Metagenome / Metatranscriptome Family F042544

Basic Information
Family ID	F042544
Family Type	Metagenome / Metatranscriptome
Number of Sequences	158
Average Sequence Length	42 residues
Representative Sequence	MRRFPAPWTVEQIPGGYKVLDANGQSLAYVYGRETKADA
Number of Associated Samples	120
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	30.00 %
% of genes near scaffold ends (potentially truncated)	81.01 %
% of genes from short scaffolds (< 2000 bps)	91.77 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Most Common Taxonomy
Group	Unclassified (57.595 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.392 % of family members)
Environment Ontology (ENVO)	Unclassified (22.152 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.165 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.48% β-sheet: 23.88% Coil/Unstructured: 71.64%
Feature Viewer

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Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF09538	FYDLN_acid	1.90
PF00582	Usp	1.27
PF00275	EPSP_synthase	1.27
PF09361	Phasin_2	1.27
PF05532	CsbD	0.63
PF13561	adh_short_C2	0.63
PF13439	Glyco_transf_4	0.63
PF13239	2TM	0.63
PF13396	PLDc_N	0.63
PF05656	DUF805	0.63
PF00589	Phage_integrase	0.63
PF02780	Transketolase_C	0.63
PF06347	SH3_4	0.63
PF00528	BPD_transp_1	0.63
PF06041	DUF924	0.63
PF02796	HTH_7	0.63
PF02735	Ku	0.63
PF05448	AXE1	0.63
PF14248	DUF4345	0.63
PF13442	Cytochrome_CBB3	0.63
PF01068	DNA_ligase_A_M	0.63
PF10576	EndIII_4Fe-2S	0.63
PF03625	DUF302	0.63
PF03466	LysR_substrate	0.63
PF03350	UPF0114	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.63
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.63
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	0.63
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.63
COG2862	Uncharacterized membrane protein YqhA	Function unknown [S]	0.63
COG3152	Uncharacterized membrane protein YhaH, DUF805 family	Function unknown [S]	0.63
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.63
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	0.63
COG3458	Cephalosporin-C deacetylase or related acetyl esterase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.63
COG3803	Uncharacterized conserved protein, DUF924 family	Function unknown [S]	0.63

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.59 %
All Organisms	root	All Organisms	42.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.59 %
cellular organisms	root	All Organisms → cellular organisms	42.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.59 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	38.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.65 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20.89 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.27 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.59 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	5.06 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	5.06 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.63 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.59 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.06 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1.90 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.27 %
Methyloligella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella	0.63 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.63 %
Tistrella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella	0.63 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.59 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.06 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.27 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.63 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.63 %
Methyloceanibacter methanicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	0.63 %
Tistrella mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	0.63 %
unclassified Hyphomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium	0.63 %
Methyloligella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.59 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.06 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.27 %
Hyphomicrobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	0.63 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.63 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.63 %
Methyloceanibacter methanicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	0.63 %
Tistrella mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	0.63 %
Methyloligella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|F0B48LX02G9YMD	Not Available	513	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104294892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	644	Open in IMG/M
3300000886\|AL3A1W_1014041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1070	Open in IMG/M
3300000955\|JGI1027J12803_106236167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1163	Open in IMG/M
3300001991\|JGI24743J22301_10145783	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300002077\|JGI24744J21845_10052798	Not Available	748	Open in IMG/M
3300002239\|JGI24034J26672_10011965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1304	Open in IMG/M
3300004157\|Ga0062590_100907369	Not Available	826	Open in IMG/M
3300004463\|Ga0063356_105774847	Not Available	531	Open in IMG/M
3300004479\|Ga0062595_100381140	Not Available	999	Open in IMG/M
3300004798\|Ga0058859_11812887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	985	Open in IMG/M
3300004803\|Ga0058862_12633043	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300005093\|Ga0062594_100621253	All Organisms → cellular organisms → Bacteria → Proteobacteria	953	Open in IMG/M
3300005093\|Ga0062594_102593677	Not Available	559	Open in IMG/M
3300005332\|Ga0066388_101152186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1319	Open in IMG/M
3300005332\|Ga0066388_101561767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1158	Open in IMG/M
3300005332\|Ga0066388_101897844	Not Available	1063	Open in IMG/M
3300005332\|Ga0066388_102018761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	1034	Open in IMG/M
3300005332\|Ga0066388_102362745	Not Available	963	Open in IMG/M
3300005332\|Ga0066388_103067761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	853	Open in IMG/M
3300005332\|Ga0066388_107435142	Not Available	550	Open in IMG/M
3300005332\|Ga0066388_107588290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300005347\|Ga0070668_100184101	Not Available	1708	Open in IMG/M
3300005347\|Ga0070668_100790347	Not Available	842	Open in IMG/M
3300005364\|Ga0070673_100072991	Not Available	2761	Open in IMG/M
3300005439\|Ga0070711_101146864	Not Available	671	Open in IMG/M
3300005440\|Ga0070705_100152149	All Organisms → cellular organisms → Bacteria → Proteobacteria	1536	Open in IMG/M
3300005536\|Ga0070697_101728231	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300005548\|Ga0070665_101736680	Not Available	631	Open in IMG/M
3300005713\|Ga0066905_100952072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	754	Open in IMG/M
3300005713\|Ga0066905_101221627	Not Available	673	Open in IMG/M
3300005764\|Ga0066903_102312349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1038	Open in IMG/M
3300005764\|Ga0066903_104224804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	768	Open in IMG/M
3300005764\|Ga0066903_105640877	Not Available	659	Open in IMG/M
3300005764\|Ga0066903_106593536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	604	Open in IMG/M
3300005764\|Ga0066903_107313395	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300005764\|Ga0066903_108702169	Not Available	516	Open in IMG/M
3300005841\|Ga0068863_102233000	Not Available	557	Open in IMG/M
3300005843\|Ga0068860_101246653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	764	Open in IMG/M
3300005844\|Ga0068862_102348728	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300006049\|Ga0075417_10007780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3809	Open in IMG/M
3300006172\|Ga0075018_10092419	Not Available	1330	Open in IMG/M
3300006175\|Ga0070712_101015289	Not Available	718	Open in IMG/M
3300006237\|Ga0097621_101415968	Not Available	658	Open in IMG/M
3300006845\|Ga0075421_102034016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	611	Open in IMG/M
3300006847\|Ga0075431_100966188	Not Available	820	Open in IMG/M
3300006854\|Ga0075425_101052412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	928	Open in IMG/M
3300006854\|Ga0075425_101609419	All Organisms → cellular organisms → Bacteria → Proteobacteria	732	Open in IMG/M
3300006854\|Ga0075425_102521666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	569	Open in IMG/M
3300006871\|Ga0075434_101451436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	696	Open in IMG/M
3300006904\|Ga0075424_100145194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2513	Open in IMG/M
3300006904\|Ga0075424_101511190	All Organisms → cellular organisms → Bacteria → Proteobacteria	713	Open in IMG/M
3300006954\|Ga0079219_10046620	Not Available	1838	Open in IMG/M
3300009093\|Ga0105240_11730135	Not Available	652	Open in IMG/M
3300009094\|Ga0111539_10919977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1017	Open in IMG/M
3300009101\|Ga0105247_10067929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2222	Open in IMG/M
3300009148\|Ga0105243_10206848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1725	Open in IMG/M
3300009162\|Ga0075423_10886874	Not Available	945	Open in IMG/M
3300009166\|Ga0105100_10628847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	659	Open in IMG/M
3300009551\|Ga0105238_10593758	All Organisms → cellular organisms → Bacteria → Proteobacteria	1115	Open in IMG/M
3300010048\|Ga0126373_12482744	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M
3300010358\|Ga0126370_12249184	Not Available	538	Open in IMG/M
3300010359\|Ga0126376_11706649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	665	Open in IMG/M
3300010366\|Ga0126379_10188541	Not Available	1970	Open in IMG/M
3300010371\|Ga0134125_12655794	Not Available	544	Open in IMG/M
3300010373\|Ga0134128_10323310	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1725	Open in IMG/M
3300010376\|Ga0126381_100982160	All Organisms → cellular organisms → Bacteria → Proteobacteria	1218	Open in IMG/M
3300010379\|Ga0136449_100961491	Not Available	1381	Open in IMG/M
3300010379\|Ga0136449_103230314	Not Available	629	Open in IMG/M
3300010396\|Ga0134126_12052730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	625	Open in IMG/M
3300012362\|Ga0137361_10744523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	894	Open in IMG/M
3300012899\|Ga0157299_10127839	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300012903\|Ga0157289_10288032	Not Available	575	Open in IMG/M
3300012907\|Ga0157283_10019729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1261	Open in IMG/M
3300012908\|Ga0157286_10097805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300012951\|Ga0164300_10222653	Not Available	939	Open in IMG/M
3300012951\|Ga0164300_10326960	Not Available	813	Open in IMG/M
3300012957\|Ga0164303_10078207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1569	Open in IMG/M
3300012957\|Ga0164303_10782763	Not Available	654	Open in IMG/M
3300012960\|Ga0164301_11124966	Not Available	626	Open in IMG/M
3300012960\|Ga0164301_11149343	Not Available	620	Open in IMG/M
3300012960\|Ga0164301_11847063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	509	Open in IMG/M
3300012971\|Ga0126369_10525098	Not Available	1245	Open in IMG/M
3300012971\|Ga0126369_11935303	Not Available	678	Open in IMG/M
3300012989\|Ga0164305_10332568	Not Available	1136	Open in IMG/M
3300013096\|Ga0157307_1070422	Not Available	692	Open in IMG/M
3300013105\|Ga0157369_11081518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	820	Open in IMG/M
3300013297\|Ga0157378_10643699	Not Available	1075	Open in IMG/M
3300013764\|Ga0120111_1103309	Not Available	671	Open in IMG/M
3300014969\|Ga0157376_12665052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	540	Open in IMG/M
3300015077\|Ga0173483_10072450	Not Available	1372	Open in IMG/M
3300015077\|Ga0173483_10554752	Not Available	623	Open in IMG/M
3300015371\|Ga0132258_12608356	Not Available	1262	Open in IMG/M
3300016294\|Ga0182041_10670682	Not Available	917	Open in IMG/M
3300016319\|Ga0182033_10288071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella	1350	Open in IMG/M
3300016319\|Ga0182033_10667989	Not Available	908	Open in IMG/M
3300016357\|Ga0182032_11728241	Not Available	546	Open in IMG/M
3300016371\|Ga0182034_10113066	Not Available	1973	Open in IMG/M
3300016371\|Ga0182034_11736934	Not Available	549	Open in IMG/M
3300016445\|Ga0182038_10223381	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300017792\|Ga0163161_10948422	Not Available	732	Open in IMG/M
3300017961\|Ga0187778_10086534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1938	Open in IMG/M
3300017995\|Ga0187816_10120377	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300018014\|Ga0187860_1313209	Not Available	605	Open in IMG/M
3300018058\|Ga0187766_10041210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	2701	Open in IMG/M
3300018081\|Ga0184625_10143581	Not Available	1246	Open in IMG/M
3300020078\|Ga0206352_10831567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	985	Open in IMG/M
3300021078\|Ga0210381_10411866	Not Available	501	Open in IMG/M
3300021560\|Ga0126371_10720849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1145	Open in IMG/M
3300021560\|Ga0126371_11700613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	755	Open in IMG/M
3300022220\|Ga0224513_10485716	Not Available	504	Open in IMG/M
3300022467\|Ga0224712_10146874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1042	Open in IMG/M
3300023102\|Ga0247754_1098597	Not Available	705	Open in IMG/M
3300025917\|Ga0207660_10936988	Not Available	707	Open in IMG/M
3300025919\|Ga0207657_10328297	Not Available	1209	Open in IMG/M
3300025920\|Ga0207649_10260208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1254	Open in IMG/M
3300025932\|Ga0207690_11467960	Not Available	570	Open in IMG/M
3300025960\|Ga0207651_10476167	Not Available	1075	Open in IMG/M
3300025961\|Ga0207712_11300309	Not Available	650	Open in IMG/M
3300025986\|Ga0207658_12136333	Not Available	509	Open in IMG/M
3300026088\|Ga0207641_11961216	Not Available	587	Open in IMG/M
3300026118\|Ga0207675_100191348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1962	Open in IMG/M
3300026118\|Ga0207675_101627935	Not Available	666	Open in IMG/M
3300027662\|Ga0208565_1153720	Not Available	670	Open in IMG/M
3300028587\|Ga0247828_10756670	Not Available	611	Open in IMG/M
3300028587\|Ga0247828_10876094	Not Available	576	Open in IMG/M
3300028592\|Ga0247822_11080536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	665	Open in IMG/M
3300028592\|Ga0247822_11499149	Not Available	570	Open in IMG/M
3300028791\|Ga0307290_10154180	Not Available	842	Open in IMG/M
3300031226\|Ga0307497_10165565	Not Available	931	Open in IMG/M
3300031226\|Ga0307497_10373666	Not Available	674	Open in IMG/M
3300031573\|Ga0310915_10472299	Not Available	891	Open in IMG/M
3300031573\|Ga0310915_11158929	Not Available	536	Open in IMG/M
3300031640\|Ga0318555_10824110	Not Available	501	Open in IMG/M
3300031719\|Ga0306917_10168001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1641	Open in IMG/M
3300031740\|Ga0307468_100096063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1745	Open in IMG/M
3300031744\|Ga0306918_10356241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	1136	Open in IMG/M
3300031854\|Ga0310904_10578869	Not Available	763	Open in IMG/M
3300031890\|Ga0306925_11332100	Not Available	712	Open in IMG/M
3300031910\|Ga0306923_10364947	Not Available	1646	Open in IMG/M
3300031910\|Ga0306923_10880085	Not Available	983	Open in IMG/M
3300031912\|Ga0306921_10298472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1887	Open in IMG/M
3300031912\|Ga0306921_11439280	Not Available	756	Open in IMG/M
3300031942\|Ga0310916_11220033	Not Available	621	Open in IMG/M
3300031946\|Ga0310910_10848855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	718	Open in IMG/M
3300031952\|Ga0315294_11201609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	615	Open in IMG/M
3300031954\|Ga0306926_12488867	Not Available	568	Open in IMG/M
3300032075\|Ga0310890_10806184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	744	Open in IMG/M
3300032076\|Ga0306924_11937651	Not Available	609	Open in IMG/M
3300032261\|Ga0306920_101604613	Not Available	925	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.89%
Host-Associated	Host-Associated	29.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.56%
Plants	Host-Associated → Plants	27.85%
Aquatic	Environmental → Aquatic	6.33%
Human	Host-Associated → Human	1.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.99%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.59%
Freshwater	Environmental → Aquatic → Freshwater	3.16%
Sediment	Environmental → Aquatic → Sediment	2.53%
Digestive System	Host-Associated → Human → Digestive System	1.27%
Roots	Host-Associated → Plants → Roots	1.27%
Marine	Environmental → Aquatic → Marine	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Loam	Environmental → Terrestrial → Soil → Loam	13.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.53%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.27%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.27%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.27%
Lake	Environmental → Aquatic → Freshwater → Lake	0.63%
Sediment	Environmental → Aquatic → Marine → Sediment	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.43%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.16%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.53%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.27%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.27%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.27%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.63%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.63%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.13%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.53%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.90%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.27%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.27%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.27%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.27%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.63%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.63%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.63%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.63%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.63%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.63%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.63%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.63%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.63%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000886	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-65cm-3A)- 1 week illumina	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300002077	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3	Host-Associated	Open in IMG/M
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022220	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_21	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300025766	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-three (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_09011340	2170459002	Grass Soil	RRYPVPWTVETIPGGLKVCDANGQSLADVYSRENPKDAHMAKVLNED
INPhiseqgaiiFebDRAFT_1042948921	3300000364	Soil	MAARRFPPPWTVEQIPGGFKVLDANNQSLAYVYGRE
AL3A1W_10140413	3300000886	Permafrost	MPEQKTRRFPPPWSSEQIPGGYVVKDATGQSLAYVYGRENRADADTAK
JGI1027J12803_1062361671	3300000955	Soil	MRRCPPPWTVEKIPGGFKVLDANGQSLAYVYLRETKANA
JGI24743J22301_101457832	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	MPEDRTRRFPPPWTVEQIAGGYKVKDANGQSLTYVYGRETQADADI
JGI24744J21845_100527981	3300002077	Corn, Switchgrass And Miscanthus Rhizosphere	MTQRRFPPPWRVEEITAGYVVKNANGQSLAYVYGRETRADADT
JGI24034J26672_100119651	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	MPEDRTRRFPPPWTVEQIAGGYKVKDANGQSLTYVYGRET
Ga0062593_1019229792	3300004114	Soil	VCLLRRFPPPWFIEKIPGGLKVCDANGQSLAYVCSRENPNDADMAKVLT*
Ga0062590_1009073692	3300004157	Soil	MRRFPPPWTVEKIPGGFKVIIAYVYSRDNDSDALIANVLTTDEAR
Ga0063356_1057748471	3300004463	Arabidopsis Thaliana Rhizosphere	MRRFPPPWTVEKIAGGFKVCDANGQSLAYVYSSENPNDAFMR
Ga0062595_1003811401	3300004479	Soil	MSDSSELDEGHRRFPPPWTVEPIQVKDANGQSLAYVYGRET
Ga0058859_118128871	3300004798	Host-Associated	MPEDRTRRFPPPWTVEQIAGGYKVKDANGQSLTYVYGRETQADAD
Ga0058862_126330431	3300004803	Host-Associated	MPEDRTRRFPPPWTVEQIAGGYKVKDANGQSLTYVYGRETQADADIA
Ga0062594_1006212532	3300005093	Soil	MRRFPAPWTVEKIPGGFKVIDANGQSLAYVYGRETKADADIAKC*
Ga0062594_1025936772	3300005093	Soil	MRRFPAPWTVEKIPGGFKVIDANGQSLAYVYSRDNPNDAK*
Ga0066388_1011521861	3300005332	Tropical Forest Soil	VRRFPAPWTVEQIPGGYKVLDASGQSLAYVYGRETKADAARC*
Ga0066388_1015617672	3300005332	Tropical Forest Soil	MSEQHTRRFPPPWTVEPIERGFKVVDANKQSIAYVYGRETKAGADYRAWALLMVP*
Ga0066388_1018978442	3300005332	Tropical Forest Soil	MTRGRFPPSWTVEQIPGGYKVIDANGQPLAYVYGRETKADAD
Ga0066388_1020187611	3300005332	Tropical Forest Soil	KRFPAPWSIEQIPGGYKVKDANGQSLAYVYGRETKADAE*
Ga0066388_1023627453	3300005332	Tropical Forest Soil	MTRGRFPPPWTVERIPGGYKVKDANGQSLAYVYRRETSGC*
Ga0066388_1030677611	3300005332	Tropical Forest Soil	MLEQNTRCFPPPWTVEQIPGGFKVKDANGQSLAYIYGRESRAD
Ga0066388_1074351421	3300005332	Tropical Forest Soil	VRRFSAPWTVEQIPGGYKVKDANRQSLAYVYGRETKADADT
Ga0066388_1075882903	3300005332	Tropical Forest Soil	MARRFPPPWIVEKIPGGFKVLDANGHSLAYVYSCETKEAAN
Ga0070668_1001841014	3300005347	Switchgrass Rhizosphere	RFPAPWTVEKIPGGFKVIDANGQSLAYVYGRETKADADIAKC*
Ga0070668_1007903471	3300005347	Switchgrass Rhizosphere	MATDRHFPPPWTVEQIAAAYKVKDATGQALAYIYGREARA
Ga0070674_1010756232	3300005356	Miscanthus Rhizosphere	SIGFNRRSVCLLRRFPPPWFIEKIPGGLKVCDANGQSLAYVCSRENPNDADMAKVLT*
Ga0070674_1014741972	3300005356	Miscanthus Rhizosphere	MSDSSELDEGHRRFPPPWTVEPIQVKDANGQSLAYVYGRETRAAADIAHVLS*
Ga0070673_1000729918	3300005364	Switchgrass Rhizosphere	MPEQSTRRFPPPWSVEQIPGGYKVKDAHGQSLVYVYGREI
Ga0070711_1011468641	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LTIARKLPTSWKAERIPGGYVVKDATSQSLAYVYAGETKADADTPLPNV
Ga0070705_1001521491	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRRFPPPWTVEKIPGGFKVIDANGQSLAYVYGRETKADADIAKC*
Ga0070697_1017282311	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRRFPPPWTVKTIPGGLKVCDANGQSLAYVYLREKPSDAHIGS
Ga0070665_1017366802	3300005548	Switchgrass Rhizosphere	MSDSSELDEGHRRFPPPWTVEPIQVKDANGQSLAYVYGRETQA
Ga0066905_1009520721	3300005713	Tropical Forest Soil	MRRFPAPWTVEKIAGGFKVCDANGQSLAYVYSSENPNDAFMR
Ga0066905_1012216271	3300005713	Tropical Forest Soil	MTEQNIRRFPPPWTVEQIPGGYKVNDANGQSVAYVYGR
Ga0066903_1023123491	3300005764	Tropical Forest Soil	RRFPPPWTVEQIPGGFNVKDATGQPLAYVYGRRQKPMPT*
Ga0066903_1042248043	3300005764	Tropical Forest Soil	VNALKQKRFPAPWSIEQIPGGYKVKDANGQSLAYVYGRETKADAE*
Ga0066903_1056408772	3300005764	Tropical Forest Soil	LLLFPPPWSVEQIPGGYNEGANGQSLAYVYGRET*
Ga0066903_1065935362	3300005764	Tropical Forest Soil	PMRRFPPPWTVEQIPGGFKVLDATGQSLAYVYGCETKADARMC*
Ga0066903_1073133952	3300005764	Tropical Forest Soil	MRRFPPPWTVEQIPGGYKILDANGQSLAYVYGRETKADAD
Ga0066903_1087021691	3300005764	Tropical Forest Soil	MRRFPPPWTVEKIPGGYKVKDANGQSLAYVYGRETKADADI
Ga0068863_1022330001	3300005841	Switchgrass Rhizosphere	MRRFPAPWTVEKIPGGFKVIDANGQSLAYVYSRDN
Ga0068860_1012466531	3300005843	Switchgrass Rhizosphere	MSDSSELDEGHRRFPPPWTVEPIQVKDANGQSLAYVYGR*
Ga0068862_1023487282	3300005844	Switchgrass Rhizosphere	MTQRNDRTRLSPPWSVEKIPGGLKGRDANGQSLAYVYSRENPNDA
Ga0075417_100077801	3300006049	Populus Rhizosphere	MPEQNTRRFPPPWTVEQIPATYKVKDTNGRSLAYVYGRETRADADTAH
Ga0075017_1016868331	3300006059	Watersheds	MTERRFPPPWTVVKIPGGLKVCDANGQSLAYIYSRETPADAITAHVLTE
Ga0075018_100924193	3300006172	Watersheds	MRRFPPPWTVETIPGGFKVIDANGQSLAYVYSRETRQT*
Ga0070712_1010152891	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTRRFPPPWTGEEIPGGFKVIDANGQSLAYCYGRETQADADI
Ga0097621_1010915982	3300006237	Miscanthus Rhizosphere	MSDSSELDEGHRRFPPPWTVEPIQVKDANGQSLAYVYGRETQADADIAHVLTMDETGREGT*
Ga0097621_1014159681	3300006237	Miscanthus Rhizosphere	MRRFPAPWTVEKIPGGFKVIDANGQSLAYVYSRDNPNDA
Ga0075421_1020340163	3300006845	Populus Rhizosphere	LRRFPPPWTVEHIPGGYKVKDANGQSLAYVYGRETRAD
Ga0075431_1009661881	3300006847	Populus Rhizosphere	MRRFPAPWTVEKIPGGFKLYDANGQSLAYVYARDNPNDAQI
Ga0075425_1010524123	3300006854	Populus Rhizosphere	LRRFPPPWTVEHIPGGYKVKDANGQSLAYVYGRET
Ga0075425_1016094191	3300006854	Populus Rhizosphere	MRRFPAPWTVEQIPGGYKVLDANGQSLAYVYGRETK
Ga0075425_1025216662	3300006854	Populus Rhizosphere	MRRPPPWTVEKMPGGLKVVDAKGQSLAYVYSRENANDAAIAKD*
Ga0075434_1014514361	3300006871	Populus Rhizosphere	MPARRFPKPWTVKQIPGGCRIIDASGVAVAYVYGR
Ga0075424_1001451941	3300006904	Populus Rhizosphere	MTQRRFPPPWRVEEITAGYVVKNANGQSLAYVYGR
Ga0075424_1015111902	3300006904	Populus Rhizosphere	MRRFPAPWTVEQIPGGYKVLDANGQSLAYVYGRETKADA*
Ga0079219_100466201	3300006954	Agricultural Soil	PWTVEQIPGGYKVNDANGQSLAYIYGRETQADATSPAF*
Ga0105240_117301353	3300009093	Corn Rhizosphere	MATDRCFPPPWTVEQIPGGYKVKDASGQALAYVYGRE
Ga0111539_109199773	3300009094	Populus Rhizosphere	MRRFPAPWTVEKIPGGFKVNDANGQSLAYVYGRETRADADIAN
Ga0105247_100679294	3300009101	Switchgrass Rhizosphere	MRRFPAPWTVEKIPGGFTVIDANGQSLAYVYSRDNPNDAK*
Ga0105243_102068481	3300009148	Miscanthus Rhizosphere	MARRLPAPWTVEKIPGGFKVYDANGQSLAYVYSRDNPNDAK*
Ga0075423_108868742	3300009162	Populus Rhizosphere	MSEQGPRQFPPPWTVEEIPGGYKVKDANGQSLAYVYGRETR
Ga0105100_106288473	3300009166	Freshwater Sediment	VRRFPAPWTAEQIPGGFNVVDATGQAIAYCYGREKKADADI
Ga0105238_105937583	3300009551	Corn Rhizosphere	MRRFPAPWTVEKIPGGFKVIDANGQSLAYVYGRETK
Ga0126373_124827442	3300010048	Tropical Forest Soil	PPPWTVEQIPGGFKVVDANGQSLAYVYGRETKADADSA*
Ga0126370_122491842	3300010358	Tropical Forest Soil	VNALKQKRFPAPWSIEQIPGGYKVKDANGQSLAYVYARETKADAE*
Ga0126376_117066491	3300010359	Tropical Forest Soil	MRRFPAPWTVERVAGGFKVLDANGQSLAYVYSRETKDANK*
Ga0126379_101885411	3300010366	Tropical Forest Soil	MRRFAPPWTVEQIPGGYKVKDAYGQSLAYVYGRETKAE
Ga0134125_126557941	3300010371	Terrestrial Soil	MRRFPPPWTVEQCAGGYKVLDANGQSLAYVYGYAHPR
Ga0134128_103233101	3300010373	Terrestrial Soil	MTGRRFPPPWTIERLAGGFKVVDANGQSLAYVYSRENPNDAHM
Ga0126381_1009821601	3300010376	Tropical Forest Soil	MSRRFLPPWTVEQIPGGYKVKDANGQSLACVYGRETRADAWGNP*
Ga0136449_1009614911	3300010379	Peatlands Soil	MWSWMRRFPPPWTKIPGGIKVLDANGQSLAYVYSRQDPRE
Ga0136449_1032303142	3300010379	Peatlands Soil	MIERRFPPPWTVEKIPGGLKVGDANRQSLAYVYSRENEGDAVIA
Ga0134126_120527301	3300010396	Terrestrial Soil	MSERRFPPPWTVETIPGGLKVCDANGQSLAYVYSREN
Ga0137361_107445232	3300012362	Vadose Zone Soil	MSDQRTRRFPAPWTAEQIPGGYVVKDATGQALAYVYGRKDKG
Ga0157299_101278392	3300012899	Soil	MSDSSELDEGHRRFPPPWTVEPIQVKDANGQSLAYVYG
Ga0157289_102880322	3300012903	Soil	MSEQGPRQFPPPWTVEEIPGGYKVNDANGQSLAYVYGRETRAHAD
Ga0157283_100197294	3300012907	Soil	MPEDRTRRFPPPWTVEQIAGGYKVKDANGQSLTYVYGR
Ga0157286_100978052	3300012908	Soil	MPEQSTRRFPPPWTVEQIPGGYKVKDATGQALAYVYGRETRAEAD
Ga0164300_102226531	3300012951	Soil	MTERRFPPPWTVEKIPGGLKVCDANGQSLAYVYSREFAPDFSRTYCV
Ga0164300_103269602	3300012951	Soil	MSERRFSPPWSVETIPGGFKVCDANGQSLAYVDSRENAN
Ga0164303_100782074	3300012957	Soil	MSERRFPPPWSVETIPGGFKVCDANGQSLAYVYSRENPNDAHMAKV
Ga0164303_107827633	3300012957	Soil	MTQRRFPPPWRVEEITAGYVVKNANGQSLAYVYGRE
Ga0164301_111249662	3300012960	Soil	MSERRFSPPWSVETIPGGFKVCDANGQSLAYVDSRENANNAHMAKVL
Ga0164301_111493431	3300012960	Soil	RRFPPPWTVEKIPGGLKVIDANGQSLAYVYSRENANDAACQSADRG*
Ga0164301_118470631	3300012960	Soil	MRRFPAPWSVEKIPAGLVVRDANGQSLAYVYYRENDSDA
Ga0126369_105250983	3300012971	Tropical Forest Soil	MAHRRFPPPWTVEQIPGGYKVKDANGQSLGYVYARETKADADI
Ga0126369_119353031	3300012971	Tropical Forest Soil	MPRHFPPPWTVEQIPGGYKVRDATGQSLAYVYGRETKADANIAH
Ga0164305_103325685	3300012989	Soil	MRRFPVPWTVETIPGGFKVIDANGQSLAYVYSREDAHMAKV
Ga0157307_10704223	3300013096	Soil	LPMRRFPAPWTVETIEGGFKVVDANKQVVAYVYVCR*
Ga0157369_110815182	3300013105	Corn Rhizosphere	MPEQTTSRFPPPWTVEQIAGGYKVKDANGQSLAYVYGRET
Ga0157378_106436991	3300013297	Miscanthus Rhizosphere	MRRFPAPWTVEKIPGGFKVIDVNGQSLAYVYSRDNPNDAK*
Ga0120111_11033092	3300013764	Permafrost	MNTRRFPPPWSEQIPGGYVVKEATGQSLAYVYGRETR
Ga0157376_126650522	3300014969	Miscanthus Rhizosphere	MPEQNTRRYTAVNSRADAGGYKVKDAHGQSLAYVYGRETRADADTAGVLTLNE
Ga0173483_100724501	3300015077	Soil	MSDSSELDEGHRRFPPPWTVEPIQVKDANGQSLAYVYGRETQADAD
Ga0173483_105547522	3300015077	Soil	MTQRRFPPPWAVEQIPGGYKVKDANGQSLAYVYGRETRADAD
Ga0132258_126083561	3300015371	Arabidopsis Rhizosphere	MATDRCFPPPWTVEQIPGGYKVKDASGQAFAYVYGRETRA
Ga0182041_106706821	3300016294	Soil	VVEHRNPPWTVEQIPGGYKVKVATGQSLAYVYGRET
Ga0182041_108660192	3300016294	Soil	MQTRFPPPSTVEQIPGGYKVLDANGQSLAYVYARETKA
Ga0182033_102880713	3300016319	Soil	MRRFPPPWSAEKIAGGFKVLDANGQSLVYVYSRETKD
Ga0182033_106679891	3300016319	Soil	PGGRFFLMPEERTRHFPPPWTVEQIPGGHKVKDATGQSLL
Ga0182032_117282411	3300016357	Soil	MRRFPAPWTVEQIPGGYKVLDANGQSLAYQVHGRAAVNV
Ga0182034_101130665	3300016371	Soil	MNKTRRMRRFPPPWTVEQIPGGYKVLDANGQSLAYVYVREK
Ga0182034_117369341	3300016371	Soil	MRRFPPPWTVEQIPGGYKVKDANGQSLAYVYGRETK
Ga0182038_102233812	3300016445	Soil	MVDRARRFPLPWTVEQIRGGYKVLDANGQSLAYVYGRETKADADI
Ga0163161_109484222	3300017792	Switchgrass Rhizosphere	MRRFPAPWTVEKIPGGFKVIDANGQSLAYVYSRDNPNDAK
Ga0187778_100865343	3300017961	Tropical Peatland	MKTGRRFPPPWTVERIEGGFKVVDANRQSLAYVYSRETERDA
Ga0187816_101203774	3300017995	Freshwater Sediment	PMRRFPPPWTVEKIPGGLKVCDANGQSLAYVSSREKPDDARDGKGG
Ga0187860_13132092	3300018014	Peatland	MIERRFPPPWTVEKIPGGLKVCDANGQSLAYVYSREN
Ga0187766_100412105	3300018058	Tropical Peatland	MKTGRRFPPPWTVERIEGGFKVVDADRQSLAYVYSRETERDA
Ga0184625_101435812	3300018081	Groundwater Sediment	MSERKFPPPWSVEKIPDGLKVCDANGQSLAYVYSRENR
Ga0206352_108315673	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MPEDRTRRFPPPWTVEQIAGGYKVKDANGQSLTYVYGRETQADTD
Ga0210381_104118661	3300021078	Groundwater Sediment	MRRFPPPWTVEKIPGGFKVIDANGQPLAYVYSHEGALVHIAN
Ga0126371_107208491	3300021560	Tropical Forest Soil	VRRFPPPWTVEQIPGGYKVKDANDQSLAYVYGRESE
Ga0126371_117006132	3300021560	Tropical Forest Soil	MRRFPAPWTIESIPGGYKVLDANGQSLAYVYGRETKADADIAN
Ga0224513_104857161	3300022220	Sediment	PRRRFPPPWSVEQIPGGYQVIDATGQALVYIYARVDLRKE
Ga0224712_101468741	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MPEDRTRRFPPPWTVEQIAGGYKVKDANGQSLTYVYGRETQAD
Ga0222622_103588101	3300022756	Groundwater Sediment	MSERKFTPPWSVEKIPGGLKVCDANGQSLAYYSRENSSDAHMAKVLTE
Ga0247754_10985972	3300023102	Soil	MPEQSTRRFPPPWSVEQIPGGYKVKDAHGQSLVYVYGREIRADADTP
Ga0209280_10113821	3300025766	Arctic Peat Soil	MNRRFPAPWSAEQIPGGFKVVDTAGQSLAYVYARETKAQADAAKV
Ga0207660_109369882	3300025917	Corn Rhizosphere	PAPWTVEKIPGGFKVIDANGQSLAYVYSRDNPNDAK
Ga0207657_103282971	3300025919	Corn Rhizosphere	RFPAPWTVEKIPGGFKVIDANGQSLAYVYGRETKADADIAKC
Ga0207649_102602081	3300025920	Corn Rhizosphere	SPMRRFPAPWTVEKIPGGFKVIDANGQSLAYVYSRDNPNDAK
Ga0207690_114679601	3300025932	Corn Rhizosphere	MPEQSTRRFPPPWSVEQIPGGYKVKDAHGQSLVYVYGREIRGRLP
Ga0207651_104761671	3300025960	Switchgrass Rhizosphere	TSPVASPMRRFPAPWTVEKIPGGFKVIDANGQSLAYVYSRDNPNDAK
Ga0207712_113003092	3300025961	Switchgrass Rhizosphere	MSDSSELDEGHRRFPPPWTVEPIQVKDANGQSLAYVYGRETQADADI
Ga0207658_121363331	3300025986	Switchgrass Rhizosphere	MSDSSELDEGHRRFPPPWTVEPIQVKDANGQSLAYVYGRETQADA
Ga0207641_119612161	3300026088	Switchgrass Rhizosphere	MPEQSTRRSPPPWSVEQIPGGFKVKGANGQSLAYVYGRETRTDAADL
Ga0207675_1001913481	3300026118	Switchgrass Rhizosphere	KPAWLHRCTSPVASPMRRFPAPWTVEKIPGGFKVIDANGQSLAYVYSRDNPNDAK
Ga0207675_1016279351	3300026118	Switchgrass Rhizosphere	MTERRFPPPWSVETFPGGLKVCDANGQSLAYVYSRENASDAHE
Ga0208565_11537201	3300027662	Peatlands Soil	MIERRFPPPWTVEQIPGGLKVCDANGQSLAYVYSRENEGDA
Ga0247828_107566701	3300028587	Soil	PWTVEKIPGGLKVCDANGQSLAYIYSRENPNDAHMG
Ga0247828_108760941	3300028587	Soil	MSERKFPPPWTVETIPGGLKVCGANGQSLAYVYSRESPNDAYMAKF
Ga0247822_110805361	3300028592	Soil	MRRFPPPWSVEKIPGGLKVCDADGQSLAYVYSRENANDAHMA
Ga0247822_114991491	3300028592	Soil	ERRCPPPWTVEKIPGGLKVCNGNGQSLAYVYSRENPNDAHMG
Ga0307290_101541801	3300028791	Soil	MSERKFPPPWSVEKIPGGLKVCDANGQSLAYVYSRENPRRP
Ga0307497_101655652	3300031226	Soil	MRRFPAPWTVEAIEAGFKVLDANKQAIAYVYSREYPSDALIARY
Ga0307497_103736661	3300031226	Soil	MRRFPAPWTVEAIEAGFKVLDANKQAIAYVYSREYPS
Ga0310915_104722993	3300031573	Soil	WSVEQIPGGYKVLDADGQSLAYVYGCETKADADIAKY
Ga0310915_111589291	3300031573	Soil	MRRFPPPWTVERIARVIDANGQSLAYVYSRETKDANK
Ga0318555_108241101	3300031640	Soil	MRRFPPPWTIEQIPGGYKVLDANGQSLAYVYGRETKAAAD
Ga0306917_101680014	3300031719	Soil	VTAATGLMRRFPAPWTVEKIAGGFKVIDANGQSLVYVYSRE
Ga0307468_1000960633	3300031740	Hardwood Forest Soil	MRRFPPPWTVEKIAGGFKVCDANGQSLAYVYSSENPNDAF
Ga0306918_103562413	3300031744	Soil	MAARRFPPPWTVEQIPGGYKVIDANGRSLAYVYGRETKADADIA
Ga0310904_105788691	3300031854	Soil	MTQRRFPPPWRVEEITAGYVVKNANGQSLAYVYGRETRADA
Ga0306925_113321002	3300031890	Soil	MARRFPPPWTVEQIPGGYKVLDANGQSLAYVYGRETAILE
Ga0306923_103649471	3300031910	Soil	PWSVEQIPGGYKVLDADGQSLAYVYGCETKADADIAKY
Ga0306923_108800852	3300031910	Soil	MRRFPAPWTVERIAGGFKVLDANRQSLAHVYSRETKDANK
Ga0306921_102984721	3300031912	Soil	VRRFPPPWTVEQIPGGYKVLDKNGQSLAYVYGRETRA
Ga0306921_114392801	3300031912	Soil	MRRFPPPWTVERIARVIDANGQSLAYVYSRETIDANKC
Ga0310916_112200331	3300031942	Soil	LTLKAAGRRFPAPWTVEKIAGGFKVLDANGQALGYVYSRETK
Ga0310910_108488551	3300031946	Soil	MTRRFLAPWTVQQIPNGFKVLDANGQSLAYVYGRETKADADI
Ga0315294_112016091	3300031952	Sediment	VRRFPSPWTAERIPGGYVVKDATGQSLVYVYARETRAEADTAKVLTMDEA
Ga0306926_124888671	3300031954	Soil	MARRFPPPWTVEQIPGGYKVLDATGQSLAYVYGRETRADA
Ga0310890_108061843	3300032075	Soil	MRRFPAPWTVEKIPGGFKVIDANGQSLAYVYGRETKADADI
Ga0306924_119376511	3300032076	Soil	MRRFPPPWSVEQIPGGYKVLDADGQSLAYVYGCETKADADIAKY
Ga0306920_1016046131	3300032261	Soil	MRRFPPWTVEQIPGGYKVLDANGQSLAYVYGRETKADADI

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042544

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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