Metagenome / Metatranscriptome Family F041950

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041950
Family Type	Metagenome / Metatranscriptome
Number of Sequences	159
Average Sequence Length	46 residues
Representative Sequence	LLISHPEVVDIEILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV
Number of Associated Samples	120
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.55 %
% of genes near scaffold ends (potentially truncated)	92.45 %
% of genes from short scaffolds (< 2000 bps)	80.50 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.535 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (34.591 % of family members)
Environment Ontology (ENVO)	Unclassified (42.767 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.138 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 52.27% Coil/Unstructured: 47.73%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF13561	adh_short_C2	7.55
PF05199	GMC_oxred_C	6.29
PF00667	FAD_binding_1	5.66
PF00175	NAD_binding_1	2.52
PF13649	Methyltransf_25	1.89
PF00582	Usp	1.26
PF00440	TetR_N	1.26
PF07969	Amidohydro_3	1.26
PF00561	Abhydrolase_1	0.63
PF12847	Methyltransf_18	0.63
PF00583	Acetyltransf_1	0.63
PF13792	Obsolete Pfam Family	0.63
PF00903	Glyoxalase	0.63
PF13738	Pyr_redox_3	0.63
PF13450	NAD_binding_8	0.63
PF00999	Na_H_Exchanger	0.63
PF00512	HisKA	0.63
PF08241	Methyltransf_11	0.63
PF12697	Abhydrolase_6	0.63
PF00171	Aldedh	0.63
PF01545	Cation_efflux	0.63
PF11329	DUF3131	0.63
PF03450	CO_deh_flav_C	0.63
PF01814	Hemerythrin	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	6.29
COG0369	Flavoprotein (flavin reductase) subunit CysJ of sulfite and N-hydroxylaminopurine reductases	Nucleotide transport and metabolism [F]	5.66
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.63
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.63
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.63
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.63
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.63
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.63
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.63
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.63
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.63
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.63
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.53 %
Unclassified	root	N/A	14.47 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.53 %
Unclassified	root	N/A	14.47 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.53 %
Unclassified	root	N/A	14.47 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	71.07 %
Unclassified	root	N/A	14.47 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	3.77 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	36.48 %
Unclassified	root	N/A	14.47 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	11.95 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	3.77 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	31.45 %
Unclassified	root	N/A	14.47 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	11.95 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3.77 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	15.72 %
Unclassified	root	N/A	14.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	11.95 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	3.77 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.63 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.72 %
Unclassified	root	N/A	14.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	11.95 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3.77 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.63 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.72 %
Unclassified	root	N/A	14.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	11.95 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3.77 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.63 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.72 %
Unclassified	root	N/A	14.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	11.95 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3.77 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig95522	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	596	Open in IMG/M
3300000956\|JGI10216J12902_118055760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	556	Open in IMG/M
3300004633\|Ga0066395_10402227	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300005332\|Ga0066388_103014864	All Organisms → cellular organisms → Bacteria → Terrabacteria group	860	Open in IMG/M
3300005363\|Ga0008090_15463644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	861	Open in IMG/M
3300005363\|Ga0008090_15823426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300005434\|Ga0070709_10266127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1240	Open in IMG/M
3300005437\|Ga0070710_10215703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1218	Open in IMG/M
3300005439\|Ga0070711_100785152	Not Available	807	Open in IMG/M
3300005530\|Ga0070679_101833155	Not Available	555	Open in IMG/M
3300005556\|Ga0066707_10194955	Not Available	1305	Open in IMG/M
3300005764\|Ga0066903_100132876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3508	Open in IMG/M
3300005764\|Ga0066903_108499000	All Organisms → cellular organisms → Bacteria → Terrabacteria group	523	Open in IMG/M
3300005842\|Ga0068858_102489364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300005983\|Ga0081540_1325069	Not Available	527	Open in IMG/M
3300006028\|Ga0070717_10514948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1082	Open in IMG/M
3300006173\|Ga0070716_101264459	Not Available	595	Open in IMG/M
3300006796\|Ga0066665_10872381	Not Available	700	Open in IMG/M
3300006854\|Ga0075425_100993885	Not Available	957	Open in IMG/M
3300006854\|Ga0075425_102745906	Not Available	542	Open in IMG/M
3300006871\|Ga0075434_100163390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2246	Open in IMG/M
3300006893\|Ga0073928_10763830	All Organisms → cellular organisms → Bacteria → Terrabacteria group	670	Open in IMG/M
3300006904\|Ga0075424_100221934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2008	Open in IMG/M
3300006914\|Ga0075436_100144576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1672	Open in IMG/M
3300009088\|Ga0099830_10034406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3455	Open in IMG/M
3300009147\|Ga0114129_13414683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300009792\|Ga0126374_10904238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	684	Open in IMG/M
3300010043\|Ga0126380_10026096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2888	Open in IMG/M
3300010043\|Ga0126380_11795123	All Organisms → cellular organisms → Bacteria → Terrabacteria group	554	Open in IMG/M
3300010046\|Ga0126384_11636749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300010046\|Ga0126384_11869766	All Organisms → cellular organisms → Bacteria → Terrabacteria group	571	Open in IMG/M
3300010303\|Ga0134082_10525978	All Organisms → cellular organisms → Bacteria → Terrabacteria group	518	Open in IMG/M
3300010321\|Ga0134067_10190612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	749	Open in IMG/M
3300010337\|Ga0134062_10180583	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	953	Open in IMG/M
3300010358\|Ga0126370_10257989	Not Available	1357	Open in IMG/M
3300010358\|Ga0126370_10452277	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1071	Open in IMG/M
3300010358\|Ga0126370_12389544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	525	Open in IMG/M
3300010360\|Ga0126372_10355509	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1316	Open in IMG/M
3300010360\|Ga0126372_11258526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767	Open in IMG/M
3300010360\|Ga0126372_12647271	All Organisms → cellular organisms → Bacteria → Terrabacteria group	553	Open in IMG/M
3300010361\|Ga0126378_10798895	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1053	Open in IMG/M
3300010361\|Ga0126378_12528466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	586	Open in IMG/M
3300010362\|Ga0126377_12495269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300010366\|Ga0126379_10208735	All Organisms → cellular organisms → Bacteria	1886	Open in IMG/M
3300010366\|Ga0126379_10940558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	968	Open in IMG/M
3300010366\|Ga0126379_13886344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	500	Open in IMG/M
3300010371\|Ga0134125_10095692	All Organisms → cellular organisms → Bacteria	3305	Open in IMG/M
3300010371\|Ga0134125_11056506	All Organisms → cellular organisms → Bacteria → Terrabacteria group	889	Open in IMG/M
3300010376\|Ga0126381_100887537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1283	Open in IMG/M
3300010376\|Ga0126381_102168199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	799	Open in IMG/M
3300010401\|Ga0134121_10037803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3934	Open in IMG/M
3300010401\|Ga0134121_13267412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300012199\|Ga0137383_10527594	Not Available	864	Open in IMG/M
3300012203\|Ga0137399_10734473	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	831	Open in IMG/M
3300012350\|Ga0137372_10106813	All Organisms → cellular organisms → Bacteria	2339	Open in IMG/M
3300012363\|Ga0137390_10074972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3318	Open in IMG/M
3300012944\|Ga0137410_10683947	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	854	Open in IMG/M
3300012955\|Ga0164298_10932805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	635	Open in IMG/M
3300012971\|Ga0126369_10417605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1383	Open in IMG/M
3300014745\|Ga0157377_10978498	Not Available	639	Open in IMG/M
3300015052\|Ga0137411_1117794	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	580	Open in IMG/M
3300015371\|Ga0132258_10688496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2573	Open in IMG/M
3300016294\|Ga0182041_10300848	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1329	Open in IMG/M
3300016294\|Ga0182041_12020257	All Organisms → cellular organisms → Bacteria → Terrabacteria group	537	Open in IMG/M
3300016357\|Ga0182032_10030618	All Organisms → cellular organisms → Bacteria	3277	Open in IMG/M
3300017926\|Ga0187807_1313656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	523	Open in IMG/M
3300017959\|Ga0187779_11126048	Not Available	549	Open in IMG/M
3300018058\|Ga0187766_10431743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	876	Open in IMG/M
3300018060\|Ga0187765_10043229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2288	Open in IMG/M
3300018060\|Ga0187765_11192740	Not Available	533	Open in IMG/M
3300021405\|Ga0210387_10654885	All Organisms → cellular organisms → Bacteria → Terrabacteria group	932	Open in IMG/M
3300021477\|Ga0210398_10299215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1312	Open in IMG/M
3300025544\|Ga0208078_1128187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300025898\|Ga0207692_10027677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2673	Open in IMG/M
3300025898\|Ga0207692_10036140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2406	Open in IMG/M
3300025906\|Ga0207699_11316202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300025916\|Ga0207663_10043798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2743	Open in IMG/M
3300025921\|Ga0207652_11446912	Not Available	591	Open in IMG/M
3300025928\|Ga0207700_10251769	Not Available	1509	Open in IMG/M
3300026078\|Ga0207702_11994586	Not Available	571	Open in IMG/M
3300026551\|Ga0209648_10650190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	577	Open in IMG/M
3300027646\|Ga0209466_1010277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1979	Open in IMG/M
3300027775\|Ga0209177_10362259	Not Available	571	Open in IMG/M
3300027874\|Ga0209465_10319029	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300027874\|Ga0209465_10403534	Not Available	684	Open in IMG/M
3300027898\|Ga0209067_10196030	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300028884\|Ga0307308_10435789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	628	Open in IMG/M
3300030740\|Ga0265460_12410780	All Organisms → cellular organisms → Bacteria → Terrabacteria group	558	Open in IMG/M
3300031543\|Ga0318516_10044411	All Organisms → cellular organisms → Bacteria	2400	Open in IMG/M
3300031543\|Ga0318516_10141152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1381	Open in IMG/M
3300031543\|Ga0318516_10176679	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1229	Open in IMG/M
3300031545\|Ga0318541_10108300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1498	Open in IMG/M
3300031546\|Ga0318538_10035982	All Organisms → cellular organisms → Bacteria	2346	Open in IMG/M
3300031546\|Ga0318538_10060528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1877	Open in IMG/M
3300031546\|Ga0318538_10141134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1268	Open in IMG/M
3300031549\|Ga0318571_10071505	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1081	Open in IMG/M
3300031549\|Ga0318571_10386564	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300031561\|Ga0318528_10263360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	925	Open in IMG/M
3300031564\|Ga0318573_10056659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1927	Open in IMG/M
3300031564\|Ga0318573_10078395	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1664	Open in IMG/M
3300031572\|Ga0318515_10041824	All Organisms → cellular organisms → Bacteria	2278	Open in IMG/M
3300031572\|Ga0318515_10724903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300031573\|Ga0310915_10410885	All Organisms → cellular organisms → Bacteria → Terrabacteria group	961	Open in IMG/M
3300031573\|Ga0310915_10552208	All Organisms → cellular organisms → Bacteria → Terrabacteria group	817	Open in IMG/M
3300031640\|Ga0318555_10037444	All Organisms → cellular organisms → Bacteria	2400	Open in IMG/M
3300031668\|Ga0318542_10264784	All Organisms → cellular organisms → Bacteria → Terrabacteria group	876	Open in IMG/M
3300031681\|Ga0318572_10056337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2130	Open in IMG/M
3300031708\|Ga0310686_113098012	All Organisms → cellular organisms → Bacteria → Terrabacteria group	819	Open in IMG/M
3300031713\|Ga0318496_10054606	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2074	Open in IMG/M
3300031713\|Ga0318496_10456458	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300031713\|Ga0318496_10811535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300031719\|Ga0306917_10211321	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1473	Open in IMG/M
3300031740\|Ga0307468_100301823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1163	Open in IMG/M
3300031764\|Ga0318535_10091009	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1328	Open in IMG/M
3300031765\|Ga0318554_10112924	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1531	Open in IMG/M
3300031770\|Ga0318521_10144608	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1346	Open in IMG/M
3300031771\|Ga0318546_10033962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3062	Open in IMG/M
3300031778\|Ga0318498_10223476	All Organisms → cellular organisms → Bacteria → Terrabacteria group	851	Open in IMG/M
3300031780\|Ga0318508_1014558	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1833	Open in IMG/M
3300031793\|Ga0318548_10051000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1890	Open in IMG/M
3300031805\|Ga0318497_10207205	Not Available	1084	Open in IMG/M
3300031821\|Ga0318567_10292135	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300031835\|Ga0318517_10417156	Not Available	606	Open in IMG/M
3300031846\|Ga0318512_10024674	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2522	Open in IMG/M
3300031846\|Ga0318512_10138452	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300031846\|Ga0318512_10376419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	712	Open in IMG/M
3300031860\|Ga0318495_10040615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2048	Open in IMG/M
3300031860\|Ga0318495_10487302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300031879\|Ga0306919_10196199	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1498	Open in IMG/M
3300031879\|Ga0306919_11011078	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300031890\|Ga0306925_10362025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1557	Open in IMG/M
3300031890\|Ga0306925_10984389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	861	Open in IMG/M
3300031910\|Ga0306923_10131206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2850	Open in IMG/M
3300031910\|Ga0306923_10246082	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2045	Open in IMG/M
3300031942\|Ga0310916_10416376	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1144	Open in IMG/M
3300031942\|Ga0310916_10436646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1115	Open in IMG/M
3300031942\|Ga0310916_11226535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300031946\|Ga0310910_10761576	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300031954\|Ga0306926_10442720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1601	Open in IMG/M
3300032001\|Ga0306922_12251680	All Organisms → cellular organisms → Bacteria → Terrabacteria group	524	Open in IMG/M
3300032009\|Ga0318563_10523533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300032010\|Ga0318569_10454201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300032025\|Ga0318507_10042513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1755	Open in IMG/M
3300032044\|Ga0318558_10649628	All Organisms → cellular organisms → Bacteria → Terrabacteria group	527	Open in IMG/M
3300032059\|Ga0318533_11361650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300032063\|Ga0318504_10551533	Not Available	553	Open in IMG/M
3300032064\|Ga0318510_10074605	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1250	Open in IMG/M
3300032066\|Ga0318514_10308774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	836	Open in IMG/M
3300032076\|Ga0306924_10013901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8371	Open in IMG/M
3300032089\|Ga0318525_10115517	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1371	Open in IMG/M
3300032090\|Ga0318518_10040580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2176	Open in IMG/M
3300032261\|Ga0306920_101035751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1193	Open in IMG/M
3300032261\|Ga0306920_102078448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	793	Open in IMG/M
3300032770\|Ga0335085_10085148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4134	Open in IMG/M
3300032783\|Ga0335079_10887645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	917	Open in IMG/M
3300032895\|Ga0335074_11493691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300033289\|Ga0310914_10477502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1128	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.45%
Host-Associated	Host-Associated	6.92%
Engineered	Engineered	0.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.57%
Plants	Host-Associated → Plants	6.92%
Aquatic	Environmental → Aquatic	1.89%
Modeled	Engineered → Modeled	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.52%
Freshwater	Environmental → Aquatic → Freshwater	0.63%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.63%
Sediment	Environmental → Aquatic → Sediment	0.63%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.21%
Loam	Environmental → Terrestrial → Soil → Loam	11.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.40%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.89%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.63%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.63%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.28%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.89%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.26%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.63%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.63%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.06%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.29%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.52%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.52%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.26%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.26%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.63%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.63%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.63%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.63%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.63%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0522.00005700	2166559005	Simulated	TPASPGTPADHAGSVLCRLLIAHPEVVDIEILGQLDLPEGIIYSLGVILPDGRELLIDVGDV
JGI10216J12902_1180557601	3300000956	Soil	EILGQLDLPDGVIIYSLGVKLPDGRELLVDVGDV*
Ga0066395_104022272	3300004633	Tropical Forest Soil	DHAGSVLCRLLISHPEVLDIEILGQLDLPDGVIIYSLGVKLPDGRELLIDVGDV*
Ga0066388_1030148642	3300005332	Tropical Forest Soil	LLISHPEVVDIEILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV*
Ga0008090_154636441	3300005363	Tropical Rainforest Soil	MSHPDVVDIEVLGQLDLPEGIIYSLGVFLPDGRELLIDVGD
Ga0008090_158234261	3300005363	Tropical Rainforest Soil	MSHPDVVDIEILGQLDLPEGIIYSLGVFLPDGRELLIDVGDV*
Ga0070709_102661271	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	PADHAGSVLCRLLIAHPEVIDIEILGQLDLPEGIIYSLGVTLPDGRELLIDVGDV*
Ga0070710_102157031	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VLCRLLIAHPEVIDIEILGQLDLPEGIIYSLGVTLPDGRELLIDVGDV*
Ga0070711_1007851521	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	HPEVVDIEILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV*
Ga0070679_1018331551	3300005530	Corn Rhizosphere	AHPEVIDIEILGQLDLPEGIIYSLGVTLPDGRELLIDVGDV*
Ga0066707_101949551	3300005556	Soil	AGSVLCRLLIAHPEVVDIEILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV*
Ga0066903_1001328764	3300005764	Tropical Forest Soil	MSHPDVVDIEVLGQLDLPEGIIYSLGVFLPDGRELLIDVGDV*
Ga0066903_1084990002	3300005764	Tropical Forest Soil	AAPTDHAGSVLCRLLISHPEVLDIEILGQLDLPDGVIIYSLGVKLPDGRELLIDVGDV*
Ga0068858_1024893641	3300005842	Switchgrass Rhizosphere	DHAGSVLCRLLIAHPEVIDIEILGQLDLPEGIIYSLGVTLPDGRELLIDVGDV*
Ga0081540_13250691	3300005983	Tabebuia Heterophylla Rhizosphere	EVIDIEILGQLDLPEGIIYSLGVTLPDGRELLIDVGDV*
Ga0070717_105149481	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	DIEIVGQAELSDGVITYSLGVMLPGGRELLVDVADV*
Ga0070716_1012644591	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	IEILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV*
Ga0066665_108723811	3300006796	Soil	CRLLIAHPEVVDIEILGQLDLPEGIIYSLGVVLPDGRELLIDVGDV*
Ga0075425_1009938851	3300006854	Populus Rhizosphere	VVDIEILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV*
Ga0075425_1027459062	3300006854	Populus Rhizosphere	GSVLCRLLIAHPEVIDIEILGQLDLPEGIIYSLGVTLPDGRELLIDVGDV*
Ga0075434_1001633904	3300006871	Populus Rhizosphere	LCRLLIAHPEVIDIEILGQLDLPEGIIYSLGVVLPGGRELLIDVGDV*
Ga0073928_107638301	3300006893	Iron-Sulfur Acid Spring	EVVSIEILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV*
Ga0075424_1002219341	3300006904	Populus Rhizosphere	VDIEILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV*
Ga0075436_1001445761	3300006914	Populus Rhizosphere	IAHPEVIDIEILGQLDLPEGIIYSLGVVLPGGRELLIDVGDV*
Ga0099830_100344061	3300009088	Vadose Zone Soil	LIGHPDVIDIEILGQTEIFEGTISYSLGVFLPGGRELY
Ga0114129_134146832	3300009147	Populus Rhizosphere	LLISHPEVIDIEILGQLDLPDGVIIYSLGVKLPDGRELLIDVGDV*
Ga0126374_109042381	3300009792	Tropical Forest Soil	EVVDIEILGQLDLPEGIIYSLGVILPGGRELLIDVGDV*
Ga0126380_100260962	3300010043	Tropical Forest Soil	MDHPEVVDIEILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV*
Ga0126380_117951232	3300010043	Tropical Forest Soil	CRLLISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLVDVGDV*
Ga0126384_116367491	3300010046	Tropical Forest Soil	MAHPEVIDIEILGQLDLPEGIIYSLGVVLPDGRELLIDVGDV*
Ga0126384_118697662	3300010046	Tropical Forest Soil	AGSVLCRLLIAHPEVVDIEILGQMDTSEGIIYSLGVILPDGRELLVDVGDV*
Ga0134082_105259781	3300010303	Grasslands Soil	AHPEVVDIEILGQLDLPEGIIYSLGVILPDGRELLIDVGDV*
Ga0134067_101906121	3300010321	Grasslands Soil	ADHAGSVLCRLLIAHPEVVDIEILGQLDLPEGIIYSLGVILPDGRELLIDVGDV*
Ga0134062_101805831	3300010337	Grasslands Soil	AGSVLCRLLIAHPEVVDIEILGQLDLPEGIIYSLGVTLPDGRELLIDVGDV*
Ga0126370_102579894	3300010358	Tropical Forest Soil	DIEILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV*
Ga0126370_104522772	3300010358	Tropical Forest Soil	LLISHPEVVDIEILGQLDLPEGDIIYSLGVKLPDGRELLIDVGDV*
Ga0126370_123895442	3300010358	Tropical Forest Soil	DIEILGQLDLPEGVIIYSLGVKLPDGRELLIDVGDV*
Ga0126372_103555091	3300010360	Tropical Forest Soil	QAPHADHAGSVLCRLLIAHPEVVDIEILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV*
Ga0126372_112585262	3300010360	Tropical Forest Soil	LMSHPEVVDIEILGQTDLTEGIIYSLGVILPGGRELLIDVGDV*
Ga0126372_126472712	3300010360	Tropical Forest Soil	LISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLIDVGDV*
Ga0126378_107988952	3300010361	Tropical Forest Soil	ISHPEVVDIEILGQLDLPEGIIYSLGVVLPDGRELLIDVGDV*
Ga0126378_125284662	3300010361	Tropical Forest Soil	LLISHPEVVDIEILGQLDLPEGIIYSLGVVLPDGRELLIDVGDV*
Ga0126377_124952692	3300010362	Tropical Forest Soil	APLADHAGSVLCRLLMDHPEVVDIEILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV*
Ga0126379_102087354	3300010366	Tropical Forest Soil	HAGSVLCRLLIAHPEVVDIEILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV*
Ga0126379_109405583	3300010366	Tropical Forest Soil	DHAGSVLCRLLIAHPEVVDIEILGQLDLPEGIIYSLGVTLPDGRELLIDVGDV*
Ga0126379_138863441	3300010366	Tropical Forest Soil	PADHAGSVLCRLLIAHPEVVDIEILGQMDTSEGIIYSLGVLLPDGRELLVDVGDV*
Ga0134125_100956921	3300010371	Terrestrial Soil	LPADHAGSVLCRLLIAHPEVIDIEILGQLDLPEGIIYSLGVTLPDGRELLIDVGDV*
Ga0134125_110565061	3300010371	Terrestrial Soil	GSVLCRLLIAHPEVIDIEILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV*
Ga0126381_1008875373	3300010376	Tropical Forest Soil	GSVLCRLLMAHPQVVDIEIVGQAELSDGVITYSLGVVLPGGRELLVDVADV*
Ga0126381_1021681991	3300010376	Tropical Forest Soil	AHPEVIDIEILGQLDLPEGIIYSLGVVLPDGRELLIDVGDV*
Ga0134121_100378031	3300010401	Terrestrial Soil	HPEVIDIEILGQLDLPEGIIYSLGVTLPDGRELLIDVGDV*
Ga0134121_132674121	3300010401	Terrestrial Soil	ADHAGSVLCRLLIAHPEVVDIEILGQLDLPEGIIYSLGVVLPDGRELLIDVGDV*
Ga0137383_105275941	3300012199	Vadose Zone Soil	PEVADIAVLRQLDLTGGISSSLGVVLAAGRELLIDVGDV*
Ga0137399_107344733	3300012203	Vadose Zone Soil	VLCRLLIAHPEVVDIEILGQLDLPEGIIYSLGVILPDGRELLIDVGDV*
Ga0137372_101068133	3300012350	Vadose Zone Soil	HAGSVLCRLLIGHPEVVDIEILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV*
Ga0137390_100749726	3300012363	Vadose Zone Soil	LIGHPDVIDIEILGQTEIFEGTISYSLGVFLPGGRELYIDVEDA
Ga0137410_106839473	3300012944	Vadose Zone Soil	VVDIEILGQLDLPEGIIYSLGVILPDGRELLIDVGDV*
Ga0164298_109328052	3300012955	Soil	DIEILGQLDLPEGIIYSLGVTLPDGRELLIDVGDV*
Ga0126369_104176054	3300012971	Tropical Forest Soil	RLLIAHPEVVDIEILGQLDLPEGIIYSLGVTLPDGRELLIDVGDV*
Ga0157377_109784981	3300014745	Miscanthus Rhizosphere	RLLIAHPEVIDIEILGQLDLPEGIIYSLGVTLPDGRELLIDVGDV*
Ga0137411_11177943	3300015052	Vadose Zone Soil	VDIEILGQLDLPEGIIYSLGVILPDGRELLIDVGDV*
Ga0132258_106884961	3300015371	Arabidopsis Rhizosphere	HAGSVLCRLLIAHPEVIDIEILGQLDLPEGIIYSLGVTLPDGRELLIDVGDV*
Ga0182041_103008482	3300016294	Soil	LLISHPEVVDIEILGQLDLPEGVIIYSLGVKLPDGRELLVDVGDV
Ga0182041_120202571	3300016294	Soil	AAPTDHAGTVLCRLLISHPEVVDIEILGQLDLPDGAIIYSLGVKLPDGRELLIDVGDV
Ga0182032_100306181	3300016357	Soil	SMRGAAPTDHAGSVLCRLLISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLIDVGDV
Ga0187807_13136561	3300017926	Freshwater Sediment	LCRLLIAHPEVVDIEILGQMDTSEGIIYSLGVILPDGRELLVDVGDV
Ga0187779_111260481	3300017959	Tropical Peatland	HPDVVDIEVLGQLDLPEGIIYSLGVMLPDGRELLIDVGDV
Ga0187766_104317432	3300018058	Tropical Peatland	PDVVDIEILGQLDLPEGIIYSLGVFLPDGRELLIDVGYV
Ga0187765_100432295	3300018060	Tropical Peatland	DHAGSVLCRLLMSHPDVVDIEILGQLDLPEGIIYSLGVFLPDGRELLIDVGDI
Ga0187765_111927402	3300018060	Tropical Peatland	IDIEILGQLDLPEGIIYSLGVILPGGRELLIDVGDV
Ga0193729_10404382	3300019887	Soil	VLCRLLISHPEVVDIEIVGQTEMSNGTISYSLGVMLPGGRELFVDVEDA
Ga0210387_106548851	3300021405	Soil	PEVVDIEILGQMDTSEGIIYSLGVILPDGRELLVDVGDV
Ga0210398_102992153	3300021477	Soil	KRKPASADHAGSVLCRLLIGHPEVVDIEILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV
Ga0208078_11281871	3300025544	Arctic Peat Soil	LCRLLARHPEVVDIEMLGQTEMADGTISYSLGVVLPDGRELFIDVEDA
Ga0207692_100276771	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VLCRLLIAHPEVIDIEILGQLDLPEGIIYSLGVTLPDGRELLIDVGDV
Ga0207692_100361401	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LLISHPEVVDIEIVGQTEMSNGAISYSLGVMLPDGRELFVDVEDASMAG
Ga0207699_113162022	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LCRLLIAHPEVVDIEILGQLDTSEGIIYSLGVILPDGRELLVDVGDV
Ga0207663_100437984	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LIAHPEVIDIEILGQLDLPEGIIYSLGVTLPDGRELLIDVGDV
Ga0207652_114469121	3300025921	Corn Rhizosphere	AHPEVIDIEILGQLDLPEGIIYSLGVTLPDGRELLIDVGDV
Ga0207700_102517691	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	EVVDIEILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV
Ga0207702_119945861	3300026078	Corn Rhizosphere	LLIAHPEVVDIEILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV
Ga0209648_106501902	3300026551	Grasslands Soil	ADHAGSLLCRLLISHPEVVDIEILGQLDTTEGIIYSLGVILPDGRELLVDVGDV
Ga0209466_10102771	3300027646	Tropical Forest Soil	VVDIEILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV
Ga0209177_103622591	3300027775	Agricultural Soil	HPEVVDIEILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV
Ga0209465_103190292	3300027874	Tropical Forest Soil	PTDHAGSVLCRLLISHPEVLDIEILGQLDLPDGVIIYSLGVKLPDGRELLIDVGDV
Ga0209465_104035341	3300027874	Tropical Forest Soil	VLCRLLISHPEVVDIEILGQLDLPEGVIIYSLGVKLPDGRELLIDVGDV
Ga0209067_101960302	3300027898	Watersheds	VLSRLLFSHPEVVGIELLGQADFGEGIVYSLGVILPDGRELLVDVGDV
Ga0307308_104357892	3300028884	Soil	SVLCRLLIAHPEVIDIEILGQLDLPEGIIYSLGVVLPGGRELLIDVGDV
Ga0265460_124107802	3300030740	Soil	DIVILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV
Ga0318516_100444113	3300031543	Soil	LISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLVDVGDV
Ga0318516_101411521	3300031543	Soil	ARPDHAGSVLCRLLMSHPDVVDIEVLGQLDLPEGIIYSLGVFLPDGRELLIDVGDV
Ga0318516_101766792	3300031543	Soil	APADHAGSVLCRLLISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLIDVGDV
Ga0318541_101083001	3300031545	Soil	AGSVLCRLLISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLIDVGDV
Ga0318538_100359821	3300031546	Soil	GAAPADHAGSVLCRLLISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLIDVGDV
Ga0318538_100605283	3300031546	Soil	GSVLCRLLIAHPEVVDIEILGQLDLPDGIIYSLGVKLPDGRELLIDVGDV
Ga0318538_101411341	3300031546	Soil	VLCRLLMSHPDVVDIEVLGQLDLPEGIIYSLGVFLPDGRELLIDVGDV
Ga0318571_100715052	3300031549	Soil	GSVLCRLLISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLVDVGDV
Ga0318571_103865643	3300031549	Soil	VVDIEILGQLDLPDGVIIYSLGVKLPDGRELLIDVGDV
Ga0318528_102633601	3300031561	Soil	DVVDIEVLGQLDLPEGIIYSLGVFLPDGRELLIDVGDV
Ga0318573_100566592	3300031564	Soil	MSHPDVVDIEVLGQLDLPEGIIYSLGVFLPDGRELLIDVGDV
Ga0318573_100783952	3300031564	Soil	RLLISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLVDVGDV
Ga0318515_100418241	3300031572	Soil	LISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLIDVGDV
Ga0318515_107249032	3300031572	Soil	CRLLMSHPDVVDIEVLGQLDLPEGIIYSLGVFLPDGRELLIDVGDV
Ga0310915_104108851	3300031573	Soil	LCRLLISHPEVVDIEILGQLDLPDGDIIYSLGVKLPDGRELLIDVGDV
Ga0310915_105522082	3300031573	Soil	ISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLIDVGDV
Ga0318555_100374441	3300031640	Soil	DIEILGQLDLPDGVIIYSLGVKLPDGRELLVDVGDV
Ga0318542_102647841	3300031668	Soil	ADHAGSVLCRLLISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLVDVGDV
Ga0318572_100563371	3300031681	Soil	DIEILGQLDLPDGIIYSLGVKLPDGRELLIDVGDV
Ga0310686_1130980122	3300031708	Soil	GSVLCRLLIGHPEVVDIEILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV
Ga0318496_100546061	3300031713	Soil	LLISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLVDVGDV
Ga0318496_104564581	3300031713	Soil	LCRLLISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLIDVGDV
Ga0318496_108115351	3300031713	Soil	LMSHPDVVDIEVLGQLDLPEGIIYSLGVFLPDGRELLIDVGDV
Ga0306917_102113212	3300031719	Soil	LLISHPEVVDIEILGQLDLPDGDIIYSLGVKLPDGRELLIDVGDV
Ga0307468_1003018234	3300031740	Hardwood Forest Soil	DIEILGQLDLPEGIIYSLGVTLPDGRELLIDVGDI
Ga0318535_100910091	3300031764	Soil	LLCRLLISHPEVVGIELLGQADFGEGIVYSLGVMLPDGRELLVDVGDVLRPAPGAAFG
Ga0318554_101129242	3300031765	Soil	HPEVVDIEILGQLDLPDGDIIYSLGVKLPDGRELLIDVGDV
Ga0318521_101446082	3300031770	Soil	GAAPADHAGSVLCRLLISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLVDVGDV
Ga0318546_100339621	3300031771	Soil	APTDHAGSVLCRLLISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLIDVGDV
Ga0318498_102234761	3300031778	Soil	TRGAAPADHAGSVLCRLLISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLIDVGD
Ga0318508_10145581	3300031780	Soil	LCRLLISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLVDVGDV
Ga0318548_100510001	3300031793	Soil	SHPDVVDIEVLGQLDLPEGIIYSLGVFLPDGRELLIDVGDV
Ga0318497_102072051	3300031805	Soil	VDIEVLGQLDLPEGIIYSLGVFLPDGRELLIDVGDV
Ga0318567_102921351	3300031821	Soil	RLLISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLIDVGDV
Ga0318517_104171561	3300031835	Soil	AGSVLCRLLIAHPEVVDIEILGQLDLPDGIIYSLGVKLPDGRELLIDVGDV
Ga0318512_100246741	3300031846	Soil	CRLLISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLVDVGDV
Ga0318512_101384521	3300031846	Soil	VLCRLLISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLIDVGDV
Ga0318512_103764192	3300031846	Soil	HAGSVLCRLLIAHPEVIDIEILGQLDLPEGIIYSLGVFLPDGRELLIDVGDV
Ga0318495_100406152	3300031860	Soil	LLISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLIDVGDV
Ga0318495_104873022	3300031860	Soil	MSHPDVVDIEVLGQLDLPEGIIYSLGVFLPDGREL
Ga0306919_101961992	3300031879	Soil	AGSVLCRLLISHPEVVDIEILGQLDLPDGDIIYSLGVKLPDGRELLIDVGDV
Ga0306919_110110783	3300031879	Soil	SVLCRLLISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLIDVGDV
Ga0306925_103620253	3300031890	Soil	CRLLIGHPEVVDIEILGQLDLPDGIIYSLGVKLPDGRELLIDVGDV
Ga0306925_109843892	3300031890	Soil	LLCRLLISHPEVVGIELLGQADFGEGIVYSLGVILPDGRELL
Ga0306923_101312061	3300031910	Soil	TRGAAPADHAGSVLCRLLISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLVDVGD
Ga0306923_102460822	3300031910	Soil	PEVVDIEILGQLDLPEGIIYSLGVVLPDGRELLIDVGDV
Ga0306923_104865731	3300031910	Soil	AARPDHAGSVLCRLLMSHPDVVDIEVLGQLDLPEGIIYSLGVFLPDGRELLIDVGDV
Ga0310916_104163762	3300031942	Soil	TPADHAGSVLCRLLIAHPEVVDIEILGQMDTTEGIIYSLGVMLPDGRELLVDVGDV
Ga0310916_104366461	3300031942	Soil	DHAGSVLCRLLIAHPEVIDIEILGQLDLPEGIIYSLGVTLPDGRELLIDVGDV
Ga0310916_112265351	3300031942	Soil	AGSVLCRLLMSHPDVVDIEVLGQLDLPEGIIYSLGVFLPDGRELLIDVGDV
Ga0310910_107615763	3300031946	Soil	SHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLIDVGDV
Ga0306926_104427201	3300031954	Soil	MRGAAPTDHAGSVLCRLLISHPEVVDIEILGQLDLPDGDIIYSLGVKLPDGRELLIDVGD
Ga0306922_122516802	3300032001	Soil	DIEILGQLDLPEGIIYSLGVMLPDGRELLIDVGDV
Ga0318563_105235331	3300032009	Soil	VLCRLLLSHPDVVDIEVLGQLDLPEGIIYSLGVFLPDGRELLIDVGDV
Ga0318569_104542011	3300032010	Soil	LLMSHPDVVDIEVLGQLDLPEGIIYSLGVFLPDGRELLIDVGDV
Ga0318507_100425133	3300032025	Soil	PDVVDIEVLGQLDLPEGIIYSLGVFLPDGRELLIDVGDV
Ga0318558_106496282	3300032044	Soil	RGAAPTDHAGTVLCRLLISHPEVVDIEILGQLDLPDGAIIYSLGVKLPDGRELLIDVGDV
Ga0318533_113616503	3300032059	Soil	DHAGSVLCRLLISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLIDVGDV
Ga0318504_105515332	3300032063	Soil	EVVDIEILGQLDLPDGIIYSLGVKLPDGRELLIDVGDV
Ga0318510_100746051	3300032064	Soil	AGSVLCRLLISHPEVVDIEILGQLDLPEGIIYSLGVVLPDGRELLIDVGDV
Ga0318514_103087742	3300032066	Soil	VVDIEVLGQLDLPEGIIYSLGVFLPDGRELLIDVGDV
Ga0306924_100139011	3300032076	Soil	SVLCRLLIAHPEVVDIEILGQLDLPDGIIYSLGVKLPDGRELLIDVGDV
Ga0318525_101155172	3300032089	Soil	HAGSVLCRLLISHPEVVDIEILGQLDLPDGVIIYSLGVKLPDGRELLVDVGDV
Ga0318518_100405801	3300032090	Soil	VVDIEILGQLDLPDGVIIYSLGVKLPDGRELLVDVGDV
Ga0306920_1010357511	3300032261	Soil	PDHAGSVLCRLLMSHPDVVDIEVLGQLDLPEGIIYSLGVFLPDGRELLIDVGDV
Ga0306920_1020784481	3300032261	Soil	RLLIAHPEVIDIEILGQLDLPEGIIYSLGVTLPDGRELLIDVGDV
Ga0335085_100851484	3300032770	Soil	GSVLCRLLIAHPEVIDIEILGQLDLPEGIIYSLGVTLPDGRELLIDVGDV
Ga0335079_108876451	3300032783	Soil	AGSVLCRLLIAHPEVIDIEILGQLDLPEGIIYSLGVILPGGRELLIDVGDV
Ga0335074_114936911	3300032895	Soil	MVEYDRDHAGSVLCRLLIAHPEVAGIELLGQADLDDGIVYSLGVILPGGRELLVDVSDV
Ga0310914_104775024	3300033289	Soil	CRLLIAHPEVIDIEILGQLDLPEGIIYSLGVTLPDGRELLIDVGDV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041950

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences