Metagenome / Metatranscriptome Family F042232

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F042232
Family Type	Metagenome / Metatranscriptome
Number of Sequences	158
Average Sequence Length	65 residues
Representative Sequence	FEFRGTVERGEGKSRGDEAYYVLKGTLVENTSDEAKKTSSHSREVALKSFPQDMAPPQAEKK
Number of Associated Samples	138
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.63 %
% of genes near scaffold ends (potentially truncated)	91.77 %
% of genes from short scaffolds (< 2000 bps)	87.34 %
Associated GOLD sequencing projects	126
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (91.772 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (13.291 % of family members)
Environment Ontology (ENVO)	Unclassified (41.772 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.937 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 35.56% Coil/Unstructured: 64.44%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF04366	Ysc84	20.89
PF07366	SnoaL	5.70
PF02885	Glycos_trans_3N	2.53
PF00210	Ferritin	2.53
PF01968	Hydantoinase_A	2.53
PF05378	Hydant_A_N	1.90
PF00990	GGDEF	1.90
PF02567	PhzC-PhzF	1.27
PF00158	Sigma54_activat	1.27
PF02915	Rubrerythrin	1.27
PF09994	DUF2235	1.27
PF13519	VWA_2	0.63
PF01042	Ribonuc_L-PSP	0.63
PF00970	FAD_binding_6	0.63
PF08668	HDOD	0.63
PF12706	Lactamase_B_2	0.63
PF13398	Peptidase_M50B	0.63
PF01337	Barstar	0.63
PF12645	HTH_16	0.63
PF13463	HTH_27	0.63
PF13380	CoA_binding_2	0.63
PF08352	oligo_HPY	0.63
PF04402	SIMPL	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	20.89
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	3.80
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	1.27
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.63
COG2732	Barstar, RNAse (barnase) inhibitor	Transcription [K]	0.63
COG2859	Outer membrane channel-forming protein BP26/OMP28, SIMPL family	Cell wall/membrane/envelope biogenesis [M]	0.63
COG2968	Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domain	Function unknown [S]	0.63
COG3471	Predicted secreted (periplasmic) protein	Function unknown [S]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.77 %
Unclassified	root	N/A	8.23 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.77 %
Unclassified	root	N/A	8.23 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.77 %
Unclassified	root	N/A	8.23 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	39.24 %
Unclassified	root	N/A	8.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	23.42 %
Unclassified	root	N/A	8.23 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.43 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	23.42 %
Unclassified	root	N/A	8.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.43 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	23.42 %
Unclassified	root	N/A	8.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.43 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.43 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3.16 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	1.90 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1.27 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.43 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.90 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.90 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	0.63 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.63 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000574\|JGI1357J11328_10049875	All Organisms → cellular organisms → Bacteria	1649	Open in IMG/M
3300001546\|JGI12659J15293_10006460	All Organisms → cellular organisms → Bacteria	3402	Open in IMG/M
3300002245\|JGIcombinedJ26739_100202687	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1875	Open in IMG/M
3300004080\|Ga0062385_10937456	Not Available	577	Open in IMG/M
3300004091\|Ga0062387_101455865	Not Available	547	Open in IMG/M
3300004092\|Ga0062389_103396154	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300004972\|Ga0072325_1248391	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300005327\|Ga0070658_10814445	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300005343\|Ga0070687_101336890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300005437\|Ga0070710_10897917	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300005468\|Ga0070707_100214079	All Organisms → cellular organisms → Bacteria	1878	Open in IMG/M
3300005471\|Ga0070698_100681259	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	970	Open in IMG/M
3300005561\|Ga0066699_11216634	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005591\|Ga0070761_10703706	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	633	Open in IMG/M
3300005875\|Ga0075293_1020193	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	838	Open in IMG/M
3300005938\|Ga0066795_10143595	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300006050\|Ga0075028_100763637	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300006052\|Ga0075029_100017758	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3959	Open in IMG/M
3300006059\|Ga0075017_100213438	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300006102\|Ga0075015_100798964	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300006162\|Ga0075030_100319002	All Organisms → cellular organisms → Bacteria → Acidobacteria	1241	Open in IMG/M
3300006162\|Ga0075030_100483877	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300006162\|Ga0075030_100689042	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300006797\|Ga0066659_10516175	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300009038\|Ga0099829_10688364	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300009088\|Ga0099830_11762979	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300009521\|Ga0116222_1522342	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300009522\|Ga0116218_1004351	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6940	Open in IMG/M
3300009522\|Ga0116218_1136526	All Organisms → cellular organisms → Bacteria → Acidobacteria	1114	Open in IMG/M
3300009524\|Ga0116225_1104634	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300009524\|Ga0116225_1304322	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	712	Open in IMG/M
3300009616\|Ga0116111_1012295	All Organisms → cellular organisms → Bacteria	3393	Open in IMG/M
3300009623\|Ga0116133_1102617	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	728	Open in IMG/M
3300009634\|Ga0116124_1138746	All Organisms → cellular organisms → Bacteria → Acidobacteria	681	Open in IMG/M
3300009639\|Ga0116122_1196148	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300009641\|Ga0116120_1171737	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300009643\|Ga0116110_1093021	All Organisms → cellular organisms → Bacteria → Acidobacteria	1031	Open in IMG/M
3300009643\|Ga0116110_1166216	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300009643\|Ga0116110_1182090	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300009683\|Ga0116224_10076878	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1625	Open in IMG/M
3300009700\|Ga0116217_10261296	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300009759\|Ga0116101_1180973	Not Available	530	Open in IMG/M
3300009764\|Ga0116134_1049046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1619	Open in IMG/M
3300009824\|Ga0116219_10116313	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300009839\|Ga0116223_10245307	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300010366\|Ga0126379_11811957	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	714	Open in IMG/M
3300010379\|Ga0136449_102930915	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300011120\|Ga0150983_15122176	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300012202\|Ga0137363_10790998	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300012202\|Ga0137363_10838527	All Organisms → cellular organisms → Bacteria → Acidobacteria	780	Open in IMG/M
3300012205\|Ga0137362_10400660	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300012209\|Ga0137379_10890031	All Organisms → cellular organisms → Bacteria → Acidobacteria	795	Open in IMG/M
3300012362\|Ga0137361_10875027	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300012469\|Ga0150984_123369029	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300012582\|Ga0137358_10795163	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300012683\|Ga0137398_10262031	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300012918\|Ga0137396_10757341	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M
3300012925\|Ga0137419_11495200	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300012986\|Ga0164304_11090810	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300013503\|Ga0120127_10151566	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300014155\|Ga0181524_10331794	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	683	Open in IMG/M
3300014155\|Ga0181524_10388580	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300014162\|Ga0181538_10016289	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5382	Open in IMG/M
3300014498\|Ga0182019_10022085	All Organisms → cellular organisms → Bacteria	3490	Open in IMG/M
3300014501\|Ga0182024_11115878	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300014502\|Ga0182021_11749991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300014638\|Ga0181536_10232230	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300014654\|Ga0181525_10203838	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300015241\|Ga0137418_10736475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300015242\|Ga0137412_10630030	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300016702\|Ga0181511_1015651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1226	Open in IMG/M
3300017941\|Ga0187850_10282774	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	739	Open in IMG/M
3300017946\|Ga0187879_10599518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	612	Open in IMG/M
3300017946\|Ga0187879_10731206	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300017955\|Ga0187817_10231978	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300017996\|Ga0187891_1179776	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300017998\|Ga0187870_1158106	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300018006\|Ga0187804_10099957	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1191	Open in IMG/M
3300018009\|Ga0187884_10121281	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300018019\|Ga0187874_10277674	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300018019\|Ga0187874_10328565	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300018020\|Ga0187861_10237716	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300018038\|Ga0187855_10946083	Not Available	502	Open in IMG/M
3300018042\|Ga0187871_10159930	Not Available	1270	Open in IMG/M
3300018047\|Ga0187859_10529350	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300018085\|Ga0187772_10673123	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300018086\|Ga0187769_10615316	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300018482\|Ga0066669_12392693	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300019082\|Ga0187852_1414158	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300019275\|Ga0187798_1214414	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	568	Open in IMG/M
3300019278\|Ga0187800_1544395	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300019278\|Ga0187800_1607062	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	995	Open in IMG/M
3300019284\|Ga0187797_1509765	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	500	Open in IMG/M
3300021168\|Ga0210406_11203592	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300021402\|Ga0210385_11412596	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300021405\|Ga0210387_11083930	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300021420\|Ga0210394_10486374	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300021433\|Ga0210391_10028133	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4518	Open in IMG/M
3300021475\|Ga0210392_10115806	All Organisms → cellular organisms → Bacteria	1787	Open in IMG/M
3300021559\|Ga0210409_10333594	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1364	Open in IMG/M
3300022533\|Ga0242662_10255166	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300025442\|Ga0208034_1018433	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1985	Open in IMG/M
3300025480\|Ga0208688_1002446	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6946	Open in IMG/M
3300025496\|Ga0208191_1018896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1703	Open in IMG/M
3300025496\|Ga0208191_1050334	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300025498\|Ga0208819_1088775	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300025500\|Ga0208686_1013366	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2241	Open in IMG/M
3300025507\|Ga0208188_1093310	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300025909\|Ga0207705_10631477	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300025922\|Ga0207646_11632755	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300026312\|Ga0209153_1045675	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1541	Open in IMG/M
3300026480\|Ga0257177_1050252	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300026489\|Ga0257160_1069956	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300026551\|Ga0209648_10456512	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	788	Open in IMG/M
3300026551\|Ga0209648_10655439	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300026557\|Ga0179587_10831878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300027587\|Ga0209220_1146469	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	612	Open in IMG/M
3300027591\|Ga0209733_1156481	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300027604\|Ga0208324_1004442	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5009	Open in IMG/M
3300027662\|Ga0208565_1078910	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300027669\|Ga0208981_1065235	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	927	Open in IMG/M
3300027674\|Ga0209118_1038679	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1440	Open in IMG/M
3300027737\|Ga0209038_10141976	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300027824\|Ga0209040_10308318	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300027854\|Ga0209517_10401704	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300027854\|Ga0209517_10634849	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	560	Open in IMG/M
3300027905\|Ga0209415_10425494	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300027905\|Ga0209415_10757098	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300027911\|Ga0209698_10002563	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	20512	Open in IMG/M
3300027911\|Ga0209698_11351826	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300028869\|Ga0302263_10301801	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	635	Open in IMG/M
3300028882\|Ga0302154_10459325	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300029889\|Ga0246001_1006140	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4783	Open in IMG/M
3300029954\|Ga0311331_11425607	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	569	Open in IMG/M
3300029956\|Ga0302150_10264615	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300029998\|Ga0302271_10126190	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300030399\|Ga0311353_10105093	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2743	Open in IMG/M
3300030580\|Ga0311355_10638996	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	999	Open in IMG/M
3300030659\|Ga0316363_10142492	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300030706\|Ga0310039_10304787	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300030707\|Ga0310038_10032323	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3111	Open in IMG/M
3300030707\|Ga0310038_10154847	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300031028\|Ga0302180_10385309	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300031234\|Ga0302325_11339809	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	937	Open in IMG/M
3300031236\|Ga0302324_101160234	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300031236\|Ga0302324_101897268	Not Available	752	Open in IMG/M
3300031249\|Ga0265339_10448121	Not Available	599	Open in IMG/M
3300031474\|Ga0170818_109979231	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300031708\|Ga0310686_100206851	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300031708\|Ga0310686_113256043	All Organisms → cellular organisms → Bacteria → Acidobacteria	865	Open in IMG/M
3300031754\|Ga0307475_10559023	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300031918\|Ga0311367_12158046	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.47%
Host-Associated	Host-Associated	2.53%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.66%
Aquatic	Environmental → Aquatic	34.81%
Plants	Host-Associated → Plants	2.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.16%
Freshwater	Environmental → Aquatic → Freshwater	29.11%
Peat	Environmental → Terrestrial → Peat	9.49%
Sediment	Environmental → Aquatic → Sediment	5.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	28.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.49%
Loam	Environmental → Terrestrial → Soil → Loam	8.23%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.53%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.95%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.46%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	10.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.06%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.16%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.53%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.27%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.63%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	13.29%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	10.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	10.13%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.33%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.43%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.80%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.80%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.16%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.16%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	2.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.27%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.27%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.27%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.27%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.63%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.63%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.63%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.63%
Peat	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat	0.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.63%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.63%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000574	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004972	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 42 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005875	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental	Open in IMG/M
3300025480	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)	Environmental	Open in IMG/M
3300025496	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes)	Environmental	Open in IMG/M
3300025498	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150 (SPAdes)	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300025507	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028869	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_4	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300029889	Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029956	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2	Environmental	Open in IMG/M
3300029998	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N1_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1357J11328_100498751	3300000574	Groundwater	QTVHGIWFEFRGTVERGEGKKAGDEAYYVLKGTLTENATDEAKKTTSRSREVALKSFPQEVSPAPEKRN*
JGI12659J15293_100064604	3300001546	Forest Soil	ERGEGKNHGDEAFYVLKGILTEDTTDDAKKASSQSHEVALKSFPQGMAPPPAGK*
JGIcombinedJ26739_1002026871	3300002245	Forest Soil	RGEGKNHGDEAFYVLKGILTEDTTDDAKKASSQSHEVALKSFPQGMAPPPAGK*
Ga0062385_109374561	3300004080	Bog Forest Soil	VERGAGKSRGDEAYYVLKGTLVENTTDEAKKTSSRSREVALTSFPQDLATPQAEKK*
Ga0062387_1014558651	3300004091	Bog Forest Soil	RGEGKSQGDEAYYVLKGTLVENTTDDAKKTSSRSRQVALKAFPHDMSR*
Ga0062389_1033961541	3300004092	Bog Forest Soil	TETVHAVWFEFRGMIDRGTGRNPGDEAYYVLKGTLIENTTEETQKTSARSIEVALKSFPQDLSSGQAPTK*
Ga0072325_12483911	3300004972	Peatlands Soil	ERGEGKSRGDEAYYVLKGTLVENTTDEAKKTSSRSQEVALKSFPQDLAPPRPERK*
Ga0070658_108144452	3300005327	Corn Rhizosphere	FAFKGIIDRGEGKNRGDEAYYVLKGTLTENAIDNNKSSSSRSREVAFKSFPQDMAPNAPKD*
Ga0070687_1013368902	3300005343	Switchgrass Rhizosphere	VWFAFKGIIDRGEGKNRGDEAYYVLKGTLTENAIDNNKSSSSRSREVAFKSFPQDMAPNAPKD*
Ga0070710_108979171	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	EFTGTVDRGPGKQPGDEAYYVLNGRLVEHTTGADKKTSSLSREVALKSFPQDMAPSPQKKD*
Ga0070707_1002140791	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GTVERGEGKSRGDEAYYVLKGALVENTSDEAKKTSSHSREVELKSFPQDMAPPQAEKK*
Ga0070698_1006812592	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VHGVSFEFRGTVERGGGKSRGDEAYYVLKGTLIENTTDEAKKTSSRSREVALKSFPQDMAPPQAEKK*
Ga0066699_112166342	3300005561	Soil	ETVHGASFEFRGTIDRGEGKGRGDEAYYVLKGTLVESTTDEAKKTSSRSREVALKSFPQDMAPPREEKK*
Ga0070761_107037063	3300005591	Soil	TVHGVSFAFRGTVKRGEGKNPGDEAYYVLKGILVENLTDSASKTSATSHEVALKSFPQDVSSPRDEKK*
Ga0075293_10201932	3300005875	Rice Paddy Soil	DLGFTTQTVHGGWYEFKGMVERGAGKNPGDEAYYVLKGTLVQNTTDANKKTSAKSREVAFKSFPQDLDTPVQK*
Ga0066795_101435952	3300005938	Soil	KSRSDEAYYVLKGTLIENTTDETKKTASHSREVALKSFPQDASPPPERK*
Ga0075028_1007636371	3300006050	Watersheds	FRGSVERGEGKTSRDEAFYLLKGTLTENSTDANKKTTSHTREVALKSFPQDMSPEPAKRQ
Ga0075029_1000177581	3300006052	Watersheds	SFEFRGTVERGAGKNPGDEAYYVLKGTLIENNMDEGNKTSSHSREVSLKIFPQDLGSNPATNK*
Ga0075017_1002134381	3300006059	Watersheds	EVVHGLSYEFRGTIERGEGKNPGDEAYYLLKGTLIVTTIDSDKKASSRSTHVTLKSFPQDLAPTQAEKKK*
Ga0075015_1007989642	3300006102	Watersheds	TVGRGDGKNPGDEAYYVLKGTLVENTTDEAKKVSSRSLDVAFKSFPQDMSPPAPETK*
Ga0075030_1003190023	3300006162	Watersheds	LAHEFRGRVERGEGKNPGDEAYYVLRGILTENTVDDAKRTSSRSREVALRIFPRDLVPAQGVKK*
Ga0075030_1004838773	3300006162	Watersheds	LAHEFRGRVERGEGKNPGDEAYYVLKGTLTENRVDGEKKTSSRSMEVGLKRFPQDLGPAQGEKK*
Ga0075030_1006890421	3300006162	Watersheds	NHLTFMTEIVHGVSFEFRGTVGRGDGKNPGDEAYYVLKGTLVENTTDEAKKVSSRSLGVAFKSFPQDMSPPAPETK*
Ga0066659_105161751	3300006797	Soil	LDGNQLAFTTETVHGASFEFRGTVDRGEGKSRGDEAYYVLKGTVVENTTDEAKKTSSRSREVALKSFPQDMAPPRE*
Ga0099829_106883641	3300009038	Vadose Zone Soil	TVHGASFEFRGTIDRGEGKSRGDEAYYVLKGSLVENTTDESKKSSSRSRAVALKSFPQDMSPPQAEKK*
Ga0099830_117629791	3300009088	Vadose Zone Soil	VERGEGKSRGDEAYYVLKGTLVENTTDDAKKSSSHSREVALKSFPQDMAPPR*
Ga0116222_15223422	3300009521	Peatlands Soil	LSRASSMATFATETVHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLVENTSDEAKKTSSRSQEVALKSFPQDLAPPRTGRLSVR*
Ga0116218_10043511	3300009522	Peatlands Soil	LTFTTETVQGVSFGFRGTIERGEGKSRGDEAYYVLKGTLVENTTDEVKKTSSHSREVVLKSFPQDVAPAQAEKK*
Ga0116218_11365261	3300009522	Peatlands Soil	TVERGEGKSRGDEAYYVLKGTLVENTTDEAQKTSSRSREVALKSFPQDMAPPQAERK*
Ga0116225_11046342	3300009524	Peatlands Soil	MATFATETVHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLAENTTDEAKKTSSRSQEVVLKSFPQDLAPPRTGRLSVR*
Ga0116225_13043222	3300009524	Peatlands Soil	MATFATETVHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLVENTTDEARKTSSRSREALLKGFPQDLTSPQAEKK*
Ga0116111_10122951	3300009616	Peatland	TVERGEGKSRGDEAYYVLKGTLVDTTTGEAKKTSSRVRQVALKSFPQDMAPPPAERK*
Ga0116133_11026172	3300009623	Peatland	VTSETVRGVWFEFRGTVERGEGKSRSDEAYYVLKGTLVENTIDEAKKNSSHAREVMLKSFPQDLTPPPQPGKK*
Ga0116124_11387462	3300009634	Peatland	RWTVERCEGKSRCDEAYYVLKGTLVENTTDEAKKTSSRSREVALKSFPQDLAPPQDQKM*
Ga0116122_11961481	3300009639	Peatland	TETVHGVSFEFRGTFERGEGKNRGDEAYYVLKGTLVENTTDEAKKTSSRPSEVALKSFPQDMAPHR*
Ga0116120_11717372	3300009641	Peatland	EFRGTVERGEGKSRGAEAYYVLKGTLVENATDEAKKTSSRLREVVLKSFPQDLAYPQSEKK*
Ga0116110_10930213	3300009643	Peatland	GTVERGEGKSRCDEAYYVLKGTLVENTTDEAKKTSSRSREVALKSFPQDLAPPQDQKK*
Ga0116110_11662161	3300009643	Peatland	RGTVERGEGKSRSDEAYYVLKGTLVENTTDEAKKTSYRSQEVALKSFPQDLAPPRAERK*
Ga0116110_11820902	3300009643	Peatland	RGTIERGEGKSRGDEAYYVLKGTLVEKTTDEAKKTSSRSLEVVLKSFPQDLAPAPAEKK*
Ga0116224_100768783	3300009683	Peatlands Soil	DGNQLAFTTETAHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLVENTTDEAKKTSSRSREVALKSFPQDMAPPQAEGK*
Ga0116217_102612962	3300009700	Peatlands Soil	FATETVHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLAENTTDEAKKTSSRSQEVVLKSFPQDLAPPRTGRLSVR*
Ga0116101_11809731	3300009759	Peatland	GKVERGEGKTRADEAFYVLKGTLTENATDNAKKTSSQSHEVALKSFPQNMPPPPPGKQ*
Ga0116134_10490463	3300009764	Peatland	ERGEGKSRGNEAFYVLKGTLVENTIDEAKKTSSHSREVALRSFPQDVAPPQQQKK*
Ga0116219_101163133	3300009824	Peatlands Soil	MATFATETVHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLVENTTDEAKKTSSRSQEVALKSFPQDLAPPRTGRLSVR*
Ga0116223_102453072	3300009839	Peatlands Soil	TVERGEGKSRGDEAYYVLKGTLAENTTDEAKKTSSRSQEVVLKSFPQDLAPPRTGRLSVR
Ga0126379_118119571	3300010366	Tropical Forest Soil	IERGEGKKLGDEAYYVLKGTLTENSTDEAKKTSSRSREVGLKSFPQDLNPDHAERK*
Ga0136449_1029309152	3300010379	Peatlands Soil	ATETVHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLVENTTDEAKKTSSRTQEVALKSFPQNLTPGAEKPSVR*
Ga0150983_151221761	3300011120	Forest Soil	QLSFATEIVKGISFDFHGTIERGDGKNRPDEAYYVLRGSLVENTIDETKKTSFRSLQVVLKSFPQDVAPSPAEKK*
Ga0137363_107909982	3300012202	Vadose Zone Soil	ERGEGKSRGDEAYYVLKGTLVENTSDEAKKTSSHSREVALKSFPQDMAPPQAEKK*
Ga0137363_108385271	3300012202	Vadose Zone Soil	GEGKGRGDEAYYVLKGTLVESTTDEAKRTSSRSREVALKSFPQAMSPPREEKK*
Ga0137362_104006603	3300012205	Vadose Zone Soil	FEFRGTVERGEGKSRGDEAYYVLKGTLVENTSDEAKKTSSHSREVALKSFPQDMAPPQAEKK*
Ga0137379_108900312	3300012209	Vadose Zone Soil	FEFRGTVERGEGKKTGDEAYYVLKGTLTENATDEAKKTTSRSREVALKSFPQDMSPARP*
Ga0137377_111316481	3300012211	Vadose Zone Soil	DGNQLAFTTETVHGASFEFRGTVDRGEGKGRGDEAYYVLKGTLIENTTDEAKKTSSRSREVALKSFPQDMVPPREEKK*
Ga0137361_108750271	3300012362	Vadose Zone Soil	EFRGTIDRGEGKGRGDEAYYVLKGTLVENTTDEAKKTSSRSREVALKSFPQDMAPPREQKE*
Ga0150984_1233690292	3300012469	Avena Fatua Rhizosphere	GVWFAFKGIIDRGEGKNRGDEAYYVLKGTLTENAIDNNKSSFSRSREVALKSFPQEMTPNAPKD*
Ga0137358_107951631	3300012582	Vadose Zone Soil	VERGEGKNRADEAYYVLKGTLIENTNDESKKTSSHSREVALKSFPQDLSPPPAKN*
Ga0137398_102620312	3300012683	Vadose Zone Soil	VHGASFEFRGTVDRGEGKGRGDEAYYVLKGTVVENTTDEAKKTSSRSRDVALKSFPQDMAPPQAEKR*
Ga0137396_107573412	3300012918	Vadose Zone Soil	EGKSRGDEAYYMLKGTLVENTIDEAKKSSSRSREVALKSFPQDMAPPQGQRE*
Ga0137419_109040142	3300012925	Vadose Zone Soil	DGNQLAFTTETVHGASFEFRGTVDRGDGKSRGDEAYYVLKGTLVENTTDEAKKTSSRSREVALKSFPQDMAPPQEQKK*
Ga0137419_114952001	3300012925	Vadose Zone Soil	DTVHGASFEFQGTVERGDGKSRGDEAYYVLKGTLVESTIDQAKKTSSRTREVALKSFPQDMAPPREQKK*
Ga0164304_110908101	3300012986	Soil	HGVWFAFKGIIDRGEGKNRGDEAYYVLKGTLTENAIDNNKSSSSRSREVAFKSFPQDMAPNAPKD*
Ga0120127_101515662	3300013503	Permafrost	LTFTTQLVHGVSFEFQGTIERGPGKNPGDEGYYVLKGRLIETTSDEANKTASHSREVAFKSFPQDLTR*
Ga0181524_103317941	3300014155	Bog	QLAFTTETVHGLSYEFRGTIERGEGKSRGDEAYYVLKGTLVENRTDEAKKTSSRSSQVALKGFPQDMAPPQAEKK*
Ga0181524_103885802	3300014155	Bog	GKSRAGEAYYVLKGTLVENTTGEAKKTSSHSREVVLKSFPQDLAPPQTEKKQAASP*
Ga0181538_100162891	3300014162	Bog	TVQGVSFEFRGTVERGEGKNRGDEAYYVLQGTLVENVTDAAKKTSSRSIEVALKSFPQDLTPPQAEKK*
Ga0182019_100220851	3300014498	Fen	GVWFEFRGTVERGEGKRRSDEAYYMLKGTLVENTTNEAKKTPSQSREVALKSFPQDVAPPQAEKK*
Ga0182024_111158781	3300014501	Permafrost	FHGTIERGEGKNHGDEAFYVLKGTLTVDATDDVKKASSQSHEVALKSFPQNMAPPPAGK*
Ga0182021_117499912	3300014502	Fen	FSTETVRGVWFEFRGAVERGEGKSRSDEAYYVLEGTLVENTIDEAKKTASRSREVALKSFPQDMAPPPADKK*
Ga0181536_102322302	3300014638	Bog	FEFRGTVERGEGKSRSDEAYYVLKGTLVENTTDEAKKTSSRSQEVALKSFPQDLAPPRPERK*
Ga0181525_102038381	3300014654	Bog	KGISFDFRGTIERGEGKSRPDEAYYVLTGTLVEYTIDDTKKTSSRSLQVVLKSFPQDVAPSPAEKK*
Ga0137418_107364752	3300015241	Vadose Zone Soil	FEFHGTIERGDGKKSGDEGYYALKGTLTENSTDEAKKTTSRSREVALASFPQDVSPAASDKN*
Ga0137412_106300302	3300015242	Vadose Zone Soil	TTQAVHGIWFEFRGTIERGDGKNMGDEAYYVLRGTLTENTADEAKKTTSHSREVLLKSFPQDASPAKN*
Ga0181511_10156513	3300016702	Peatland	RGEGKSRGDEAYYSLKGTLVENTTDEAKKTSSRSSQVELKSFPQDMTPPEAEKK
Ga0187850_102827741	3300017941	Peatland	TETVHGVSFEFRGTVERGEGKSRSDEAYYVLKGTLVENTTDEAKKTSSRSQEVALKSFPQDLAPPRPERK
Ga0187879_105995181	3300017946	Peatland	LAFATETVHGVSFEFRGTVERGEGKSRSDEAYYVLKGTLVENTTDEAKKTSSRSQEVALKSFPQDLAPPRPERK
Ga0187879_107312062	3300017946	Peatland	GEGKSRSDEAYYVLKGTLVENTIDEAKKNSSHAREVMLKSFPQDLTPPPQPGKK
Ga0187817_102319783	3300017955	Freshwater Sediment	HGVSFEFRGTVERGEGKNPGDEAYYVLKGILIENITDETKKTSSRSREVALKSFPQDASPPQTEKK
Ga0187891_11797763	3300017996	Peatland	EFRGTVERGDGKSRGEEGYYILRGTLIENTTDEAKKTSSRSREVALRSFPQDVVPPQEQK
Ga0187870_11581061	3300017998	Peatland	VSFEFRGTVERGEGKSRGAEAYYVLKGTLVENATDEAKKTSSRLREVVLKSFPQDLAYPQSEKK
Ga0187868_11633021	3300018002	Peatland	TLDGNRLGFSTETVQGVSYEFRGTVERGEGKSRGDEAYYVLKGTLVENTPGDTKKTTSDSRQIVLESFPQDLALPPAEKK
Ga0187804_100999573	3300018006	Freshwater Sediment	TVHGVAFEFRGTVERGGGKSRSDEAYYVLKGILIETITDETKKTSSRSREVALRSFPQDMAAPPADGK
Ga0187884_101212812	3300018009	Peatland	QFQGTVEQGEGKSRADEAYYVLKGTLVENTTDAAKKISSRSVDVLLRSFPQDLAPPPPPTERK
Ga0187874_102776742	3300018019	Peatland	ETVHGVSFEFRGTFERGEGKNRGDEAYYVLKGTLVENTTDEAKKTSSRSSEVALKSFPQDMAPPPAEKK
Ga0187874_103285652	3300018019	Peatland	FEFQGTIERGEGKNHNEEAFYVLKGTLIEDTTDTARKTSSQSHEVMLKSFPQDMAPPPEG
Ga0187861_102377162	3300018020	Peatland	ETVKGVSFEFRGTIERGEGKSRGDEAYYVLKGTLVEKTTDEAKKTSSRSLEVVLKSFPQDLAPAPAEKK
Ga0187855_109460831	3300018038	Peatland	IERGEGKNRTDEAYYVLKGTLVEKTTDEAKKTSSHSHEVAWRSFPQDLAPPHTQNKTQDK
Ga0187871_101599301	3300018042	Peatland	EFHGTIERGEGKIRSDEGYYVLKGTLVENTIDTAKKTSSRALDVALKSFPQDLPPPQAGK
Ga0187887_101822982	3300018043	Peatland	SYEFRGTVERGEGKNAGDEAYYVLKGTLVENAIDQSKKTTSNSSAVVFKSFPRDMAHPVAEKK
Ga0187859_105293502	3300018047	Peatland	GVSFEFRGTIERGQGKNRADEAYYLLTGTLVEKTTDEAKKTSSHSHEVAWRSFPQDLAPPHTQNKTQDK
Ga0187772_106731231	3300018085	Tropical Peatland	HLAFTTEAMGGVAFEFRGTVERGEGKSRGDEAYYVLKGTLVENITDEAKKTSSRSQEVALRSFPQNLTPVAEKPSAK
Ga0187769_106153161	3300018086	Tropical Peatland	GVSFEFRGTVERGEGKDLGDEAYYVLRGTLVENSSDEAQKTSPRSRQVELKSFPQDLSP
Ga0066669_123926932	3300018482	Grasslands Soil	QVVHGVSFEFRGTVDRGDGKKTGDEAYYVLKGTLTETATDEAKKTSSRTREVALKSFPQDMSPPRP
Ga0187852_14141581	3300019082	Peatland	TVERGEGKGRGDEAYYVLKGTLAENITGDTKETSSHSRQIVFRSFPQDLAPAPAEKK
Ga0187798_12144142	3300019275	Peatland	LAYEFRGTVERGEGKNPGDEAYYVLKGTLIENTMDNTKKVSSRAMEVALKMFPQDLGSGPGQKK
Ga0187800_15443952	3300019278	Peatland	VSFEFHGAVERGEGKNPGDEAYYVLRGTLIENSMDEGKKTSSRTRQVALKMFPRDLGGKKEKK
Ga0187800_16070623	3300019278	Peatland	LTFTTETVHGLAYEFRGTVERGEGKNPGDEAYYVLKGTLIENTMDNTKKVSSRSMEVALKMFPQDLGSGPGQKK
Ga0187797_15097651	3300019284	Peatland	NRLTFATETVHGLAYEFRGAVERGEGKNPGDEAYYVLKGTLIENTMDNTKKVSSRAMEVALKMFPQDLGSGPGQKK
Ga0210406_112035922	3300021168	Soil	GEGKSPGTEAYYVLKGTLVENATDESKKVSSHSREVALKSFPQDMAPPAAEGK
Ga0210385_114125961	3300021402	Soil	RGTIDRGEGKNRGDEAYYVLKGTLVDNTIDEAKKASSHSSEVVLRSFPQNLASPQPEKK
Ga0210387_110839301	3300021405	Soil	VHGISFEFHGTIDRGEGKSRGDDAFYILKGTLTEKAIDEAKKSSSHAREVALKSFPQDVN
Ga0210394_104863741	3300021420	Soil	ARLDGDQLTFATETVHGKSFEFHGTIERGEGKNHGDEAFYVLKGILTEDTTDDAKKASSRSHEVALKSFPQDMAPPPAGK
Ga0210391_100281331	3300021433	Soil	SKLDGNQLSFATEIVKGISFDFHGTIERGDGKNRPDEAYYVLRGSLVENTIDETKKTSSRSLQVVLKSFPQDVAPSPAEKK
Ga0210392_101158061	3300021475	Soil	FTTEMVHGISFEFQGTIERGEGKNRGDEAFYVLKGTLTENSMDAAKKTSAHAREVALKSFPLSMDSPEAGNK
Ga0210409_103335941	3300021559	Soil	ETVHGASFEFRGTVDRGEGKSRSDEAYYVLKGTLVENTTDEAKKTSSRSREVALKSFPQDMAPPRK
Ga0242662_102551662	3300022533	Soil	VHGASFEFRGTIDRGEGKSRGDEAHYVLKGTLVENTTDESKKSSSRSREVALKSF
Ga0208034_10184333	3300025442	Peatland	VERGEGKSRGDEAYYVLKGTLVDTTTGEAKKTSSRVRQVALKSFPQDMAPPPAERK
Ga0208688_10024461	3300025480	Peatland	HGVSFEFRGTVERGEGKSRCDEAYYVLKGTLVENTTDEAKKTSSRSREVALKSFPQDLAPPQDQKK
Ga0208191_10188961	3300025496	Peatland	TETVHGVSFEFRGTFERGEGKNRGDEAYYVLKGTLVENTTDEAKKTSSRPSEVALKSFPQDMAPHR
Ga0208191_10503341	3300025496	Peatland	TVERGEGKSRSDEAYYVLKGTLVENTTDEAKKTSSRSQEVALKSFPQDLAPPRPERK
Ga0208819_10887751	3300025498	Peatland	RGTVERGEGKSRSDEAYYVLKGTLVENTTDEAKKTSSRTQEVALKSFPQDLAPPRAERK
Ga0208686_10133661	3300025500	Peatland	GEGKSRGDEAYYVLKGTLVENSTDEAKRTSSRSREVALKSFPQDLAPPSAEKK
Ga0208188_10933102	3300025507	Peatland	RGTIERGEGKSRGDEAYYVLKGTLVEKTTDEAKKTSSRSLEVVLKSFPQDLAPAPAEKK
Ga0207705_106314771	3300025909	Corn Rhizosphere	WFAFKGIIDRGEGKNRGDEAYYVLKGTLTENAIDNNKSSSSRSREVAFKSFPQDMAPNAPKD
Ga0207646_116327551	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VFTTQTVHGIWFEFHGTVDRGEGKKTGDEAYYVLKGTLTENATDEAKKTTSRSREVTLKSFPQDVSPAPTKEN
Ga0209153_10456751	3300026312	Soil	GIIDRGEGKNRDDEAYYVLKGTLTENAIDNNKSSSSRSREVALKSFPQDMTPNAPKD
Ga0257177_10502522	3300026480	Soil	VHGVSFEFRGTIERGEGKNRSDEAYYVLRGTLVENTSDEAKKTSSHSREVALKSFPQDMAPPQAEKK
Ga0257160_10699561	3300026489	Soil	DTVHGVSFEFHGTVERGEGKNRADEAYYVLKGTLIENTNDESKKTSSRSREVALKSFPQDLSPPPAKN
Ga0209648_104565122	3300026551	Grasslands Soil	EIVHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLVENTSDEAKKTSSHSREVALKSFPQDMAPPQAEKK
Ga0209648_106554391	3300026551	Grasslands Soil	EFRGTIDRGEGKSRGDEAYYVLKGTLVENTTDESKKSSSRSRAVALKSFPQDMSPPQAEK
Ga0179587_108318782	3300026557	Vadose Zone Soil	VERGDGRKSGDEAYFVLKGTLIENSTDEAKKTTSRSREVALKSFPQDVSPAGR
Ga0209220_11464692	3300027587	Forest Soil	TTETVHGASFEFRGTIDRGEGKSRGDEAYYVLKGTLVENTTDEAKKSSSRSREVALKSFPQDMSPPQEQKK
Ga0209733_11564811	3300027591	Forest Soil	IDRGEGKSRGDEAYYVLKGTLVENTTDEAKKSSSRSREVALKSFPQDMASPREQKK
Ga0208324_10044421	3300027604	Peatlands Soil	LTFTTETVQGVSFGFRGTIERGEGKSRGDEAYYVLKGTLVENTTDEVKKTSSHSREVVLKSFPQDVAPAQAEKK
Ga0208565_10789102	3300027662	Peatlands Soil	KSRGDEAYYVVKGTLVENTTDEAKKTSSRSQEVALKSFPQDLTPPGAERLRVK
Ga0208981_10652353	3300027669	Forest Soil	DANQLAFTTDTVHGASFEFRGTIDRGEGKSRGDEAYYVLKGTLVENTTDEAKKTSSRSREVALKSFPQDMAPPQAQKK
Ga0209118_10386791	3300027674	Forest Soil	FEFQGTIDRGEGKSRGDEAYYVLKGTLVENTTDEAKKTSSRSREVALKSFPQDMASPREQKK
Ga0209038_101419762	3300027737	Bog Forest Soil	ETVQGVSFEFRGTVERGEGKSRGDDAYYVLKGTLVENTTDEAKKTSSRSLEVVLKSFPQDLAPAQTEKK
Ga0209040_103083182	3300027824	Bog Forest Soil	NQIAFTTETVNGVSYEFRGTIERGEGKNRGDEDYYALRGTLVETTTDEVKKTSSRSLDVVLKSFPQDLDPQAEKK
Ga0209517_104017042	3300027854	Peatlands Soil	FEFRGTVERGEGKSRRDEAYYVLEGTLVENTTDEAKKTSSRSREVVLKSFPQDLAPAQAEKK
Ga0209517_106348491	3300027854	Peatlands Soil	ETVRGVSFEFRGTVERGTGKSRADEAYYVLHGTLLEHTTDEIKKTSSHSREVVLKSFPQDLAPPAQPEKK
Ga0209415_104254942	3300027905	Peatlands Soil	GVSFEFRGTVERGEGKSRGDEAYYVLKGTLAENTTDEAKKTSSRSQEVVLKSFPQDLAPPRTGRLSVR
Ga0209415_107570982	3300027905	Peatlands Soil	TETVHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLVENTSDEAKKTSSRSQEVALKSFPQDLAPPRTGKLSVR
Ga0209698_100025631	3300027911	Watersheds	LAHEFRGRVERGEGKNPGDEAYYVLRGILTENTVDDAKRTSSRSREVALRIFPRDLVPAQGVKK
Ga0209698_113518262	3300027911	Watersheds	VHGISFEFRGAFERGEGRNPGDEAYYVLKGTLVENTSDEAQKTSSRSREVALRSFPRDLSPPPAQKE
Ga0302263_103018011	3300028869	Fen	VERGEGKKSGDEAFYVLKGTLTENSTDDSKKTTSRPREVALKSFPQDVSPAPAKRE
Ga0302154_104593251	3300028882	Bog	MSFDFRGTVERGAGVNPGDEEYYVLKGTLVEKTTDEVKKTSSRSLEVALKSFPRDLASPEADKK
Ga0246001_10061401	3300029889	Peat	VERGEGKSRSDEAYYVLKGTLVENTTDEAKKTSSRTQEVALKSFPQDLAPPRAERK
Ga0311343_101542861	3300029953	Bog	SYDFRGTVERGEGKNAGDEAYYVLKGTLVENAIDQSKKTTSNSSAVVFKGFPRDMAHPVAEKK
Ga0311331_114256072	3300029954	Bog	FTSESVHGVSFEFKGTVERGAGKSRGDEGYYVLKGTLVENTADEAKKTSSHSREVVLKSFPQDLAPPPEKK
Ga0302150_102646151	3300029956	Bog	DAVHGMSFDFRGTVERGAGVNPGDEEYYVLKGTLVEKRTDEVKKTSSRSLEVALKSFPRDLASPEAEKK
Ga0302271_101261901	3300029998	Bog	HGVWFEFRGSVERGEGKKSGDEAFYVLKGTLTENSTDDSKKTTSRPREVALKSFPQDVSPAPAKRE
Ga0311353_101050931	3300030399	Palsa	QGVWYEFRGTVERGEGKSRGDEAYYALKGTLVENTTDEAKKTSSRSSEVALKSFPRDLAPPPQQQKK
Ga0311355_106389961	3300030580	Palsa	FTTKTVQGVWYEFRGTVERGEGKSRGDEAYYALKGTLVENTTDEAKKTSSRSSEVALKSFPRDLAPPPQQQKK
Ga0316363_101424922	3300030659	Peatlands Soil	ERGEGKSRGDEAYYVLKGTLAENTTDEAKKTSSRSQEVVLKSFPQDLAPPRTGRLSVR
Ga0310039_103047872	3300030706	Peatlands Soil	MATFATETVHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLVENTTDEAKKTSSRSQEVALKSFPQDLAPPRTGRLSVR
Ga0310038_100323231	3300030707	Peatlands Soil	QLAFATETVHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLVENTTDEAKKTSSRSQEVALKSFPQDLAPPRTGRLSVR
Ga0310038_101548471	3300030707	Peatlands Soil	SSMATFATETVHGVSFEFRGTVERGEGKSRGDEAYYVLKGTLAENTTDEAKKTSSRSQEVVLKSFPQDLAPPRTGRLSVR
Ga0302180_103853091	3300031028	Palsa	TTKPVQGVTFEFRGKIERGEGKNRDDEAFYLLQGTLVEKTTDETKKTSSRSRDVALKSFPRNLTSPQTQNK
Ga0302325_113398092	3300031234	Palsa	QLAFTTKTVQGVWYEFRGTVDRGEGKSRADEAYYVLKGTLIENTTDEAKKTSSQSSEVALKSFPQDLAPPQPQKK
Ga0302324_1011602341	3300031236	Palsa	EYRGTIERGEGKSRPDEAYYVLTGTLVEYTIDDTKKTSSRSLQVVLKSFPQDVAPSPAEK
Ga0302324_1018972681	3300031236	Palsa	TVQGVWYEFRGTVERGEGKSRGDEAYYTLKGTLIENTTDDAKKTSSQSSDVALKSFPQDLAPPPQQPKK
Ga0265339_104481212	3300031249	Rhizosphere	TKTVHGVSYEFRGTVDRGASQNPGEEAYYVLRGTLVVNTIDDAKKTSSHSQEVALKSFPQDVNPTPAEKK
Ga0302140_103333731	3300031261	Bog	LSFTTDAVHGVSYDFRGTVERGDGKNAGDEGYYVLKGTLVENTIDQSKKTTSNSSAVVFKGFPREMAPPVAEKK
Ga0170818_1099792311	3300031474	Forest Soil	EGKNRADEAYYVLKGTLIENTNDESKKTSSRSQEVALKSFPKDLSPPPAKN
Ga0310686_1002068513	3300031708	Soil	SFEFHGTIERGEGKTRGDEAFYLLKGTLTENATDNANKTSSQSHQVALKSFPQDMAPPPSDKQ
Ga0310686_1132560433	3300031708	Soil	ETVRGISFEFRGTVERGEGKSRGDEAYYVLKGTLVENTIDEAKKNSSRLLDVVLKSFPQNAAPAQAEKK
Ga0307475_105590231	3300031754	Hardwood Forest Soil	FRGTVDRGEGKSRSDEAYYVLKGTLVENTTDEAKKTSSRSREVALKSFPQDMSPPRK
Ga0311367_121580461	3300031918	Fen	VHGIWFEFRGTVGRGDGKKAGDEAYYVLRGTLIENFTDDAKKTTSHSREVGLKSFPQDMSPEVPAKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042232

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences