Metagenome / Metatranscriptome Family F041999

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041999
Family Type	Metagenome / Metatranscriptome
Number of Sequences	159
Average Sequence Length	96 residues
Representative Sequence	MLEDACLLNDTSFLPNLFDVDAVLLARGTNQVRGRPAIANVIIEQLRDGGSYVAAPQLVMQSGPLALIISDAAISVARRSLDGWHYVISRLDL
Number of Associated Samples	93
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	56.96 %
% of genes near scaffold ends (potentially truncated)	40.25 %
% of genes from short scaffolds (< 2000 bps)	79.87 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.296 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (26.415 % of family members)
Environment Ontology (ENVO)	Unclassified (27.044 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.170 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.83% β-sheet: 27.27% Coil/Unstructured: 52.89%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF07883	Cupin_2	28.30
PF04193	PQ-loop	4.40
PF13561	adh_short_C2	1.26
PF01175	Urocanase	1.26
PF08240	ADH_N	1.26
PF00106	adh_short	0.63
PF13191	AAA_16	0.63
PF10861	DUF2784	0.63
PF00201	UDPGT	0.63
PF00196	GerE	0.63
PF03795	YCII	0.63
PF02909	TetR_C_1	0.63
PF13474	SnoaL_3	0.63
PF04430	DUF498	0.63
PF01042	Ribonuc_L-PSP	0.63
PF12728	HTH_17	0.63
PF12146	Hydrolase_4	0.63
PF03069	FmdA_AmdA	0.63
PF08031	BBE	0.63
PF05991	NYN_YacP	0.63
PF00753	Lactamase_B	0.63
PF08241	Methyltransf_11	0.63
PF06187	DUF993	0.63
PF13542	HTH_Tnp_ISL3	0.63
PF13577	SnoaL_4	0.63
PF06772	LtrA	0.63
PF02515	CoA_transf_3	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG1819	UDP:flavonoid glycosyltransferase YjiC, YdhE family	Carbohydrate transport and metabolism [G]	1.26
COG2987	Urocanate hydratase	Amino acid transport and metabolism [E]	1.26
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.63
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.63
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.63
COG1504	Uncharacterized conserved protein, DUF498 domain	Function unknown [S]	0.63
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.63
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.63
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.63
COG3688	EndoRNase involved in mRNA decay, NYN (Nedd4-BP1/Rae1/YacP nuclease) family, contains PIN domain	Translation, ribosomal structure and biogenesis [J]	0.63
COG3737	Uncharacterized protein, contains Mth938-like domain	Function unknown [S]	0.63
COG4292	Low temperature requirement protein LtrA (function unknown)	Function unknown [S]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.30 %
Unclassified	root	N/A	32.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.30 %
Unclassified	root	N/A	32.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.30 %
Unclassified	root	N/A	32.70 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	58.49 %
Unclassified	root	N/A	32.70 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	38.99 %
Unclassified	root	N/A	32.70 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.63 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20.75 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.63 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.70 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.26 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
Kineosporiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales	0.63 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.63 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.63 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.70 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.26 %
Leptolyngbyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae	0.63 %
Kineosporiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.63 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.70 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.26 %
Kineococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus	0.63 %
Leptolyngbya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.63 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.70 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.26 %
Kineococcus siccus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus → Kineococcus siccus	0.63 %
Leptolyngbya ohadii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → Leptolyngbya ohadii	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.63 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_2709_length_1624_cov_7.046182	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1656	Open in IMG/M
2228664021\|ICCgaii200_c0060536	Not Available	510	Open in IMG/M
2228664021\|ICCgaii200_c0815167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1835	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0842835	All Organisms → cellular organisms → Bacteria	3960	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11213302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538	Open in IMG/M
3300000559\|F14TC_103110431	Not Available	593	Open in IMG/M
3300000787\|JGI11643J11755_11570625	Not Available	796	Open in IMG/M
3300000858\|JGI10213J12805_10049713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	601	Open in IMG/M
3300000858\|JGI10213J12805_10852960	Not Available	814	Open in IMG/M
3300000956\|JGI10216J12902_106126571	Not Available	704	Open in IMG/M
3300000956\|JGI10216J12902_115506749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	613	Open in IMG/M
3300004463\|Ga0063356_100135426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2770	Open in IMG/M
3300004463\|Ga0063356_103120720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	714	Open in IMG/M
3300004463\|Ga0063356_103579190	Not Available	669	Open in IMG/M
3300004479\|Ga0062595_100936342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	735	Open in IMG/M
3300005937\|Ga0081455_10069204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2936	Open in IMG/M
3300006169\|Ga0082029_1770156	All Organisms → cellular organisms → Bacteria → Terrabacteria group	835	Open in IMG/M
3300006844\|Ga0075428_100307360	All Organisms → cellular organisms → Bacteria	1704	Open in IMG/M
3300006846\|Ga0075430_100640262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	877	Open in IMG/M
3300006918\|Ga0079216_10319908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	929	Open in IMG/M
3300007004\|Ga0079218_10051783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2556	Open in IMG/M
3300009100\|Ga0075418_12103514	Not Available	615	Open in IMG/M
3300009146\|Ga0105091_10158152	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1065	Open in IMG/M
3300009156\|Ga0111538_14087453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504	Open in IMG/M
3300009789\|Ga0126307_10022708	All Organisms → cellular organisms → Bacteria	4755	Open in IMG/M
3300009789\|Ga0126307_10228413	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1495	Open in IMG/M
3300009789\|Ga0126307_10306547	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1277	Open in IMG/M
3300009789\|Ga0126307_10741058	Not Available	793	Open in IMG/M
3300009789\|Ga0126307_10796831	Not Available	763	Open in IMG/M
3300009789\|Ga0126307_10874446	Not Available	726	Open in IMG/M
3300009789\|Ga0126307_11782939	Not Available	501	Open in IMG/M
3300009840\|Ga0126313_10082668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2330	Open in IMG/M
3300009840\|Ga0126313_10303208	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1250	Open in IMG/M
3300009840\|Ga0126313_10482899	Not Available	991	Open in IMG/M
3300009840\|Ga0126313_10533183	All Organisms → cellular organisms → Bacteria → Terrabacteria group	942	Open in IMG/M
3300009840\|Ga0126313_10554507	All Organisms → cellular organisms → Bacteria → Terrabacteria group	923	Open in IMG/M
3300009840\|Ga0126313_11051634	Not Available	668	Open in IMG/M
3300010036\|Ga0126305_10225282	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1197	Open in IMG/M
3300010036\|Ga0126305_10770860	All Organisms → cellular organisms → Bacteria → Terrabacteria group	653	Open in IMG/M
3300010036\|Ga0126305_10780548	Not Available	649	Open in IMG/M
3300010037\|Ga0126304_10743650	All Organisms → cellular organisms → Bacteria → Terrabacteria group	664	Open in IMG/M
3300010037\|Ga0126304_10985060	Not Available	574	Open in IMG/M
3300010038\|Ga0126315_10542441	All Organisms → cellular organisms → Bacteria → Terrabacteria group	746	Open in IMG/M
3300010038\|Ga0126315_10584330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	720	Open in IMG/M
3300010039\|Ga0126309_10010126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3844	Open in IMG/M
3300010039\|Ga0126309_10485190	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300010040\|Ga0126308_10471467	Not Available	845	Open in IMG/M
3300010040\|Ga0126308_11189984	Not Available	539	Open in IMG/M
3300010040\|Ga0126308_11227896	Not Available	531	Open in IMG/M
3300010041\|Ga0126312_10043113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3016	Open in IMG/M
3300010041\|Ga0126312_10232012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1294	Open in IMG/M
3300010041\|Ga0126312_10233662	Not Available	1289	Open in IMG/M
3300010042\|Ga0126314_10086920	Not Available	2104	Open in IMG/M
3300010042\|Ga0126314_10428545	All Organisms → cellular organisms → Bacteria → Terrabacteria group	955	Open in IMG/M
3300010044\|Ga0126310_10239099	Not Available	1218	Open in IMG/M
3300010044\|Ga0126310_10933501	All Organisms → cellular organisms → Bacteria → Terrabacteria group	678	Open in IMG/M
3300010045\|Ga0126311_10204630	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300010045\|Ga0126311_10575103	Not Available	890	Open in IMG/M
3300010045\|Ga0126311_10894820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	720	Open in IMG/M
3300010166\|Ga0126306_10091932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2178	Open in IMG/M
3300010166\|Ga0126306_10127655	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1868	Open in IMG/M
3300010166\|Ga0126306_10763162	Not Available	778	Open in IMG/M
3300010166\|Ga0126306_10805268	Not Available	758	Open in IMG/M
3300010166\|Ga0126306_11219549	Not Available	619	Open in IMG/M
3300010166\|Ga0126306_11505385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	559	Open in IMG/M
3300011000\|Ga0138513_100063063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300012937\|Ga0162653_100020605	Not Available	886	Open in IMG/M
3300012938\|Ga0162651_100001295	Not Available	2148	Open in IMG/M
3300012938\|Ga0162651_100065957	Not Available	590	Open in IMG/M
3300012939\|Ga0162650_100000268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4299	Open in IMG/M
3300012939\|Ga0162650_100003623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1700	Open in IMG/M
3300012941\|Ga0162652_100096211	Not Available	527	Open in IMG/M
3300015077\|Ga0173483_10016186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2590	Open in IMG/M
3300015371\|Ga0132258_10073642	All Organisms → cellular organisms → Bacteria	7931	Open in IMG/M
3300017965\|Ga0190266_10171079	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1003	Open in IMG/M
3300017965\|Ga0190266_10462477	Not Available	726	Open in IMG/M
3300018028\|Ga0184608_10001731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6457	Open in IMG/M
3300018028\|Ga0184608_10413695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	584	Open in IMG/M
3300018031\|Ga0184634_10488214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	551	Open in IMG/M
3300018051\|Ga0184620_10004498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2863	Open in IMG/M
3300018054\|Ga0184621_10100080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1024	Open in IMG/M
3300018066\|Ga0184617_1149867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	682	Open in IMG/M
3300018072\|Ga0184635_10271287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	670	Open in IMG/M
3300018073\|Ga0184624_10017747	All Organisms → cellular organisms → Bacteria	2608	Open in IMG/M
3300018075\|Ga0184632_10230137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	813	Open in IMG/M
3300018081\|Ga0184625_10067040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1819	Open in IMG/M
3300018081\|Ga0184625_10146200	Not Available	1234	Open in IMG/M
3300018081\|Ga0184625_10484596	All Organisms → cellular organisms → Bacteria → Terrabacteria group	628	Open in IMG/M
3300018432\|Ga0190275_12514811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus → Kineococcus siccus	592	Open in IMG/M
3300018465\|Ga0190269_10430089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	829	Open in IMG/M
3300018465\|Ga0190269_10594923	All Organisms → cellular organisms → Bacteria → Terrabacteria group	746	Open in IMG/M
3300018466\|Ga0190268_10041654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1741	Open in IMG/M
3300018466\|Ga0190268_10435662	Not Available	860	Open in IMG/M
3300018466\|Ga0190268_10539680	All Organisms → cellular organisms → Bacteria → Terrabacteria group	806	Open in IMG/M
3300018466\|Ga0190268_11024052	Not Available	661	Open in IMG/M
3300018466\|Ga0190268_11412213	Not Available	597	Open in IMG/M
3300018469\|Ga0190270_10109330	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2142	Open in IMG/M
3300018469\|Ga0190270_11247104	Not Available	784	Open in IMG/M
3300018469\|Ga0190270_11523366	Not Available	718	Open in IMG/M
3300018476\|Ga0190274_10493162	Not Available	1222	Open in IMG/M
3300018476\|Ga0190274_10788934	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1006	Open in IMG/M
3300019233\|Ga0184645_1278228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	780	Open in IMG/M
3300019269\|Ga0184644_1569977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	766	Open in IMG/M
3300019356\|Ga0173481_10377889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	686	Open in IMG/M
3300019767\|Ga0190267_10322718	Not Available	815	Open in IMG/M
3300019767\|Ga0190267_10393514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → Leptolyngbya ohadii	769	Open in IMG/M
3300019767\|Ga0190267_10429216	Not Available	751	Open in IMG/M
3300019767\|Ga0190267_11064999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	576	Open in IMG/M
3300019867\|Ga0193704_1009476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1952	Open in IMG/M
3300019876\|Ga0193703_1011029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1356	Open in IMG/M
3300020005\|Ga0193697_1014179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1954	Open in IMG/M
3300020020\|Ga0193738_1027788	Not Available	1763	Open in IMG/M
3300020020\|Ga0193738_1033724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1582	Open in IMG/M
3300022195\|Ga0222625_1817104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	991	Open in IMG/M
3300026118\|Ga0207675_102429434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	536	Open in IMG/M
3300027886\|Ga0209486_10604834	All Organisms → cellular organisms → Bacteria → Terrabacteria group	696	Open in IMG/M
3300028589\|Ga0247818_11420899	Not Available	501	Open in IMG/M
3300028707\|Ga0307291_1003233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3511	Open in IMG/M
3300028710\|Ga0307322_10017868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1616	Open in IMG/M
3300028711\|Ga0307293_10070658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1097	Open in IMG/M
3300028718\|Ga0307307_10029106	All Organisms → cellular organisms → Bacteria	1561	Open in IMG/M
3300028719\|Ga0307301_10112460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	867	Open in IMG/M
3300028744\|Ga0307318_10021228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2093	Open in IMG/M
3300028768\|Ga0307280_10007562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2870	Open in IMG/M
3300028771\|Ga0307320_10174945	Not Available	835	Open in IMG/M
3300028796\|Ga0307287_10098753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1101	Open in IMG/M
3300028799\|Ga0307284_10162214	Not Available	867	Open in IMG/M
3300028810\|Ga0307294_10000233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13632	Open in IMG/M
3300028814\|Ga0307302_10048783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1969	Open in IMG/M
3300028828\|Ga0307312_10089046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1899	Open in IMG/M
3300028878\|Ga0307278_10019164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	3169	Open in IMG/M
3300028878\|Ga0307278_10039514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2148	Open in IMG/M
3300030496\|Ga0268240_10001799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2635	Open in IMG/M
3300031091\|Ga0308201_10364133	Not Available	534	Open in IMG/M
3300031548\|Ga0307408_100022646	All Organisms → cellular organisms → Bacteria	4271	Open in IMG/M
3300031548\|Ga0307408_100064383	All Organisms → cellular organisms → Bacteria	2685	Open in IMG/M
3300031548\|Ga0307408_100204017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1602	Open in IMG/M
3300031548\|Ga0307408_100331291	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1286	Open in IMG/M
3300031731\|Ga0307405_10095372	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1981	Open in IMG/M
3300031731\|Ga0307405_10492196	All Organisms → cellular organisms → Bacteria → Terrabacteria group	981	Open in IMG/M
3300031824\|Ga0307413_10187212	Not Available	1482	Open in IMG/M
3300031824\|Ga0307413_10404672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1070	Open in IMG/M
3300031824\|Ga0307413_11523791	Not Available	592	Open in IMG/M
3300031852\|Ga0307410_10380791	Not Available	1135	Open in IMG/M
3300031852\|Ga0307410_10607901	All Organisms → cellular organisms → Bacteria → Terrabacteria group	912	Open in IMG/M
3300031852\|Ga0307410_11403332	All Organisms → cellular organisms → Bacteria → Terrabacteria group	613	Open in IMG/M
3300031901\|Ga0307406_10047725	All Organisms → cellular organisms → Bacteria	2700	Open in IMG/M
3300031903\|Ga0307407_10038172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2659	Open in IMG/M
3300031903\|Ga0307407_10701858	All Organisms → cellular organisms → Bacteria → Terrabacteria group	762	Open in IMG/M
3300031911\|Ga0307412_11712885	Not Available	576	Open in IMG/M
3300031995\|Ga0307409_100049300	All Organisms → cellular organisms → Bacteria	3210	Open in IMG/M
3300031995\|Ga0307409_101237546	Not Available	770	Open in IMG/M
3300031995\|Ga0307409_102447603	Not Available	551	Open in IMG/M
3300032002\|Ga0307416_100131192	All Organisms → cellular organisms → Bacteria	2256	Open in IMG/M
3300032004\|Ga0307414_10139881	All Organisms → cellular organisms → Bacteria	1893	Open in IMG/M
3300032005\|Ga0307411_10265745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1357	Open in IMG/M
3300032005\|Ga0307411_11120900	Not Available	710	Open in IMG/M
3300032126\|Ga0307415_100829631	All Organisms → cellular organisms → Bacteria → Terrabacteria group	846	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.99%
Host-Associated	Host-Associated	22.01%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.92%
Plants	Host-Associated → Plants	22.01%
Aquatic	Environmental → Aquatic	10.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.24%
Sediment	Environmental → Aquatic → Sediment	7.55%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	4.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.77%
Freshwater	Environmental → Aquatic → Freshwater	2.52%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.55%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	4.40%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.14%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.52%
Loam	Environmental → Terrestrial → Soil → Loam	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	53.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.29%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	4.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.14%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.52%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.63%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	26.42%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	25.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	15.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.29%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	4.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.52%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.63%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.63%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_02692090	2140918013	Soil	MLEDACLLSDASLLTSLFDDDAVLLSQATSQVRGRSAIAEVIIDHVRDGGNYVAAPQLVLQSGPLALIISGEATSVARRDPDGWHYVISRLDLSLAPNMPW
ICCgaii200_00605361	2228664021	Soil	TSLFDDDAVLLSQATSQVRGRSAIAEVIIDHVRDGGNYVAAPQLVLQSGPLALIISGEATSVARRDPDGWHYVISRLDLSLAPNMPW
ICCgaii200_08151673	2228664021	Soil	MPAGAASPEELEGMLEDACLLNDTSFLPNLFDVDAVLLARGTNQVRGRPAIANVIIEQLRDGGSYVAAPQLVMQSGPLALIISDAAISVARRSLDGWHYVISRLDL
ICChiseqgaiiDRAFT_08428353	3300000033	Soil	MPAGAASPEELEGMLEDACLLNDTSFLPNLFDVDAVLLARGTNQVRGRPAIANVIIEQLRDGGSYVAAPQLVMQSGPLALIISDAAISVARRSLDGWHYVISRLDL*
ICChiseqgaiiFebDRAFT_112133021	3300000363	Soil	MLEDACLLSDASVLMTLFDDDAILLTRATSQVHGRSATAEVIIGQLRRGGIYIAAPQVVMQSGRLALILSETATSVARRGPDGWHYVISYLDLSYSPA*
F14TC_1031104312	3300000559	Soil	MPAGAASPEELEGMLEDACLLSDTSLITSLFDDDAVLLTRATSQARGRPAIMKVIMNQLRNGGSYVGAPQLVMQSGQLALIISHAATLVARRGPDGWHYVISRLDL*
JGI11643J11755_115706253	3300000787	Soil	AGAASPEELEGMLEDACLLNDTSFLPNLFDVDAVLLARGTNQVRGRPAIANVIIEQLRDGGSYVAAPQLVMQSGPLALIISDAAISVARRSLDGWHYVIXRLDL*
JGI10213J12805_100497132	3300000858	Soil	MLEDACLLGDASLLANLFDVDAILLARGTSQVRGRPAIAKVIIDQLRDGGSYVGAPRLVMQSGQLALIISDAATSVARRSLDGWRYVISRLDL
JGI10213J12805_108529601	3300000858	Soil	GLFDHDAVLVTRATSQVRGRSAIANVIISQLRHGGSYIAAPQLVMQSGRLALIISDAATSLARRGPDGWHYVISRLDL*
JGI10216J12902_1061265711	3300000956	Soil	MLEDACLLNDTSFLHNLFDVDAVLLARGTSQVRGRPAIADVIIDQLRNGGSYVAAPQLMMQSGPLALIISGAAISVARRNLDGWQYVISRLDL*
JGI10216J12902_1155067492	3300000956	Soil	MLEDACLLGDAPFLANLFDVDAVLLTRGTSQLRGRTAIAKVIIDQLRDGGSYVGAPRLVMQSDQLALIISDAATSVARRNLDGWRYVISRLDL*
Ga0063356_1001354264	3300004463	Arabidopsis Thaliana Rhizosphere	MLEDACLLSDASVLMTLFDDDAILLTRATSQVHGRSATAEVIIGQLRRGGIYIAAPQVVMQSGRLALILSETATSVARRGPDGWHYVISRLDL*
Ga0063356_1031207202	3300004463	Arabidopsis Thaliana Rhizosphere	MLEDACLLSDASLITSLFDDDAVLLSGATSQVRGRSAVAEVIIDHLQHGGGYVAAPQLVMQSGPLALIISGGATSVAHRDQDGWHYVISRLDL*
Ga0063356_1035791902	3300004463	Arabidopsis Thaliana Rhizosphere	MLEDACLLSDASFLTSLFDDDAVVLTQARRHVRGRSAIAGMIIHDLRRGGSFVAAPELVMQSGRLALIISREATSVVRQGPDGWHYVVSCLDLS*
Ga0062595_1009363422	3300004479	Soil	MLEDACLLSDASLLTSLFDDDAVLLTRASSHVRGRSAIAEVIIDHVREGGNYVAVPELVMQSGRLALIISGEATSVARRSL
Ga0081455_100692042	3300005937	Tabebuia Heterophylla Rhizosphere	MLEDACLLGDASLITSLFDDDAVLLTLATSQARGRPAITKVIMSQLRYGGSYVGAPQLVLQSGQLALIISHAATSVARRGADGWHYVISRLDL*
Ga0082029_17701561	3300006169	Termite Nest	MLEDACLLNDTSFLPLLFDVDAVLLARGTNQVRGRPAIANVIIDQLRDGGSYVAAPNLVLQSGPLALIISANATSVAKRNLDGWHYVISRLDL*
Ga0075428_1003073602	3300006844	Populus Rhizosphere	MPAGAASPEELEGMLEDACLLTDTSFLPNLFDVEAVLLARGTSQVRGRAAITNVIIDQLRRGGSYVAAPQLVMQSGPLALIISDAAISVARRSLDGWHYVISRLDL*
Ga0075430_1006402622	3300006846	Populus Rhizosphere	VSAGATCPEELELLLEDACLLSDMSLLSTLFDDDAVLLTRATSQVRGRSAIAEVIINHVRGAGSYVAAPEVVMQSGRLALIISHTTTSVARRGPDGWHYVITRLDL*
Ga0079216_103199081	3300006918	Agricultural Soil	MLEDACLLTDRSVLPSLFEVDAVLLARGISQVHGRPAIAKVIIDQLRRGGSYVAAPQLVMQSGPLALIISGAAISVARRNLDGGHCVIS
Ga0079218_100517833	3300007004	Agricultural Soil	MPAGAASPEELEGMLEDACLLTDRSVLPSLFEVDAVLLARGISQVHGRPAIAKVMQSGPLALIISGAAISVARRNLDGWHYVISRLDL*
Ga0075418_121035141	3300009100	Populus Rhizosphere	FDVDAVLLARGRSQVRGRPAIANVIIGQLRDGGSYVASPNLVMQSGPLALIISANATSVARRSLDGWHYVISRLDL*
Ga0105091_101581522	3300009146	Freshwater Sediment	MPAGAASPEELEGMLEDACLLNDTSFLPNLFDVDAVLLARGTSQVRGRAAITSVIIDQLRDGGSYVAAPHLVLQSGPLALIISDAAISVARRSLDGWHYVISRLDL*
Ga0111538_140874532	3300009156	Populus Rhizosphere	VSAGATCPEELELLLEDACLLSDMSLLSTLFDDDAVLLTRATSQVRGRSAIAEVIINHVRGAGSYVAAPEVVMQSGRLALIISHTTTSVARRGPDGWH
Ga0126307_100227083	3300009789	Serpentine Soil	LLNDTLVLPNLFDLDAVLLARGTNQVRGRPAIANVIIDQLRNGGSYVAAPNLVMQSGPLALIISANATSVARRNLDGWHYVISRLDL*
Ga0126307_102284132	3300009789	Serpentine Soil	EDACLLTDTLVLPSLFEVDAVLLARGTSQVHGRPAIANVIIDQLRNGGSYVAAPQLVLQSGPLALIISEVAISAARRNLDGWHYVISRLDL*
Ga0126307_103065471	3300009789	Serpentine Soil	MPAGAASPEELEGMLEDACLLNDTSFLPSLFEVDAVLLARGTSQVRGRPAIAGVIIDQLRNGGSYVAAPQLVMQSGPLALIISGAAISVARRNLDGWHYVISRLDL*
Ga0126307_107410581	3300009789	Serpentine Soil	MPAGAASPEELEGMLEDACLLNDTSFLPNLFDLDAVLLARGTSQVRGRAAITNVIISQLRHGGSYVAAPQLVMQSGPLALIISDAATSVARRNLDGWHYVISRLDL*
Ga0126307_107968311	3300009789	Serpentine Soil	LVLPNLFDLDAVLLARGTNQVRGRPAIANVIIEQVRDGGSYVAAPNLVLQSGPLALIISANATSVARRNLDGWHYLISWLDL*
Ga0126307_108744462	3300009789	Serpentine Soil	DACLLNDTLVLPNLFDLDAVLLARGTNQVRGRPAIANVIIEQLRDGGSYVAAPNLVLQSGPLALIISANATSVAKRNLDGWHYVISRLDL*
Ga0126307_117829391	3300009789	Serpentine Soil	EELEAMLEDACLLNDTTLLTKLFDADAVLLARGRSQVRGRPAIANVIIGQLRDGGSYVAAPNLVMQSGPLALIISANATSVARRSLDGWHYVISRLDL*
Ga0126313_100826682	3300009840	Serpentine Soil	MPAGAASPEELEGMLEDACLLNDTLVLPNLFDLDAVLLARGTNQVRGRPAIANVIIEQLRDGGSYVAAPNLVLQFGPIALIISANATSVAKRNLDGWHYVISRLDL*
Ga0126313_103032082	3300009840	Serpentine Soil	MPAGAASPEELEGMLEDACLLNDTLVLPSLFEVDAVLLARGTSQVHGRPAIADVIIDQLRNGGSYVAAPQLVMQSGPLALIISGAAISVARRNLAGWHYVISRLDL*
Ga0126313_104828991	3300009840	Serpentine Soil	CLLNDTLVLPNLFDLDAVLLARGTNQVRGRPAIANVIIDQLRNGGSYVAAPNLVMQSGPLALIISANATSVVKRNLDGWHYVISRLDL*
Ga0126313_105331832	3300009840	Serpentine Soil	MSAGAASPEELEEMLEDACLLNDTTLLTKLFDADAVLLARGRSQVRGRPAIANVIINQLRDGGSYVASPNLVMQSGPLALIISANATSVARRSLDGWHYVISRLDL*
Ga0126313_105545071	3300009840	Serpentine Soil	MPAGAASPEELEGMLEDACLLNDTSFLPNLFDLDAVLLARGTNQVRGRAAITNVIISQLRHGGSYVAAPQLVMQSGPLALIISDAATSVARRNLDGWHYVISRLDL*
Ga0126313_110516342	3300009840	Serpentine Soil	MPAGAASPEELEGLLEDACLLNDTLVLPNLFDLDAVLLARGTNQVRGRPAIADMIIEQLRDGGSYVAAPNLVLQSGPLALIISGAATSVAKRNLDGWHYVISRLDL*
Ga0126305_102252822	3300010036	Serpentine Soil	MPAGAASPEELEGMLEDACLLNDTLVLPNLFDLDAVLLARGTNQVRGRPAIANVIIEQLRDGGSYVAAPNLVLQSGPLALIISANATSVAKRNLDGWHYVISRLDL*
Ga0126305_107708602	3300010036	Serpentine Soil	MPAGAASPEELEGMLEDACLLNDTSFLPNLFDLDAVLLARGTSQVRGRAAIANVIISQLRHGGSYVAAPNLVMQSGPLALIISANATSVARRNL
Ga0126305_107805481	3300010036	Serpentine Soil	EELEEMLEDACLLNDTSFLPNLFDVDAVLLARGTSQVRGRAAITNVITDQLRHGGSYVAAPQLVMQSGPLALIISDAAISVARRNLDGWHYVISRLDL*
Ga0126304_107436502	3300010037	Serpentine Soil	MPAGAASPEELEGMLEDACLLNDTLVLPNLFDVDAVLLAQGTSQVRGRAAIANVIISQLRHGGSYVAAPQLVMQSGPLALIISGAATSVARRNLDGWHYVISRLDL*
Ga0126304_109850601	3300010037	Serpentine Soil	NDTLVLPLLFEVDAVLLARGTNQVRGRPAIANVIISQLRHGGSYVAAPQLVMQSGPLALIISDPAISVARRNLDGWHYLISWLDL*
Ga0126315_105424411	3300010038	Serpentine Soil	MPAGAASPEELEGMLEDACLLNDTLVLPSLFEVDAVLMARGTSQVRGCAAITNVIISQLRHGGSYVAAPQLVMQSGPLALIISGAAISVARRNLDGWHYAISRLDL*
Ga0126315_105843302	3300010038	Serpentine Soil	DTLVLPNLFDLDAVLLARGTNQVRGRPAIANVIIEQLRDGGSYVAAPNLVLQSGPLALIISANATSVAKRNLDGWHYVISRLDL*
Ga0126309_100101263	3300010039	Serpentine Soil	MPAGAASPEELEGMLEDACLLNDTLVLPNLFDLDAVLLARGTNQVRGRPAIANVIIEQLRHGGSYVAAPNLVLQSGPLALIISANATSVAKRNLDGWHYVISRLDL*
Ga0126309_104851902	3300010039	Serpentine Soil	ACLLNDTSFLPSLFEVDALLLARGTSQVRGRPAIADVIIDELWNGGSYVAAPQLVMQSGPLALIISGAAISVARRNLDGWHYVISRLDL*
Ga0126308_104714672	3300010040	Serpentine Soil	MPAGAASPEELEGMLEDACLLNDTLVLPSLFEVDAVLLARGTSQVHGRPAIADVIIDQLRNGGSYVAAPQLVMQSGPLALIISGAAISVARRNLDGWHYVISRLDL*
Ga0126308_111899841	3300010040	Serpentine Soil	MPAGAASPEELEGMLEDACLLNDTSFLPNLFDVDAVLLARGTNQVRGRPAITNVISSQLRQGGSYVAAPQLVMQSGPLALIISDAAISVARRNLDGWHYLISWLHL*
Ga0126308_112278961	3300010040	Serpentine Soil	PAGAASPEELEGMLEDACLLNDTSFLPNLFDVDGVLLARGTSQVRGRAAITNVITDQLRHGGSYVAAPQLVMQSGPLALIISDAAISVAGRTLDGWHSVISRLDL*
Ga0126312_100431133	3300010041	Serpentine Soil	MSAGAASPEELEGMLEDACLVNDTSFLPNLFDVDAVLLARGTGQVRGRSAITNVIIDQLRHGGSYVAAPQLVMQSGPLALIISDAAISVARRNLDGWHYVISRLDL*
Ga0126312_102320121	3300010041	Serpentine Soil	MPAGAASPEELEGMLEDACLLNDTSFLHSLFDIDAVLLGRRTSQVRGCSAIANVIVDQLRDGGSYVAAPNLVMQSGPLALIISDAATSVARRSLDGWHYVITRLDL*
Ga0126312_102336621	3300010041	Serpentine Soil	AGAASPEELEAMLEDACLLNDTTLLTKLFDADAVLLARGRSQVRGRPAIANVIINQLRDGGSYVASPNLVMQSGPLALIISANATSVARRSLDGWHYVISRLDL*
Ga0126314_100869201	3300010042	Serpentine Soil	MSAGAASPEELEAMLEDACLLLNDTTFLTKLFDVDAVLLARGRSQVRGRPVIANVIISQLRNGGSYVAAPQLVMQSGPLALIISANATSVAKRNLAGWHYVISRLDL*
Ga0126314_104285451	3300010042	Serpentine Soil	MPAGAASPEELEGMLEDACLLNDTSFLPNLFDVDGVLLARGTSQVRGRAAITNVITDQLRHGGSYVAAPQLVMQSGPLALIISDAAISVARRSLDGWHYVISRLDL*
Ga0126310_102390991	3300010044	Serpentine Soil	TLVLPNLFDLDAVLLARGTNQVRGRPAIANVIIDQLRNGGSYVAAPNLVMQSGPLALIISANATSVVKRNLDGWHYVISRLDL*
Ga0126310_109335011	3300010044	Serpentine Soil	MPAGASSPEELEGMLEDACLLNDTSFLPNLFDVDAVLLARGTNQVRGRPAIASVIIEQLRDGGSYVAAPQLVVQSGPLALIISDAAI
Ga0126311_102046302	3300010045	Serpentine Soil	MPAGAASPEELEGMLEDACLLNDTSFLPNLFDVDGVLLARGTSQVRGRAAITNVITDQLRHGGSYVAAPQLVMQSGPLALIISDAAISVARRNLDGWHYVISRLDL*
Ga0126311_105751032	3300010045	Serpentine Soil	GAASPEELEGMLEDACLLNDTLVLPNLFDLDAVLLARGTNQVRGRPAIANVIIEQLRDGGSYVAAPNLVLQSGPLALIISANATSVAKRNLDGWHYVISRLDL*
Ga0126311_108948201	3300010045	Serpentine Soil	MPAGAASPEELEGMLEDACLLHDTSFLPNLFDLDAVLLARGTSQVRGRAAIANVIISQLRHGGSYVAAPQLVMQSGPLALIISGAATSVARRNLDGWHYVISRLDL*
Ga0126306_100919323	3300010166	Serpentine Soil	MPAGAASPEELEGMLEDACLLNDASFLPDLFDIDAVMLARGESQVRGRSAIANVIIDQLRDGGSYVAAPNLVMQSGPLALIISDAATSVARRSLDGWHYVISRLDL*
Ga0126306_101276553	3300010166	Serpentine Soil	MPAGAASPEELEGMLEDACLLTDTLVLPSLFEVDAVLLARGTSQVHGRPAIANVIIDQLRNGGSYVAAPQLVLQSGPLALIISEVAISAARRNLDGWHYVISRLDL*
Ga0126306_107631622	3300010166	Serpentine Soil	LASVMPAGAASPEELEGMLEDACLLNDTLVLPLLFEVDAVLLARGTNQVRGRPAIANVIISQLRHGGSYVAAPQLVMQSGPLALIISDPAISVARRNLDGWHYLISWLDL*
Ga0126306_108052681	3300010166	Serpentine Soil	PATAFVARFLGFTNLFDVEAVLLARGTSQVRGRSAIAHVIIGQLRDGGCYVAAPQLVMQSGPLALIISGAATSVARRNLDGWHYVISRLDL*
Ga0126306_112195491	3300010166	Serpentine Soil	KPSLSSSSPVMPAGAASPEELEGMLEDACLLNDTSFLPSLFEVDAVLLARGTSQVRGRPAIAGVIIDQLRNGGSYVAAPQLVMQSGPLALIISGAAISVARRNLDGWHYVISRLDL*
Ga0126306_115053852	3300010166	Serpentine Soil	MPAGAASPEELEGMLEDACLLNDTSFLPNLFDVDAVLLARGTNQVRGRPAITNVISSQLRQGGSYVAAPQLVMQSGPLALIISDAAISVARRNLDGWHYLISWLDL*
Ga0138513_1000630631	3300011000	Soil	MLEDACMLSDAPLLKSLFDDDAVLVSRATSQVRERSAIVEVIIDHLGHGGSYVAATQLVMQCGRLALIISGEATSVARRGPDGWHYVISYLDLS
Ga0162653_1000206051	3300012937	Soil	GPESPEDLEAMLEDACMLSDAPLLTSLFDDDAVLVSRATSQVRERSAIVEVIIDHLGHGGSYVAATQLVMQCGRLALIISGEATSVARRGPDGWHYVISYLDLSYSPA*
Ga0162651_1000012954	3300012938	Soil	VSLVPAGAESPEDLEAMLEDACMLSDAPLLTSLFDDDAVLVSRATSQVRERSAIVEVIIDHLGHGGSYVAATQLVMQCGRLALIISGEATSVARRGPDGWHYVISYLDLSYSPA*
Ga0162651_1000659571	3300012938	Soil	SVMPAGAASPEELEGMLEDACLLNDTSFLPILFDVEAVLLARGTSQVRGRAAITNVIISQLRHGGSYVAAPQLVMQSGPLALIISDAAISVARRNLDGWHYVISRLDL*
Ga0162650_1000002685	3300012939	Soil	MPAGAASPEELEGMLEDACLLNDTSFLPILFDVEAVLLARGTSQVRGRAAITNVIISQLRHGGSYVAAPQLVMQSGPLALIISDAAISVARRNLDGWHYVISRLDL*
Ga0162650_1000036231	3300012939	Soil	LFDVDAVLLARGTSQVRGRAAIANVIIDQLRDGGSYVAAPHLVMQSGPLALIISDAAISVARRSLDGWHYVISRLDL*
Ga0162652_1000962111	3300012941	Soil	SETASAVVEDDDAVLLTPTSSQVRGRSAIAGVITNHLQDGCSYVAAPQLVMQSGRLALIISGEATSVAHRDQDGWHYVISRLEL*
Ga0173483_100161865	3300015077	Soil	EDACLLGDAPFLANLFDVDAVLLTRGTSQLRGRTAIAKVIIDQLRDGGSYVGAPRLVMQSDQLALIISDAATSVARRNLDGWRYVISRLDL*
Ga0132258_100736425	3300015371	Arabidopsis Rhizosphere	MLEDACLLSDASLLRSLFEVDAVLFTRASTQVRGRSAIAGVIIDHIRDGGNYVAAPQLVMQSGRLALIISGEATSVAHRDQVGWHYVISRLDL*
Ga0190266_101710791	3300017965	Soil	MPAGAASPEELEGMLEDACLLNDTTFLTKLFDVDAVLLARGRSQVRGRPAIANVIINQLRDGGSYVAAPNLVMQSGPLALIISANATSVARRNLDGWHYVISRLDL
Ga0190266_104624772	3300017965	Soil	EDACLLNDTSFLPTLFDVEAVLLTRGTIQVRGRAAITKLIISQLRHGGSYVAAPQLVMQSGPLALIISDAAISVARRNQGGWHYVISRLDMR
Ga0184608_100017318	3300018028	Groundwater Sediment	LVLPSLFEVDAVLLPRGTSQVRGCPAIANVIIDQLRHGGSYVAAPQLVMQSGPLALIISGAAISVARRNLDGWHYVISRLDL
Ga0184608_104136952	3300018028	Groundwater Sediment	MLEDACLLGDAAFLANLFDVDAILLARGTSQVRGRSAIAKVIIDQLRDGRSYVGAPPLVMQSGQLALIISDAATSVARRSLHGWRYVISR
Ga0184634_104882142	3300018031	Groundwater Sediment	MLEDACLLGDAAFLANLFDVDAILLARGTSQVRDRSAKAKVIIDQLRDGRSYVGAPPLVMQSGQLALIISDAATSVARRSLHGWRYVISRLDL
Ga0184620_100044983	3300018051	Groundwater Sediment	MLEDACLLGDAAFLANLFDVDAILVARGTSQVRDRSAIAKVIIDQLRDGRSYVGAPPLVMQSGQLALIISDAATSVARRSLHGWRYVISRLDL
Ga0184621_101000802	3300018054	Groundwater Sediment	MLEDACLLGDAAFLANLFDVDAILLARGTSQVRGRSAIAKVIIDQLRDGGSYVGAPRLVMQSGQLALIISDAATSVARRSLDGWRYVISRLDL
Ga0184617_11498672	3300018066	Groundwater Sediment	VSAGAACPEELEALLEDACLLGDASFVANLFDVDAILLIRGTSEVRGRCAIAKVFIDQLLNGGSYVGAPQLVLQSGQLALIISDVATSVARRSPDGWHYVISRLDL
Ga0184635_102712872	3300018072	Groundwater Sediment	MLEDACLLSDASMLTSLFDDDAVLLTRAISQVRGRSAIAGVIIDYVRDGGNYVAAPELVMQSGPLALIISGEATSVARRDPDGWHYVISRLDLSLAP
Ga0184624_100177475	3300018073	Groundwater Sediment	FLANLFDVDAILLARGTSQVRGRSAIAKVIIDQLRDGRSYVGAPRLVMQSGQLALIISDAATSVARRSLDGWRYVISRLDL
Ga0184632_102301371	3300018075	Groundwater Sediment	MLEDACLLSDASLLTSLFDDDAVLLTRATSQIRGRSAIADVIIGQLRDGGSYVAAPQLVMQSGPLALIISGAATSVARRSLDGWHYVISRLDL
Ga0184625_100670402	3300018081	Groundwater Sediment	MLEDACLLSDASLLTSLFDDDAVLLTRATSQIRGRSAIAGVIIDYVRDGGNYVAAPELVMQSGPLALIISGEATSVARRDPDGWHYVISRLDLSLAPKMTS
Ga0184625_101462002	3300018081	Groundwater Sediment	LGDAAFLANLFDVDAILLARGTSQVRDRSAIAKVIIDQLRDGGSYVGAPRLVMQSGQLALIISDAATSVARRSLDGWRYVISRLDL
Ga0184625_104845962	3300018081	Groundwater Sediment	MLEDACLLNATSFLPILFDVEAVLLARGTSQVRGRAAITNVIISQLRDGGSYVAAPNLVLQSGPLALIISGAATSVARRSLDGWHYVISR
Ga0190275_125148112	3300018432	Soil	LVLPSLFEVDAVLLARGTSQVRGRPAIANVIIDQLRHGGSYVAAPQLVMQSGPLALIISGAAISVARRNLDGWHYVISRLDL
Ga0190269_104300892	3300018465	Soil	MPAGASSPEELEGMLEDACLLNDTSFLPNLFDVDAVLLARGTNQVRGRPAIANVIIEQLRDGGSYVAAPQLVMQSGPLALIISDAAISVARRSLDGWHYVISRLDL
Ga0190269_105949232	3300018465	Soil	MLEDACLLNDTSFLPSLFDVDAVLLARGTSQVRGCPAIANVIIDQLRHGGSYVAAPQLVMQSGPLALIISGAAISVARRNL
Ga0190268_100416543	3300018466	Soil	MLEDACLLNDTSFLPNLFDVDAVLLARGTNQVRGRPAIANVIIEQLRDGGSYVAAQQLVMQSGPLALIISDAAISVARRSLDGWHYVISRLDL
Ga0190268_104356621	3300018466	Soil	MSAGAASPEELEEMLEDACLLNDTTFLTKLFDVDAVLLARGRSQVRGRPAIANVIINQLRDGGSYVASPNLVMQSGPLALIISANATSVARRSLDGWHYVISRLDL
Ga0190268_105396801	3300018466	Soil	MPAGAASPEELEGMLEDACLLNDTSFLPILFDVEAVLLARGTSQVRGRAAITNVIISQLRHGGSYVAAPQLVMQSGPLALIISGAAISVARRNLDGWHYVISRLDL
Ga0190268_110240521	3300018466	Soil	EELEGMLEDACLLNDTLVLPSLFEVDAVLLARGTSQVRGCPAIANVIIDQLRHGGSYVAAPQLVMQSGPLALIISAKATSVAKRNLDGWHYVISRLDL
Ga0190268_114122131	3300018466	Soil	SFLPNLFDVEAVLLARGTSQVRGRVAITNVIIDQLRRGGSYVAAPQLVMQSGPLALIISDAAISVARRSLDGWHYVISRLDL
Ga0190270_101093302	3300018469	Soil	MSAGAASPEELEAMLEDACLLLNDTTFLTKLFDVDAVLLARGRSQVRGRPAIANVIIGQLRDGGSYVAAPNLVMQSGPLALIISANATSVARRSLDGWHYVISRLDL
Ga0190270_112471041	3300018469	Soil	MPAGAASPAELEGMLEDACLLNDTLVLPSLFEVDAVLLARGTSQVRGRPAIANVIIDQLRHGGSYVAAPQLVMQSGPLALIISDAAISVARHSLDGWRYVISRLDLSSPASIRPDRLAPP
Ga0190270_115233661	3300018469	Soil	DTSFLPNLFDVDAVLLTRGTSQVRGRAAITNVIISQLRHGGSYVAAPQLVMQSGPLALIISGAAISVARRNLDGWHYVISRLDL
Ga0190274_104931622	3300018476	Soil	MPAGAASPEELEGMLEDACLLNDTSFLPNLFDVEAVLLARGTSQVRGRAAITNVIISQLRNGGSYVAAPQLVLQSGPLALIISGAATSVAKRNVDGWHYVISRLDL
Ga0190274_107889342	3300018476	Soil	MSAGAASPEELEAMLEDACLLLNDTTFLTKLFDVDAVLLARGRSQVRGRPAIANMIIGQLRDGGSYVAAPNLVMQSGPLALIISANATSVARRSLDGWHYVISRLDL
Ga0184645_12782281	3300019233	Groundwater Sediment	LFEVDAVLLPRGTSQVRGCPAIANVIIDQLRHGGSYVAAPQLVMQSGPLALIISGAAISVARRNLDGWHYVISRLDL
Ga0184644_15699771	3300019269	Groundwater Sediment	LVLPSLFEVDAVLLPRGTSQVRGCPAIANVIIDQLRHGGSYVAAPQLVMQSGPLALIICGAAISVARRNLDGWHYVISRLDL
Ga0173481_103778891	3300019356	Soil	MLEDACLLGDAPFLANLFDVDAVLLTRGTSQLRGRTAIAKVIIDQLRDGGSYVGAPRLVMQSDQLALIISDAATSVARRNLDGWRYVISRLDL
Ga0190267_103227181	3300019767	Soil	MPAGAASPEELEGMLEDACVLNDTLVLPSLFEVDAVLLARGTRQVRGCPAIADVIIDQLRHGGSYVAAPQLVLQSGPLALIISANATSVARRNLDGWHYVISRLDL
Ga0190267_103935142	3300019767	Soil	TSLFDNDAVLLTRATSQVHGRSAIAQVIIDHLLDGGSYVAAPQVVMQSERLALIISGTATSVARRGPDGWHYVITRLDL
Ga0190267_104292162	3300019767	Soil	MLEDACLLNDTSFLPNLFDVDAVLLARGTNQVRGRPAIANVIIEQLRDGGSYVAAPQLVMQSGPLALIISDAAISVARRSLDGWHYVISRLDL
Ga0190267_110649992	3300019767	Soil	MLEDACLLSDAPLLTSLFDDDAVLLSGATSQVRGRSAIVEVIIDHLGHGGSYVAGPQLVMQCSRLALIISGEATSVARRGPDGWHYVISHLDLRCCH
Ga0193704_10094761	3300019867	Soil	ANLFDVDAILLARGTSQVRGRSAIAKVIIDQLRDGGSYVGAPRLVMQSGQLALIISDAATSVARRSLDGWRYVISRLDL
Ga0193703_10110292	3300019876	Soil	MLEDACLLGDAAFLANLFDVDAILLARGTSQVRDRSAIAKVIIDQLRDGRSYVGAPPLVMQSGQLALIISDAATSVARRSLHGWRYVISRLDL
Ga0193697_10141792	3300020005	Soil	MLEDACLLGDAAFLANLFDVDAILLARGTSQVRDRSAIAKVIIDQLRDGRSYVGAPRLVMQSGQLALIISDAATSVARRSLHGWRYVISRLDL
Ga0193738_10277882	3300020020	Soil	MPAGAASPEELEGLLEDACLLNDTSFLPDLFDVDAVLLARGTSQVRGRSAIADVIIGQLRDGGSYVAAPQLVMQSGPLALIISGAATSVARRNLDGWHYVISRLDL
Ga0193738_10337242	3300020020	Soil	MSSGAASPEELEGMLEDACLLNDASFLPTLFDVDAVLLAPGPNQVRGRPAIANVIIEQLRDGGSYVAAPNLVLQSGPLALIISANATSVARRNLDGWHYVISRLDL
Ga0222625_18171042	3300022195	Groundwater Sediment	SLFEVDAVLLPRGTSQVRGCPAIANVIIDQLRHGGSYVAAPQLVMQSGPLALIISGAAISVARRNLDGWHYVISRLDL
Ga0207675_1024294342	3300026118	Switchgrass Rhizosphere	MLEDACLLGDASFVASLFDVDAVLLARGTSQVRGRPAIAKVIIDQLRDDGSYVGAPCLVMQSGQLALIISGAATSVVLHSLDGWRYVISRLDL
Ga0209486_106048341	3300027886	Agricultural Soil	MPAGAASPEELEGMLEDACLLTDRSVLPSLFEVDAVLLARGISQVHGRPAIAKVMQSGPLALIISGAAISVARRNLDGWHYVISRLDL
Ga0247818_114208992	3300028589	Soil	LLEDACLLNDTSFLPDLFDVDAVLLARGKGQVRGRSAIADVIIGQLRDGGSYVAAPQVVMQSGPLALIISGAATSVARRSMDGWHYVISRLDL
Ga0307291_10032334	3300028707	Soil	MLEDACLLGDAAFLANLFDVDAILLARGTSQVRGRSAIAKVIIDQLRDGGSYVGAPRLVMQSGQLALIISDAATSVARRSLHGWRYVISRLDL
Ga0307322_100178683	3300028710	Soil	MLEDACLLGDAAFLANLFDVDAILLARGTSQVRDRSAKAKVIIDQLRDGRSYVGAPPLVMQSGQLALIISDAATSVARRSLH
Ga0307293_100706583	3300028711	Soil	MLEDACLLGDAAFLANLFDVDAILLARGTSQVRDRSAIAKVIIDQLRDGRSYVGAPRLVTQSGQLALIISDAATSVARRSLHGWRYVISRLDL
Ga0307307_100291063	3300028718	Soil	GCPEELEAMLEDACLLGDAAFLANLFDVDAILLARGTSQVRGRSAIAKVIIDQLRDGGSYVGAPRLVMQSGQLALIISDAATSVARRSLDGWRYVISRLDL
Ga0307301_101124602	3300028719	Soil	MLEDACLLGDAAFLANLFDVDAILLARGTSQVRGRSAIAKVIIDQLRDGGSYIGAPRLVMQSGQLALIISDAATSVARRSLDGWRYVISRLDL
Ga0307318_100212283	3300028744	Soil	MLEDACLLGDTAFLPSLFDVDAVLLTRATVEVRGPSAIADVIIDHLRTGGSYVAAPHLVMPSGRLALIISQTATSVARRGLDGWHYVISSLDI
Ga0307280_100075621	3300028768	Soil	MLEDACLLGDAAFLANLFDVDAILLARGTSQVRGRSAIAKVIIDQLRDGGSYVGAPRLVMQSGQLALIISDAATSVARRSLDGWRYVISRLDS
Ga0307320_101749452	3300028771	Soil	ELEAMLEDACLLGDAAFLANLFDVDAILLARGTSQVRDRSAIAKVIIDQLRDGRSYVGAPPLVMQSGQLALIISDAATSVARRSLHGWRYVISRLDL
Ga0307287_100987532	3300028796	Soil	MLEDACLLSDASLLTSLFDDGAVLLTRAISQVRGRSAIAGVIIDYVRDGGNYVAAPELVMQSGPLALIISGEATSVARRDPDGWHYVISRLDLSLAPNMTS
Ga0307284_101622142	3300028799	Soil	GLLSSAVSAGAGCPEELEAMLEDACLLGDAAFLANLFDVDAILLARGTSQVRGRSAIAKVIIDQLRDGGSYVGAPRLVMQSGQLALIISDAATSVARRSLDGWRYVISRLDL
Ga0307294_100002338	3300028810	Soil	MPAGAASPEELEGMLEDACLLNDTLVLPSLFEVDAVLLPRGTSQVRGCPAIANVIIDQLRHGGSYVAAPQLVMQSGPLALIISGAAISVARRNLDGWHYVISRLDL
Ga0307302_100487831	3300028814	Soil	MLEDACLLGDAAFLANLFDVDAILLARGTSQVRDRSAIAKVIIDQLRAGRSYVGAPRLVMQSGQLALIISDAATSVARRSLHGWRYVISRLDL
Ga0307312_100890461	3300028828	Soil	LGDAAFLANLFDVDAILLARGTSQVRDRSAKAKVIIDQLRDGGSYVGAPRLVMQSGQLALIISDAATSVARRSLDGWRYVISRLDL
Ga0307278_100191644	3300028878	Soil	MSAGAASPEELEGMLEDACLLNDTTFLTKLFDVDAVLLARGRSQVCGRPAIANVIIGQLRDGGSYVASPHLVLQSGPLALIISANATSVARRSLDGWHYVISRLDL
Ga0307278_100395142	3300028878	Soil	MLEDACLLSDASLLTSLFDDDAVLLTRAISQVRGRSAIAGVIIDYVRDGGNYVAAPELVMQSGPLALIISGEATSVARRDPDGWHYVISRLDLSLAPNMTS
Ga0268240_100017993	3300030496	Soil	MLEDACLLNDTSFLPNLFDVDAVLLARGTNQIRGRPAIANVIIDQLRDGGSYVAAPQLVMQSGPLALIISDAAISVARRSLDGWHYVISRLDL
Ga0308201_103641331	3300031091	Soil	MLEDACLLGDAAFLANLFDVDAILLARGTSQVRDRSAIAKVIIDQLRDGRSYVGAPPLVMQSGQLALIISDAATSVARRSLDGWRYVISRLDL
Ga0307408_1000226465	3300031548	Rhizosphere	MLEDACLLNDTLVLPNLFDLDAVLLARGTNQVRGRPAIANVIIDQLRNGGSYVAAPNLVMQSGPLALIISANATSVVKRNLDGWHYVISRLDL
Ga0307408_1000643833	3300031548	Rhizosphere	MLEDACLLNDTSFLPNLFDVDAVLLARGTNQVRGRPAIANVIIEQLRDGGSYVAAPQLVVQSGPLALIISDAAISVARRSLDGWHYVISRLDL
Ga0307408_1002040173	3300031548	Rhizosphere	MLEDACLLNDTSFLPSLFEVDAVLLVRGTSQVHGRPAIANVIIDQLRNGGSYVAAPQLVMQSGPLALIISGAAISVARRNLDGWHYVISRLDL
Ga0307408_1003312912	3300031548	Rhizosphere	MPAGAASPEELEGMLEDACLLNDTLVLPSLFEVDAVLLARGTSQVHGRPAIADVIIDQLRNGGSYVAAPQLVMQSGPLALIISGAAISVARRNLAGWHYVINRLDL
Ga0307405_100953722	3300031731	Rhizosphere	MLEDACLLNDTSFLPNLFDVDAVLLGRGTNQVRGRPAIANVIIEQLRDGGSYVAAPQLVVQSGPLALIISDAAISVARRSLDGWHYVISRLDL
Ga0307405_104921961	3300031731	Rhizosphere	MSAGAASPEELEAMLEDASLLNDTLVLPNLFDLDAVLLARGTNQVRGRPAIANVIIDQLRNGGSYVAAPNLVMQSGPLALIISANATSVARRNLDGWHYVISRLDL
Ga0307413_101872122	3300031824	Rhizosphere	MPAGAASPEELEGMLEDACLLNDTLVLPNLFDLDAVLLARGTNQVRGRPAIANVIIDQLRNGGSYVAAPNLVMQSGPLALIISANATSVVKRNLDGWHYVISRLDL
Ga0307413_104046722	3300031824	Rhizosphere	MSAGAASPEELEGMLEDACLLNDTLVLPSLFEVDAVLLARGTSQVHGRPAIADVIIDQLRNGGSYVAAPQLVMQSGPLALIISGAAISVARRNLAGWHYVISRLDL
Ga0307413_115237912	3300031824	Rhizosphere	DSWALMGLFDHDAVLLTRATSQVRGRSAIANVIIGQLRHGGSYIAAPQLIMQSGRLALIISGVATSVARRGPDGWHYVISRLDL
Ga0307410_103807911	3300031852	Rhizosphere	ASAMPAGASSPEELEGMLEDACLLNDTSFLPNLFDVDAVLLARGTNQVRGRPAIANVIIEQLRDGGSYVAAPQLVVQSGPLALIISDAAISVARRSLDGWHYVISRLDL
Ga0307410_106079012	3300031852	Rhizosphere	MPAGAASPEELEGMLEDACLLNDTLVLPSLFEVDAVLLARGTSQVHGRPAIADVIIDQLRNGGSYVAAPQLVMQSGPLALIISGAAISVARRNLAGWHYVISRLDL
Ga0307410_114033322	3300031852	Rhizosphere	MPAGAASPEELEGMLEDACLLNDTSFLPNLFDVDGVLLARGTSQVRGRAAITNVITDQLRHGGSYVAAPQLVMQSGPLALIISDAAISVAR
Ga0307406_100477253	3300031901	Rhizosphere	MPAGASSPEELEGMLEDACLLNDTSFLPNLFDVDAVLLARGTNQVRGRPAIANVIIEQLRDGGSYVAAPQLVVQSGPLALIISDAAISVARRSLDGWHYVISRLDL
Ga0307407_100381724	3300031903	Rhizosphere	MLEDACLLNDTLVLPSLFEVDAVLLARGTSQVHGRPAIADVIIDQLRNGGSYVAAPQLVMQSGPLALIISGAAISVARRNLAGWHYVISRLDL
Ga0307407_107018581	3300031903	Rhizosphere	MPAGAASPEELEGMLEDACLLNDTSFLPNLFDVDGVLLARGTSQVRGRAAITNVITDQLRHGGSYVAAPQLVMQSGPLALIISDAAISVARRNLDGWHYVISRLDL
Ga0307412_117128852	3300031911	Rhizosphere	MLEDACLLNDTLVLPSLFEVDAVLLARGTSQVHGRPAIADVIIDQLRNGGSYVAAPQLVMQSGPLALIISGAAISVARRNLDGWHYVISRLDL
Ga0307409_1000493004	3300031995	Rhizosphere	MPAGAASPEELEGMLEDACLLNDTSFLPNLFDVDGVLLARGTSQVRGRAAITNVITDQLRHGGSYVAAPQLVMQSGPLALIISDAAISVARQNLDGWHYVISRLDL
Ga0307409_1012375461	3300031995	Rhizosphere	TLVLPSLFEVDAVLLARGTSQVHGRPAIADVIIDQLRNGGSYVAAPNLVMQSGPLALIISANATSVARRNLDGWHYVISRLDL
Ga0307409_1024476031	3300031995	Rhizosphere	ACLLNDTSFLPNLFDLDAVLLARGTSQVRGRAAITNVIISQLRHGGSYVAAPQLVMQSGPLALIISDAATSVARRNLDGWHYVISRLDL
Ga0307416_1001311921	3300032002	Rhizosphere	MLEDACLLNDTSFLPNLFDVDGVLLARGTSQVRGRAAITNVITDQLRHGGSYVAAPQLVMQSGPLALIISDAAISVARRNLDGWHYVISRLDL
Ga0307414_101398813	3300032004	Rhizosphere	PNLFDLDAVLLARGTNQVRGRPAIANVIIDQLRNGGSYVAAPNLVMQSGPLALIISANATSVVKRNLDGWHYVISRLDL
Ga0307414_104115313	3300032004	Rhizosphere	MLEDACLLNDTSFLPNLFDVDAVLLARGTNQVRGRPAIANVIIEQLRDGGSYVAAPQLVVQSGPLALIISDAAISVARRS
Ga0307411_102657451	3300032005	Rhizosphere	MSAGAASPEELEAMLEDACLLNDTLVLPSLFEVDAVLLARGTSQVHGRPAIADVIIDQLRNGGSYVAAPQLVMQSGPLALIISGAAISVAR
Ga0307411_111209002	3300032005	Rhizosphere	FLPNLFDVDGVLLARGTSQVRGRAAITNVITDQLRHGGSYVAAPQLVMQSGPLALIISDAAISVARQNLDGWHYVISRLDL
Ga0307415_1008296312	3300032126	Rhizosphere	MSAGAASPEELEAMLEDACLLNDTLVLPNLFDLDAVLLARGTNQVRGRPAIANVIIDQLRNGGSYVTAPNLVMQSGPLTLIISANATSVAKRNLDGWHYVISRLDL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041999

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences