Metagenome Family F041923

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041923
Family Type	Metagenome
Number of Sequences	159
Average Sequence Length	40 residues
Representative Sequence	VPYDKINNVVAPDGGAHVCAPRQVGPNKGVLFCVILPSEG
Number of Associated Samples	112
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.52 %
% of genes near scaffold ends (potentially truncated)	97.48 %
% of genes from short scaffolds (< 2000 bps)	89.94 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.340 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.384 % of family members)
Environment Ontology (ENVO)	Unclassified (30.189 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.491 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF14534	DUF4440	8.81
PF04392	ABC_sub_bind	6.29
PF03401	TctC	5.66
PF12680	SnoaL_2	3.14
PF07690	MFS_1	3.14
PF00756	Esterase	1.26
PF00294	PfkB	1.26
PF00903	Glyoxalase	1.26
PF07045	DUF1330	1.26
PF13683	rve_3	1.26
PF01425	Amidase	1.26
PF01844	HNH	1.26
PF00994	MoCF_biosynth	0.63
PF09278	MerR-DNA-bind	0.63
PF13472	Lipase_GDSL_2	0.63
PF08770	SoxZ	0.63
PF06707	DUF1194	0.63
PF00027	cNMP_binding	0.63
PF13501	SoxY	0.63
PF02371	Transposase_20	0.63
PF00589	Phage_integrase	0.63
PF00239	Resolvase	0.63
PF10282	Lactonase	0.63
PF00529	CusB_dom_1	0.63
PF13964	Kelch_6	0.63
PF13531	SBP_bac_11	0.63
PF01548	DEDD_Tnp_IS110	0.63
PF13669	Glyoxalase_4	0.63
PF01068	DNA_ligase_A_M	0.63
PF11684	DUF3280	0.63
PF00126	HTH_1	0.63
PF00536	SAM_1	0.63
PF13495	Phage_int_SAM_4	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	6.29
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	5.66
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.26
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	1.26
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	1.26
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.63
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.63
COG0789	DNA-binding transcriptional regulator, MerR family	Transcription [K]	0.63
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.63
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.34 %
Unclassified	root	N/A	5.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.34 %
Unclassified	root	N/A	5.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.34 %
Unclassified	root	N/A	5.66 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.31 %
Unclassified	root	N/A	5.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.26 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	41.51 %
Unclassified	root	N/A	5.66 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.52 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.52 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.63 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.63 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20.13 %
Unclassified	root	N/A	5.66 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.52 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.63 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.63 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	15.09 %
Unclassified	root	N/A	5.66 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.52 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.63 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.63 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	15.09 %
Unclassified	root	N/A	5.66 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.52 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.63 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	0.63 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.66 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.52 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.26 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.63 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.63 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.63 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10091952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	753	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1031374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	980	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10080513	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10101138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	608	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10107070	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300000955\|JGI1027J12803_101927088	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300000955\|JGI1027J12803_103275024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	669	Open in IMG/M
3300000955\|JGI1027J12803_106010444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	732	Open in IMG/M
3300000956\|JGI10216J12902_103042646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	518	Open in IMG/M
3300001431\|F14TB_100234699	Not Available	1321	Open in IMG/M
3300005332\|Ga0066388_100147715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2926	Open in IMG/M
3300005332\|Ga0066388_104430493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	715	Open in IMG/M
3300005436\|Ga0070713_100068225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2996	Open in IMG/M
3300005437\|Ga0070710_11359269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	530	Open in IMG/M
3300005446\|Ga0066686_11032227	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300005447\|Ga0066689_10074307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1891	Open in IMG/M
3300005468\|Ga0070707_100224985	All Organisms → cellular organisms → Bacteria → Proteobacteria	1827	Open in IMG/M
3300005536\|Ga0070697_100125986	All Organisms → cellular organisms → Bacteria	2145	Open in IMG/M
3300005559\|Ga0066700_11027019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	541	Open in IMG/M
3300005713\|Ga0066905_100014838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3909	Open in IMG/M
3300005713\|Ga0066905_100092350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2028	Open in IMG/M
3300005713\|Ga0066905_100755604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300005713\|Ga0066905_101142673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	693	Open in IMG/M
3300005713\|Ga0066905_101603665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	595	Open in IMG/M
3300005713\|Ga0066905_102314473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	502	Open in IMG/M
3300005764\|Ga0066903_100415251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2224	Open in IMG/M
3300005764\|Ga0066903_100518436	All Organisms → cellular organisms → Bacteria → Proteobacteria	2028	Open in IMG/M
3300005764\|Ga0066903_100892369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1607	Open in IMG/M
3300005764\|Ga0066903_101921359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1134	Open in IMG/M
3300005764\|Ga0066903_102412738	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300005764\|Ga0066903_103435289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	854	Open in IMG/M
3300005764\|Ga0066903_105537185	Not Available	665	Open in IMG/M
3300005764\|Ga0066903_106249232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622	Open in IMG/M
3300006048\|Ga0075363_100910613	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300006163\|Ga0070715_10004940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4418	Open in IMG/M
3300006175\|Ga0070712_100324144	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300006175\|Ga0070712_101170660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	668	Open in IMG/M
3300006797\|Ga0066659_10566585	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300006804\|Ga0079221_10358631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	884	Open in IMG/M
3300006845\|Ga0075421_100764005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1116	Open in IMG/M
3300006846\|Ga0075430_101628047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	530	Open in IMG/M
3300006852\|Ga0075433_11438708	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300006854\|Ga0075425_100148963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2680	Open in IMG/M
3300006854\|Ga0075425_102439088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300006904\|Ga0075424_101397169	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300009156\|Ga0111538_10575975	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300009162\|Ga0075423_13142938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	506	Open in IMG/M
3300009792\|Ga0126374_10524956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	859	Open in IMG/M
3300009792\|Ga0126374_11608962	Not Available	537	Open in IMG/M
3300010043\|Ga0126380_11631566	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300010043\|Ga0126380_11815562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	552	Open in IMG/M
3300010047\|Ga0126382_10231029	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300010047\|Ga0126382_12374788	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300010048\|Ga0126373_13048630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	522	Open in IMG/M
3300010159\|Ga0099796_10218655	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300010361\|Ga0126378_11564299	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300010362\|Ga0126377_12861857	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300010366\|Ga0126379_11272062	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300010366\|Ga0126379_11883581	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300010366\|Ga0126379_13316502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300010376\|Ga0126381_101505700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	972	Open in IMG/M
3300010376\|Ga0126381_101723031	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300010379\|Ga0136449_104364965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	522	Open in IMG/M
3300010379\|Ga0136449_104656469	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300010398\|Ga0126383_10983201	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300010398\|Ga0126383_11322981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	811	Open in IMG/M
3300010398\|Ga0126383_12596440	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300011271\|Ga0137393_10246957	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300012201\|Ga0137365_11034679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	594	Open in IMG/M
3300012211\|Ga0137377_11164589	Not Available	701	Open in IMG/M
3300012351\|Ga0137386_11240003	Not Available	520	Open in IMG/M
3300012356\|Ga0137371_10345568	Not Available	1156	Open in IMG/M
3300012359\|Ga0137385_11505411	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300012582\|Ga0137358_10105755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1907	Open in IMG/M
3300012930\|Ga0137407_11751844	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300012955\|Ga0164298_11705760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300012957\|Ga0164303_11370228	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300012971\|Ga0126369_10684443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1102	Open in IMG/M
3300012971\|Ga0126369_10719464	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300012971\|Ga0126369_12428522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	610	Open in IMG/M
3300012971\|Ga0126369_13342493	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300015241\|Ga0137418_11219777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	528	Open in IMG/M
3300016270\|Ga0182036_11429445	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300016294\|Ga0182041_10035739	All Organisms → cellular organisms → Bacteria → Proteobacteria	3235	Open in IMG/M
3300016294\|Ga0182041_11820967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	565	Open in IMG/M
3300016319\|Ga0182033_10884287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	790	Open in IMG/M
3300016319\|Ga0182033_11388246	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300016341\|Ga0182035_10240155	All Organisms → cellular organisms → Bacteria	1457	Open in IMG/M
3300016341\|Ga0182035_11466476	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300016357\|Ga0182032_10127382	All Organisms → cellular organisms → Bacteria	1848	Open in IMG/M
3300016387\|Ga0182040_10460500	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300016387\|Ga0182040_10732854	Not Available	810	Open in IMG/M
3300016387\|Ga0182040_10796006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	779	Open in IMG/M
3300016387\|Ga0182040_11726971	All Organisms → cellular organisms → Bacteria → Proteobacteria	535	Open in IMG/M
3300016404\|Ga0182037_11213206	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300016422\|Ga0182039_11879587	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300018081\|Ga0184625_10213265	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300018082\|Ga0184639_10334852	All Organisms → cellular organisms → Bacteria → Proteobacteria	791	Open in IMG/M
3300018465\|Ga0190269_10163246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1166	Open in IMG/M
3300018482\|Ga0066669_11898169	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300019867\|Ga0193704_1020730	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300019873\|Ga0193700_1011755	Not Available	1417	Open in IMG/M
3300019876\|Ga0193703_1009884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1427	Open in IMG/M
3300020002\|Ga0193730_1104288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	788	Open in IMG/M
3300020579\|Ga0210407_11042542	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300020580\|Ga0210403_10840114	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300021078\|Ga0210381_10247173	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300021178\|Ga0210408_10989120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	651	Open in IMG/M
3300021363\|Ga0193699_10022864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2294	Open in IMG/M
3300021405\|Ga0210387_11038447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	717	Open in IMG/M
3300021478\|Ga0210402_11084701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	728	Open in IMG/M
3300026538\|Ga0209056_10408084	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300026538\|Ga0209056_10491104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	651	Open in IMG/M
3300027310\|Ga0207983_1028777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	692	Open in IMG/M
3300027874\|Ga0209465_10488235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300028536\|Ga0137415_10410827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1159	Open in IMG/M
3300028712\|Ga0307285_10014779	All Organisms → cellular organisms → Bacteria	1731	Open in IMG/M
3300028713\|Ga0307303_10012219	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300028717\|Ga0307298_10004993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3184	Open in IMG/M
3300028717\|Ga0307298_10080064	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300028719\|Ga0307301_10045363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1345	Open in IMG/M
3300028755\|Ga0307316_10301601	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300028768\|Ga0307280_10025214	All Organisms → cellular organisms → Bacteria	1739	Open in IMG/M
3300028807\|Ga0307305_10481328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300031561\|Ga0318528_10661956	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300031561\|Ga0318528_10699704	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300031564\|Ga0318573_10753550	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300031679\|Ga0318561_10073316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1758	Open in IMG/M
3300031679\|Ga0318561_10848929	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300031724\|Ga0318500_10400255	All Organisms → cellular organisms → Bacteria → Proteobacteria	682	Open in IMG/M
3300031744\|Ga0306918_10332735	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300031747\|Ga0318502_10061043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2009	Open in IMG/M
3300031751\|Ga0318494_10410078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	786	Open in IMG/M
3300031764\|Ga0318535_10471744	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300031765\|Ga0318554_10567536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300031770\|Ga0318521_10458981	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300031779\|Ga0318566_10444731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	636	Open in IMG/M
3300031781\|Ga0318547_11039250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	512	Open in IMG/M
3300031821\|Ga0318567_10179300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1179	Open in IMG/M
3300031821\|Ga0318567_10679711	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300031879\|Ga0306919_10646563	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300031897\|Ga0318520_10966945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	537	Open in IMG/M
3300031941\|Ga0310912_10261651	All Organisms → cellular organisms → Bacteria	1333	Open in IMG/M
3300031941\|Ga0310912_10569829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	881	Open in IMG/M
3300031941\|Ga0310912_10571306	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300031941\|Ga0310912_10839502	Not Available	709	Open in IMG/M
3300031945\|Ga0310913_10012402	All Organisms → cellular organisms → Bacteria → Proteobacteria	5143	Open in IMG/M
3300031947\|Ga0310909_10073764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2688	Open in IMG/M
3300031947\|Ga0310909_10295288	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300031959\|Ga0318530_10256740	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300032001\|Ga0306922_11241856	All Organisms → cellular organisms → Bacteria → Proteobacteria	756	Open in IMG/M
3300032035\|Ga0310911_10513642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	694	Open in IMG/M
3300032059\|Ga0318533_10644419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	777	Open in IMG/M
3300032059\|Ga0318533_11318144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	527	Open in IMG/M
3300032076\|Ga0306924_10161939	All Organisms → cellular organisms → Bacteria → Proteobacteria	2564	Open in IMG/M
3300032090\|Ga0318518_10634663	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300032180\|Ga0307471_100699237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1178	Open in IMG/M
3300032261\|Ga0306920_100493989	All Organisms → cellular organisms → Bacteria	1816	Open in IMG/M
3300033289\|Ga0310914_10388096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	1264	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.34%
Host-Associated	Host-Associated	5.66%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.45%
Plants	Host-Associated → Plants	5.66%
Aquatic	Environmental → Aquatic	1.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.03%
Sediment	Environmental → Aquatic → Sediment	1.26%
Freshwater	Environmental → Aquatic → Freshwater	0.63%
Roots	Host-Associated → Plants → Roots	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.73%
Loam	Environmental → Terrestrial → Soil → Loam	15.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.26%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.63%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.63%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.11%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.26%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.63%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.63%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.06%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.29%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.14%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.26%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.26%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.63%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027310	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100919522	3300000597	Forest Soil	LVPNDRINNVVAPDGGAHVCAPRQEGANKGVVFCVVLPPEG*
AF_2010_repII_A100DRAFT_10313741	3300000655	Forest Soil	SNKINNVIAPDGGAHVCAPKQEGVNKGVLFCVVLPPDG*
AF_2010_repII_A001DRAFT_100805131	3300000793	Forest Soil	GVWTPVPYDKINNVVAPDGGAHVCAPRQVGPNKGVIFCVILPSEG*
AF_2010_repII_A001DRAFT_101011381	3300000793	Forest Soil	VPYDKINNVVAPDGGAHVCAPRQVGPNKGTIFCVILPSEG*
AF_2010_repII_A001DRAFT_101070702	3300000793	Forest Soil	NNVVAPDGGAHVCAPRQVGQNKGVLFCVILPSEG*
JGI1027J12803_1019270882	3300000955	Soil	YDKINNVVAPDGGAHVCAPRQVGPNKGVIFCVILPSEG*
JGI1027J12803_1032750242	3300000955	Soil	DKINHVVAPDGGAHVCAPAQEGLNKGVLFCVVLPPDG*
JGI1027J12803_1060104441	3300000955	Soil	WTPVPNDKINNVVAPDGGAHVCAPRQEGENKGVLFCVILPPVS*
JGI10216J12902_1030426462	3300000956	Soil	VPYDKINNAVAPDGGAHVCAPRQVGPNKGVLFCVILPSEG*
F14TB_1002346992	3300001431	Soil	PNDRINNVIAPDGGAHVCAPRQVGPNKGVVFCVIVPPEG*
Ga0066388_1001477151	3300005332	Tropical Forest Soil	PPSVIQHLAAPDGGAHVCAPRQEGTNKGVLYCVILPPDM*
Ga0066388_1044304932	3300005332	Tropical Forest Soil	WTPVPYDKINNVVAPDGGAHVCAPRQVGPNKGVIFCVILPSEG*
Ga0070713_1000682251	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	WTPVPYDKINNAVAPDGGAHVCAPRQVGPNKGVIFCVILPLEG*
Ga0070710_113592691	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	AWTPVPYDKINNVVAPDGGAHVCAPRQVGPNKGVIFCVILPSEG*
Ga0066686_110322272	3300005446	Soil	PVPYDKINNMVAPDGGAHVCAPRQMGQNKGVLFCVILPSDG*
Ga0066689_100743074	3300005447	Soil	WTPVPHDKINNVVAPDGGAHVCAPRQVGPNKGVIFCVILPSEG*
Ga0070707_1002249854	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	PVPYDKINNVVAPDGGAHVCAPRQVGPNKGVIFCVILPSEG*
Ga0070697_1001259864	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	PVPYDKINNVVAPDGGAHVCAPRQVGQNKGVIFCVILPSEG*
Ga0066700_110270191	3300005559	Soil	DKINNLVAPDGGAHVCAPRQVGPNKGVIFCVILPSEG*
Ga0066905_10001483811	3300005713	Tropical Forest Soil	PVPYDKINNVIAPDGGAHVCAPKQAGSNKGVIFCVILPSEG*
Ga0066905_1000923501	3300005713	Tropical Forest Soil	NDKINNVVAPDGGAHVCAPRQEGANKGVLFCVILPPVS*
Ga0066905_1007556043	3300005713	Tropical Forest Soil	KINNVVAPDGGAHVCAPRQMGPNKGVLFCVILPFEG*
Ga0066905_1011426733	3300005713	Tropical Forest Soil	PYNKINNVVAPDGGAHVCAPRQVGQNKGVLFCVILPSEG*
Ga0066905_1016036651	3300005713	Tropical Forest Soil	INNVVAPDGGAHVCAPRQVGQNKGVLFCVILPSEG*
Ga0066905_1023144732	3300005713	Tropical Forest Soil	DKINNVVAPDGGAHVCAPRQVGPNKGVIFCVILPSEG*
Ga0066903_1004152511	3300005764	Tropical Forest Soil	NDKINSVVAPDGGAHVCAPRQVGPNKGVLFCVVLPPES*
Ga0066903_1005184364	3300005764	Tropical Forest Soil	PVPNDKINNVVAPDGGAHVCAPRQLGSNKGVLFCVVLPPEG*
Ga0066903_1008923696	3300005764	Tropical Forest Soil	TPVPYDKINNVVAPDGGAHVCAPRQVGQNKGVIFCVILPSEG*
Ga0066903_1019213591	3300005764	Tropical Forest Soil	YDKINNVVAPDGGAHVCAPRQVGQNKGVIFCVILPSEG*
Ga0066903_1024127381	3300005764	Tropical Forest Soil	MPVPSNKINNVIAPDGGAHVCAPKQEGVNKGVLFCVV
Ga0066903_1034352893	3300005764	Tropical Forest Soil	DKINNVVAPDGGAHVCAPRQVGPNKGTIFCVILPSEG*
Ga0066903_1055371852	3300005764	Tropical Forest Soil	NDRINNVVAPDGGAHVCAPRQEGANKGVVFCVVLPPEG*
Ga0066903_1062492322	3300005764	Tropical Forest Soil	DKINNVIAPDGGAHVCAPKQEGVNRGVLFCVVLPPDG*
Ga0075363_1009106132	3300006048	Populus Endosphere	SKINNVIAPDGGAHVCAPEQEGVNKGVLFCVVLPPDG*
Ga0070715_100049406	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	RNKINNVIAPDGGAHVCAPKQEGVNRGMLFCVVLPPDG*
Ga0070712_1003241441	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPVPSNKINNVIAPDGGAHVCAPKQEGVNKGVLFCVVLPPDG*
Ga0070712_1011706602	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	INNVIAPDGGAHVCAPKQEGVNKGVLFCVVLPPDG*
Ga0066659_105665851	3300006797	Soil	PVPNDKINNVVAPDGGAHVCAPRQEGPNKGVLFCVVLPPEG*
Ga0079221_103586311	3300006804	Agricultural Soil	AWTPVPKDTILHVEAPDGGAHVCAPRQVGANRGIIYCVVLPPET*
Ga0075421_1007640051	3300006845	Populus Rhizosphere	DKINNVVAPDGGAHVCAPRQVGSNKGVLFCVILPSEG*
Ga0075430_1016280473	3300006846	Populus Rhizosphere	DKINNVVAPDGGAHVCAPRQVGPNKGVLFCVILPSEG*
Ga0075433_114387081	3300006852	Populus Rhizosphere	PYDKINNVVAPDGGAHVCAPRQVGQNKGVLFCVILPSEG*
Ga0075425_1001489631	3300006854	Populus Rhizosphere	DDKINHVVAPDGGAHVCAPRQEGLNKGVLFCVVLPPDG*
Ga0075425_1024390882	3300006854	Populus Rhizosphere	KINNVVAPDGGAHVCAPRQIGANKGVLFCVILPSEG*
Ga0075424_1013971691	3300006904	Populus Rhizosphere	PYDKINNVVAPDGGAHVCAPRQVGQNKGVIFCVILPSEG*
Ga0111538_105759751	3300009156	Populus Rhizosphere	RVPSDKINNVVAPDGGAHVCAPRQVGPNKGVLFCVILPSEG*
Ga0075423_131429381	3300009162	Populus Rhizosphere	NNAVAPDGGAHVCAPRQVGPNKGVIFCVILPLEG*
Ga0126374_105249562	3300009792	Tropical Forest Soil	EWTPVPNDKINNVAAPDGGAHVCAPPQEGQNKGVLFCVVLPPEG*
Ga0126374_116089622	3300009792	Tropical Forest Soil	PSNKINNVIAPDGGAHVCAPKQEGVNKGVLFCVILPPDG*
Ga0126380_116315662	3300010043	Tropical Forest Soil	EWTPVPNDKINNVVAPDGGAHVWAPRQTGPNKGVLFCVVLPPEG*
Ga0126380_118155621	3300010043	Tropical Forest Soil	DKINNVVAPDGGAHVCAPRQVGPNKGVIFCVILPSEV*
Ga0126382_102310294	3300010047	Tropical Forest Soil	VWTPVPYDKINNVVAPDGGAHVCAPRQVGPNKGVLFCVILPSEG*
Ga0126382_123747881	3300010047	Tropical Forest Soil	WKPVPYDKINNVIAPDGDAHVCAPRQAGPNKGVLFCVILPSES*
Ga0126373_130486301	3300010048	Tropical Forest Soil	DKINNAVAPDGGAHVCAPRQVGPNKGVIFCVILPLEG*
Ga0099796_102186551	3300010159	Vadose Zone Soil	MPVPTDKINNVVAPDGGAHVCAPRQVGSNKGVLFCVILPSEG*
Ga0126378_115642992	3300010361	Tropical Forest Soil	VPYDKINNVIAPDGGAHVCAPRQVGPNRGVIFCVILPSEG*
Ga0126377_128618572	3300010362	Tropical Forest Soil	WTPVPKDKINSVVAPDGGAHVCAPRQTGPNKGVLFCVVLPPEG*
Ga0126379_112720623	3300010366	Tropical Forest Soil	WTPVPYDKINNVVAPDGGAHVCAPRQVGQNKGVIFCVILPSEG*
Ga0126379_118835812	3300010366	Tropical Forest Soil	PNDRINNVVAPDGGAHVCAPRQEGLNKGVVFCVVLPPEG*
Ga0126379_133165022	3300010366	Tropical Forest Soil	TPVPYDKINNVVAPDGGAHVCAPRQMGPNKGVLFCVILPFEG*
Ga0126381_1015057001	3300010376	Tropical Forest Soil	PVLSNKINTVIAPDGGAHVCAPKQEGVNKGVLFCVVLPPDG*
Ga0126381_1017230312	3300010376	Tropical Forest Soil	DRINNVVAPDGGAHVCAPRQEGLNKGVVFCVVLPPEG*
Ga0136449_1043649652	3300010379	Peatlands Soil	IPVPNDKINNVVAPDGGAHVCAPRQVGANKGVLFCIILPPEG*
Ga0136449_1046564692	3300010379	Peatlands Soil	INNVVAPDGGAHVCAPRQIGANKGVVFCVILPPEG*
Ga0126383_109832014	3300010398	Tropical Forest Soil	VPYDKINNVVAPDGGAHVCAPRQVGQNKGVIFCVILSSEG*
Ga0126383_113229812	3300010398	Tropical Forest Soil	WTPVPYDKINNVVAPDGGAHVCAPRQLGPNKGVLFCVILPSEG*
Ga0126383_125964401	3300010398	Tropical Forest Soil	KINNVVAPDGGAHVCAPRQVGQNKGVIFCVILLSEG*
Ga0137393_102469571	3300011271	Vadose Zone Soil	KINNVVAPDGGAHVCAPRQVGPNKGVLFCVVLPPEG*
Ga0137365_110346791	3300012201	Vadose Zone Soil	TPVPYDRINNVVAPDGGAHVCAPRQLGPNKGVIFCVILPSEG*
Ga0137377_111645891	3300012211	Vadose Zone Soil	WTPVPNDRINNVVAPDGGAHVCAPRQVGPNKGVLFCVVLPPEG*
Ga0137386_112400031	3300012351	Vadose Zone Soil	NDKINNVIAPDGGAHVCAPRQVGPNKGVVFCVVVPPEG*
Ga0137371_103455683	3300012356	Vadose Zone Soil	FDKINNVVAPDGGAHVCAPRQVGPNKGVLFCVILPSEG*
Ga0137385_115054111	3300012359	Vadose Zone Soil	LVPNDKINNVVAPDGGAHVCAPRQAGPNKEVLFCVILPPEG*
Ga0137358_101057551	3300012582	Vadose Zone Soil	PYDKINNMVAPDGGAHVCAPRQMGQNKGVLFCVILPSDG*
Ga0137407_117518442	3300012930	Vadose Zone Soil	VPYDKINNVVAPDGGAHVCAPRQVGPNKGVLFCVILPSEG*
Ga0164298_117057601	3300012955	Soil	KINNVIAPDGGAHVCAPKQEGVNKGVLFCVVLPPDG*
Ga0164303_113702281	3300012957	Soil	PVPNDKINNVVEPDGGAHVCAPMQAGANKGVLFCVVLPPEG*
Ga0126369_106844433	3300012971	Tropical Forest Soil	VWMPVPYDKINNVVAPDGGAHVCAPRQVGQNKGVIFCVILPSEG*
Ga0126369_107194641	3300012971	Tropical Forest Soil	VPSDKINDVIAPDGGAHVCAPEQNGTYKGILFCVILPPQT*
Ga0126369_124285221	3300012971	Tropical Forest Soil	PYDKINNVVAPDGGAHVCAPRQVGPNKGVIFCVILPSEG*
Ga0126369_133424931	3300012971	Tropical Forest Soil	KINNVVAPDGGAHVCAPRQVGQNKGVLFCVILPSEG*
Ga0137418_112197772	3300015241	Vadose Zone Soil	DDKINNVIAPDGGAHVCAPRQEGLNKGVLFCVVLPPEG*
Ga0182036_114294452	3300016270	Soil	DRINNVVAPDGGAHVCAPPQKGSNKGVLFCVVLPPEG
Ga0182041_100357391	3300016294	Soil	DKINNVVAPDGGAHVCAPRQVGQNKGVIFCVVLPSEG
Ga0182041_118209671	3300016294	Soil	INNVVAPDGGAHVCAPRQVGPNKGVIFCVILPSEG
Ga0182033_108842873	3300016319	Soil	GAWTPVPYDKINNVVAPDGGAHVCAPRQVGQNKGVIFCVVLPSEG
Ga0182033_113882461	3300016319	Soil	DRINNVVAPDGGAHVCAPTQFGPNKGIIFCVILPPEG
Ga0182035_102401551	3300016341	Soil	GAWMPVPSNKINNVIAPDGGAHVCAPKQEGVNKGVLFCVVLPPDG
Ga0182035_114664761	3300016341	Soil	RVPYDKINNVVAPDGGAHVCAPRQVGQNKGVIFCVILPSEG
Ga0182032_101273821	3300016357	Soil	GAWPPVPYDKINNVVAPDGGAHVCAPRQVGQNKGVIFCVVLPSEG
Ga0182040_104605003	3300016387	Soil	VPYDKINNVVAPDGGAHVCAPRQVGQNKGVIFCVILPSEG
Ga0182040_107328542	3300016387	Soil	WMPVPSNKINNVIAPDGGAHVCAPKQEGVNKGVLFCVVLPPDG
Ga0182040_107960061	3300016387	Soil	KINNVVAPDGGAHVCAPRQVGQNKGVIFCVILPSEG
Ga0182040_117269712	3300016387	Soil	EWTPVPNDSINNVVAPDGGAHVCAPRQEGLDKGVVFCVVLPPEG
Ga0182037_112132062	3300016404	Soil	NKINNVIAPDGGAHVCAPKQVGVNKGVLFCVILPPDG
Ga0182039_118795871	3300016422	Soil	WTPVPNDRINNVVAPDGGAHVCAPRQEGLNKGVMFCVVLPPEG
Ga0184625_102132652	3300018081	Groundwater Sediment	PNDKINNVVAPDGGAHVCAPRQAGPNKGVLFCVVLPPEG
Ga0184639_103348521	3300018082	Groundwater Sediment	KINNVVAPDGGAHVCAPQQEGRNKGVLFCVILPSEG
Ga0190269_101632462	3300018465	Soil	MPVPNDKINNVIAPDGGAHVCAPKQAGQNKGVLFCGQL
Ga0066669_118981691	3300018482	Grasslands Soil	MLVPNDKINNIAAPDGGAHVCAPKQEGRNKGFLFCVILPLEG
Ga0193704_10207301	3300019867	Soil	PNDKINNVVAPDGGAHVCAPQQEGRNKGVLFCVILPSEG
Ga0193700_10117552	3300019873	Soil	MTVAPITSAMRSMPVPNDKINNVVAPDGGAHVCAPQQEGRNKGVLFCVILPSEG
Ga0193703_10098842	3300019876	Soil	PNDKINNVVAPDGGAHVCAPRQVGSNKGVLFCVILPSEG
Ga0193730_11042882	3300020002	Soil	PVPNDKINNVVAPDGGTHVCAPRQEGPNKGVLFCVVLPPEG
Ga0210407_110425422	3300020579	Soil	EWVRVPVDTINNVVAPDSGAHVCAPEQIGRSKGVIFCVILPSEG
Ga0210403_108401142	3300020580	Soil	PVPRNKINNVIAPDGGAHVCAPKQEGVNKGVLFCVILPPDG
Ga0210381_102471731	3300021078	Groundwater Sediment	SDKINNVVAPDGGAHVCAPRQVGPNKGVLFCVILPSEG
Ga0210408_109891202	3300021178	Soil	WTPVPYDKINNVIAPDGGAHVCAPRQVGPNKGVIFCVILPSEG
Ga0193699_100228641	3300021363	Soil	VPNDKINNVVAPDGGAHVCAPRQVGSNKGVLFCVILPSEG
Ga0210387_110384471	3300021405	Soil	YDKINNVVAPDGGAHVCAPTQVGANKGVIFCVILPSEG
Ga0210402_110847011	3300021478	Soil	PVPYDKINNVVAPDGGAHVCAPRQVGPNKGVIFCVILPSEG
Ga0209056_104080841	3300026538	Soil	VPYDKINNLVAPDGGAHVCAPRQVGPNKGVIFCVILPSEG
Ga0209056_104911042	3300026538	Soil	PYDKINNAVAPDGGAHVCAPRQVGPNKGVIYCVILPLEG
Ga0207983_10287772	3300027310	Soil	NKINNVIAPDGGAHVCAPKQEGVNKGVLFCVILPPDG
Ga0209465_104882351	3300027874	Tropical Forest Soil	KINNVVAPDGGAHVCAPRQVGQNKGVLFCVILPSEG
Ga0137415_104108272	3300028536	Vadose Zone Soil	DKINNVVAPDGGAHVCAPRQVGRDKGVLFCVILPSEG
Ga0307285_100147791	3300028712	Soil	INNVVAPDGGAHVCAPRQEGRNKGVLFCVILPSEG
Ga0307303_100122192	3300028713	Soil	GEWMPVPNDKINNVVAPDGGAHVCAPQQEGRNKGVLFCVILPSEG
Ga0307298_100049936	3300028717	Soil	DEWMPVPNDKINNVVAPDGGAHVCAPQQEGRNKGVLFCVILPSEG
Ga0307298_100800641	3300028717	Soil	NDKINNVVAPDGGAHVCAPRQAGPNKGVLFCVVLPPEG
Ga0307301_100453631	3300028719	Soil	EWMPVPSDKINNVVAPDGGAHVCAPRQVGRDKGVLFCVILPSEG
Ga0307316_103016011	3300028755	Soil	VPNDKINNVVAPDGGAHVCAPRQEGLNKGVLFCVILPSEG
Ga0307280_100252143	3300028768	Soil	MPVPSDKINNVVAPDGGAHVCAPRQVGRDKGVLFCVILPSEG
Ga0307305_104813281	3300028807	Soil	DKINNVVAPDGGAHVCAPRQIGPNKGVLFCVILPSEG
Ga0318528_106619561	3300031561	Soil	PVPYDKINNVVAPDGGAHVCAPRQVGQNKGVIFCVILPSEG
Ga0318528_106997041	3300031561	Soil	DKINNVVAPDGGAHVCAPRQVGPNKGIIFCVILPSEG
Ga0318573_107535503	3300031564	Soil	GRWMPVPSNKINNVIAPDGGAHVCAPKQEGVNKGVLFCVVLPPDG
Ga0318561_100733164	3300031679	Soil	PSNKINNVIAPDGGAHVCAPKQEGVNKGVLFCVVLPPDG
Ga0318561_108489292	3300031679	Soil	KINNVVAPDGGAHVCAPRQVGQNKGAIFCVILPSEG
Ga0318500_104002553	3300031724	Soil	VPSNKINNVIAPDGGAHVCAPKQEGVNKGVLFCVVLPPDG
Ga0306918_103327353	3300031744	Soil	MPVPSNKINNVIAPDGGAHVCAPKQEGVNKGVLFCVVLPPDG
Ga0318502_100610433	3300031747	Soil	VWTPVPYDKINNVVAPDGGAHVCAPRQVGPNKGIIFCVILPSEG
Ga0318494_104100781	3300031751	Soil	VWTPVPYDKINNVVAPDGGAHVCAPRQVGPNKGVIFCVILPSEG
Ga0318535_104717441	3300031764	Soil	EWTPVPYDKINNVVPPDGGAHVCAPRQVGQNKGVIFCVILPSEG
Ga0318554_105675362	3300031765	Soil	PYDKINNVVAPDGGAHVCAPRQVGPNKGIIFCVILPSEG
Ga0318521_104589811	3300031770	Soil	AWTPVPYDKINNVVAPDGGAHVCAPRQVGQNKGVIFCVILPSEG
Ga0318566_104447312	3300031779	Soil	YDKINNVVAPDGGAHVCAPRQVGPNKGVIFCVILPSEG
Ga0318547_110392501	3300031781	Soil	WTLVPYDKINNVVAPDGGAHVCAPRQVGPNKGVIFCVILPSEG
Ga0318567_101793001	3300031821	Soil	VPYDKINNVVAPDGGAHVCAPRQVGPNKGIIFCVILPSEG
Ga0318567_106797111	3300031821	Soil	YDKINNVVAPDGGAHVCAPRQVGQNKGVIFCVILPSEG
Ga0306919_106465631	3300031879	Soil	DKINNVVAPDGGAHVCAPRQVGQNKGVLFCVILPSEG
Ga0318520_109669451	3300031897	Soil	NKINNVVAPDGGAHVCAPRQVGPNKGVLFCVSLPSEG
Ga0310912_102616514	3300031941	Soil	KINNVVAPDGGAHVCAPRQVGPNKGVIFCVILPSEG
Ga0310912_105698293	3300031941	Soil	PVPYDKINNVVAPDGGAHVCAPRQLGPNKGVIFCVILPSEG
Ga0310912_105713061	3300031941	Soil	PYDKINNVVAPDGGAHVCAPRQVGQNKGVIFCVILPSEG
Ga0310912_108395023	3300031941	Soil	NKINNVIAPDGGAHVCAPKQEGVNKGVLFCVVLPPDG
Ga0310913_100124029	3300031945	Soil	WTPVPYDKINNVVAPDGGAHVCAPRQVGQNKGVIFCVVLPSEG
Ga0310909_100737645	3300031947	Soil	TPVPYDKINNVVAPDGGAHVCAPRQVGQNKGVIFCVVLPSEG
Ga0310909_102952881	3300031947	Soil	YDKINNVVAPDGGAHVCAPRQVGQNKGVLFCVILPSEG
Ga0318530_102567401	3300031959	Soil	INKVIAPDGGAHVCAPKQEGVNKGVLFCVVLPPDG
Ga0306922_112418561	3300032001	Soil	DKIDNVIAPDGGAHVCAPRQVGPNKGVIFCVILPSEG
Ga0310911_105136421	3300032035	Soil	DKINNVVAPDGGAHVCAPRQVGQNKGVIFCVILPSEG
Ga0318533_106444192	3300032059	Soil	AWTRVPYDKINNVVAPDGGAHVCAPRQVGQNKGVIFCVILPSEG
Ga0318533_113181442	3300032059	Soil	VAYDKINNVIAPDGGAHVCAPTQVGANKGVIFCVILPSEG
Ga0306924_101619391	3300032076	Soil	VPNDRINNVVAPDGGAHVCAPRQEGLNKGVVFCVVLPPEG
Ga0318518_106346631	3300032090	Soil	PYDKINNVVAPDGGAHVCAPRQVGQNKGVIFCVVLPSEG
Ga0307471_1006992371	3300032180	Hardwood Forest Soil	AWTPVPYDKINNVIAPDGGAHVCAPSQVGPNKGVIFCVILPSEG
Ga0306920_1004939891	3300032261	Soil	TDKINNVVAPDGGAHVCAPRQVGPNKGVLFCVILPSEG
Ga0310914_103880962	3300033289	Soil	RINNVVAPDGGAHVCAPRQVGLNKGILFCVILPPEG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F041923

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences