	NSIPVSEITKAELAGTNLQIKRSGKWLSAVNVKSNRVPDVLVFLEVLESIAPQIKSTGVDPLARVRV*
Ga0126378_132081231	3300010361	Tropical Forest Soil	GKWLSAISVRSIKVPDVLVFLEVLESLAPQIKSTGVDPLARVRM*
Ga0126377_104896081	3300010362	Tropical Forest Soil	ELAGPNLQIKRTGKWMSAVSVRSDKVPDVLVFLEVLESLAPQVKASGVDPLARVRI*
Ga0134128_103445572	3300010373	Terrestrial Soil	WLSAVSVRSDKIPNVLVFLEALESLAPQVKSTGIDPLGRVRF*
Ga0126381_1044948352	3300010376	Tropical Forest Soil	MWKGTSIPVMEITKAELAGSHLQIKRTGKWLSAVSVRSNKVPDVLAFLEVLESLAPQIKSMGVDPLARVRM*
Ga0126383_114204741	3300010398	Tropical Forest Soil	MVKREGKWLAAISVRSDKIPNALVFLEVLESLAPQVKSTGIDPLARVRM*
Ga0126383_117690861	3300010398	Tropical Forest Soil	NSIPVTEISKAELAGSNLQIKRQGKWLSAVSVRSNKVPDVLVFLEVLESLAPQIKSMGVDPLARVRM*
Ga0134122_122685921	3300010400	Terrestrial Soil	IKRRGKWLSAVSVRSDKITNVLVFLEALESLAPQIKSTGIDPLGRVRF*
Ga0137776_18352341	3300010937	Sediment	EITKAELAGSNLQIKRQGKWLSAVSVRSNKVPDVLVFLDVLESLAPQIKLMGVDPLARVRM*
Ga0137388_110334191	3300012189	Vadose Zone Soil	NSIPVSEITKADLVGSNLQIKRQGKWLNAISVRSDKVPNVLVFLEVLESLAPQVKSTGIDPLARVRATVK*
Ga0137382_109450831	3300012200	Vadose Zone Soil	AELVRSNLQIKRQRKWRHAISVRSDKVPDVLVFLETLESLAPQIRATGIDPLARVRM*
Ga0137376_100607781	3300012208	Vadose Zone Soil	QRKWLSAVNVKSSKVPDVLVFLEVLESLAPQIKPTGVDPLARVRM*
Ga0137378_1000249616	3300012210	Vadose Zone Soil	RQGKWLTAISVRSDKVPDVLAFFEVLESLAPQVKSTGIDPLTRVRM*
Ga0137377_100134161	3300012211	Vadose Zone Soil	RNAISVRSDKVPDVLVFLETLESVAPQIKSTGIDPLARVRM*
Ga0137375_103194643	3300012360	Vadose Zone Soil	LQIKRQGKWRNAISVRSDKVPDVLVFLETLESLAPQIKAKGIDPLARVRM*
Ga0137404_108665651	3300012929	Vadose Zone Soil	AISVRSDKVPDVLAFFEVLESVAPQVKATGIDPLARVRM*
Ga0137407_111672181	3300012930	Vadose Zone Soil	PVSEITKAELVRSNLQIKRQGKWRNAMSVRSDKVPDVLVFLETLESVAPQIKSTGIDPLARVRM*
Ga0126375_115403062	3300012948	Tropical Forest Soil	RNGKWMSAVSVRSDKVPDVLVFLECLESLGPQVKSAGMNPLARVRM*
Ga0164298_109383862	3300012955	Soil	KWLSAVSVRSDKIPNVLVFLEALESLAPQIKSTGIDPLGRVRF*
Ga0164299_102662851	3300012958	Soil	TWKNQSIPVTQITKAELLRTNLVVKREGKWMAAISVRSDKVPNVLVFLEVLESLAPQVKSTGIDPLARVRM*
Ga0126369_111614631	3300012971	Tropical Forest Soil	QGKWLSAVSVRSNKVPDVLVFLEVLESLAPQIKSMGVDPLARVRM*
Ga0126369_115475861	3300012971	Tropical Forest Soil	SVGSDKVPNVLVFLEVLESLAPQVKSTGVDPMVRVRL*
Ga0134110_102521831	3300012975	Grasslands Soil	VKSDKVPNVLVFLEVLESVAPQVKSTGIDPLARVRL*
Ga0134110_105144281	3300012975	Grasslands Soil	IYLKVKRQGKWLAVISVKSDKVPNVLVFLEVLESVAPQIKSTGIDPLARVRV*
Ga0164304_100614831	3300012986	Soil	REGKWMAAISVRSDKVPNVLVFLEVLESLAPQVKSTGIDPLARVRM*
Ga0164304_107652781	3300012986	Soil	AELVRSNLQIKRNGKWRSAVSVRSDKVPDVLVFLDVLEGLAPQIKSTGIDPLARVRM*
Ga0163162_104415731	3300013306	Switchgrass Rhizosphere	SNLQIKRRGKWLSAVSVRSDKIPNVLVFLEALESLAPQIKSTGIDPLGRVRF*
Ga0163162_107293601	3300013306	Switchgrass Rhizosphere	KTIPVSQITRAEIAGTNLRVKQQGKWLAAISVRSDKVPNVLVFLDVLESLAPQIKSTGIDPLARVRM*
Ga0134075_102984741	3300014154	Grasslands Soil	INVKSDKVPNVLVFLEVLESVAPQVKSTGIDPLARVRL*
Ga0163163_108102781	3300014325	Switchgrass Rhizosphere	SAVNVRSDKVPDVLVFLEVLESVAPQVKSSGIDPLARVRM*
Ga0182019_110483391	3300014498	Fen	IKRQGKWISAVNVKSSKVPDVLVFLEVLESLAPQIKSTGVDPLARVRM*
Ga0134073_104050541	3300015356	Grasslands Soil	AELVRTNLQIKRAGKWLSAVNVRSDKIPDVLVFLEALESIAPQVKPGGIDSLARVRM*
Ga0132258_101995861	3300015371	Arabidopsis Rhizosphere	TKAELLRTNLVVKREGKWMAAISVRSDKVPNVLVFLEVLESLAPQVKSTGIDPLARVRM*
Ga0132258_103386311	3300015371	Arabidopsis Rhizosphere	TKAELLRTNLVVKREGKWMAAISVRSDKVPNVLVFLEVLESFAPQVKSTGIDPLARVRM*
Ga0132258_123891811	3300015371	Arabidopsis Rhizosphere	VRSDKVPNVLVFLEVLESLAPQVKATGMDPMARVRL*
Ga0132257_1026273911	3300015373	Arabidopsis Rhizosphere	SNLQIKRNGKWRSAVSVRSDKVPDVLVFLDVLEGLAPQIKSTGIDPLARVRM*
Ga0132255_1053276692	3300015374	Arabidopsis Rhizosphere	GKWRSAISVRSDKVPDVLVFLEVLESLVPHIKSTGIDPLARVRM*
Ga0182036_106743901	3300016270	Soil	RSNLQIKREGKWRPAISLRSDKVPNVLVFLEVLESLAPQVKSSGIDPLARVRL
Ga0182036_115354572	3300016270	Soil	AELAGSNLQIKRQGKWLAAVSVRSSKVPDVLVFLEVLESLAPQLKAIGVDPLARVRV
Ga0182039_107251272	3300016422	Soil	KRRGKWLSAVSVRSNKVPDVLVFLEVLESLAPQIKSAGVDPFARVRM
Ga0187766_109474521	3300018058	Tropical Peatland	QIKRTGKWLSAVHVRSNKVPDVLVLLEVLESLAPQIKSMGIDPLARVRM
Ga0066662_127949791	3300018468	Grasslands Soil	SIPLSELTKAELVRGNLQLKRQGKWLTAISVRSDKVPDVLAFFEVLESLAPQVKSTGIDPLTRVRM
Ga0193728_10231021	3300019890	Soil	LVRSNLQINRRGKWLSAISVRSDKVPDVLVFLEVLESLAPQVKSTGVDPLARVRM
Ga0193718_10298292	3300019999	Soil	LVRTNLQIKQQGKWRNAVSVRSDKVPDVLVFLETLESLAPQIKATGIDPLARVRM
Ga0193730_11673251	3300020002	Soil	AISVRSDKVPDVLAFFEVLESLAPQVKSTGIDPLARVRM
Ga0193735_10861481	3300020006	Soil	KAELVRGNLQIKRQGKWLTAISVRSDKVPDVLAFCEVLESLAPQVKSTGIDPLARVRM
Ga0210399_100818621	3300020581	Soil	ITKAELLRTNLMVKRQGKWLAAISVRSDKVPNVLVFLEVLESLAPQVKSTGVDPLARVRM
Ga0210399_103625062	3300020581	Soil	KWLSAISVRSDKVPDVLVFLEVLESLAPQVRSTGIDPLARVRM
Ga0210406_104675671	3300021168	Soil	KRQGKWLSAISVRSDKVPDVLVFLEVLESLAPQVKSTGIDPLARVRM
Ga0126371_137357091	3300021560	Tropical Forest Soil	SVRSNKVPDVLVFLDVLESLAPQIKSSGIDPLARVRM
Ga0242662_103180312	3300022533	Soil	QAGLVRSNLQIKRQGKWLSAISVRSDKVPDVLVFLEVLESLAPQVKSTGIDPLERVRM
Ga0207692_109209152	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VGEITKAELAGASLQIKRQGKWLSAVSVRSNKVPDVLVFLEVLESLAPQIKSAVVDPLARVRL
Ga0207699_104435791	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LQIKRQGKWLSAVSVRSNKVPDVLVFLEVLESLAPQIKSAVVDPLARVRL
Ga0207695_114639862	3300025913	Corn Rhizosphere	ELVRSNLQIKQSGKWLAAINVRSDKVPNVLVFLEALETLAPQVKSSGVDPLARVRL
Ga0207652_118576891	3300025921	Corn Rhizosphere	VSEIEKAEIVGSNLQIKRRGKWLSAVSVRSDKIPNVLVFLEALESLAPQIKSTGIDPLGRVRF
Ga0207701_114517801	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	SVRSDKIPNVLVFLEALESLAPQIKSTGIDPLGRVRF
Ga0207706_101039982	3300025933	Corn Rhizosphere	VGSNLQIKRRGKWLSAVSVRSDKIPNVLVFLEALESLAPQIKSTGIDPLGRVRF
Ga0207667_102100553	3300025949	Corn Rhizosphere	KRRGKWLSAVSVRSDKIPNVLVFLEALESLAPQIKSTGIDPLGRVRF
Ga0209239_13566272	3300026310	Grasslands Soil	IPVSEISKAELAGIYLKVKRQGKWLAAINVKSDKVPNVLVFLEVLESVAPQVKSTGIDPLARVRL
Ga0209158_10929202	3300026333	Soil	GKWLSAVNVKSSKVPDVLVFLEVLESLAPQIKPTGVDPLARVRM
Ga0257180_10627861	3300026354	Soil	KAELVRSNLQIKRQGKWRSAISVRSDKVPDVLVFLEVLESLAPQIKSTGIDPLARVRM
Ga0257168_10956341	3300026514	Soil	SAISVRSDKVPDVLVFLEVLESLAPQVKSTGIDPLARVRM
Ga0209805_10509383	3300026542	Soil	WKKNSIPLSELTKAELVRGNLQLKRQGKWLTAISVRSDKVPDVLAFFEVLESLAPQVKSTGIDPLTRVRM
Ga0179587_104719411	3300026557	Vadose Zone Soil	AISVRSQKVPNVLVFLEVLESLAPQLKSTGIDPLARVRV
Ga0209418_10827132	3300027371	Forest Soil	GKWLAAISVRSDKVPNALVFLEVLESLAPQVKSTGIDPLARVRM
Ga0209811_104343682	3300027821	Surface Soil	RTGKWLSAVSVRSNKVPDVLAFLDVLESLAPQIKSMGVDPLARVRM
Ga0209039_100042118	3300027825	Bog Forest Soil	VGSKLRVKRKGKMMAAFSARSDKVPNILVFLEVLDSLAPQLRGGQIDPLARVRL
Ga0209580_101047271	3300027842	Surface Soil	QITKAEILRSNLQIKREGKWLAVISVRSDKVPNVLVFLEVLESLAPQVKSTGVDPLARVR
Ga0209465_106715301	3300027874	Tropical Forest Soil	RSDKIPNVLVFLEVLESLAPQVKATGVDPLARVRM
Ga0137415_114808451	3300028536	Vadose Zone Soil	PVSEITKAELVRSNLQIKRRGKWLSAISVRSDKVPDVLVFLEVLESLAPQVKSTGIDPLARVRM
Ga0307482_12605181	3300030730	Hardwood Forest Soil	PVSEITQAGLVRSNLQVKRQGKWLSAISVRSDKVPDVLVFLELLESLAPQVKSTGIDPMARVRM
Ga0307483_10124591	3300031590	Hardwood Forest Soil	PISQITKAELVRSNLQIKQQGKWLNAVSVRSDKVPDVLVFLEALESLAPQIKSTGIDPLARVRM
Ga0310813_115346511	3300031716	Soil	NSIPLSQITKAELVRSNLQIKQSGKWLAAINVRSDKVPNVLVFLEALETLAPQVKSSGVDPLARVRL
Ga0307474_116357781	3300031718	Hardwood Forest Soil	RSNLQIKRQGKWLSSISVRSDKVPDVLVFLETLESLAPQIKSTGIDPLARVRM
Ga0307469_100007957	3300031720	Hardwood Forest Soil	LAEANKRSNLQIQRQGKWLAAISVRSDKVADVLVFLETLESLAPQMKSTGIDPLARVRM
Ga0307469_105065791	3300031720	Hardwood Forest Soil	QGKWMSAISVRSDKVPDVLVLLEVLESLAPQVKATGVDPLAHVRM
Ga0307469_109842933	3300031720	Hardwood Forest Soil	SVPVLEITKAELVRSNLQIKRQGKWRSAISVRSDKVPDVLVFLEVLESLVPHVKSTGIDPLARVRM
Ga0307469_113082742	3300031720	Hardwood Forest Soil	ELVGANLQVKREGKWLAAISVRSDKVPNVLVFLEVLESLAPQLTSTGIDPLARVRL
Ga0307469_122175512	3300031720	Hardwood Forest Soil	KWRSAISIRSDKVPDVLVFLEVLESLAPQIKSTGINPLARVRM
Ga0307473_106459342	3300031820	Hardwood Forest Soil	EILRSNLQLRREGKWLAVISVRSDKVPNVLVFLEVLESLAPQVKSTGVDPLARVRL
Ga0307473_115229462	3300031820	Hardwood Forest Soil	NNSIPLSEITKAELVRGNLQIKRKGKWLTAISVRSDKVPDVLAFFEVLESLAPQVKSTGIDPLARVRM
Ga0307478_112264592	3300031823	Hardwood Forest Soil	LQIKRHGKWRSAISVRSDKVPDVLVFLEVLESLAPQTKSTGIDPLARVRM
Ga0310917_107031771	3300031833	Soil	ISKAELAGSNLQIKRQGKWLAAVSVRSSKVPDVLVFLEVLESLAPQLKAIGVDPLARVRV
Ga0306921_125939302	3300031912	Soil	ANLQIKRQGKWLSAVSVRSNKVPDVLVLLDVLESLAPQIKSSGIDPLARVRM
Ga0308174_105259052	3300031939	Soil	RSDKVPNVLVFLEVLETVAPQVKSTGVDPLARVRL
Ga0308174_119174581	3300031939	Soil	VRSNLQIKQSGKWLAAINVRSDKLPNVLVFLEVLETLAPQVKSSGVDPLARVRL
Ga0310912_112503461	3300031941	Soil	VLWKGNSIPVTEISKAELAGSNLQIKRQGKWLAAVSVRSSKVPDVLVFLEVLESLAPQLKAIGVDPLARVRV
Ga0310916_114333971	3300031942	Soil	KGNTIPVTEITSAELAGSNLQIKRQGKWLSAVSVRSNKVPDVLAFLEVLESLAPQIKSMGVDPLARVRM
Ga0310916_115158902	3300031942	Soil	SNLQIKRQGKWLAAVSVRSSKVPDVLVFLEVLESLAPQLKAIGVDPLARVRV
Ga0306922_105079301	3300032001	Soil	KAELAGSNLQIKRQGKWLAAVSVRSSKVPDVLVFLEVLESLAPQLKAIGVDPLARVRV
Ga0306922_114618511	3300032001	Soil	NSIPLSQITKAELVRSNLQIKREGKWLAAISVRSDKVPNVLVFLEVLESLAPQVKSSGIDPLARVRL
Ga0308173_104971001	3300032074	Soil	KNSIPVSQITKAELVRSNLQIKQSGKWLAAVNVRSDKVPNVLVFLEVLETVAPQVKSTGVDPLARVRL
Ga0307471_1004252423	3300032180	Hardwood Forest Soil	LVRSNLQIKRQGKWRSAISVRSDKVPDVLVFLEVLESLVPHVKSTGIDPLARVRM
Ga0307471_1007413692	3300032180	Hardwood Forest Soil	NVKSSKVPDVLVFLEVLESLAPQIKSTGVDPLARVRM
Ga0307471_1012519251	3300032180	Hardwood Forest Soil	AITKAELAGSNLQIKRQGKWLSAVNVKSSKVPDVLVFLEVLDSLAPQIKSTGVDPLARVR
Ga0307472_1022388631	3300032205	Hardwood Forest Soil	LLRTNLVVKREGKWMAAISVRSDKVPNVLVFLEVLESLAPQVKLTGIDPLARVRM
Ga0335081_102501754	3300032892	Soil	GNWMSAVNVRSNKVPDVLVFLEVLESLAPQIKATGVDPLARVRM
Ga0335071_119420811	3300032897	Soil	AVSVRSNKVPNVLAFLEVLESLAPQIKSMGLDPLARVRM
Ga0335076_100284953	3300032955	Soil	LAGANLQIKRQGKWLSAVSVRSNKVPDVLVFLEVLESLAPQIKATGVDPLARVRM
Ga0326727_101310836	3300033405	Peat Soil	SNLQVKRSGKWLSAINVRSDKVPDVLVFLEALESLAPQVKSRGIDPLARVRM

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041903

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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