NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F042587

Metagenome / Metatranscriptome Family F042587

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F042587
Family Type Metagenome / Metatranscriptome
Number of Sequences 158
Average Sequence Length 91 residues
Representative Sequence VVRKEPTVYRRTLARAIEIAGGVEPLARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWIPAPDSR
Number of Associated Samples 130
Number of Associated Scaffolds 158

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 34.81 %
% of genes near scaffold ends (potentially truncated) 43.04 %
% of genes from short scaffolds (< 2000 bps) 82.91 %
Associated GOLD sequencing projects 125
AlphaFold2 3D model prediction Yes
3D model pTM-score0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (85.443 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(8.861 % of family members)
Environment Ontology (ENVO) Unclassified
(31.013 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(37.342 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 53.85%    β-sheet: 0.00%    Coil/Unstructured: 46.15%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.64
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 158 Family Scaffolds
PF00793DAHP_synth_1 27.85
PF10503Esterase_PHB 24.05
PF00296Bac_luciferase 5.70
PF09411PagL 3.80
PF00027cNMP_binding 2.53
PF13365Trypsin_2 2.53
PF03401TctC 1.27
PF13458Peripla_BP_6 1.27
PF07311Dodecin 1.27
PF13545HTH_Crp_2 0.63
PF00486Trans_reg_C 0.63
PF13549ATP-grasp_5 0.63
PF10975DUF2802 0.63
PF04909Amidohydro_2 0.63
PF02321OEP 0.63
PF00691OmpA 0.63

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 158 Family Scaffolds
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 5.70
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 1.27
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 1.27
COG3360Flavin-binding protein dodecinGeneral function prediction only [R] 1.27

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms85.44 %
UnclassifiedrootN/A14.56 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_100688728All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3410Open in IMG/M
3300000953|JGI11615J12901_10544906All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria934Open in IMG/M
3300002568|C688J35102_120452038All Organisms → cellular organisms → Bacteria → Proteobacteria1080Open in IMG/M
3300002568|C688J35102_120921405Not Available2361Open in IMG/M
3300003319|soilL2_10073937All Organisms → cellular organisms → Bacteria → Proteobacteria3443Open in IMG/M
3300004009|Ga0055437_10106130All Organisms → cellular organisms → Bacteria → Proteobacteria833Open in IMG/M
3300004114|Ga0062593_103204559All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria524Open in IMG/M
3300004156|Ga0062589_100356435All Organisms → cellular organisms → Bacteria → Proteobacteria1164Open in IMG/M
3300004156|Ga0062589_100527595All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1003Open in IMG/M
3300004156|Ga0062589_100827883Not Available842Open in IMG/M
3300004156|Ga0062589_101450196All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria672Open in IMG/M
3300004156|Ga0062589_102593835Not Available526Open in IMG/M
3300004157|Ga0062590_100295050Not Available1257Open in IMG/M
3300004463|Ga0063356_100494617All Organisms → cellular organisms → Bacteria → Proteobacteria1614Open in IMG/M
3300004479|Ga0062595_100494334Not Available916Open in IMG/M
3300004479|Ga0062595_100703653All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria812Open in IMG/M
3300004808|Ga0062381_10054256All Organisms → cellular organisms → Bacteria → Proteobacteria1147Open in IMG/M
3300005294|Ga0065705_10293910All Organisms → cellular organisms → Bacteria → Proteobacteria1069Open in IMG/M
3300005294|Ga0065705_10409144Not Available866Open in IMG/M
3300005295|Ga0065707_10013323All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2000Open in IMG/M
3300005332|Ga0066388_100191712All Organisms → cellular organisms → Bacteria2660Open in IMG/M
3300005332|Ga0066388_100924907All Organisms → cellular organisms → Bacteria → Proteobacteria1447Open in IMG/M
3300005332|Ga0066388_103350081All Organisms → cellular organisms → Bacteria → Proteobacteria819Open in IMG/M
3300005354|Ga0070675_101823732All Organisms → cellular organisms → Bacteria → Proteobacteria561Open in IMG/M
3300005356|Ga0070674_101941038All Organisms → cellular organisms → Bacteria → Proteobacteria535Open in IMG/M
3300005406|Ga0070703_10036699All Organisms → cellular organisms → Bacteria → Proteobacteria1507Open in IMG/M
3300005444|Ga0070694_100568068Not Available910Open in IMG/M
3300005445|Ga0070708_101495235All Organisms → cellular organisms → Bacteria → Proteobacteria629Open in IMG/M
3300005518|Ga0070699_101093381All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria731Open in IMG/M
3300005526|Ga0073909_10029380All Organisms → cellular organisms → Bacteria → Proteobacteria1867Open in IMG/M
3300005530|Ga0070679_101759190All Organisms → cellular organisms → Bacteria → Proteobacteria568Open in IMG/M
3300005530|Ga0070679_102184149All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria503Open in IMG/M
3300005563|Ga0068855_100145399All Organisms → cellular organisms → Bacteria2699Open in IMG/M
3300005564|Ga0070664_101045646All Organisms → cellular organisms → Bacteria → Proteobacteria768Open in IMG/M
3300005713|Ga0066905_100011350All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria4260Open in IMG/M
3300005713|Ga0066905_100201352All Organisms → cellular organisms → Bacteria → Proteobacteria1489Open in IMG/M
3300005841|Ga0068863_100136017All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2348Open in IMG/M
3300006049|Ga0075417_10306096All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli772Open in IMG/M
3300006163|Ga0070715_10835940All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria562Open in IMG/M
3300006358|Ga0068871_101448015All Organisms → cellular organisms → Bacteria → Proteobacteria648Open in IMG/M
3300006577|Ga0074050_11783808All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium687Open in IMG/M
3300006604|Ga0074060_11722626All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium614Open in IMG/M
3300006845|Ga0075421_101305582All Organisms → cellular organisms → Bacteria → Proteobacteria803Open in IMG/M
3300006847|Ga0075431_102109294All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli518Open in IMG/M
3300006852|Ga0075433_11880744All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria514Open in IMG/M
3300006854|Ga0075425_101054033All Organisms → cellular organisms → Bacteria → Proteobacteria927Open in IMG/M
3300006894|Ga0079215_10434721All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria790Open in IMG/M
3300006894|Ga0079215_10561103All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria732Open in IMG/M
3300006918|Ga0079216_10061471All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1674Open in IMG/M
3300006953|Ga0074063_14170962All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium546Open in IMG/M
3300007004|Ga0079218_11950845Not Available667Open in IMG/M
3300007790|Ga0105679_10121114All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1147Open in IMG/M
3300009012|Ga0066710_104703994All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria510Open in IMG/M
3300009094|Ga0111539_10010936All Organisms → cellular organisms → Bacteria → Proteobacteria11423Open in IMG/M
3300009094|Ga0111539_10404661All Organisms → cellular organisms → Bacteria → Proteobacteria1590Open in IMG/M
3300009094|Ga0111539_11759688Not Available719Open in IMG/M
3300009094|Ga0111539_12608015All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium586Open in IMG/M
3300009156|Ga0111538_10115508All Organisms → cellular organisms → Bacteria → Proteobacteria3410Open in IMG/M
3300009156|Ga0111538_10315998All Organisms → cellular organisms → Bacteria → Proteobacteria1977Open in IMG/M
3300009176|Ga0105242_12925434All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria528Open in IMG/M
3300009609|Ga0105347_1340849All Organisms → cellular organisms → Bacteria → Proteobacteria637Open in IMG/M
3300009610|Ga0105340_1031576Not Available2058Open in IMG/M
3300009678|Ga0105252_10047327All Organisms → cellular organisms → Bacteria → Proteobacteria1620Open in IMG/M
3300010038|Ga0126315_11040743All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria550Open in IMG/M
3300010362|Ga0126377_11850398All Organisms → cellular organisms → Bacteria → Proteobacteria679Open in IMG/M
3300010397|Ga0134124_10008196All Organisms → cellular organisms → Bacteria → Proteobacteria8433Open in IMG/M
3300010399|Ga0134127_13220778All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria533Open in IMG/M
3300010400|Ga0134122_10062558All Organisms → cellular organisms → Bacteria → Proteobacteria2876Open in IMG/M
3300010400|Ga0134122_12242797All Organisms → cellular organisms → Bacteria → Proteobacteria590Open in IMG/M
3300010400|Ga0134122_12582039All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria558Open in IMG/M
3300011107|Ga0151490_1304912All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1695Open in IMG/M
3300011420|Ga0137314_1162871All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria542Open in IMG/M
3300011434|Ga0137464_1027919All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1527Open in IMG/M
3300011439|Ga0137432_1008411Not Available2870Open in IMG/M
3300011442|Ga0137437_1083613All Organisms → cellular organisms → Bacteria1091Open in IMG/M
3300011445|Ga0137427_10087953All Organisms → cellular organisms → Bacteria → Proteobacteria1248Open in IMG/M
3300012167|Ga0137319_1021376All Organisms → cellular organisms → Bacteria → Proteobacteria1308Open in IMG/M
3300012212|Ga0150985_100036918All Organisms → cellular organisms → Bacteria → Proteobacteria1415Open in IMG/M
3300012212|Ga0150985_112772865All Organisms → cellular organisms → Bacteria → Proteobacteria891Open in IMG/M
3300012469|Ga0150984_106987092All Organisms → cellular organisms → Bacteria → Proteobacteria813Open in IMG/M
3300012469|Ga0150984_112919379All Organisms → cellular organisms → Bacteria → Proteobacteria1103Open in IMG/M
3300012478|Ga0157328_1018507All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria566Open in IMG/M
3300012514|Ga0157330_1047738All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria597Open in IMG/M
3300012685|Ga0137397_10207096All Organisms → cellular organisms → Bacteria1459Open in IMG/M
3300012922|Ga0137394_10007797All Organisms → cellular organisms → Bacteria8287Open in IMG/M
3300012948|Ga0126375_10618505All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria830Open in IMG/M
3300012960|Ga0164301_11350104Not Available580Open in IMG/M
3300012971|Ga0126369_11418421All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium784Open in IMG/M
3300012987|Ga0164307_10448910All Organisms → cellular organisms → Bacteria962Open in IMG/M
3300013306|Ga0163162_12943397All Organisms → cellular organisms → Bacteria → Proteobacteria548Open in IMG/M
3300014872|Ga0180087_1080715All Organisms → cellular organisms → Bacteria → Proteobacteria625Open in IMG/M
3300015371|Ga0132258_10053781All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria9230Open in IMG/M
3300017792|Ga0163161_10868685All Organisms → cellular organisms → Bacteria → Proteobacteria762Open in IMG/M
3300018083|Ga0184628_10119436All Organisms → cellular organisms → Bacteria1363Open in IMG/M
3300018422|Ga0190265_11672751All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria747Open in IMG/M
3300019263|Ga0184647_1425981All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium621Open in IMG/M
3300019279|Ga0184642_1507878Not Available1819Open in IMG/M
3300019377|Ga0190264_11168777All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria635Open in IMG/M
3300020154|Ga0196965_1169203All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria565Open in IMG/M
3300020202|Ga0196964_10139067All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1094Open in IMG/M
3300020215|Ga0196963_10057627Not Available1619Open in IMG/M
3300021082|Ga0210380_10205215All Organisms → cellular organisms → Bacteria891Open in IMG/M
3300022195|Ga0222625_1739695All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1449Open in IMG/M
3300024177|Ga0247686_1002286All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2049Open in IMG/M
3300024182|Ga0247669_1012776All Organisms → cellular organisms → Bacteria → Proteobacteria1509Open in IMG/M
3300024224|Ga0247673_1058296Not Available558Open in IMG/M
3300024275|Ga0247674_1002435All Organisms → cellular organisms → Bacteria2012Open in IMG/M
3300024317|Ga0247660_1055051All Organisms → cellular organisms → Bacteria → Proteobacteria660Open in IMG/M
3300024325|Ga0247678_1053739All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria653Open in IMG/M
3300025311|Ga0209343_10346176All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1003Open in IMG/M
3300025885|Ga0207653_10076324All Organisms → cellular organisms → Bacteria → Proteobacteria1153Open in IMG/M
3300025901|Ga0207688_10384222All Organisms → cellular organisms → Bacteria869Open in IMG/M
3300025923|Ga0207681_10291886All Organisms → cellular organisms → Bacteria1287Open in IMG/M
3300025924|Ga0207694_10557734All Organisms → cellular organisms → Bacteria → Proteobacteria962Open in IMG/M
3300025939|Ga0207665_10645816All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300026023|Ga0207677_12087319All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria527Open in IMG/M
3300026041|Ga0207639_10958874All Organisms → cellular organisms → Bacteria800Open in IMG/M
3300026095|Ga0207676_10021515Not Available4732Open in IMG/M
3300026121|Ga0207683_11520239All Organisms → cellular organisms → Bacteria → Proteobacteria618Open in IMG/M
3300026378|Ga0247712_1001372All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2226Open in IMG/M
3300027821|Ga0209811_10016465All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2394Open in IMG/M
3300027873|Ga0209814_10043827All Organisms → cellular organisms → Bacteria → Proteobacteria1864Open in IMG/M
3300027880|Ga0209481_10020715All Organisms → cellular organisms → Bacteria → Proteobacteria2907Open in IMG/M
3300027886|Ga0209486_10814228All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria612Open in IMG/M
3300027886|Ga0209486_10984906All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria565Open in IMG/M
3300027907|Ga0207428_10354111All Organisms → cellular organisms → Bacteria → Proteobacteria1080Open in IMG/M
3300028040|Ga0247704_1029842Not Available821Open in IMG/M
3300028041|Ga0247719_1161931Not Available522Open in IMG/M
3300028792|Ga0307504_10262662All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria636Open in IMG/M
3300028812|Ga0247825_10059815All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2539Open in IMG/M
3300028812|Ga0247825_10121853Not Available1776Open in IMG/M
3300028812|Ga0247825_11315386Not Available529Open in IMG/M
3300031184|Ga0307499_10002048All Organisms → cellular organisms → Bacteria → Proteobacteria5280Open in IMG/M
3300031199|Ga0307495_10012710All Organisms → cellular organisms → Bacteria → Proteobacteria1276Open in IMG/M
3300031226|Ga0307497_10182366Not Available896Open in IMG/M
3300031481|Ga0314816_1008532All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1183Open in IMG/M
3300031538|Ga0310888_10176442Not Available1159Open in IMG/M
3300031547|Ga0310887_10196984Not Available1092Open in IMG/M
3300031548|Ga0307408_100486530All Organisms → cellular organisms → Bacteria1078Open in IMG/M
3300031720|Ga0307469_11515750All Organisms → cellular organisms → Bacteria → Proteobacteria642Open in IMG/M
3300031731|Ga0307405_10210653All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1419Open in IMG/M
3300031740|Ga0307468_100020875All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2889Open in IMG/M
3300031740|Ga0307468_100331217All Organisms → cellular organisms → Bacteria → Proteobacteria1124Open in IMG/M
3300031740|Ga0307468_100985935All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria740Open in IMG/M
3300031740|Ga0307468_101381642All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria646Open in IMG/M
3300031820|Ga0307473_10010894All Organisms → cellular organisms → Bacteria3300Open in IMG/M
3300031847|Ga0310907_10438711All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria688Open in IMG/M
3300031858|Ga0310892_10437122All Organisms → cellular organisms → Bacteria860Open in IMG/M
3300031908|Ga0310900_10500456All Organisms → cellular organisms → Bacteria944Open in IMG/M
3300032075|Ga0310890_10048096All Organisms → cellular organisms → Bacteria2423Open in IMG/M
3300032075|Ga0310890_11254375All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium605Open in IMG/M
3300033407|Ga0214472_10233812All Organisms → cellular organisms → Bacteria → Proteobacteria1767Open in IMG/M
3300033550|Ga0247829_10748406All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria814Open in IMG/M
3300034148|Ga0364927_0168220All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria636Open in IMG/M
3300034354|Ga0364943_0105652All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria986Open in IMG/M
3300034417|Ga0364941_192066All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium527Open in IMG/M
3300034817|Ga0373948_0016173All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1376Open in IMG/M
3300034817|Ga0373948_0131865All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria612Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere8.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.59%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil6.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil6.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.70%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.43%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.80%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.80%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.16%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.16%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.53%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.53%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil2.53%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.90%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.90%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.90%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.27%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.27%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.27%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.27%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.27%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.27%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.27%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.27%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.27%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil1.27%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.27%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.27%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment0.63%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater0.63%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.63%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.63%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.63%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.63%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.63%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.63%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.63%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.63%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.63%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.63%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.63%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.63%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.63%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.63%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000953Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300004009Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004808Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1FreshEnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006577Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006604Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007790Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projectsEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009609Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890EnvironmentalOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300009678Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011107Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300011420Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2EnvironmentalOpen in IMG/M
3300011434Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2EnvironmentalOpen in IMG/M
3300011439Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2EnvironmentalOpen in IMG/M
3300011442Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2EnvironmentalOpen in IMG/M
3300011445Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2EnvironmentalOpen in IMG/M
3300012167Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT333_2EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012478Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.9.old.080610Host-AssociatedOpen in IMG/M
3300012514Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510EnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014872Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT790_16_10DEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300019263Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019279Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300020154Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_20EnvironmentalOpen in IMG/M
3300020202Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10EnvironmentalOpen in IMG/M
3300020215Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5EnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300022195Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024177Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK27EnvironmentalOpen in IMG/M
3300024182Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10EnvironmentalOpen in IMG/M
3300024224Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14EnvironmentalOpen in IMG/M
3300024275Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK15EnvironmentalOpen in IMG/M
3300024317Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01EnvironmentalOpen in IMG/M
3300024325Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19EnvironmentalOpen in IMG/M
3300025311Groundwater microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_0.2 (SPAdes)EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026378Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 4-4-E_DEnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028040Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 4-1-W_NEnvironmentalOpen in IMG/M
3300028041Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 4-1-E_DEnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031481Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - MICR_N_R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300034148Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17EnvironmentalOpen in IMG/M
3300034354Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17EnvironmentalOpen in IMG/M
3300034417Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17EnvironmentalOpen in IMG/M
3300034817Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10068872873300000364SoilVVRKEPTVYRRTLARAIEIAGGVEPLARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWVPARDSR*
JGI11615J12901_1054490623300000953SoilRAVQHETIGTPVGRQAPNVYRRTLARAIEIAGGEEPLARFLACTPAEIAKWTTGESNPPMPFFLAMVDITAANALTAMALENLPAARARRSTWIPAPDSR*
C688J35102_12045203823300002568SoilVQHETIRTLVVRKEPTVYRRALARAIEIAGGVEPLARFLACTPSEIAKWTSGESAPPMPFFLAMVDIAAANALTATALENLPAARVRRSTWIRTPDSR*
C688J35102_12092140513300002568SoilVQHETIRTLVVRKEPTVYRRTLARAIEIAGGVEPLARFLACTPSEIAKWTTGESNPPMPFFLAMVDIAAANALTATALENLPAARARRSTWIPAPDSR*
soilL2_1007393743300003319Sugarcane Root And Bulk SoilVIRNEPTVYRRTLARAIEIAGSVDTLASFLACTPGEIGKWLSGESNPPMPFFLAMVDIAAANALTAAALENLPAARARRSSGIPARNAG*
Ga0055437_1010613013300004009Natural And Restored WetlandsTLARAIEIAGGPENLARFLACTPGELAKWSTGESNPPMPFFLAMVDITAANALAPEALQNLPAARARRSTWIAAPDTR*
Ga0062593_10320455913300004114SoilAIEIAGSQENLARFLACTPNEIAKWASGESNPPMPIFLAMVDITAANALTPVALENLPAARARRSTWIAAQNSR*
Ga0062589_10035643523300004156SoilAAATRPSSAPGLERGGPGQRETIATVVTRKETTVYRRTLARAIEIAGGEENLARFLACTPAEIKKWTTGESNPPMPIFLAMVDIAAANALTPEALENLPAARARRSTWIPAPNTR*
Ga0062589_10052759523300004156SoilVRQWGPYVTRKEPNVYRRTLARAIEIAGSPENLARFLACTPNEIAKWASGESNPPMPIFLAMVDITAANALTPVALENLPAARARRSTWIAAQNSR*
Ga0062589_10082788323300004156SoilVVRKEPTVYRRTLARAIEIAGGVEPLALFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWIPARDSR*
Ga0062589_10145019623300004156SoilVTRNEPNVYRRTLARAVEIAGGQENLARFLACTPSEIVKWASGESNPPMPIFLAMVDIAAANALTPAALENLPAARARRSAWIPAQNNR*
Ga0062589_10259383513300004156SoilVQHATIRTPVVRNEPNVYRRTLARAIEIAGGEEALARFLACTPSEIAKWTSGESAPPMPFFLAMVDIAAANALTATALENLPAARARRSTWIPAP
Ga0062590_10029505023300004157SoilVQHATIRTPVVRNEPNVYRRTLARAIEIAGGEEALARFLACTPSEIAKWTSGESAPPMPFFLAMVDIAAANALTATALENLPAARARRSTWIPAPHSR*
Ga0063356_10049461723300004463Arabidopsis Thaliana RhizosphereVTRKETTVYRRTLARAIEIAGGEENLARFLACTPAEIKKWTTGESNPPMPIFLAMVDIAAANALTPEALENLPAARARRSTWIPAPNTR*
Ga0062595_10049433413300004479SoilMAVQHATIRTPVVRNEPNVYRRTLARAIEIAGGEEALARFLACTPSEIAKWTSGESAPPMPFFLAMVDIAAANALTATALENLPAARARRSTWIPAPHSR*
Ga0062595_10070365313300004479SoilVQHETIGTPVGRQAPNVYRRTLARAIEIAGGEEPLARFLACTPAEIAKWTTGESNPPMPFFLAMVDITAANALTAMALENLPAARARRSTWIPAPDSR*
Ga0062381_1005425623300004808Wetland SedimentMRECTPVMRKEPTVYRRTLARAIEIAGGQEHLARFLACTPAEIGKWASGESNPPMPIFLAMVDIVAANALTPEALENLPAARARRSTWIPAQNSR*
Ga0065705_1029391023300005294Switchgrass RhizosphereVVRKEPTVYRRTLARAIEIAGGVEPLARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWIPAPDSR*
Ga0065705_1040914413300005294Switchgrass RhizosphereVRKEPTVYRRTLARAIEIAGGVEALARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWVPVRDSR*
Ga0065707_1001332333300005295Switchgrass RhizosphereVRKEPTVYRRTLARAIEIAGGVEALARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWVPARDSR*
Ga0066388_10019171273300005332Tropical Forest SoilVQHETIGTPVVRKEPTVYRRTLARAIEIAGGVEPLARFLACTPSEIAKWTSGEFNPPMPFFLAMVDIAAANALTATALENLPAARARRSTWIPAPDSR*
Ga0066388_10092490723300005332Tropical Forest SoilVTRKEPTVYLRTLARAIEIAGGPETLASFLACTPGEIAKWSSGETNPPMPFFLAMVDITAANALTPEALQNLPAARARRSTWIPAPDRR*
Ga0066388_10335008123300005332Tropical Forest SoilRKEPTVYRRTLARAIEIAGGVEPLARFLACTPAEIVKWTTGESNPPMPFFLAMVDIAAANALTATALENLPAARARRSTWIPAPDSR*
Ga0070675_10182373213300005354Miscanthus RhizosphereRAIEIAGGVEPLALFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWIPARDSR*
Ga0070674_10194103823300005356Miscanthus RhizosphereIEIAGGVEPLALFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWIPARDSR*
Ga0070703_1003669923300005406Corn, Switchgrass And Miscanthus RhizosphereVVRKEHTVYRRTLARAIEIAGGVEPLALFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWIPARDSR*
Ga0070694_10056806823300005444Corn, Switchgrass And Miscanthus RhizosphereVRQWGPDVTRKEPNVYRRTLARAIEIAGSQENLARFLACTPNEIAKWASGESNPPMPIFLAMVDITAANALTPVALENLPAARARRSTWIAAQNSR*
Ga0070708_10149523523300005445Corn, Switchgrass And Miscanthus RhizosphereLVVRKEPTVYRRTLARAIEIAGGVEPLALFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWIPARDSR*
Ga0070699_10109338123300005518Corn, Switchgrass And Miscanthus RhizosphereVVRKEPTVYRRTLARAIEIAGGVEPLALFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWMPARDSR*
Ga0073909_1002938023300005526Surface SoilMAVQHATIGTLVVRNEPNVYRRTLARAIEIAGGEEVLARFLACTPSEIAKWTSGESAPPMPIFLAMVDIAAANALTATALENLPAARARRSTWIPAPDSR*
Ga0070679_10175919023300005530Corn RhizosphereAIEIAGGEEPLARFLACTPAEIAKWTTGESNPPMPFFLAMVDITAANALTAMALENLPAARARRSTWIPAPDSR*
Ga0070679_10218414913300005530Corn RhizosphereVRQRGPYVTRKEPNVYRRTLARAIEIAGSPENLARFLACTPNEIAKWASGESNPPMPIFLAMVDIAAANALTPAALENLPAARARRSTWIPAQNSR*
Ga0068855_10014539933300005563Corn RhizosphereVQHETIRTLVVRKEPTVYRRTLARAIEIAGGVEPLALFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWIPARDSR*
Ga0070664_10104564623300005564Corn RhizosphereVQHETIRTLVVRKEPTVYRRTLARAIEIAGGVEPLALFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAAR
Ga0066905_10001135033300005713Tropical Forest SoilMTRKEPTVYRRTLARATEIAGGPENLARFLACTPAEIAKWSTGETNPPMPFFLAMVDIAAANALTPEALENLPAARARRSTWITAPHTR*
Ga0066905_10020135223300005713Tropical Forest SoilVRQSARTVTRKEPTVYLRTLARAIEIAGGPETLASFLACTPGEIAKWSSGETNPPMPFFLAMVDITAANALTPEALQNLPAARARRSTWMPAPDRR*
Ga0068863_10013601733300005841Switchgrass RhizosphereVQHETIRTLVVRKEPTVYRRTLARAIEIAGGVEPLALFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWVPVRDSR*
Ga0075417_1030609613300006049Populus RhizosphereVQHATIGTPVVRKEPTVYRRTLARAIEIAGGVEPLARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWVPARDSR*
Ga0070715_1083594013300006163Corn, Switchgrass And Miscanthus RhizosphereTTHFRCACRRGVGLEHLMAVQHETISTLVVRKEPTVYRRTLARAIEIAGGVEPLARFLACTPGEIAKWTTGESNPPMPFFLAMVDVAAANALTATALENLPAARARRSTWIPAPDSR*
Ga0068871_10144801513300006358Miscanthus RhizosphereRRAVQHETIGTPVGRQAPNVYRRTLARAIEIAGGEEPLARFLACTPAEIAKWTTGESNPPMLFFLAMVDITAANALTAMALENLPAARARRSTWIPAPDSR*
Ga0074050_1178380813300006577SoilVQHATIGTPVVRNEPNVYRRTLARAIEIAGGEEALARFLACTPSEIAKWTSGESAPPMPFFLAMVDIAAANALTATALENLPAARARRSTWIPAPDSR*
Ga0074060_1172262613300006604SoilERRVAVQHATIGTPVVRNEPNVYRRTLARAIEIAGGEEALARFLACTPSEIAKWTSGESAPPMPFFLAMVDIAAANALTATALENLPAARARRSTWIPAPDSR*
Ga0075421_10130558213300006845Populus RhizospherePNVYRRTLARAIEIAGGQENLARFLACTPAEIGKWSSGESNPPMPIFLAMVDITAANALTPEALENLPAARARRSTWIPAPNSR*
Ga0075431_10210929413300006847Populus RhizosphereVRKEPTVYRRTLARAIEIAGGVEPLARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWVPARDSR*
Ga0075433_1188074423300006852Populus RhizosphereVQHETIRTLVVRKEPTVYRRTLARAIEIAGGVEPLARFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWIPAPNSR*
Ga0075425_10105403323300006854Populus RhizosphereAETAVQHETIGTLVVRKEPTVYRRTLARAIEIAGGVEPLARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWVPVRDSR*
Ga0079215_1043472123300006894Agricultural SoilMRNEPTVYRRTLARAVEIAGGEDNLARFLACTPNEIAKWSSGESNPPMPIFLAMVDIAAANALTPDALQNLPAARARRSVWIPAQNSR*
Ga0079215_1056110313300006894Agricultural SoilVTRKEPTVYRRTLARAIEIAGGEENLARFLACTPSEIAKWPTGESNPPMPIFLAMVDIAAANALTSEALENLPAARARRSTWIPAQNNR*
Ga0079216_1006147133300006918Agricultural SoilMRNEPTVYRRTLARAIEIAGGEDNLARFLACTPNEIAKWSSGESNPPMPIFLAMVDIAAANALTPDALQNLPAARARRSVWIPAQNSR*
Ga0074063_1417096223300006953SoilEPNVYRRTLARAIEIAGGEEPLARFLACTTSEIAKWTSGDSAPPMPFFLAMVDIAAANALTATALENLPAARARRSTWIPAPNSR*
Ga0079218_1195084523300007004Agricultural SoilMIAVGKARGMHAKIRIAVTRKEPTVYRRTLARAIEIAGGEENLARFLACTPSEIAKWSTGESNPPMPIFLAMVDIAAANALTSEALENLPAARARRSTWIPAQNNR*
Ga0105679_1012111413300007790SoilVTRKEPTVYRRTLARAIEIAGGEESLACFLACTPTEIARWGSGETNPPMPIFLAMVDITAANALTPAALENLPAARARRSVWLPAQGRG*
Ga0066710_10470399423300009012Grasslands SoilVKRTEPNVYRRTLARAIEIAGDQESLARFLACTPKEIAKWASGESNPPMPIFLAMVDVVAANALTPTALENLPAARARRSTWIPAQNSR
Ga0111539_10010936113300009094Populus RhizosphereVGRQAPNVYRRTLARAIEIAGGEEPLARFLACTPAEIAKWTTGESNPPMPFFLAMVDITAANALTAMALENLPAARARRSTWIPAPDSR*
Ga0111539_1040466123300009094Populus RhizosphereVQHETIGTLVVRKEPTVYRRTLARAIEIAGGVEPLARFLACTPSEIARWNSGDFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWVPARDSR*
Ga0111539_1175968813300009094Populus RhizosphereVVRKEPTVYRRTLARAIEIAGGVEPLARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARA
Ga0111539_1260801513300009094Populus RhizosphereAVQHETIGTLVVRKEPTVYRRTLARAIEIAGGVEPLARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWVPVRDSR*
Ga0111538_1011550813300009156Populus RhizosphereAAVQHATIGTPVVRKEPTVYRRTLARAIEIAGGVEPLARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWVPARDSR*
Ga0111538_1031599833300009156Populus RhizosphereVVRKEPTVYRRTLARAIEIAGGVEPLARFLACTPSEIARWNSGDFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWVPARDSR*
Ga0105242_1292543423300009176Miscanthus RhizosphereMAVQHATIRTPVVRNEPNVYRRTLARAIEIAGGEEPLARFLACTPAEIAKWTTGESNPPMPFFLAMVDITAANALTAMALENLPAARARRSTWIPAPDSR*
Ga0105347_134084923300009609SoilRRTLARAIEIAGGRENLARFLACTPAEIGKWASGESNPPMPIFLAMVDITAANALTPEALENLPAARARRSTWIPAPNTR*
Ga0105340_103157623300009610SoilMRQSARTVTRKEPTVYRRTLARAIEIAGGPENLGRFLACTPGEIAKWSSGESNPPMPFFLAMVDITAANALTPEALQNLPAARARGSTWMPAPDTR*
Ga0105252_1004732743300009678SoilDVTRKEPTVYRRTLARAIEIAGGRENLARFLACTPAEIGKWASGESNPPMPIFLAMVDITAANALTPEALENLPAARARRSTWIPAPNTR*
Ga0126315_1104074313300010038Serpentine SoilLATKHYWHDMKRTQSTVYTRTLARAIEVAGGQENLARFLGSTPAELRKWASGDTNPPMPIFLAMVDVVAANALTPTALGNLPAARARRSTF*
Ga0126377_1185039813300010362Tropical Forest SoilLARAIEIAGGPETLASFLACTPGEIAKWSSGETNPPMPFFLAMVDITAANALTPEALQNLPAARARRSTWMPAPDRR*
Ga0134124_10008196133300010397Terrestrial SoilVQHETIGTLVVRKEPTVYRRTLARAIEIAGGVEPLARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWVPVRDSR*
Ga0134127_1322077823300010399Terrestrial SoilVTRKEPNVYRRTLARAIEIAGSQENLARFLACTPNEIAKWASGESNPPMPIFLAMVDITAANALTPVALENLPAARARRSTWIAAQNSR*
Ga0134122_1006255843300010400Terrestrial SoilIEIAGGEEALARFLACTPSEIAKWTSGDSAPPMPFFLAMVDIAAANALTATALENLPAARARRSTWIPAPNSR*
Ga0134122_1224279713300010400Terrestrial SoilNVYRRTLARAIEIAGGEEPLARFLACTPAEIAKWTTGESNPPMPFFLAMVDITAANALTAMALENLPAARARRSTWIPAPDSR*
Ga0134122_1258203923300010400Terrestrial SoilVVRKEPTVYRRTLARAIEIAGGVEPLARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWVPVRDSR*
Ga0151490_130491223300011107SoilVAVQHATIGTPVVRNEPNVYRRTLARAIEIAGGEEALARFLACTPSEIAKWTSGESAPPMPFFLAMVDIAAANALTATALENLPAARARRSTWIPAPDSR*
Ga0137314_116287123300011420SoilVTRKEPTVYRRTLARAIEIAGGRENLARFLACTPAEIGKWASGESNPPMPIFLAMVDITAANALTPEALENLPAARARR
Ga0137464_102791923300011434SoilMRQSARTVTRKEPTVYRRTLARAIEIAGGPENLGRFLACTPGEIAKWSSGESNPPMPFFLAMVDITAANALTPEALQNLPAARARRSTWMPAPDTR*
Ga0137432_100841133300011439SoilVTRKEPTVYRRTLARAIEIAGGRENLARFLACTPAEIGKWASGESNPPMPIFLAMVDIAAANALTPEALENLPAARARRSTWIPAPNTR*
Ga0137437_108361323300011442SoilMRQSAHPVVRNEPNVYRRTLARAIEIAGGEEALARFLACTLSEIAKWTSGESAPPMPIFLAMVDIAAANALTATALENLPAARARRSTWITAPDSR*
Ga0137427_1008795323300011445SoilVTRKEPTVYRRTLARAIEIAGGRENLARFLACTPAEIGKWASGESNPPMPIFLAMVDITAANALTPEALENLPAARARRSTWIPAPNTR*
Ga0137319_102137623300012167SoilLTLRNNAFFIGSARFPTGTVSPRTSGIVAVHRHRRARTGAPAQHETIATHVTRKEPTVYRRTLARAIEIAGGRENLARFLACTPAEIGKWASGESNPPMPIFLAMVDITAANALTPEALENLPAARARRSTWIPAPNTR*
Ga0150985_10003691813300012212Avena Fatua RhizosphereETIRTLVVRKEPTVYRRALARAIEIAGGVEPLARFLACTPSEIAKWTSGESAPPTPFFLAMVDIAAANALTATALENLPAARVRRSTWIRTPDSR*
Ga0150985_11277286513300012212Avena Fatua RhizosphereDVCSSDLYRRTLARAIEIAGGVEPLALFLASTPSEIARWTSGESAPPMPFFLAMVDIAAANALTATALENLPAARARRSTWIPAPDSR*
Ga0150984_10698709223300012469Avena Fatua RhizosphereQHETIRTLVVRKEPTVYRRALARAIEIAGGVEPLARFLACTPSEIAKWTSGESAPPMPFFLAMVDIAAANALTATALENLPAARVRRSTWIRTPDSR*
Ga0150984_11291937933300012469Avena Fatua RhizosphereVQHETIRTLVVRKEPTVYRRTLARAIEIAGGVEPLASFLACTPSEIAKWTTGESNPPMPFFLAMVDIAAANALTATALENLPAARARRSTWIPAPDSR*
Ga0157328_101850713300012478Arabidopsis RhizosphereVARAIEIAGGVEPLARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWIPAPDSR*
Ga0157330_104773813300012514SoilVQHETIGTLVVRKEPTVYRRTLARAIEIAGGVEPLARFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWVPARDSR*
Ga0137397_1020709623300012685Vadose Zone SoilVAVQHETIGTLVVRKEPTVYLRTLARAIEIAGGVEPLARFLACTPSEIAKWTTGESNPPMPFFLAMVDIAAANALTATALENLPAARARRSTWVPAPDSR*
Ga0137394_10007797123300012922Vadose Zone SoilVAVQHETIGTLVVRKEPTVYLRTLARAIEIAGGVEPLACFLACTPSEIAKWTTGESNPPMPFFLAMVDIAAANALTATALENLPAARARRSTWVPAPDSR*
Ga0126375_1061850523300012948Tropical Forest SoilVTRKEPTVYLRTLARAIEIAGGPETLASFLACTPGEIAKWSSGETNPPMPFFLAMVDITAANALTPEALQNLPAARARRSTWMPAPDRR*
Ga0164301_1135010423300012960SoilMAVQHATIRTPVVRNEPNVYRRTLARAIEIAGGEEALARFLACTPSEIAKWTSGDSAPPMPFFLAMVDIAAANALTATALENLPAARARRSTWIPAPNSR*
Ga0126369_1141842113300012971Tropical Forest SoilHETIATPVLRNEPTVYRRTLARAIEIAGGIEALARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWIPAQNSR*
Ga0164307_1044891013300012987SoilVVRKEPTVYRRTLARAIEIAGGVEPLALFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAAR
Ga0163162_1294339713300013306Switchgrass RhizosphereTPVGRQAPNVYRRTLARAIEIAGGEEPLARFLACTPAEIAKWTTGESNPPMPFFLAMVDITAANALTAMALENLPAARARRSTWIPAPDSR*
Ga0180087_108071523300014872SoilSGIVAVHRHRRARTGAPAQHETIATDVTRKEPTVYRRTLARAIEIAGGRENLARFLACTPAEIGKWASGESNPPMPIFLAMVDITAANALTPEALENLPAARARRSTWIPAPNTR*
Ga0132258_1005378113300015371Arabidopsis RhizospherePTVYRRTLARAIEIAGGVEPLARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWIPAPDSR*
Ga0163161_1086868523300017792Switchgrass RhizosphereTVYRRTLARAIEIAGGVEPLALFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWIPARDSR
Ga0184628_1011943623300018083Groundwater SedimentMRQSAHPVVRNEPNVYRRTLARAIEIAGGEEALARFLACTLSEIAKWTSGESAPPMPIFLAMVDIAAANALTATALENLPAARARRSTWIPAPDSR
Ga0190265_1167275123300018422SoilTRKAPNVYRRTLARAIEIAGSQENLARFLASTPAEIAKWTSGESNPPMPIFLAMVDVVAANALTPTALENLPAARARRSSLML
Ga0184647_142598113300019263Groundwater SedimentNVYRRTLARAIEIAGGEEALARFLACTLSEIAKWTSGESAPPMPIFLAMVDIAAANALTATALENLPAARARRSTWITAPDSR
Ga0184642_150787863300019279Groundwater SedimentVKRTEPTVYRRTLARAIEIAGDQESLARFLACTPKEIAKWASGESNPPMPIFLAMVDVVAANALTPTALENLPAARARRSTWIPAQNSR
Ga0190264_1116877713300019377SoilTRALARAVEVAGGADNLARFLGSTPTELGKWGSGETNPPMPIFLALVDVVAANALTPVALENLPVARARLSSATVGR
Ga0196965_116920333300020154SoilMARRENVYTRTLARAVQVAGSAEVLARFLGSTPAEIEKWATGETNPPMPIFLAMVDIVAANALTPVALSNLPAARVRRSSY
Ga0196964_1013906713300020202SoilSMRRTDSTVYTRTLARAAELAGGIEPLARFLGSTPHDLSRWATGESNPPMPIFLAMVDILAANALTPHALDNLPAARARRSTLGRVLTHQP
Ga0196963_1005762733300020215SoilMKRTDSTVYTRTLARAAELAGGIEPLARFLGSTPLELTRWASGETNPPMPIFLAMVDVLAANALTPQALDNLPAARARRSTLGRVLTHQP
Ga0210380_1020521513300021082Groundwater SedimentMRQSAHPVVRNEPNVYRRTLARAIEIAGGEEALARFLACTLSEIAKWTSGESAPPMPIFLAMVDIAAANALTATALENLPAARARRSTWITAPDSR
Ga0222625_173969553300022195Groundwater SedimentRAIEIAGDQESLARFLACTPKEIAKWASGESNPPMPIFLAMVDIVAANALTPTALENLPAARSRRSTWIPAQNSR
Ga0247686_100228613300024177SoilIRTLVVRKEPTVYRRTLARAIEIAGGVEPLALFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWIPARDSR
Ga0247669_101277623300024182SoilVQHETIGTPVGRQAPNVYRRTLARAIEIAGGEEPLARFLACTPAEIAKWTTGESNPPMPFFLAMVDITAANALTAMALENLPAARARRSTWIPAPDSR
Ga0247673_105829613300024224SoilVQHETIGTLVVRKEPTVYRRTLARAIEIAGGVEPLARFLACTPSEIARWTSGDFNPPMPFFLAMVDIAAANELTATALENLPAARARR
Ga0247674_100243523300024275SoilVGRQAPNVYRRTLARAIEIAGGEEPLARFLACTPAEIAKWTTGESNPPMPFFLAMVDITAANALTAMALENLPAARARRSTWIPAPDSR
Ga0247660_105505123300024317SoilQHETIGTPVGRQAPNVYRRTLARAIEIAGGEEPLARFLACTPAEIAKWTTGESNPPMPFFLAMVDITAANALTAMALENLPAARARRSTWIPAPDSR
Ga0247678_105373923300024325SoilPTVYRRTLARAIEIAGGVEPLARFLACTPGEIAKWTTGESNPPMPFFLAMVDVAAANALTATALENLPAARARRSTWIPAPDSR
Ga0209343_1034617623300025311GroundwaterMATPPLRRESTVYTRTLARAIEIAGSVEELAAFLASTPAEIGTWATGASNPPMPIFLALVDVVAANALTPTALENLPVARARRSSAAPRWEALSRSA
Ga0207653_1007632423300025885Corn, Switchgrass And Miscanthus RhizosphereVRKEPTVYRRTLARAIEIAGGVEPLALFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWIPARDSR
Ga0207688_1038422213300025901Corn, Switchgrass And Miscanthus RhizosphereVQHETIRTLVVRKEPTVYRRTLARAIEIAGGVEPLALFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWIPAR
Ga0207681_1029188623300025923Switchgrass RhizosphereVQHETIRTLVVRKEPTVYRRTLARAIEIAGGVEPLALFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARAHASSKDSTS
Ga0207694_1055773423300025924Corn RhizosphereVVRKEPTVYRRTLARAIEIAGGVEPLALFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWIPARDSR
Ga0207665_1064581623300025939Corn, Switchgrass And Miscanthus RhizosphereVQHETISTPVGRQAPNVYRRTLARAIEIAGGEEPLARFLACTPAEIAKWTTGESNPPMPFFLAMVDITAANALTAMALENLPA
Ga0207677_1208731923300026023Miscanthus RhizosphereIGTPVGRQAPNVYRRTLARAIEIAGGEEPLARFLACTPAEIAKWTTGESNPPMPFFLAMVDITAANALTAMALENLPAARARRSTWIPAPDSR
Ga0207639_1095887423300026041Corn RhizosphereVQHETIRTLVVRKEPTVYRRTLARAIEIAGGVEPLALFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRST
Ga0207676_1002151573300026095Switchgrass RhizosphereVQHETTGTPVGRQAPNVYRRTLARAIEIAGGEEPLARFLACTPAEIAKWTTGESNPPMPFFLAMVDITAANALTAMALENLPAARARRSTWIPAPDSR
Ga0207683_1152023923300026121Miscanthus RhizosphereLARAIEIAGGVEPLALFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWIPARDSR
Ga0247712_100137223300026378SoilMLEPKRKESVYTRSLARAIEIAGGVEPLADFLGCSAGDVRRWTSGESHAPMPIFLAMVDILAANALTPVALENLPAARARLSRGRPAGGRPA
Ga0209811_1001646533300027821Surface SoilMAVQHATIGTLVVRNEPNVYRRTLARAIEIAGGEEVLARFLACTPSEIAKWTSGESAPPMPIFLAMVDIAAANALTATALENLPAARARRSTWIPAPDSR
Ga0209814_1004382723300027873Populus RhizosphereVQHATIGTPVVRKEPTVYRRTLARAIEIAGGVEPLARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWVPARDSR
Ga0209481_1002071533300027880Populus RhizosphereVVRKEPTVYRRTLARAIEIAGGVEPLARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWVPARDSR
Ga0209486_1081422813300027886Agricultural SoilMRNEPTVYRRTLARAIEIAGGEDNLARFLACTPNEIAKWSSGESNPPMPIFLAMVDIAAANALTPDALQNLPAARARRSVWIPAQNSR
Ga0209486_1098490613300027886Agricultural SoilMRNEPTVYRRTLARAVEIAGGEDNLARFLACTPNEIAKWSSGESNPPMPIFLAMVDIAAANALTPDALQNLPA
Ga0207428_1035411123300027907Populus RhizosphereVQHETIGTLVVRKEPTVYRRTLARAIEIAGGVEPLARFLACTPSEIARWNSGDFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWVPARDSR
Ga0247704_102984223300028040SoilLEPKRKESVYTRSLARAIEIAGGVEPLADFLGCSAGDVRRWTSGESHAPMPIFLAMVDILAANALTPVALENLPAARARLSRGRPAGGRPA
Ga0247719_116193113300028041SoilPAPDVARAIEIAGGVEPLADFLGCSAGDVRRWTSGESHAPMPIFLAMVDILAANALTPVALENLPAARARLSRGRPAGGRPA
Ga0307504_1026266223300028792SoilVQHETIRTPVVRKEPTVYRRTLARAIEIAGGVEPLGRFLACTPSEIARWTTGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWIPARDSR
Ga0247825_1005981533300028812SoilVTRKEPTVYRRTLARAIEIAGGPENLARFLACTPGELAKWSTGESNPPMPFFLAMVDITAANALTPEALQNLPAARARRSTWIPAPDTR
Ga0247825_1012185323300028812SoilVTRKEPNVYRRTLARAVEIAEGPERLASFLACTPAEIAKWSTGESNPPMPIFLAMVDITAANALTPAALENLPAARARRSTWIPAQDSR
Ga0247825_1131538613300028812SoilVQHETIGTLVVRKEPTVYLRTLARAIEIAGGVEPLARFLACTPSEIAKWTSGEFAPPMPFFLAMVDIAAANALTATALENLPAARARRSTWIPAPDSR
Ga0307499_1000204813300031184SoilMAVQHATIRTPVVRNEPNVYRRTLARAIEIAGGEEPLARFLACTPSEIAKWTSGESAPPMPFFLAMVDIAAANALTATALENLPAARARRSTWIPAPDSR
Ga0307495_1001271023300031199SoilVGRKEPNVYRRTLARAIEIAGGEEPLARFLACTPSEIAKWTSGESAPPMPFFLAMVDIAAANALTATALENLPAARARRSTWIPAPDSR
Ga0307497_1018236613300031226SoilVARQAPNVYRRTLARAIEIAGGEEPLARFLACTPPEIAKWTTGESNPPMPFFLAMVDIAAANALTATALENLPAARARRSTWI
Ga0314816_100853223300031481SoilVNRKELTVYKRTLARAVEIAGNEETLARFLGSTRTEILKWTSGDTYPPMPIFLALVDIVVANALTPTALNNLPPARARRSAMYSQGGNAGQ
Ga0310888_1017644233300031538SoilVRKEPTVYRRTLARAIEIAGGVEALARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWVP
Ga0310887_1019698423300031547SoilVRKEPTVYRRTLARAIEIAGGVEALARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWVPARDSR
Ga0307408_10048653033300031548RhizosphereMARRENVYTRTLTRAVELAGSAEVLARFLGSTPAEISKWATGETNPPMPIFLAMVDIVAANALTPVALTNLPAARVRRSTY
Ga0307469_1151575013300031720Hardwood Forest SoilIEIAGGVEPLARFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWIPAPDSR
Ga0307405_1021065333300031731RhizosphereLATNPLKDMARRENVYTRTLTRAVELAGSAEVLARFLGSTPAEISKWATGETNPPMPIFLAMVDIVAANALTPVALTNLPAARVRRSTY
Ga0307468_10002087533300031740Hardwood Forest SoilRKEPTVYLRTLARAIEIAGGVEPLARFLACTPSEIAKWTSGEFAPPMPFFLAMVDIAAANALTATALENLPAARARRSTWIPAPDSR
Ga0307468_10033121723300031740Hardwood Forest SoilVQHETIRTLVVRKEPTVYRRTLARAIEIAGGVEPLARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWIPAPDSR
Ga0307468_10098593523300031740Hardwood Forest SoilMRQSARTVTRKEPTVYRRTLARAIEIAGGPENLGRFLACTPGEIAKWLSGESNPPMPFFLAMVDITAANALTPEALQNLPAARARRSTWMPAPDTR
Ga0307468_10138164223300031740Hardwood Forest SoilNVYRRTLARAIEIAGGEESLARFLACTPKEIAKWASGESNPPMPIFLAMVDVVAANALTPAALENLPAARARRSTWIPAQNGR
Ga0307473_1001089473300031820Hardwood Forest SoilVQHETIRTLVVRKEPTVYRRTLARAIEIAGGVEPLARFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWIPAPDSR
Ga0310907_1043871113300031847SoilMTRKEPTVYRRTLARAIEIAGGPENLGRFLACTPAEIAKWSSGESNPPMPFFLAMVDIAAANALTPEALENLPAARARRSTWAPAPHTR
Ga0310892_1043712223300031858SoilMAVQHATIGTLVVRNEPNVYRRTLARAIEIAGGEEALARFLACTPSEIAKWTSGESAPPMPFFLAMVDIAAANALTATALENLPAARARRSTWIPAPDSR
Ga0310900_1050045613300031908SoilVTRKETNVYRRTLARAIEIAGGPENLARFLACTPGELAKWSTGESNPPMPFFLAMVDITAANALTPEALQNLPAARARRSTWIPAPDTR
Ga0310890_1004809613300032075SoilVRKEPTVYRRTLARAIEIAGGVEALARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWVPVRDSR
Ga0310890_1125437513300032075SoilYRRTLARAIEIAGGVEPLARFLACTPSEIAKWTSGESAPPMPFFLAMVDIAAANALTATALENLPAARARRSTWIPAPDSR
Ga0214472_1023381223300033407SoilMATPPNYPPWKRKESTVYTRVLARAIEIAGSVEELTGFLASTPAEIGTWASGQFNPPMPIFLALVDVVAANALTPTALENLPAARARRSNAPK
Ga0247829_1074840613300033550SoilIEIAGGPENLGRFLACTPAEIAKWSSGESNPPMPFFLAMVDIAAANALTPEALENLPAARARRSTWIPAPHTR
Ga0364927_0168220_277_5463300034148SedimentVTRKEPTVYRRTLARAIEIAGGRENLARFLACTPAEIGKWASGESNPPMPIFLAMVDITAANALTPEALENLPAARARRSTWIPAPNTR
Ga0364943_0105652_104_3943300034354SedimentMRQSARTVTRKEPTVYRRTLARAIEIAGGPENLGRFLACTQGEIAKWSSGESNPPMPFFLAMVDITAANALTPEALQNLPAARARRSTWMPAPDTR
Ga0364941_192066_253_5223300034417SedimentVVRNEPNVYRRTLARAIEIAGGEEALARFLACTLSEIAKWTSGESAPPMPIFLAMVDIAAANALTATALENLPAARARRSTWITAPDSR
Ga0373948_0016173_707_9763300034817Rhizosphere SoilLVRKEPTVYRRTLARAIEIAGGVEALARFLACTPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRSTWVPARDSR
Ga0373948_0131865_371_6103300034817Rhizosphere SoilVVRKEPTVYRRTLARAIEIAGGVEPLALFLACSPSEIARWTSGEFNPPMPFFLAMVDIAAANELTATALENLPAARARRS

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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