Metagenome / Metatranscriptome Family F042369

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042369
Family Type	Metagenome / Metatranscriptome
Number of Sequences	158
Average Sequence Length	41 residues
Representative Sequence	MNYTWLYAIGVVLLALFLPVFSYLTLIYRELGRMTTGRVHE
Number of Associated Samples	133
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.01 %
% of genes near scaffold ends (potentially truncated)	99.37 %
% of genes from short scaffolds (< 2000 bps)	90.51 %
Associated GOLD sequencing projects	126
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.101 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.418 % of family members)
Environment Ontology (ENVO)	Unclassified (27.848 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.468 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.72% β-sheet: 0.00% Coil/Unstructured: 49.28%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF02130	YbeY	72.15
PF02562	PhoH	21.52
PF13472	Lipase_GDSL_2	1.90
PF14685	Tricorn_PDZ	0.63
PF02371	Transposase_20	0.63
PF01595	CNNM	0.63
PF00571	CBS	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG0319	ssRNA-specific RNase YbeY, 16S rRNA maturation enzyme	Translation, ribosomal structure and biogenesis [J]	72.15
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	21.52
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	21.52
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.10 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.10 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.10 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	76.58 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	36.71 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	19.62 %
Unclassified	root	N/A	1.90 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.71 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	17.72 %
Unclassified	root	N/A	1.90 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	17.72 %
Unclassified	root	N/A	1.90 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	17.72 %
Unclassified	root	N/A	1.90 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	17.72 %
Unclassified	root	N/A	1.90 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10442607	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300001686\|C688J18823_10523561	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M
3300002245\|JGIcombinedJ26739_100512551	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1077	Open in IMG/M
3300004092\|Ga0062389_103434424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300004268\|Ga0066398_10108850	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300005167\|Ga0066672_10615840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300005176\|Ga0066679_10258842	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1123	Open in IMG/M
3300005365\|Ga0070688_101548031	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005531\|Ga0070738_10090946	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1665	Open in IMG/M
3300005531\|Ga0070738_10278769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300005541\|Ga0070733_10458525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300005542\|Ga0070732_10766609	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300005552\|Ga0066701_10084864	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1823	Open in IMG/M
3300005586\|Ga0066691_10102604	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1607	Open in IMG/M
3300005591\|Ga0070761_10306255	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300005598\|Ga0066706_10657881	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300005950\|Ga0066787_10071790	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300006354\|Ga0075021_11088970	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300006804\|Ga0079221_11464106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300006854\|Ga0075425_100037497	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5401	Open in IMG/M
3300006903\|Ga0075426_10447869	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300006904\|Ga0075424_101590175	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300007255\|Ga0099791_10255630	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300007255\|Ga0099791_10441190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300007265\|Ga0099794_10410739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300009012\|Ga0066710_101638456	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300009038\|Ga0099829_10028834	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3931	Open in IMG/M
3300009038\|Ga0099829_10727416	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300009038\|Ga0099829_11264573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300009088\|Ga0099830_11000114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300009090\|Ga0099827_10548697	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300009090\|Ga0099827_10644805	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300009545\|Ga0105237_10176583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2136	Open in IMG/M
3300009545\|Ga0105237_10574717	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300009672\|Ga0116215_1407043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300010043\|Ga0126380_11258075	All Organisms → cellular organisms → Bacteria → Acidobacteria	641	Open in IMG/M
3300010043\|Ga0126380_11987738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300010046\|Ga0126384_10156548	All Organisms → cellular organisms → Bacteria → Acidobacteria	1760	Open in IMG/M
3300010048\|Ga0126373_10661425	Not Available	1101	Open in IMG/M
3300010322\|Ga0134084_10344151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300010333\|Ga0134080_10614271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300010336\|Ga0134071_10368009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300010339\|Ga0074046_10683163	All Organisms → cellular organisms → Bacteria → Acidobacteria	604	Open in IMG/M
3300010358\|Ga0126370_10372180	Not Available	1163	Open in IMG/M
3300010360\|Ga0126372_10281616	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1448	Open in IMG/M
3300010360\|Ga0126372_13106626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300010376\|Ga0126381_103868700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300010398\|Ga0126383_10424861	All Organisms → cellular organisms → Bacteria → Acidobacteria	1372	Open in IMG/M
3300010398\|Ga0126383_11081919	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300011269\|Ga0137392_10674681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	856	Open in IMG/M
3300011270\|Ga0137391_10918171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300012096\|Ga0137389_11192693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300012189\|Ga0137388_10027962	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4351	Open in IMG/M
3300012202\|Ga0137363_10459701	All Organisms → cellular organisms → Bacteria → Acidobacteria	1066	Open in IMG/M
3300012202\|Ga0137363_11413593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300012203\|Ga0137399_11353526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300012205\|Ga0137362_11341629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300012209\|Ga0137379_11436192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300012210\|Ga0137378_11677404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300012362\|Ga0137361_11515445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300012363\|Ga0137390_10458116	All Organisms → cellular organisms → Bacteria → Acidobacteria	1251	Open in IMG/M
3300012363\|Ga0137390_10891388	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300012582\|Ga0137358_10250429	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1205	Open in IMG/M
3300012582\|Ga0137358_10453083	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300012582\|Ga0137358_10683110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300012582\|Ga0137358_11099311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300012923\|Ga0137359_10006660	All Organisms → cellular organisms → Bacteria	9578	Open in IMG/M
3300012925\|Ga0137419_10270135	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1289	Open in IMG/M
3300012927\|Ga0137416_11264402	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300012927\|Ga0137416_11775599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300015054\|Ga0137420_1330383	All Organisms → cellular organisms → Bacteria → Acidobacteria	2254	Open in IMG/M
3300015241\|Ga0137418_10213278	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1661	Open in IMG/M
3300015264\|Ga0137403_10444938	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1171	Open in IMG/M
3300015358\|Ga0134089_10526263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300015373\|Ga0132257_101804671	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300015374\|Ga0132255_104871166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300016270\|Ga0182036_11638692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300016357\|Ga0182032_11159129	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300016371\|Ga0182034_11044896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300016404\|Ga0182037_10638158	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300016404\|Ga0182037_11399647	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300017961\|Ga0187778_11079609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300017975\|Ga0187782_10352441	All Organisms → cellular organisms → Bacteria → Acidobacteria	1114	Open in IMG/M
3300018006\|Ga0187804_10028897	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2075	Open in IMG/M
3300018085\|Ga0187772_10261162	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1179	Open in IMG/M
3300019284\|Ga0187797_1033431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300019999\|Ga0193718_1015055	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1714	Open in IMG/M
3300020010\|Ga0193749_1042554	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300020199\|Ga0179592_10259484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300020579\|Ga0210407_10177805	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1648	Open in IMG/M
3300021170\|Ga0210400_10753148	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300021171\|Ga0210405_10085224	All Organisms → cellular organisms → Bacteria	2490	Open in IMG/M
3300021171\|Ga0210405_10086459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2472	Open in IMG/M
3300021180\|Ga0210396_11384116	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300021181\|Ga0210388_10690093	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	890	Open in IMG/M
3300021372\|Ga0213877_10306143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300021401\|Ga0210393_10608578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300021405\|Ga0210387_11786227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300021478\|Ga0210402_11006695	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300021478\|Ga0210402_11374726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300021559\|Ga0210409_10232676	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1671	Open in IMG/M
3300021560\|Ga0126371_10750696	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300021560\|Ga0126371_12704494	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300022522\|Ga0242659_1029612	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300022717\|Ga0242661_1103145	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300024179\|Ga0247695_1072113	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300024227\|Ga0228598_1020443	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1304	Open in IMG/M
3300025625\|Ga0208219_1098154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300025914\|Ga0207671_10940739	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300025915\|Ga0207693_10033110	All Organisms → cellular organisms → Bacteria → Acidobacteria	4079	Open in IMG/M
3300025917\|Ga0207660_10674838	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300025934\|Ga0207686_11018876	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300026088\|Ga0207641_10435101	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1265	Open in IMG/M
3300026330\|Ga0209473_1291406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300026377\|Ga0257171_1020583	All Organisms → cellular organisms → Bacteria → Acidobacteria	1111	Open in IMG/M
3300026469\|Ga0257169_1083371	Not Available	523	Open in IMG/M
3300026551\|Ga0209648_10251349	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1309	Open in IMG/M
3300026557\|Ga0179587_10164428	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1389	Open in IMG/M
3300027069\|Ga0208859_1033781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300027605\|Ga0209329_1141653	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300027643\|Ga0209076_1071424	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300027846\|Ga0209180_10304107	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300027895\|Ga0209624_10025396	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3755	Open in IMG/M
3300027898\|Ga0209067_10218777	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1028	Open in IMG/M
3300027898\|Ga0209067_10333514	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300027908\|Ga0209006_11441136	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300027911\|Ga0209698_10191642	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1657	Open in IMG/M
3300028047\|Ga0209526_10304983	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1077	Open in IMG/M
3300028145\|Ga0247663_1097464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300030707\|Ga0310038_10497681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300031122\|Ga0170822_13015970	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300031231\|Ga0170824_104668295	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300031715\|Ga0307476_11147015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300031718\|Ga0307474_10842411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300031736\|Ga0318501_10405301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300031781\|Ga0318547_10971209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300031820\|Ga0307473_11217196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300031823\|Ga0307478_10205815	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1585	Open in IMG/M
3300031823\|Ga0307478_10442578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1080	Open in IMG/M
3300031879\|Ga0306919_11365681	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300031912\|Ga0306921_10397801	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1608	Open in IMG/M
3300031942\|Ga0310916_11211815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300031946\|Ga0310910_10087407	All Organisms → cellular organisms → Bacteria → Acidobacteria	2288	Open in IMG/M
3300031962\|Ga0307479_10064166	All Organisms → cellular organisms → Bacteria → Acidobacteria	3540	Open in IMG/M
3300031962\|Ga0307479_12164852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300032041\|Ga0318549_10107309	All Organisms → cellular organisms → Bacteria → Acidobacteria	1222	Open in IMG/M
3300032052\|Ga0318506_10490132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300032054\|Ga0318570_10052275	All Organisms → cellular organisms → Bacteria → Acidobacteria	1699	Open in IMG/M
3300032059\|Ga0318533_10303396	All Organisms → cellular organisms → Bacteria → Acidobacteria	1159	Open in IMG/M
3300032180\|Ga0307471_101588232	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300032180\|Ga0307471_101633508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300032180\|Ga0307471_102322596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300032180\|Ga0307471_102491201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300032261\|Ga0306920_100446060	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1923	Open in IMG/M
3300032783\|Ga0335079_10525489	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1259	Open in IMG/M
3300032898\|Ga0335072_10068631	All Organisms → cellular organisms → Bacteria	4668	Open in IMG/M
3300032954\|Ga0335083_10070900	All Organisms → cellular organisms → Bacteria → Acidobacteria	3559	Open in IMG/M
3300032955\|Ga0335076_10706997	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.04%
Host-Associated	Host-Associated	6.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.24%
Plants	Host-Associated → Plants	6.96%
Aquatic	Environmental → Aquatic	3.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.06%
Sediment	Environmental → Aquatic → Sediment	2.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.90%
Freshwater	Environmental → Aquatic → Freshwater	1.27%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.68%
Loam	Environmental → Terrestrial → Soil → Loam	8.23%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.53%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.27%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.11%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.63%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.63%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.63%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.53%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.53%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.53%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.27%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.27%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.27%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.63%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.63%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.63%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.63%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.63%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.63%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025625	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_104426071	3300001593	Forest Soil	MLGTWAFVGSVLVLALGLPIFSYLTLIYRELGRMST
C688J18823_105235612	3300001686	Soil	MKVYFWAYALGTVLLALGLPIFSYLTLIYRELGRMTTGKVH
JGIcombinedJ26739_1005125513	3300002245	Forest Soil	VKYFFWAYTIATVLLALGLPIFSYLTLIYRELGRMTTGRI
Ga0062389_1034344242	3300004092	Bog Forest Soil	VKVYFWAYTTGTLLLALGLPIFSYLTLIYRELGRMTTGRVHAHLD
Ga0066398_101088502	3300004268	Tropical Forest Soil	VSGYSWLFALGVVLLASFLPVYSYLALIYRELGRMTTGPVHE
Ga0066672_106158403	3300005167	Soil	MNLSWLYALSVVLVAFTLPIFSYLTLIYRELGRMTTGRIHMH
Ga0066679_102588421	3300005176	Soil	MNLGWLYAFSVVLVAFTLPIFSYLTLIYRELGRMTTGRIHMH
Ga0070688_1015480311	3300005365	Switchgrass Rhizosphere	VSGYTWLFALGVVLLASFLPVYSYLALIYRELGRMTTGPVHEHLDIFEAE
Ga0070738_100909461	3300005531	Surface Soil	MFRWAYALELLFLVLSLPVFSYLTLIYRELGRMTTGRVHEHL
Ga0070738_102787691	3300005531	Surface Soil	MFSWAYALELLFLVLSLPVFSYLTLIYRELGRMTTGRVHEHL
Ga0070733_104585253	3300005541	Surface Soil	MQGIWETWAFVGSVLVLALGLPIFSYLTLIYRELGRMTTGRVH
Ga0070732_107666091	3300005542	Surface Soil	MNPLASYSWIYALGVVMLGVGLPIFSYVTLIYRELGRMNTGRIHEHLEI
Ga0066701_100848643	3300005552	Soil	MYLSWIYALSVVLVGLTLPIFSYLTLIYRELGRMTTGRVHEHL
Ga0066691_101026043	3300005586	Soil	MMNLGWLYALSVVLIGFTLPIFSYLTLIYRELGRMTTGRV
Ga0070761_103062553	3300005591	Soil	MNTFRWVYVLGVVLLAFGLPIFSYLTLIYRELGRM
Ga0066706_106578813	3300005598	Soil	VNGYSWLFVLGVVLLALFLPVYSYLALIYRELGRMTTGPVHEHLDI
Ga0066787_100717902	3300005950	Soil	VTFSWLFTLGILVLAVGLPIFSYLALIYRELGRMTTGRIHEHLEIFE
Ga0075021_110889702	3300006354	Watersheds	MNYTWLYAIGVVLLALFLPVFSYLTLIYRELGRMTTGRVHE
Ga0079221_114641061	3300006804	Agricultural Soil	MNPLASYSWIYALGVVMLGVGLPIFSYLTLIYRELGRMNT
Ga0075425_1000374971	3300006854	Populus Rhizosphere	MSGYTWLFALGVLLLASFLPVYSYLALIYRELGRM
Ga0075426_104478693	3300006903	Populus Rhizosphere	MSGYTWLFALGVLLLASFLPVYSYLALIYRELGRMTTGPVHEHLDIFEA
Ga0075424_1015901751	3300006904	Populus Rhizosphere	VSGYSWLFALGVVLLASFLPVYSYLALIYRELGRMTT
Ga0099791_102556303	3300007255	Vadose Zone Soil	VSNAYRWLFAFGVVLLALFLPVYSYLTLIYRELGRMSTG
Ga0099791_104411902	3300007255	Vadose Zone Soil	MPQLWETWTFVGSILVLALGLPIFSYLTLIYRELGRMSTGRIHEHLEIF
Ga0099794_104107393	3300007265	Vadose Zone Soil	VKYFFWAYTTATMLLALGLPIFSYLTLIYRELGRMTTGRIH
Ga0066710_1016384563	3300009012	Grasslands Soil	MKTYFWAYTLGTVLLALGLPIFSYLTLIYRELGRMTTGRIH
Ga0099829_100288345	3300009038	Vadose Zone Soil	MNLSWLYALSVVLVGFTLPIFSYLTLIYRELGRMTTGRVH
Ga0099829_107274163	3300009038	Vadose Zone Soil	MNLSWMYALSVALVGLTLPIFSYLTLIYRELGRMTT
Ga0099829_112645732	3300009038	Vadose Zone Soil	MNLGWLYALSVVLVGFTLPIFSYLTLIYRELGRMT
Ga0099830_110001143	3300009088	Vadose Zone Soil	VINLSWLYALSVALVGFTLPIFSYLTLIYRELGRMT
Ga0099827_105486973	3300009090	Vadose Zone Soil	MNLSWLYALSVVVVGLTLPIFSYLTLIYRELGRMTTGRIHEH
Ga0099827_106448051	3300009090	Vadose Zone Soil	VSNAYRWFFAFGVVLLALFLPVYSYLTLIYRELGRMTTGPVHE
Ga0105237_101765835	3300009545	Corn Rhizosphere	VTVKLYFWAYTIGTVLLALGLPVFSYLTLIYRELGR
Ga0105237_105747171	3300009545	Corn Rhizosphere	MSGYTWLFALGVLLLASFLPVYSYLALIYRELGRMTTGPVHEHLDIF
Ga0116215_14070432	3300009672	Peatlands Soil	MMLLWASVGSVLVLALGLPIFSYLALIYRELGRMST
Ga0126380_112580752	3300010043	Tropical Forest Soil	MSTSLYTWIYGFAVVLLALFLPVFSYLTLIYRELGRMT
Ga0126380_119877382	3300010043	Tropical Forest Soil	VSGYSWLFALGVVLLASLLPVYSYLALIYRELGRMTTGPVHEH
Ga0126384_101565481	3300010046	Tropical Forest Soil	VSGYSWLFALGVVLLASFLPVYSYLALIYRELGRMTTGP
Ga0126373_106614253	3300010048	Tropical Forest Soil	VRIYFWAYTFGTLLLAVGLPIFSYLTLIYRELGRM
Ga0134084_103441512	3300010322	Grasslands Soil	MNLGWLYAFSVVLVAFTLPIFSYLTLIYRELGRMTTG
Ga0134080_106142711	3300010333	Grasslands Soil	MNYSWLYALSVVLVAVTLPIFSYVTLIYRELGRMTTGRVHEHLE
Ga0134071_103680093	3300010336	Grasslands Soil	MNYSWLYALSVVLVAVTLPIFSYVTLIYRELGRMTTGRV
Ga0074046_106831631	3300010339	Bog Forest Soil	MMVWPYVGGLLVLTLILPIFSYLTLIYRELGRMSTGRVHEHLDI
Ga0126370_103721801	3300010358	Tropical Forest Soil	VNGYSWLFALGVVLLALFLPVYSYLALIYRELGRMTTGPVHEHLDIFEAE
Ga0126372_102816161	3300010360	Tropical Forest Soil	MYLRWIYALSVVLVGLTLPIFSYLTLIYRELGRMTTGR
Ga0126372_131066261	3300010360	Tropical Forest Soil	VTGYLWIYAIGLAILTASLPVFSYLALIYRELGRM
Ga0126381_1038687001	3300010376	Tropical Forest Soil	VSGYSWLFALGVVLLASFLPVYSYLALIYRELGRMTTGPVH
Ga0126383_104248611	3300010398	Tropical Forest Soil	MLMATAWRWGFWIGVALLALGLPIFSYLTLIYRELGRMTTSRVHEHL
Ga0126383_110819191	3300010398	Tropical Forest Soil	MNYTWLYVLGVILLALFLPVFSYLTLIYRELGRMTTGP
Ga0137392_106746813	3300011269	Vadose Zone Soil	MNLGWLYALGVVLIGFTLPIFSYLTLIYRELGRMTTGRV
Ga0137391_109181713	3300011270	Vadose Zone Soil	MNLGWLYALSVVLVGFTLPIFSYLTLIYRELGRMTTG
Ga0137389_111926932	3300012096	Vadose Zone Soil	MVLSWLYALSVVLVGLTLPVFSYLTLIYRELGRMTTGRIHE
Ga0137388_100279626	3300012189	Vadose Zone Soil	VNFLFLVYTLGTVLLASSLPIFSYLTLIYRELGRMTTGRI
Ga0137363_104597011	3300012202	Vadose Zone Soil	MNYSWLYALSVVLVAVTLPIFSYVTLIYRELGRMT
Ga0137363_114135931	3300012202	Vadose Zone Soil	VTFLFLVYTLGTVLLALSLPIFSYLTLIYRELGRMTTGRIHEHLEIFEAE
Ga0137399_113535261	3300012203	Vadose Zone Soil	MPQLWETWTFVGSVLVLALGLPIFSYITLIYRELGRMTTGR
Ga0137362_113416291	3300012205	Vadose Zone Soil	MMNLGWLYALSVVLVGFTLPIFSYLTLIYRELGRMTTGR
Ga0137379_114361922	3300012209	Vadose Zone Soil	MNLSWMYALSVALVGLTLPVFSYMSLIYRELGRMTTGRVHEHL
Ga0137378_116774041	3300012210	Vadose Zone Soil	MNLGWLYALSVALVGLTLPVFSYLSLIYRELGRMTTGRVHEHL
Ga0137361_115154452	3300012362	Vadose Zone Soil	MNLSWLYALSVLLVAFTLPIFSYLTLIYRELGRMTTGRVH
Ga0137390_104581161	3300012363	Vadose Zone Soil	MYSWAYVLGVVLLAIGLPVFSYITLIYRELGRMNTGRIH
Ga0137390_108913881	3300012363	Vadose Zone Soil	VNFLFLVYTLGTVLLASSLPIFSYLTLIYRELGRMTTGPIHQHLEIFEAEI
Ga0137358_102504293	3300012582	Vadose Zone Soil	MMNLGWLYALSVVLIGFTLPIFSYLTLIYRELGRMT
Ga0137358_104530831	3300012582	Vadose Zone Soil	VNGYSWLFVLGVVLLALFLPVYSYRALSYRELGRMTTGPVHEHLDI
Ga0137358_106831101	3300012582	Vadose Zone Soil	MNYSWLYAIGVVLLALFLPVFSYLTLIYRELGRMTTGPIHE
Ga0137358_110993111	3300012582	Vadose Zone Soil	MGLSWLYALSVVLVGLTLPIFSYLTLIYRELGRMTTG
Ga0137359_1000666013	3300012923	Vadose Zone Soil	VNGYSWLFALGVVLLALFLPVYSYLALIYRELGRMSAGPVHEHLDIFEA
Ga0137419_102701351	3300012925	Vadose Zone Soil	MNLSWLYALSVVLVGFTLPIFSYLTLIYRELGRMTTGRVHEH
Ga0137416_112644022	3300012927	Vadose Zone Soil	LLATMLLALGLPIFSYLTLIYRELGRMTTGRIHEHL*
Ga0137416_117755992	3300012927	Vadose Zone Soil	MNLSLLYTLSVVLVAFTLPIFSYLTLIYRELGRMTTGRIHQH
Ga0137420_13303836	3300015054	Vadose Zone Soil	MIYTWLYAIGVVLLALFLPVLSYLTLIYRELGRMSAGPVHEHLDILKRKSNPN*
Ga0137418_102132781	3300015241	Vadose Zone Soil	MNLSLLYALSVVLVAFTLPIFSYLTLIYRELGRMTTGRI
Ga0137403_104449383	3300015264	Vadose Zone Soil	MNLSLLYALSVVLVAFTLPIFSYLTLIYRELGRMTTGRIHQH
Ga0134089_105262631	3300015358	Grasslands Soil	MNLSWLYALSVVLVGLTLPIFSYLTLIYRELGRMTTGR
Ga0132257_1018046713	3300015373	Arabidopsis Rhizosphere	VSAYTWLFALGVLLLASFLPVYSYLALIYRELGRMTT
Ga0132255_1048711662	3300015374	Arabidopsis Rhizosphere	VSGYTWLFALGVLLLASFLPVYSYLALIYRELGRMTTGPVHEH
Ga0182036_116386922	3300016270	Soil	LTMVPWIYIGGVLVLALGLPIFSYLALIYRELGRMTTGRIHE
Ga0182032_111591292	3300016357	Soil	MLVWVYVGSLLVLALGLPIFSYLTLIYRELGRMTT
Ga0182034_110448962	3300016371	Soil	MMWNLWAFVGSVVVLALGLPIFSYVTLIYRELGRMT
Ga0182037_106381583	3300016404	Soil	VSGYTWLFALGVVLLASFLPVYSYLALIYRELGRMSTGPVHEHLDIFE
Ga0182037_113996471	3300016404	Soil	VTRLWWVYILSVAVLALGLPIFSYLTLIYRELGRMTTGRV
Ga0187778_110796092	3300017961	Tropical Peatland	VKVYFWAYTLGTVLLALSLPIFSYLTLIYRELGRMTTGRVH
Ga0187782_103524411	3300017975	Tropical Peatland	MNLSVYALSLFLLGLTLPIFSYLTLIYRELCRITTGRVHEH
Ga0187804_100288973	3300018006	Freshwater Sediment	MLLWVYIGCLLVLALGLPIFSYLTLIYRELGRMSTGRVHE
Ga0187772_102611621	3300018085	Tropical Peatland	MLLWTYIGSLFVLALGLPIFSYLTLIYRELGRMTT
Ga0187797_10334311	3300019284	Peatland	MYLSWLYALSVALVAVTLPIFSYLTLIYRELGRMTTGRVREHLEIFEA
Ga0193718_10150553	3300019999	Soil	VSNAYRWFFAFGVVLLALFLPVYSYLTLIYRELGRMTAGPVHEHLDIFEAEI
Ga0193749_10425543	3300020010	Soil	VSNAYRWFFAFGVVLLALFLPVYSYLTLIYRELGRMTTGPVHEH
Ga0179592_102594841	3300020199	Vadose Zone Soil	MPQLWETWAFVGSVLVLALGLPIISYLTLIYRELGRM
Ga0210407_101778051	3300020579	Soil	MLQTWAFVGSILVLALGLPIFSYLTLIYRELGRMSTGRIHEH
Ga0210400_107531483	3300021170	Soil	VKYFFWAYAVATVLLALGLPIFSYLTLIYRELGRMTTGRIHEHLEIF
Ga0210405_100852241	3300021171	Soil	VKVYFWAYTTGTLLLALGLPIFSYLTLIYRELGRMTTGRVHAHL
Ga0210405_100864591	3300021171	Soil	MMLPWIYIGGVLVLALGLPIFSYLALIYRELGRMTTGRIHEHL
Ga0210396_113841162	3300021180	Soil	MLLWTYVGSLLVLALGLPIFSYLTLIYRELGRMTTGRV
Ga0210388_106900933	3300021181	Soil	VTVKLYFWAYTIGTVLLALGLPVFSYLTLIYRELGRMTTG
Ga0213877_103061431	3300021372	Bulk Soil	MSGYTWLFAIGVVLLASFLPVYSYLTLIYRELGRMTTGPVHEHLD
Ga0210393_106085781	3300021401	Soil	VKVYFWAYTTGTLLLALGLPIFSYLTLIYRELGRMTTGRVHAHLDIFEAE
Ga0210387_117862271	3300021405	Soil	MPQLWETWTFVGSILVLALGLPIFSYLTLIYRELGRMTTGRV
Ga0210402_110066953	3300021478	Soil	MLYSLYVLGIFLLALGLPVLSYLTLIYRELGRMTT
Ga0210402_113747262	3300021478	Soil	MRFVNWAFGFRILLLAILLPIFSYLTLIYRELGRMTTGRIRQHLEI
Ga0210409_102326763	3300021559	Soil	VKFFFWAYTIATVLLALGLPIFSYLTLIYRELGRMTTG
Ga0126371_107506961	3300021560	Tropical Forest Soil	MMWNLWAFVGSVAVLALGLPIFSYLTLIYRELGRMTTG
Ga0126371_127044941	3300021560	Tropical Forest Soil	MRGYTWLFALGVVLLASFLPVYSYLALIYRELGRMTTGPIHEHLD
Ga0242659_10296121	3300022522	Soil	MNTYRLVYILGVVLLAFGLPIFSYLTLIYRELGRMNT
Ga0242661_11031451	3300022717	Soil	MNTFRWVYVLGVVLLAFGLPIFSYLTLIYRELGRMNTG
Ga0247695_10721131	3300024179	Soil	MNYSWLYAIGVVLLALFLPVFSYLTLIYRELGRMTTGPIHKHLDIFEA
Ga0228598_10204431	3300024227	Rhizosphere	MNTFRWVYVLGVVLLAFGLPIFSYLTLIYRELGRMNT
Ga0208219_10981541	3300025625	Arctic Peat Soil	VTFSWLFILGISLLAIGLPIFSYLTLIYRELGRMTTGRIHEHLEI
Ga0207671_109407391	3300025914	Corn Rhizosphere	MKVYFWAYALGTVLLALGLPIFSYLTLIYRELGRMTTG
Ga0207693_100331101	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MLPWVYIGGVLVLALGLPIFSYLALIYRELGRMTTGRIHEHLDIF
Ga0207660_106748383	3300025917	Corn Rhizosphere	MTTYRWVYSLGVVLLGFGLPIFSYLALIYRELGRMNT
Ga0207686_110188763	3300025934	Miscanthus Rhizosphere	MKVYFWAYALGTVLLALGLPIFSYLTLIYRELGRMTTGKVHQHLDIFEA
Ga0207641_104351011	3300026088	Switchgrass Rhizosphere	VSGYTWLFALGVLLLASFLPVYSYLALIYRELGRMTTGPVHEHLDI
Ga0209473_12914062	3300026330	Soil	MNLSWLYALSVVLVAFTLPIFSYLTLIYRELGRMTT
Ga0257171_10205831	3300026377	Soil	MLQTWTFVGSILVLALGLPIFSYLTLIYRELGRMST
Ga0257169_10833712	3300026469	Soil	VSNAYRWFFAFGVVLLALFLPVYSYLTLIYRELGRMTTGPVHEHLDIFEA
Ga0209648_102513491	3300026551	Grasslands Soil	MNLSWLYALSVVLVGFTLPIFSYLTLIYRELGRMTTGRVHE
Ga0179587_101644283	3300026557	Vadose Zone Soil	VKLFFWAYLLATMLLALGLPIFSYLTLIYRELGRMTTGRIHEHLEI
Ga0208859_10337811	3300027069	Forest Soil	MTLSWLYALSVIVVGLTLPVFSYLTLIYRELGRMTTGRVHE
Ga0209329_11416532	3300027605	Forest Soil	VKVYFWAYVAGTLLLALGLPVLSYLTLIYRELGRMTTGRVHAHLDIF
Ga0209076_10714243	3300027643	Vadose Zone Soil	MNLGWLYALSVVLVGFTLPIFSYLTLIYRELGRMTTGRVH
Ga0209180_103041071	3300027846	Vadose Zone Soil	MFSWIYALGVLLLALGLPIFSYLTLIYRELGRMTTGRV
Ga0209624_100253961	3300027895	Forest Soil	VTVKLYFWAYTIGTVLLALGLPVFSYLTLIYRELGRMTTGRVHVH
Ga0209067_102187773	3300027898	Watersheds	MNLSWLYAISVVLVAVTLPIFSYLTLIYRELGRMTTGRVHEHLD
Ga0209067_103335141	3300027898	Watersheds	MTLSWLFAFSVVLIGLTLPIFSYLTLIYRELGRMTTGRVHE
Ga0209006_114411361	3300027908	Forest Soil	VSNGYSWLFALGVVLLALFLPIYSYLTLIYRELGRMTTGPVHEH
Ga0209698_101916421	3300027911	Watersheds	MNLSWLYALSVLLVAVTLPIFSYLTLIYRELGRMT
Ga0209526_103049831	3300028047	Forest Soil	VKYFFWAYTIATALLALGLPIFSYLALIYRELGRMTTGRIHEHLEI
Ga0247663_10974641	3300028145	Soil	VNGYSWLFALGVVLLASFLPVYSYLALIYRELGRMS
Ga0310038_104976812	3300030707	Peatlands Soil	MMLLWASVGSVLVLALGLPIFSYLALIYRELGRMTTG
Ga0170822_130159703	3300031122	Forest Soil	VSNAYRWFFAFGMVLLALFLPVYSYLTLIYRELGRMT
Ga0170824_1046682951	3300031231	Forest Soil	MNMLRWVYALGVVVLALGLPVFSYLTLIYRELGRM
Ga0307476_111470152	3300031715	Hardwood Forest Soil	VKVFFWAYTMATVLLALGMPIFSYLTLIYRELGRMTTGRIH
Ga0307474_108424111	3300031718	Hardwood Forest Soil	MNLRWLYALSVVLLGLALPIFSYLTLIYRELGRMTTGR
Ga0318501_104053011	3300031736	Soil	VSGYSWLFALGVVLLASFLPVYSYLALIYRELGRMTTG
Ga0318547_109712091	3300031781	Soil	VSGYTWRFALGVVLLASFLPVYSYLALIYRELGRMSTGPVHEH
Ga0307473_112171961	3300031820	Hardwood Forest Soil	VSGYTWLFALGVVLLASFLPVYSYLALIYRELGRMTTGPVHEHLDI
Ga0307478_102058153	3300031823	Hardwood Forest Soil	MNILRWAYALGVVVLAFGLPVFSYLALIYRELGRMT
Ga0307478_104425783	3300031823	Hardwood Forest Soil	MKFFNWAFAVRIALLAVGLPIFSYLTLIYRELGRMNRGRVREHL
Ga0306919_113656812	3300031879	Soil	MLLWAYVGSVLALAVGLPIFSYLTLIYRELGRMTTGRV
Ga0306921_103978013	3300031912	Soil	VTRLWWVYILSVAVLALGLPIFSYLTLIYRELGRMTTGRVHEHLDI
Ga0310916_112118151	3300031942	Soil	VSGYTWLFALGVVLLASFLPVYSYLALIYRELGRMTTGPVHEHL
Ga0310910_100874074	3300031946	Soil	VSGYTWLFALGVVLLASFLPVYSYLALIYRELGRMSTGPVHEHLNIFE
Ga0307479_100641664	3300031962	Hardwood Forest Soil	MQPLWETWTFVGSILILALGLPIFSYITLIYRELGRMTTGR
Ga0307479_121648521	3300031962	Hardwood Forest Soil	MLYSLYVLGIFLLALGLPVLSYLTLIYRELGRMTTGRVHEHLDI
Ga0318549_101073093	3300032041	Soil	MTLWAYLGSVLVLALGLPIFSYLTLIYRELGRRATG
Ga0318506_104901321	3300032052	Soil	MMLWAYVGSVLALALGLPIFSYLTLIYRELGRMTTGRVHE
Ga0318570_100522753	3300032054	Soil	MTLWAYLGSVLVLALGLPIFSYLTLIYRELGRMATGR
Ga0318533_103033961	3300032059	Soil	MLVWVYVGSLLVLALGLPIFSYLTLIYRELGRMTTGRVHDH
Ga0307471_1015882323	3300032180	Hardwood Forest Soil	VSGYTWLFALGVVLLASFLPVYSYLALIYRELGRMTTG
Ga0307471_1016335081	3300032180	Hardwood Forest Soil	VNGYSWLFAFGVALLASFLPVYSYLALIYRELGRISSGPVHE
Ga0307471_1023225961	3300032180	Hardwood Forest Soil	MSGYTWLFALGVLLLASFLPVYSYLALIYRELGRMTTGPVHE
Ga0307471_1024912011	3300032180	Hardwood Forest Soil	MVPWIYIGGVLVLALGLPIFSYLALIYRELGRLTTGR
Ga0306920_1004460603	3300032261	Soil	MMLMATAWRWAFWVGVALLALGLPVFSYLTLIYRELGRMNTGR
Ga0335079_105254893	3300032783	Soil	MLPWVYIGGVLVLALGLPIFSYLALIYRELGRMTTGRIHEHLDIFE
Ga0335072_100686311	3300032898	Soil	MLLWTYIGSLFVLALGLPIFSYLTLIYRELGRMTTG
Ga0335083_100709001	3300032954	Soil	MMLEIWAFVGSVAVLALGLPIFSYVTLIYRELGRMTTGQVH
Ga0335076_107069973	3300032955	Soil	MSTYRWVYALGVVLLAFGLPIFSYLTLIYRELGRMNTGRVREHLE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042369

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences