Metagenome / Metatranscriptome Family F042469

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042469
Family Type	Metagenome / Metatranscriptome
Number of Sequences	158
Average Sequence Length	51 residues
Representative Sequence	MSRVLCLEPGCNETVELPGDVPVALTEEILPPREREIVIVCPRGHRKIYVLRA
Number of Associated Samples	114
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.19 %
% of genes near scaffold ends (potentially truncated)	30.38 %
% of genes from short scaffolds (< 2000 bps)	69.62 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.278 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.215 % of family members)
Environment Ontology (ENVO)	Unclassified (29.747 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.873 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 24.69% Coil/Unstructured: 75.31%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF01972	SDH_sah	22.15
PF00196	GerE	1.27
PF13180	PDZ_2	0.63
PF13367	PrsW-protease	0.63
PF14525	AraC_binding_2	0.63
PF08734	GYD	0.63
PF07045	DUF1330	0.63
PF11964	SpoIIAA-like	0.63
PF01047	MarR	0.63
PF04545	Sigma70_r4	0.63
PF03706	LPG_synthase_TM	0.63
PF01475	FUR	0.63
PF04978	DUF664	0.63
PF16918	PknG_TPR	0.63
PF00561	Abhydrolase_1	0.63
PF01408	GFO_IDH_MocA	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	44.30
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.63
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	0.63
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.63
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.28 %
Unclassified	root	N/A	17.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.28 %
Unclassified	root	N/A	17.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.28 %
Unclassified	root	N/A	17.72 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	81.65 %
Unclassified	root	N/A	17.72 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	81.65 %
Unclassified	root	N/A	17.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	53.80 %
Unclassified	root	N/A	17.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.72 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.90 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.72 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.80 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.72 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3.80 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.72 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.90 %
Streptomyces griseus group	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces griseus group	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.72 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.90 %
Streptomyces griseus subgroup	species subgroup	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces griseus group → Streptomyces griseus subgroup	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.72 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.90 %
Streptomyces griseus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces griseus group → Streptomyces griseus subgroup → Streptomyces griseus	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10169164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	885	Open in IMG/M
3300004091\|Ga0062387_100130982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1410	Open in IMG/M
3300004479\|Ga0062595_100119972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1452	Open in IMG/M
3300004633\|Ga0066395_10515770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	691	Open in IMG/M
3300005332\|Ga0066388_100094764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3425	Open in IMG/M
3300005332\|Ga0066388_100104878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3303	Open in IMG/M
3300005332\|Ga0066388_103446364	Not Available	808	Open in IMG/M
3300005363\|Ga0008090_15687995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1022	Open in IMG/M
3300005434\|Ga0070709_10016422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4226	Open in IMG/M
3300005445\|Ga0070708_100066404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3238	Open in IMG/M
3300005445\|Ga0070708_100208561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1830	Open in IMG/M
3300005445\|Ga0070708_100382694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1327	Open in IMG/M
3300005445\|Ga0070708_100810186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	880	Open in IMG/M
3300005529\|Ga0070741_10665858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	922	Open in IMG/M
3300005602\|Ga0070762_10192129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1245	Open in IMG/M
3300005610\|Ga0070763_10041304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2158	Open in IMG/M
3300005764\|Ga0066903_101969057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1121	Open in IMG/M
3300006028\|Ga0070717_11652136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580	Open in IMG/M
3300006175\|Ga0070712_100465029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1055	Open in IMG/M
3300009038\|Ga0099829_10140146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1921	Open in IMG/M
3300009088\|Ga0099830_10024000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4021	Open in IMG/M
3300009090\|Ga0099827_11597108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	568	Open in IMG/M
3300010046\|Ga0126384_10055652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2750	Open in IMG/M
3300010046\|Ga0126384_10231076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1483	Open in IMG/M
3300010048\|Ga0126373_12139893	Not Available	621	Open in IMG/M
3300010154\|Ga0127503_11021457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	910	Open in IMG/M
3300010154\|Ga0127503_11087053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	970	Open in IMG/M
3300010358\|Ga0126370_10063808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2404	Open in IMG/M
3300010361\|Ga0126378_10085336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3072	Open in IMG/M
3300010361\|Ga0126378_12109679	Not Available	643	Open in IMG/M
3300010361\|Ga0126378_13096739	Not Available	529	Open in IMG/M
3300010362\|Ga0126377_13081998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538	Open in IMG/M
3300010366\|Ga0126379_11761582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	724	Open in IMG/M
3300010398\|Ga0126383_10044447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3653	Open in IMG/M
3300011270\|Ga0137391_11540878	Not Available	509	Open in IMG/M
3300012198\|Ga0137364_10321639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1151	Open in IMG/M
3300012201\|Ga0137365_10029244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4242	Open in IMG/M
3300012201\|Ga0137365_10050218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3161	Open in IMG/M
3300012209\|Ga0137379_10032321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5041	Open in IMG/M
3300012349\|Ga0137387_10104550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1977	Open in IMG/M
3300012350\|Ga0137372_10095163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2508	Open in IMG/M
3300012351\|Ga0137386_11035981	Not Available	582	Open in IMG/M
3300012354\|Ga0137366_10505931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	872	Open in IMG/M
3300012359\|Ga0137385_10096903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2616	Open in IMG/M
3300012359\|Ga0137385_11069811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	664	Open in IMG/M
3300012361\|Ga0137360_10888053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	768	Open in IMG/M
3300012363\|Ga0137390_11093666	Not Available	746	Open in IMG/M
3300012948\|Ga0126375_10116164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1621	Open in IMG/M
3300017959\|Ga0187779_10401612	Not Available	893	Open in IMG/M
3300017959\|Ga0187779_11320928	Not Available	511	Open in IMG/M
3300017970\|Ga0187783_10030706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3980	Open in IMG/M
3300017970\|Ga0187783_10374524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1036	Open in IMG/M
3300017970\|Ga0187783_11078744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	578	Open in IMG/M
3300017970\|Ga0187783_11245006	Not Available	536	Open in IMG/M
3300017972\|Ga0187781_10150385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1634	Open in IMG/M
3300017974\|Ga0187777_10449941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	895	Open in IMG/M
3300017974\|Ga0187777_10794726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	675	Open in IMG/M
3300018085\|Ga0187772_10038121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2895	Open in IMG/M
3300019789\|Ga0137408_1195995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3301	Open in IMG/M
3300019887\|Ga0193729_1027037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2446	Open in IMG/M
3300019887\|Ga0193729_1077903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1297	Open in IMG/M
3300019890\|Ga0193728_1225485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	769	Open in IMG/M
3300020581\|Ga0210399_10361716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1211	Open in IMG/M
3300020582\|Ga0210395_10036191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3619	Open in IMG/M
3300021388\|Ga0213875_10082549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1500	Open in IMG/M
3300021407\|Ga0210383_10044632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3694	Open in IMG/M
3300021407\|Ga0210383_10574462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	972	Open in IMG/M
3300021474\|Ga0210390_10083209	All Organisms → cellular organisms → Bacteria	2657	Open in IMG/M
3300021560\|Ga0126371_10713647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1150	Open in IMG/M
3300021560\|Ga0126371_11144886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	916	Open in IMG/M
3300022510\|Ga0242652_1034033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces griseus group → Streptomyces griseus subgroup → Streptomyces griseus	597	Open in IMG/M
3300024220\|Ga0224568_1016451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	732	Open in IMG/M
3300024225\|Ga0224572_1004626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2408	Open in IMG/M
3300025910\|Ga0207684_10440940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1118	Open in IMG/M
3300025922\|Ga0207646_10013411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7839	Open in IMG/M
3300025922\|Ga0207646_11157092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	679	Open in IMG/M
3300026304\|Ga0209240_1040388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1769	Open in IMG/M
3300026320\|Ga0209131_1328435	Not Available	568	Open in IMG/M
3300026551\|Ga0209648_10253890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1299	Open in IMG/M
3300027505\|Ga0209218_1028198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1083	Open in IMG/M
3300027567\|Ga0209115_1058679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	877	Open in IMG/M
3300027829\|Ga0209773_10056339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1592	Open in IMG/M
3300027846\|Ga0209180_10071669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1944	Open in IMG/M
3300027882\|Ga0209590_10008987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4578	Open in IMG/M
3300027882\|Ga0209590_10840407	Not Available	581	Open in IMG/M
3300027884\|Ga0209275_10151900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1227	Open in IMG/M
3300030730\|Ga0307482_1143942	Not Available	690	Open in IMG/M
3300030743\|Ga0265461_13039787	Not Available	563	Open in IMG/M
3300031057\|Ga0170834_103858344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1421	Open in IMG/M
3300031543\|Ga0318516_10030977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2822	Open in IMG/M
3300031543\|Ga0318516_10399755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	792	Open in IMG/M
3300031543\|Ga0318516_10537928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	669	Open in IMG/M
3300031543\|Ga0318516_10582944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	639	Open in IMG/M
3300031544\|Ga0318534_10043299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2504	Open in IMG/M
3300031549\|Ga0318571_10198465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	717	Open in IMG/M
3300031549\|Ga0318571_10211312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	699	Open in IMG/M
3300031561\|Ga0318528_10410502	Not Available	727	Open in IMG/M
3300031564\|Ga0318573_10103070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1466	Open in IMG/M
3300031681\|Ga0318572_10168101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1272	Open in IMG/M
3300031682\|Ga0318560_10440362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	705	Open in IMG/M
3300031682\|Ga0318560_10562020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	618	Open in IMG/M
3300031708\|Ga0310686_106723438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2958	Open in IMG/M
3300031713\|Ga0318496_10710642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	554	Open in IMG/M
3300031768\|Ga0318509_10757441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538	Open in IMG/M
3300031770\|Ga0318521_10304331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	939	Open in IMG/M
3300031771\|Ga0318546_10229040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1275	Open in IMG/M
3300031779\|Ga0318566_10263296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	854	Open in IMG/M
3300031781\|Ga0318547_10997865	Not Available	523	Open in IMG/M
3300031799\|Ga0318565_10360409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	705	Open in IMG/M
3300031831\|Ga0318564_10548958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	500	Open in IMG/M
3300031835\|Ga0318517_10131941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1110	Open in IMG/M
3300031846\|Ga0318512_10536822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	594	Open in IMG/M
3300031859\|Ga0318527_10290576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	696	Open in IMG/M
3300031860\|Ga0318495_10185966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	936	Open in IMG/M
3300031866\|Ga0316049_102658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1051	Open in IMG/M
3300031880\|Ga0318544_10116152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1015	Open in IMG/M
3300031893\|Ga0318536_10059958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1855	Open in IMG/M
3300031896\|Ga0318551_10601241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	634	Open in IMG/M
3300031947\|Ga0310909_10335288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1269	Open in IMG/M
3300031959\|Ga0318530_10187162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	847	Open in IMG/M
3300032001\|Ga0306922_12137795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	541	Open in IMG/M
3300032009\|Ga0318563_10104601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1499	Open in IMG/M
3300032009\|Ga0318563_10330844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	824	Open in IMG/M
3300032091\|Ga0318577_10540716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	555	Open in IMG/M
3300032515\|Ga0348332_11150693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	881	Open in IMG/M
3300032515\|Ga0348332_12158459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1250	Open in IMG/M
3300032783\|Ga0335079_10012144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9836	Open in IMG/M
3300032783\|Ga0335079_10139198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2729	Open in IMG/M
3300032805\|Ga0335078_10091087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4421	Open in IMG/M
3300032805\|Ga0335078_10241500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2472	Open in IMG/M
3300032805\|Ga0335078_10559487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1453	Open in IMG/M
3300032805\|Ga0335078_11941495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	633	Open in IMG/M
3300032828\|Ga0335080_10115943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2973	Open in IMG/M
3300032828\|Ga0335080_10480952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1321	Open in IMG/M
3300032892\|Ga0335081_11032583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	954	Open in IMG/M
3300032895\|Ga0335074_10040836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6454	Open in IMG/M
3300032895\|Ga0335074_10091462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4037	Open in IMG/M
3300032896\|Ga0335075_10779048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	901	Open in IMG/M
3300032896\|Ga0335075_11019344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	740	Open in IMG/M
3300032896\|Ga0335075_11346204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	606	Open in IMG/M
3300032898\|Ga0335072_10092913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3880	Open in IMG/M
3300032898\|Ga0335072_10282101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1878	Open in IMG/M
3300032955\|Ga0335076_10392472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1273	Open in IMG/M
3300032955\|Ga0335076_10403148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1252	Open in IMG/M
3300032955\|Ga0335076_11163714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	655	Open in IMG/M
3300033134\|Ga0335073_10007850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14954	Open in IMG/M
3300033158\|Ga0335077_11928643	Not Available	551	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.73%
Host-Associated	Host-Associated	1.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.20%
Aquatic	Environmental → Aquatic	2.53%
Plants	Host-Associated → Plants	1.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.30%
Freshwater	Environmental → Aquatic → Freshwater	2.53%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.90%
Roots	Host-Associated → Plants → Roots	0.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	19.62%
Loam	Environmental → Terrestrial → Soil → Loam	13.29%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.27%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.27%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.01%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.22%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	19.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.90%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.27%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.27%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.63%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.63%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.22%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.29%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	13.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.86%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.90%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.27%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.27%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.27%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.63%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.63%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.63%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.63%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022510	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024220	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU5	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031866	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSU5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_101691642	3300003505	Forest Soil	MSRVMCLEPDCNETVEIPEAPVAVAEEYLPPPEREIQIVCPRGHRNVYVTKSF*
Ga0062387_1001309821	3300004091	Bog Forest Soil	MSRVLCLETGCNETVELPGDGPIALSEEQVAPREREIVIMCPKGHRKIYVLQA*
Ga0062595_1001199722	3300004479	Soil	MPRILCMEPGCNAMVELPADEPLAVIEEYLPPEREVEIVCPNGHRKTYVLAR*
Ga0066395_105157702	3300004633	Tropical Forest Soil	MSRVLCLDPACNETVELPGDVPVARVSEEYLPPPPDRQVEIVCPRGHRNLYLLQGAP*
Ga0066388_1000947642	3300005332	Tropical Forest Soil	MSRVLCLEPGCHETVELPGDVPVARVSEEYLPPPERQVEIVCPQGHRNLYLFQGAP*
Ga0066388_1001048782	3300005332	Tropical Forest Soil	MSRVLCLEPGCHETVELPGDVPVARVAEEYLPPPERQVEIVCPQGHRNMYLLQGAP*
Ga0066388_1034463642	3300005332	Tropical Forest Soil	MSRVLCLEPGCNETVEIPEEPVAVIEEYLPPQEREIVIVCPRGHRKIYVLKY*
Ga0008090_156879952	3300005363	Tropical Rainforest Soil	MSRVLCLEQGCNETVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS*
Ga0070709_100164223	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSRIMCLEPGCNETVELPGEGPVAVIEEYLPPREHEIEIICPRGHRKVYVLKA*
Ga0070708_1000664043	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPRVMCMEPGCNETVELPGDVPIAVIEEYLPPPEREIEVVCPKGHRKIYVLKP*
Ga0070708_1002085612	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSRVLCLEPGCNETVEIPEEPVAVIEEYLPPPEREIEIVCPRGHRKIYVLKY*
Ga0070708_1003826942	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSRVLCLEPGCNETVELPGDVPIAVIEEYLPPPEREIEVVCPKGHRKIYVLRP*
Ga0070708_1008101861	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSRVLCMEPGCNQTVELPEEPVAVIEEYLPPPEREIEIVCPRGHRRVYVLKY*
Ga0070741_106658581	3300005529	Surface Soil	MSRVMCLEPGCNETVELPGEGPVAVIEEYLPPREHEIEIICPRGHRKVYVLKA*
Ga0070762_101921292	3300005602	Soil	MSSVLCLEPGCNETVQLPGDEPVAVIEEYLPPQEREIVIVCPRGHRKLYVLTS*
Ga0070763_100413042	3300005610	Soil	MSRVLCMEPGCNETVELPEEAVAVIEEYLPPPEHEIEIVCPKGHRKVYVMNY*
Ga0066903_1019690572	3300005764	Tropical Forest Soil	MSRVLCLEPACSETVELPGDMPVARVSEEYLPPPERQVEIVCPQGHRHLYVLQGAP*
Ga0070717_116521361	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSRVLCLEPGCNQTVELPEEPVAVIEEYLPPPEREIEIVCPRGHRKVLL
Ga0070712_1004650292	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MEPGCNAMVELPADEPLAVIEEYLPPEREIEIVCPNGHRKTYVLAR*
Ga0099829_101401462	3300009038	Vadose Zone Soil	MPRVLCLEPGCNETVELPGDVPIAVIEEYLPPPEREIEVVCPKGHRKIYMLKS*
Ga0099830_100240002	3300009088	Vadose Zone Soil	MPRVLCLEPGCNETVELPGDVPIAVIEEYLPPPEREIEVVCPKGHRKIYMLKP*
Ga0099827_115971082	3300009090	Vadose Zone Soil	MSRILCLEPGCNETVELPEGPVAVIEEYLPPQEREIQIVCPKGHRKIYVLKY*
Ga0126384_100556522	3300010046	Tropical Forest Soil	MSRVLCLEPGCNETVEIPEEHVAVIEEYLPPQEREIEIVCPRGHRKIYVLKY*
Ga0126384_102310762	3300010046	Tropical Forest Soil	MSRVLCLEPACNETVELPGDVPVARVSEEYLPPPPDRQVEIVCPRGHRNLYLLQGAP*
Ga0126373_121398932	3300010048	Tropical Forest Soil	MSRVLCLEPSCNETVELPGDVPVARVSEEYLPPRERQVEIVCPQGHRNLYLLQGTP*
Ga0127503_110214572	3300010154	Soil	MSRVLCMEPGCNETVELPGDAPVAVIEEYLPPREQEIEVICPRGHRKVYVLKS*
Ga0127503_110870532	3300010154	Soil	MSSVLCLEPGCNESVELPGNGPIALTEEILPPREREIVIVCPRGHRKIYVLRS*
Ga0126370_100638082	3300010358	Tropical Forest Soil	MSRVLCLEPACNETVELPGDMPVARVSEEYLPPPERQVEIVCPQGHRHLYVLQGAP*
Ga0126378_100853364	3300010361	Tropical Forest Soil	MSRVLCLEPACNETVELPGDMPVARVSEEYLPPPERQVEIVCPQGHRHLYLLQGAP*
Ga0126378_121096791	3300010361	Tropical Forest Soil	MSRVLCLEPGCNETVEIPEEPVAVIEEYLPPQEREIEIVCPRGHRKIYVLKY*
Ga0126378_130967391	3300010361	Tropical Forest Soil	RLAIRELRLTVMSRVLCLEQGCNETVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS*
Ga0126377_130819982	3300010362	Tropical Forest Soil	LCLEPGCNETVELPGDVPVAVIEEYLPPREREIEVICPRGHRKVYVLNS*
Ga0126379_117615821	3300010366	Tropical Forest Soil	MSNVICLEPGCNETVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS*
Ga0126381_1028443171	3300010376	Tropical Forest Soil	VEIPEEPVAVIEEYLPPQEREIEIVCPRGHRKIYVLKY*
Ga0126383_100444472	3300010398	Tropical Forest Soil	MSNVICLEPGCNETVELPGDVPIALTEEILPPREQEIVIVCPRGHRKIYVLRS*
Ga0126350_103830711	3300010880	Boreal Forest Soil	TVELPGDEPVAVIEEYLPPQEREIVIVCPRGHRKLYVLMS*
Ga0137391_115408782	3300011270	Vadose Zone Soil	MSRVICLEPGCNESVELPGDTPVAVIEEYLPPREREIEVICPRGHRKLYVLSS*
Ga0137364_103216392	3300012198	Vadose Zone Soil	MSRVLCLEPGCNETVELPGDTPVAVIAEYLPPREREIEVICPRGHRKIYVLNS*
Ga0137365_100292443	3300012201	Vadose Zone Soil	MEPSCNEMVELPGDEPIAVIEEYLPPEREVEVVCCNGHRMTYVLAR*
Ga0137365_100502183	3300012201	Vadose Zone Soil	MSRVLCLEPGCNETVELPGDTPVAVIEEYLPPREREIEVICPRGHRKIYVLNS*
Ga0137379_100323215	3300012209	Vadose Zone Soil	MEPGCNETVELPGDVPIAVIEEYLPPPEREIEVVCPKGHRKIYVLKP*
Ga0137387_101045501	3300012349	Vadose Zone Soil	MSRVLCLEPGCNETVELPGDTPVAVIAEYLPPREREIEVICPRGHRKIYVLNS
Ga0137372_100951631	3300012350	Vadose Zone Soil	IMSRVLCLEPGCNETVELPGDTPVAVIEEYLPPREREIEVICPRGHRKIYVLNS*
Ga0137386_110359811	3300012351	Vadose Zone Soil	LRDTRIEVAIMSRVLCLEPGCNETVELPGDTPVAVIAEYLPPREREIEVICPRGHRKIYVLNS*
Ga0137366_105059312	3300012354	Vadose Zone Soil	MSRVLCLEPDCNETVELPGDTPVAVIEEYLPPREREIEVICPRGHRKIYVLNS*
Ga0137385_100969032	3300012359	Vadose Zone Soil	MEPGCNETVELPEEPVAVIEEYLPPPEREIEVVCPKGHRKIYVLRP*
Ga0137385_110698111	3300012359	Vadose Zone Soil	DTRIEVAIMSRVLCLEPGCNETVELPGDTPVAVIAEYLPPREREIEVICPRGHRKIYVLNS*
Ga0137385_113393092	3300012359	Vadose Zone Soil	MVELPGDEPIAVIEEYLPPEREVEVVCCNGHRMTYVLAR*
Ga0137360_108880532	3300012361	Vadose Zone Soil	LGVLRTQDTRIEVAIMSRVLCLEPGCNETVELPGDTPVAVIEEYLPPREREIEVICPRGHRKIYVLNS*
Ga0137390_110936661	3300012363	Vadose Zone Soil	LRWTVMSRVLCLEPGCNETVELPGDVPIAVIEEYLPPPEREIEVVCPKGHRKIYVLRP*
Ga0126375_101161642	3300012948	Tropical Forest Soil	MSRVLCLEPGCHETVELPGDVPVARVAEEYLPPPERQVEIVCPQGHRHLYVLQGAP*
Ga0187779_104016121	3300017959	Tropical Peatland	MSSVLCLEPGCNETVELPGDVPIALSGEKMAPREREIVIICPRGHRKIYVLRA
Ga0187779_113209281	3300017959	Tropical Peatland	MSRVLCLEQGCNETVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS
Ga0187783_100307062	3300017970	Tropical Peatland	MSRVLCLEPGCNESVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRA
Ga0187783_103745242	3300017970	Tropical Peatland	MSRVLCLEPGCNESVELPGDEPIALTEEILPPREREIVIVCPRGHRKIYVLRA
Ga0187783_110787442	3300017970	Tropical Peatland	MSRVLCLEPGCNETVELPGDVPVALTEEILPPREREIVIVCPRGHRKIYVLRA
Ga0187783_112450062	3300017970	Tropical Peatland	MSSVMCLEPGCNETVELPADPAIALGVEKVAPREREIVIVCPRGHRKIYVLRA
Ga0187781_101503851	3300017972	Tropical Peatland	MSRVLCLEPGCNESVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLR
Ga0187777_104499412	3300017974	Tropical Peatland	MSSVLCLEPGCNESVELPGDVPIALSGEKMAPREREIVIICPRGHRKIYVLRA
Ga0187777_107947262	3300017974	Tropical Peatland	MSSVLCLEPGCNESVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS
Ga0187772_100381212	3300018085	Tropical Peatland	MSSVLCLEPGCNETVELPGDVPIALGEEQVAPREREIVIVCPRGHRKIYVLRA
Ga0137408_11959952	3300019789	Vadose Zone Soil	MSRVLCLEPGCNETVELPGDTPVAVIEEYLPPREREIEVICPRGHRKIYVLNS
Ga0193729_10270372	3300019887	Soil	MSRVLCLEPGCNETVELPGDTPVAVIAEYLPPREREIEVICPRGHRKLYVLNS
Ga0193729_10779032	3300019887	Soil	MSRVLCLEPDCNETVELPGDMPVAVIEEYLPPREREIEVICPRGHRKIYVLNS
Ga0193728_12254852	3300019890	Soil	ENSRIRELRWAIMSRVLCLEPDCNETVELPGDMPVAVIEEYLPPREREIEVICPRGHRKIYVLNS
Ga0210399_103617162	3300020581	Soil	MSSVICLEPGCNESVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS
Ga0210395_100361913	3300020582	Soil	MSRVMCLEPDCNETVEIPEAPVAVAEEYLPPPEREIQIVCPRGHRNVYVTKSF
Ga0213875_100825491	3300021388	Plant Roots	MSRVMCLEPECNETVEIPEAPVAVAEEYLPPPEREIQIVCPRGHRNVYVTKSF
Ga0210383_100446321	3300021407	Soil	SSVICLEPGCNESVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS
Ga0210383_105744622	3300021407	Soil	MSSVICLEPGCNESVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVL
Ga0210390_100832092	3300021474	Soil	MSRVLCMEPGCNETVELPEEPVAVIEEYLPPREREIVIICPRGHRKIYVLKY
Ga0126371_107136472	3300021560	Tropical Forest Soil	MSRVLCLDPACNETVELPGDVPVARVSEEYLPPPDRQVEIVCPRGHRHLYLLQGAP
Ga0126371_111448862	3300021560	Tropical Forest Soil	MSRVLCLEPGCNETVEIPEEHVAVIEECLPPQEREIEIVCPRGHRKIYVLKY
Ga0242652_10340332	3300022510	Soil	MSSVICLEPGCNESVELPGDVPIALTGEILPPREREIVIVCPRGHRKIYVLRS
Ga0224568_10164512	3300024220	Plant Litter	MSRVLCMQPGCNETVEIPEAAVAVAEEYLPPPEREIQIVCPKGHRNVYVTKSF
Ga0224572_10046263	3300024225	Rhizosphere	MSRVLCMQPGCNETVEIPEAAVAVAEEYLPPPEREIQIVCPRGHRNVYVTKSF
Ga0207684_104409402	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPRVMCMEPGCNETVELPGDVPIAVIEEYLPPPEREIEVVCPKGHRKIYVLKP
Ga0207646_100134114	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSRVLCLEPGCNETVEIPEEPVAVIEEYLPPQEREIVIVCPRGHRKIYVLKY
Ga0207646_111570922	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MEPGCNQTVELPEEPVAVIEEYLPPPEREIEIVCPRGHRRVYVLKY
Ga0209240_10403882	3300026304	Grasslands Soil	MSRVLCMEPGCNQTVELPEEAVAVIEEYLPPPEREIEIVCPRGHRKVYVLKY
Ga0209131_13284352	3300026320	Grasslands Soil	MSRVLCMEPGCNQTVELPEEPVAVIEEYLPPPEREIEIVCPRGHRRVYVLKY
Ga0209648_102538902	3300026551	Grasslands Soil	MPRVLCMEPGCNETVELPGDVPMAVIEEYLPPPEREIEVVCPKGHRKIYMLKP
Ga0209218_10281981	3300027505	Forest Soil	MSRVLCMEPGCNETVELPEEAVAVIEEYLPPPEHEIEIVCPKGHRKVYVMNY
Ga0209115_10586792	3300027567	Forest Soil	MSSVLCLEPGCNETVELPGDEPVAVIEEYLPPQEREIVIVCPRGHRKLYVLTS
Ga0209773_100563392	3300027829	Bog Forest Soil	MSRVLCLETGCNETVELPGDGPIALSEEQVAPREREIVIMCPKGHRKIYVLQA
Ga0209180_100716692	3300027846	Vadose Zone Soil	MPRVLCLEPGCNETVELPGDVPIAVIEEYLPPPEREIEVVCPKGHRKIYMLKS
Ga0209590_100089873	3300027882	Vadose Zone Soil	MSRVLCLEPGCNETVELPGDVPIAVIEEYLPPPEREIEVVCPKGHRKIYVLRP
Ga0209590_108404071	3300027882	Vadose Zone Soil	PGCNETVELPGDTPVAVIEEYLPPREREIEVICPRGHRKIYVLNS
Ga0209275_101519002	3300027884	Soil	MSSVLCLEPGCNETVQLPGDEPVAVIEEYLPPQEREIVIVCPRGHRKLYVLTS
Ga0307482_11439422	3300030730	Hardwood Forest Soil	MSRVLCMEPGCNETVEIPEEPVAVIEEYLPPAEREIEIVCPKGHRKVYVMNL
Ga0265461_130397872	3300030743	Soil	MSRVLCLEAGCNETVELPGDEPVAVIEEYLPPQEREIVIVCPRGHRKLYVLTS
Ga0170834_1038583442	3300031057	Forest Soil	MSRVLCMEPGCNQTVELPEEPVAVIEEYLPPPEREIEIVCPRGHRRVY
Ga0318516_100309773	3300031543	Soil	MSRVLCLEPGCNESVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS
Ga0318516_103997552	3300031543	Soil	MSSVICLEPGCNETVQLPGDVPIALTEEILPPRERESVIVCPRGHRKIYVLRS
Ga0318516_105379282	3300031543	Soil	MSNVLCLEPGCNETVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYV
Ga0318516_105829441	3300031543	Soil	EPGCNETVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS
Ga0318534_100432992	3300031544	Soil	MSNVLCLEPGCNETVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS
Ga0318571_101984652	3300031549	Soil	MSSVICLEPGCNETVQLPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS
Ga0318571_102113121	3300031549	Soil	VMSRVLCLEPSCNETVELPGDVPVARVSEEYLPPRERQVEIVCPQGHRNLYLLQGTP
Ga0318571_104040531	3300031549	Soil	SVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS
Ga0318528_104105022	3300031561	Soil	MSRVLCLEPGCNETVEIPEEPVAVIEEYLPPPEREIEIVCRRGHRKIYVLKY
Ga0318573_101030701	3300031564	Soil	SRVLCLEPGCNESVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS
Ga0318542_107691083	3300031668	Soil	ELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS
Ga0318572_101681012	3300031681	Soil	MSRVLCLEPSCNETVELPGDVPVARVSEEYLPPRERQVEIVCPQGHRNLYL
Ga0318560_104403621	3300031682	Soil	MSRVLCLETGCNETVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS
Ga0318560_105620202	3300031682	Soil	MSNVLCLEPGCNETVELPGDVPIALTEEILPPREREIVIVCPRG
Ga0310686_1067234385	3300031708	Soil	MSRVLCLEAGCNETVELPGDEPVAVIEEYLPPQEREIVIVCPRGHRRLYVLTS
Ga0310686_1085256521	3300031708	Soil	NESVELPGDVPIALTEEILPPREHEIVIVCPRGHRKIYVLRA
Ga0318496_107106421	3300031713	Soil	MSRVLCLEPGCNESVELPGDVPIALTEEILPPREREIVIVCPRGHRKI
Ga0318509_107574413	3300031768	Soil	VMSRVLCLEPGCNESVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS
Ga0318521_103043312	3300031770	Soil	MSSVICLEPGCNETVQLPGDVPIALTEEILPPREREIVIVCPRGHTI
Ga0318546_102290401	3300031771	Soil	MSRVLCLEPSCNETVELPGDVPVARVSEEYLPPRERQVEIVCPQGHRN
Ga0318566_102632961	3300031779	Soil	MSSVICLEPGCNETVQLPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLR
Ga0318547_109978651	3300031781	Soil	IRELRLTVMSNVLCLEPGCNETVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLR
Ga0318565_103604091	3300031799	Soil	MSRVLCLEPGCNESVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYV
Ga0318564_105489582	3300031831	Soil	MSRVLCLEPSCNETVELPGDVPVARVSEEYLPPRERQVEIVCPQGH
Ga0318517_101319411	3300031835	Soil	MSRVLCLEPSCNETVELPGDVPVARVSEEYLPPRERQVEIVCPRGHRNLYL
Ga0318512_100431693	3300031846	Soil	LPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS
Ga0318512_105368222	3300031846	Soil	CLEPGCNETVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS
Ga0318527_102905762	3300031859	Soil	MSRVLCLEPGCNETVEIPEEPVAVIEEYLPPPEREIEIVCRRGHRK
Ga0318495_101859661	3300031860	Soil	MSRVLCLEPSCNETVELPGDVPVARVSEEYLPPRERQVEIVCPRGHRNLY
Ga0316049_1026582	3300031866	Soil	MSRVLCMQPGCNETVEIPEAAVAVAEEYLPPPEREIQIVCPRGHRNVY
Ga0318544_101161522	3300031880	Soil	MSRVLCLEPSCNETVELPGDVPVARVSEEYLPPRERQVEIVCPQGHRNLYLLQGTP
Ga0318536_100599582	3300031893	Soil	MSRVLCLEPSCNETVELPGDVPVARVSEEYLPPRERQVEIVCPRGHRNLYLLQGTP
Ga0318551_106012412	3300031896	Soil	MSNVLCLEPGCNETVELPGDVPIALTEEILPPREREIVIVCPRGHRKIY
Ga0310909_103352881	3300031947	Soil	RVLCLEPSCNETVELPGDVPVARVSEEYLPPRERQVEIVCPRGHRNLYLLQGTP
Ga0306926_104963043	3300031954	Soil	NETVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS
Ga0318530_101871621	3300031959	Soil	MSRVLCLEPSCNETVELPGDVPVARVSEEYLPPRERQVEIVCPRGHRN
Ga0306922_112225401	3300032001	Soil	PGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS
Ga0306922_121377953	3300032001	Soil	RVLCLETGCNETVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS
Ga0318562_105583433	3300032008	Soil	VELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS
Ga0318563_101046013	3300032009	Soil	SRVLCLETGCNETVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS
Ga0318563_103308441	3300032009	Soil	RELRLTVMSNVLCLEPGCNETVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS
Ga0318577_105407162	3300032091	Soil	MSRVLCLEPGCNESVELPGDVPIALTEEILPPREREIVIVCPRGHR
Ga0306920_1005062332	3300032261	Soil	GCNETVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS
Ga0348332_111506932	3300032515	Plant Litter	MSRVLCLEQGCNETVELPGDVPIALTEEILPPREHEIVIVCPRGHRKIYVLRA
Ga0348332_121584592	3300032515	Plant Litter	VMSRVLCMQPGCNETVEIPEAAVAVAEEYLPPPEREIQIVCPRGHRNVYVTKSF
Ga0335079_100121443	3300032783	Soil	MSRVLCLEPGCNETVELPEEPVAVIEEYLPPQEREIVIICPRGHRKVYVMKY
Ga0335079_101391982	3300032783	Soil	MSRVLCLEPGCNESVELPGDVPVALTEEILPPREREIVIVCPRGHRKIYVLRA
Ga0335078_100910873	3300032805	Soil	MPRILCMEPGCNAMVELPADEPVAVIEEYLPPEREVEIVCPRGHRKTYVLAR
Ga0335078_102415001	3300032805	Soil	PGCNAMVELPADEPLAVIEEYLPPEREVEIVCPHGHRKTYVLAR
Ga0335078_105594872	3300032805	Soil	MSRVLCLEPGCNETVELPGDVPVAVIEEYLPPREREIEVICPRGHRKIYVLNS
Ga0335078_119414952	3300032805	Soil	MSRVMCLEPGCNETVELPGEGPVAVIEEYLPPREHEIEIICPRGHRKVYVLRA
Ga0335080_101159431	3300032828	Soil	ASMPRILCMEPGCNAMVELPADEPVAVIEEYLPPEREVEIVCPRGHRKTYVLAR
Ga0335080_104809521	3300032828	Soil	MEPGCNAMVELPADEPLAVIEEYLPPEREVEIVCPHGHRKTYVLAR
Ga0335081_110325832	3300032892	Soil	MSRVLCLEPGCNETVELPGDVPVAVIEEYLPPREREIEVICPR
Ga0335074_100408366	3300032895	Soil	MSRVLCMEPGCNETVEIPEEPVAVIEEYLPPREREIVIICPRGHRKVYVLKY
Ga0335074_100914626	3300032895	Soil	MSRVLCMEPGCNETVELPEEPVAVIEEYLPPREREIVIICPRGHRKVYVMKD
Ga0335075_107790481	3300032896	Soil	MSRVLCMEPGCNETVELPEEPVAVIDEYLPPREREIAIICPRGHRKVYVLKY
Ga0335075_110193442	3300032896	Soil	MSRVMCLEPNCNETVEIPEAPVAVAEEYLPPPEREIQIVCPRGHRNVYVTKSF
Ga0335075_113462041	3300032896	Soil	RWAAMSRVMCLEPDCNETVEIPEAPVAVAEEYLPPPEREIQIVCPRGHRNVYVTKSF
Ga0335072_100929134	3300032898	Soil	MSRVLCMEPGCNETVELPEEPVAVIEEYLPPREREIVIICPRGHRKVYVLKD
Ga0335072_102821012	3300032898	Soil	MSRVLCMEPGCNETVELPEEPVAVIDEYLPPREREIVIICPRGHRKVYVLKY
Ga0335076_103924722	3300032955	Soil	MSRVLCLEPGCNETVEIPEEPVAVIEEYLPPPEHEIEIVCPRGHRKVYVTST
Ga0335076_104031481	3300032955	Soil	MSRVMCLEPDCNETVEIPEAPVAVAEEYLPPPEREIQIVCPKGHRNVYVTKSF
Ga0335076_111637141	3300032955	Soil	MEPGCNAMVELPADEPIAVIEEYLPPEREVEIVCPNGHRKTYVLAR
Ga0335073_1000785018	3300033134	Soil	MSRVLCLEPGCNETVELPEEPVAVIEEYLPPQEREIVIICPRGHRKVYVLKY
Ga0335077_119286432	3300033158	Soil	VICLEPGCNESVELPGDVPIALTEEILPPREREIVIVCPRGHRKIYVLRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042469

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences