NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F042588

Metagenome / Metatranscriptome Family F042588

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F042588
Family Type Metagenome / Metatranscriptome
Number of Sequences 158
Average Sequence Length 102 residues
Representative Sequence MTNKTFRMLLKAIAAFAITAAFGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSRVRVSGTGAMRRVEGVWHRKDASATLPRQIVAVAGL
Number of Associated Samples 122
Number of Associated Scaffolds 158

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 73.42 %
% of genes near scaffold ends (potentially truncated) 32.91 %
% of genes from short scaffolds (< 2000 bps) 89.87 %
Associated GOLD sequencing projects 115
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (52.532 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(22.152 % of family members)
Environment Ontology (ENVO) Unclassified
(27.848 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(43.671 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 25.19%    β-sheet: 20.61%    Coil/Unstructured: 54.20%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 158 Family Scaffolds
PF01431Peptidase_M13 2.53
PF07486Hydrolase_2 1.90
PF07311Dodecin 1.90
PF00912Transgly 1.27
PF06902Fer4_19 1.27
PF00903Glyoxalase 1.27
PF14023DUF4239 1.27
PF05649Peptidase_M13_N 1.27
PF00072Response_reg 0.63
PF13519VWA_2 0.63
PF07369DUF1488 0.63
PF07681DoxX 0.63
PF13545HTH_Crp_2 0.63
PF03729DUF308 0.63
PF03776MinE 0.63
PF17201Cache_3-Cache_2 0.63
PF10503Esterase_PHB 0.63
PF11953DUF3470 0.63
PF03734YkuD 0.63

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 158 Family Scaffolds
COG3590Predicted metalloendopeptidasePosttranslational modification, protein turnover, chaperones [O] 3.80
COG3360Flavin-binding protein dodecinGeneral function prediction only [R] 1.90
COG3773Cell wall hydrolase CwlJ, involved in spore germinationCell cycle control, cell division, chromosome partitioning [D] 1.90
COG0744Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidaseCell wall/membrane/envelope biogenesis [M] 1.27
COG4953Membrane carboxypeptidase/penicillin-binding protein PbpCCell wall/membrane/envelope biogenesis [M] 1.27
COG5009Membrane carboxypeptidase/penicillin-binding proteinCell wall/membrane/envelope biogenesis [M] 1.27
COG0851Septum formation topological specificity factor MinECell cycle control, cell division, chromosome partitioning [D] 0.63
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 0.63
COG2259Uncharacterized membrane protein YphA, DoxX/SURF4 familyFunction unknown [S] 0.63
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 0.63
COG3247Acid resistance membrane protein HdeD, DUF308 familyGeneral function prediction only [R] 0.63
COG4270Uncharacterized membrane proteinFunction unknown [S] 0.63

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A52.53 %
All OrganismsrootAll Organisms47.47 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2166559005|cont_contig43882Not Available913Open in IMG/M
2170459024|GZTSFBX01A3ZZSNot Available510Open in IMG/M
3300000041|ARcpr5oldR_c009463Not Available828Open in IMG/M
3300000043|ARcpr5yngRDRAFT_c005755Not Available1135Open in IMG/M
3300000044|ARSoilOldRDRAFT_c015840Not Available648Open in IMG/M
3300000955|JGI1027J12803_101563397Not Available904Open in IMG/M
3300004114|Ga0062593_101363048Not Available756Open in IMG/M
3300004479|Ga0062595_102280961All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans533Open in IMG/M
3300004480|Ga0062592_101471831Not Available652Open in IMG/M
3300005093|Ga0062594_100503551All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1025Open in IMG/M
3300005093|Ga0062594_102613249Not Available557Open in IMG/M
3300005164|Ga0066815_10114519Not Available519Open in IMG/M
3300005332|Ga0066388_101912480Not Available1060Open in IMG/M
3300005336|Ga0070680_101910551All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans514Open in IMG/M
3300005341|Ga0070691_10662550All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans623Open in IMG/M
3300005353|Ga0070669_100842197Not Available781Open in IMG/M
3300005355|Ga0070671_102016743Not Available514Open in IMG/M
3300005439|Ga0070711_100811377Not Available794Open in IMG/M
3300005439|Ga0070711_101915670Not Available521Open in IMG/M
3300005444|Ga0070694_100361976All Organisms → cellular organisms → Bacteria1127Open in IMG/M
3300005455|Ga0070663_101499061All Organisms → cellular organisms → Bacteria → Proteobacteria599Open in IMG/M
3300005536|Ga0070697_101197871All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans677Open in IMG/M
3300005545|Ga0070695_100774002Not Available767Open in IMG/M
3300005545|Ga0070695_101410661Not Available578Open in IMG/M
3300005548|Ga0070665_102668324All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans500Open in IMG/M
3300005615|Ga0070702_101221170All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales607Open in IMG/M
3300005719|Ga0068861_100696280Not Available944Open in IMG/M
3300005719|Ga0068861_102129884Not Available561Open in IMG/M
3300005843|Ga0068860_100374434All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans1405Open in IMG/M
3300006057|Ga0075026_100426779All Organisms → cellular organisms → Bacteria → Proteobacteria750Open in IMG/M
3300006057|Ga0075026_100873035Not Available551Open in IMG/M
3300006163|Ga0070715_10810823Not Available569Open in IMG/M
3300006172|Ga0075018_10246707All Organisms → cellular organisms → Bacteria → Proteobacteria863Open in IMG/M
3300006172|Ga0075018_10456632Not Available659Open in IMG/M
3300006196|Ga0075422_10060515All Organisms → cellular organisms → Bacteria → Proteobacteria1390Open in IMG/M
3300006881|Ga0068865_101084166All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales705Open in IMG/M
3300006881|Ga0068865_101916539All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans537Open in IMG/M
3300009094|Ga0111539_12726433All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans573Open in IMG/M
3300009098|Ga0105245_11454884Not Available736Open in IMG/M
3300009098|Ga0105245_12503883Not Available569Open in IMG/M
3300009148|Ga0105243_11055742All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria818Open in IMG/M
3300009148|Ga0105243_12320961All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans574Open in IMG/M
3300009156|Ga0111538_12981906All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi591Open in IMG/M
3300009156|Ga0111538_13610962Not Available536Open in IMG/M
3300009156|Ga0111538_13988446Not Available510Open in IMG/M
3300009174|Ga0105241_11953648Not Available576Open in IMG/M
3300009176|Ga0105242_11130523All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales799Open in IMG/M
3300009177|Ga0105248_12640446Not Available573Open in IMG/M
3300010043|Ga0126380_10384624All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1036Open in IMG/M
3300010047|Ga0126382_10567587Not Available927Open in IMG/M
3300010362|Ga0126377_10070751Not Available3103Open in IMG/M
3300010373|Ga0134128_10671904Not Available1151Open in IMG/M
3300010373|Ga0134128_12238601Not Available602Open in IMG/M
3300010375|Ga0105239_11055923All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans935Open in IMG/M
3300010375|Ga0105239_11892125Not Available692Open in IMG/M
3300010375|Ga0105239_11978904Not Available676Open in IMG/M
3300010375|Ga0105239_12195173Not Available642Open in IMG/M
3300010396|Ga0134126_12032883Not Available628Open in IMG/M
3300010397|Ga0134124_12089873All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans605Open in IMG/M
3300010400|Ga0134122_10638359All Organisms → cellular organisms → Bacteria990Open in IMG/M
3300012004|Ga0120134_1022915Not Available1004Open in IMG/M
3300012478|Ga0157328_1026523Not Available524Open in IMG/M
3300012500|Ga0157314_1004033All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1065Open in IMG/M
3300012501|Ga0157351_1004753Not Available1062Open in IMG/M
3300012502|Ga0157347_1013739All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales887Open in IMG/M
3300012509|Ga0157334_1028558All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans664Open in IMG/M
3300012510|Ga0157316_1081256All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans508Open in IMG/M
3300012511|Ga0157332_1034047Not Available664Open in IMG/M
3300012513|Ga0157326_1001665All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2423Open in IMG/M
3300012514|Ga0157330_1003315All Organisms → cellular organisms → Bacteria1241Open in IMG/M
3300012912|Ga0157306_10257247Not Available619Open in IMG/M
3300012914|Ga0157297_10329721Not Available586Open in IMG/M
3300012931|Ga0153915_13331584All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans521Open in IMG/M
3300012948|Ga0126375_10014147All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3508Open in IMG/M
3300012951|Ga0164300_10007983All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium3190Open in IMG/M
3300012951|Ga0164300_10030708All Organisms → cellular organisms → Bacteria1969Open in IMG/M
3300012951|Ga0164300_10031275Not Available1956Open in IMG/M
3300012951|Ga0164300_10095465All Organisms → cellular organisms → Bacteria1293Open in IMG/M
3300012951|Ga0164300_10289219All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium851Open in IMG/M
3300012951|Ga0164300_10518683All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans685Open in IMG/M
3300012955|Ga0164298_10162090All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1268Open in IMG/M
3300012955|Ga0164298_10488314Not Available820Open in IMG/M
3300012957|Ga0164303_10129945All Organisms → cellular organisms → Bacteria1300Open in IMG/M
3300012957|Ga0164303_10148189All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1238Open in IMG/M
3300012957|Ga0164303_10172434Not Available1169Open in IMG/M
3300012957|Ga0164303_10241163Not Available1030Open in IMG/M
3300012958|Ga0164299_11317339Not Available553Open in IMG/M
3300012960|Ga0164301_10313000Not Available1063Open in IMG/M
3300012961|Ga0164302_10099042All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae1606Open in IMG/M
3300012961|Ga0164302_10873011Not Available687Open in IMG/M
3300012964|Ga0153916_12212798Not Available618Open in IMG/M
3300012985|Ga0164308_10012635All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4668Open in IMG/M
3300012985|Ga0164308_10500592All Organisms → cellular organisms → Bacteria1016Open in IMG/M
3300012986|Ga0164304_10079304All Organisms → cellular organisms → Bacteria → Proteobacteria1893Open in IMG/M
3300012986|Ga0164304_10518196Not Available874Open in IMG/M
3300012986|Ga0164304_11261964All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales600Open in IMG/M
3300012986|Ga0164304_11400509Not Available574Open in IMG/M
3300012987|Ga0164307_10075029All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium2034Open in IMG/M
3300012988|Ga0164306_10074828All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium2135Open in IMG/M
3300012989|Ga0164305_10053263All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2381Open in IMG/M
3300012989|Ga0164305_10060351All Organisms → cellular organisms → Bacteria → Proteobacteria2267Open in IMG/M
3300013297|Ga0157378_10337659All Organisms → cellular organisms → Bacteria1468Open in IMG/M
3300013306|Ga0163162_11557585Not Available753Open in IMG/M
3300013306|Ga0163162_12455807Not Available599Open in IMG/M
3300013307|Ga0157372_11055166Not Available941Open in IMG/M
3300014326|Ga0157380_10817498Not Available950Open in IMG/M
3300014968|Ga0157379_10325445Not Available1404Open in IMG/M
3300015371|Ga0132258_12527718Not Available1284Open in IMG/M
3300015373|Ga0132257_102253290All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales705Open in IMG/M
3300017792|Ga0163161_10298896Not Available1267Open in IMG/M
3300018028|Ga0184608_10310249All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans693Open in IMG/M
3300019356|Ga0173481_10054053All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1393Open in IMG/M
3300019361|Ga0173482_10269202All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans734Open in IMG/M
3300020581|Ga0210399_10104407All Organisms → cellular organisms → Bacteria → Proteobacteria2321Open in IMG/M
3300021168|Ga0210406_10688739Not Available789Open in IMG/M
3300021478|Ga0210402_10622727Not Available1000Open in IMG/M
3300025900|Ga0207710_10298088Not Available814Open in IMG/M
3300025917|Ga0207660_11625904All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans520Open in IMG/M
3300025927|Ga0207687_11705775Not Available540Open in IMG/M
3300025931|Ga0207644_11099376Not Available668Open in IMG/M
3300025933|Ga0207706_10064803All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3217Open in IMG/M
3300025934|Ga0207686_10309713All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1176Open in IMG/M
3300025986|Ga0207658_11424323All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans634Open in IMG/M
3300026075|Ga0207708_10552054Not Available971Open in IMG/M
3300026118|Ga0207675_100962171All Organisms → cellular organisms → Bacteria871Open in IMG/M
3300026118|Ga0207675_101319999All Organisms → cellular organisms → Bacteria → PVC group742Open in IMG/M
3300026118|Ga0207675_102003064Not Available597Open in IMG/M
3300027378|Ga0209981_1044746Not Available665Open in IMG/M
3300027665|Ga0209983_1007779All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2194Open in IMG/M
3300027910|Ga0209583_10163112Not Available922Open in IMG/M
3300028587|Ga0247828_10967952Not Available553Open in IMG/M
3300028809|Ga0247824_10390852Not Available801Open in IMG/M
3300030019|Ga0311348_10852122Not Available679Open in IMG/M
3300031198|Ga0307500_10014260All Organisms → cellular organisms → Bacteria1654Open in IMG/M
3300031231|Ga0170824_125899382Not Available1356Open in IMG/M
3300031231|Ga0170824_128363294All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2189Open in IMG/M
3300031232|Ga0302323_100975948All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria940Open in IMG/M
3300031421|Ga0308194_10135201Not Available746Open in IMG/M
3300031469|Ga0170819_10529546All Organisms → cellular organisms → Bacteria → Proteobacteria1086Open in IMG/M
3300031474|Ga0170818_100808344Not Available752Open in IMG/M
3300031547|Ga0310887_10386896Not Available820Open in IMG/M
3300031562|Ga0310886_10573823Not Available689Open in IMG/M
3300031720|Ga0307469_10234460All Organisms → cellular organisms → Bacteria1463Open in IMG/M
3300031720|Ga0307469_10938388All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans804Open in IMG/M
3300031740|Ga0307468_101433105All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans636Open in IMG/M
3300031820|Ga0307473_11215289Not Available561Open in IMG/M
3300031943|Ga0310885_10688784Not Available573Open in IMG/M
3300031949|Ga0214473_10115132All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3140Open in IMG/M
3300032001|Ga0306922_10183893All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2241Open in IMG/M
3300032003|Ga0310897_10505651Not Available587Open in IMG/M
3300032075|Ga0310890_10047200All Organisms → cellular organisms → Bacteria → Proteobacteria2442Open in IMG/M
3300032122|Ga0310895_10366721Not Available698Open in IMG/M
3300032174|Ga0307470_10199658All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1277Open in IMG/M
3300032180|Ga0307471_103571232All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans550Open in IMG/M
3300032205|Ga0307472_101868383Not Available598Open in IMG/M
3300032205|Ga0307472_102220890Not Available554Open in IMG/M
3300032211|Ga0310896_10571219Not Available628Open in IMG/M
3300032892|Ga0335081_10963597All Organisms → cellular organisms → Bacteria → Proteobacteria998Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil22.15%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.70%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.06%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.43%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.80%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.16%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.16%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.16%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.16%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.16%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.16%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.53%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.53%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.53%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere2.53%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.90%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands1.27%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.27%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen1.27%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.27%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.27%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.27%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.27%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.27%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.63%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.63%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.63%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.63%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.63%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.63%
Arabidopsis RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere0.63%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.63%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.63%
SimulatedEngineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated0.63%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2166559005Simulated microbial communities from Lyon, FranceEngineeredOpen in IMG/M
2170459024Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)EnvironmentalOpen in IMG/M
3300000041Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphereHost-AssociatedOpen in IMG/M
3300000043Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphereHost-AssociatedOpen in IMG/M
3300000044Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil oldHost-AssociatedOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005164Soil and rhizosphere microbial communities from Laval, Canada - mgLACEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012004Permafrost microbial communities from Nunavut, Canada - A30_5cm_6MEnvironmentalOpen in IMG/M
3300012478Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.9.old.080610Host-AssociatedOpen in IMG/M
3300012500Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610Host-AssociatedOpen in IMG/M
3300012501Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610EnvironmentalOpen in IMG/M
3300012502Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610Host-AssociatedOpen in IMG/M
3300012509Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6EnvironmentalOpen in IMG/M
3300012510Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610Host-AssociatedOpen in IMG/M
3300012511Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10EnvironmentalOpen in IMG/M
3300012513Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510Host-AssociatedOpen in IMG/M
3300012514Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510EnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300012914Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027378Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027665Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300030019II_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
cont_0882.000033302166559005SimulatedMTNKTFCILLKTIAAFAITASFGSASFAGEITIREGKRYCATLALNSVERLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKDASTTLPRQIVAVAGL
FD1_064309602170459024Grass SoilMTNKTFRILLKAIAAFAITAAFGSASFAGDFTVREGKRYCATLALNSVERLADNALIARRFRALGFSKVRVSGAGAMRRVEGVWHRKDASATLPHQIVAVARL
ARcpr5oldR_00946313300000041Arabidopsis RhizosphereMTNKTFRMLLKAIAAFAITAAFGSASFAGDFTVREGKRYCATLSLNSVERLADNALIARKFRALGFSKVRVSGAGPVRRVEGVWHRKDASATLPRQIVAVAS
ARcpr5yngRDRAFT_00575533300000043Arabidopsis RhizosphereMTNKTFRMLLKAIAAFAITAAFGSASFAGDFTVREGKRYCATLSLNSVERLADNALIARKFRALGFSKVRVSGAGPVRRVEGVWHRKDASATLPRQIVAVASL*
ARSoilOldRDRAFT_01584023300000044Arabidopsis RhizosphereMTNKTFRILLKAIAAFAITAAFGSATFAGDFTVREGKRYCATLSLNSVERLADNALIAKKFRALGFSRVHVSGTGAMRRVEGVWHRKDANATLPRQIVAVAGL*
JGI1027J12803_10156339713300000955SoilMTNIRILLQALAAFTITVAFSGASFAGEFTVQATLSLNSVERLADDALIARKFRALGFAKVRVSGAGAIRRVEGVWPREDASAPLPPQIVAVASL*
Ga0062593_10136304823300004114SoilMTFHIRILLKAIGALVIATIVSPSFAGEFTVHSGKRYQATLSLNSVELSDNALIAEKFRAMGFSKVRVSGAGAVRRVEGVWSRNDASATLPRQIVA
Ga0062595_10228096113300004479SoilMTNKTFCILLKTIAAFAITASFGSASFAGEITIREGKRYCATLALNSVERLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKDASTTLPRQIVAVAGL*
Ga0062592_10147183123300004480SoilMTFHIRILLKAIGALVIATIVSPSFAGEFTVHSGKRYQATLSLNSVELSDNALIAEKFRAMGFSKVRVSGAGAVRRVEGVWSRNDASATLPRQIVAVARL*
Ga0062594_10050355123300005093SoilMFLKAIAAFAITVFGSASFAGDFTVREGKRYCAILSLNSVERLADNSLIARKFRALGFSKVHVSNTGAMRRVEGVWHRKDASATLPRQIVAVARL*
Ga0062594_10261324923300005093SoilAAFGSASFAGEFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSGVRVSGTGAKRRVEGVWHLKDASTTLPRQIVAVAGL*
Ga0066815_1011451913300005164SoilMTKKSRPNSMTALVAFIIATTFASASSFAAQFTVHQGKRYQAILALTSVEQLAGNAQIAQKFRDLGFSRVRVSGAGTTRRVEGVWPGKDTSANMPPQIVAVAVSGG*
Ga0066388_10191248013300005332Tropical Forest SoilMTNNTVCLLLKTLAALAITATFSGASLAGEFTVKQGKHYRATLSLNSVEQLADNALIASKFRALGFSSVRVSGAGAIRRVEGVWPRKDASAHLPPQIIAVAKL*
Ga0070680_10191055113300005336Corn RhizosphereMTKKTFRMLLKAIAAFAITAAFGNASFAGDFTVREGKRYCATLALNSVEQLADNALIARRFRALGFSRVHVSGTGAMRRVEGVWHRKDASATLPRQIVAVARL*
Ga0070691_1066255013300005341Corn, Switchgrass And Miscanthus RhizosphereMTNKTFRILLKAMAFAITAALGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSRVRVSGTGAKRRVEGVWHLKDASTTLPRQIVAVAGL*
Ga0070669_10084219723300005353Switchgrass RhizosphereMTKKTFRMLLKAIAAFAITAAFGNASFAGDFTVREGKRYCATLALNSVEQLADNALIARRFRALGFSRVHVSGTGAMRRVEGVWHRKDASATLPRQIVAVAGL*
Ga0070671_10201674313300005355Switchgrass RhizosphereTMTNKTSRMFLKAIAAFAITVFGSASFAGDFTVREGKRYCAILSLNSVERLADNSLIARKFRALGFSKVHVSNTGAMRRVEGVWHRKDASATLPRQIVAVARL*
Ga0070711_10081137713300005439Corn, Switchgrass And Miscanthus RhizosphereMTNKTFRMLLKAIAAFAVTAAFGSASFAGDFTVHQGKRYCATLALNSVERLADNALIARKFRALGFSRVRVSGTGAMRRVEGVWFHKDASATLPRQIVAVDGL*
Ga0070711_10191567013300005439Corn, Switchgrass And Miscanthus RhizosphereMTDKIARKFPKALAAFAIAASFVSASSLAGEFTVEQGKHYRATLSLTSVERLINNELIARKFRALGFSKVHVSGSGATRRVEGVWPGKDVST
Ga0070694_10036197623300005444Corn, Switchgrass And Miscanthus RhizosphereMTNKTFRILLKAMAFAITAALGSASFAGDFTVREGKRYCATLALNSVERLADNALIARKFRALGFSSVRVSGTGASRRVEGVWGRKDASTTLPRQIIAV
Ga0070663_10149906113300005455Corn RhizosphereYRTSAMTKKTFRMLLKAIAAFAITAAFGNASFAGDFTVREGKRYCATLALNSVEQLADNALIARRFRALGFSRVHVSGTGAMRRVEGVWHRKDASATLPRQIVAVASNAGVP*
Ga0070697_10119787113300005536Corn, Switchgrass And Miscanthus RhizosphereMTNKTFRMLLKAIAAFVITAAFGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARRFRALGFSRVHVSGTGAMRRVEGVWHRKDASATLPRQIVAVASL*
Ga0070695_10077400223300005545Corn, Switchgrass And Miscanthus RhizosphereKAAENDKERTSCMTFHIRILLKAIGALVIATIVSPSFAGEFTVHSGKRYQATLSLNSVELSDNALIAEKFRAMGFSKVRVSGAGAVRRVEGVWSRNDASATLPRQIVAVARL*
Ga0070695_10141066113300005545Corn, Switchgrass And Miscanthus RhizosphereMTKKTFRMLLKAIAAFAITAAFGNASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSRVRVSGTGAKRRVEGVWHLKDASTTLPRQIVAVAGL*
Ga0070665_10266832413300005548Switchgrass RhizosphereMTNKTFRILLKAIAAFAITAALGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKDASTTLP
Ga0070702_10122117023300005615Corn, Switchgrass And Miscanthus RhizosphereMTNKTFRILLKAMAFAITAALGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSRVRVSGTGAKRRVEGVWHLKDASTTVPRQIVAVAGL*
Ga0068861_10069628013300005719Switchgrass RhizosphereMTNKTFRILLKAMAFAITAALGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSKVRVSGAGAVRRVEGVWPRKDASATLPRQIVAVAGL*
Ga0068861_10212988413300005719Switchgrass RhizosphereMTFHIRILLKAIGALVIATIVSPSFAGEFTVHSGKRYQATLSLNSVELSDNALIAEKFRAMGFSKVRVSGAGAVRRVEGVWSRNDASATLPRQIV
Ga0068860_10037443423300005843Switchgrass RhizosphereMTNKTFRILLKAMAFAITAALGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSRVRVSGTGAMRRVEGVWHRKDASATLPRQIVAVAGL*
Ga0075026_10042677923300006057WatershedsRLMRLGAGFAAGPKRMFTMTDKTDRILLKAVAALAITAAFGSASFAGEFTVHQGERYRAILALRSMERLVDNALIAQKFRDLGFAGVKVSGAGATRRVEGVWPGKDKSANMPPQIVAVAKL*
Ga0075026_10087303513300006057WatershedsMTNKTLRNSLIALAAFAIAATFVSASSFAAEFTVHHGMRYRAILVLKSVEQLANNALIAQKFRDLGFSGVRVSGEGATRRVEGVWPGKDTSANMPPQIVVVAQL*
Ga0070715_1081082313300006163Corn, Switchgrass And Miscanthus RhizosphereMTNKTFRMLLKAIAAFAVTAAFGSASFAGDFTVHQGKRYCATLALNSVERLADNALIARKFRALGFSRVRVSGTGAMRRVEGVWFRKDASATLPRQIVAVDGL*
Ga0075018_1024670723300006172WatershedsMSNKTVRILLKAVAALAITATFGSASFAGEFTVHQGERYRAILALRSMERLVDNPLIAQKFRDLGFAGVKVSGAGATRRVEGVWPSKDTSANMPPQIVAVAKL*
Ga0075018_1045663213300006172WatershedsMTNKTFRMLLKAIATFAVTAAFGSASFAGDFTVHQGKRYCATLALNSVERLADNALIARKFRALGFSRVRVSGTGAMRRVEGVWFRKDASATLPRQIVAVDGL*
Ga0075422_1006051513300006196Populus RhizosphereMTNKTFRMLLKAIAAFAITAAFGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSKVRVSGAGAVRRVEGIWHRKDASATLPRQIVAVARL*
Ga0068865_10108416613300006881Miscanthus RhizosphereFSLMLLKAASGPEAEDICMTDKIARKFPKALATFAIAASFVSASSLAGEFTVEQGKHYRATLSLKSVERLADNELIARKFRALGFAKVRVSGSGATRKVEGVWPGKDASAPLPRQIVAVARM*
Ga0068865_10191653913300006881Miscanthus RhizosphereMTNKTFRILLKAMAFAITAALGSASFAGDFTVREGKRYCAILSLNSVERLADNSLIARKFRALGFSKVHVSNTGAMRRVEGVWHRKDASATLPRQIVAVASNAGVP*
Ga0111539_1272643313300009094Populus RhizosphereMTNKTFRMLLKAIAAFAIAAAFGSASFAGDFTVREGKRYCATLALSPVEQLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKDASTTLPRQIVAVAGL*
Ga0105245_1145488423300009098Miscanthus RhizosphereMTNKTFRILLKAMAFAITAALGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSKVRVSSAGAVRRVEGVWFRKDASAAPPRQIVAIARL*
Ga0105245_1250388323300009098Miscanthus RhizosphereMGEGQSAKAAVERGSFAAKSKRTSTMTNKTSRMFLKAIAAFAITVFGSASFAGDFTVREGKRYCAILSLNSVERLADNSLIARKFRALGFSKVHVSNTGAMRRVEGVWHRKDASTTLPRQIVAVAGL*
Ga0105243_1105574223300009148Miscanthus RhizosphereMTDKIARKFPKALATFAIAASFVSASSLAGEFTVEQGKHYRATLSLKSVERLADNELIARKFRALGFAKVRVSGSGATRKVEGVWPGKDASAPLPRQIVAVARM*
Ga0105243_1232096113300009148Miscanthus RhizosphereMTNKTFCISLKTIAAFAITASFASASFAGEITIREGKRYCATLALNSVERLADNALIARKFRALGFSRVRVSGTGAMRRVEGVWHRKDAVAGL*
Ga0111538_1298190613300009156Populus RhizosphereMTNKTVRNFPKALMAFVIAASFVSASLAGEFTVERGKLYRATLYLKSVERLADNELIARKFRALGFSRVRVSGAGATRRVEGVWPGKDTSASMPPQIVAVAKL*
Ga0111538_1361096213300009156Populus RhizosphereMTNKTFRMLLKAIAAFAITATFGSASFAGDFTVHEGKRYGATLALNSVERLADNALIARKFRALGFSKVRVSGAGAVRRVEGIWHRKDASATLPRQIVAVARL*
Ga0111538_1398844613300009156Populus RhizosphereMTFHIRILLKAIGALVIATIVSPSFAGEFTVHSGKRYQATLSLNSVELSDNALIAEKFRAMGFSKVRVSGAGALRRVEGVWSRRDASATLPRQIVAVARL*
Ga0105241_1195364823300009174Corn RhizosphereMTNKTFRILLKAIAAFAITAALGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSRVRVSGTGAMRRVEGVWHRKDASATLPRQIVAVAGL*
Ga0105242_1113052313300009176Miscanthus RhizosphereMTDKIARKFPKALAAFAIAASFVSASSLAGEFTVEQGKHYRATLSLKSVERLVDNELIARKFRALGFSKVRVSGSGATRKVEGVWPGKDASAPLPRQIVAVA
Ga0105248_1264044613300009177Switchgrass RhizosphereMTNKTFRILLKAIAAFAITAALGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSRVRVSGTGAKRRVEGVWHLKDASTTLPRQIVAVAGL*
Ga0126380_1038462413300010043Tropical Forest SoilNETFRILLKAVVAFAITAVFGNAGFAGEFTVHQGKRYQATLALNSVERLADNAQIARKFRALGFTSVHVSGTGAMRRVEGVWHHKDASTTLPRQIVAVAGL*
Ga0126382_1056758713300010047Tropical Forest SoilMTNETFRILLKAVVAFAITAVFGNAGFAGESTVHQGKRYQATLALNSVERLADNALIARKFRALGFTSVHVSGTGAMRRVEGVWHHKDASTTLPRQIVAVAGL*
Ga0126377_1007075163300010362Tropical Forest SoilMTNETFRILLKAIVAFAITAVFGNAGFAGEFTVHQGKRYQATLALNSVERLADNALIARKFRALGFTSVHVSGTGAMRRVEGVWHHKDASTTLPRQIVAVAGL*
Ga0134128_1067190413300010373Terrestrial SoilMTNKTSRMFLKAIAAFAITVFGSASFAGDFTVREGKRYCAILSLNSVERLADNSLIARKFRALGFSGVHVSGTGAMRRVEGVWHRKDASATLPRQIVAVARL*
Ga0134128_1223860113300010373Terrestrial SoilMTNKTFCTLLKAIAAFAITAAFGSASFAGDFTVREGKRYCATLALSPVEQLADNALIARKFRALGFSSVRVSGTGAKRSVEGVWHRKDASTTLPRQIVAVAGL*
Ga0105239_1105592313300010375Corn RhizosphereMTNKTFRILLKAIVAFAITAAFGSAGFAGEFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSSVHVSGAGAKRRVEGVWHRKDASTTL
Ga0105239_1189212523300010375Corn RhizosphereMTFHIRILLKAIGALVIATIVSPSFAGEFTVHSGKRYQATLSLNSVELSDNALIAEKFRAVGFSKVRVSGAGAVRRVEGVWSRNDASATLPRQIVAVARL*
Ga0105239_1197890413300010375Corn RhizosphereKTFRTLLKAIAAFAITAAFGSASFAGDFTVREGKRYCATLALSPVEQLADNALIARKFRALGFSSVRVSGTGAKRSVEGVWHRKDASTTLPRQIVAVAGL*
Ga0105239_1219517313300010375Corn RhizosphereMTNKTFRILLKTIAAFAITASFGSASFAGEITIREGKRYCATLALNSVERLADNALIARKFRALGFASVCVSGTGAKRRVEGVWHRKDASTTLPRQIVAV
Ga0134126_1203288313300010396Terrestrial SoilIFASKSKRTSTMTNKTSRMFLKAIAAFAITVFGSASFAGDFTVREGKRYCAILSLNSVERLADNSLIARKFRALGFSKVHVSNTGAMRRVEGVWHRKDASATLPRQIVAVARL*
Ga0134124_1208987313300010397Terrestrial SoilMTNKTFRTLLKAIAAFAITAAFGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSRVRVSGTGAMRRVEGVWHRKDASATLPRQIVAVAGL*
Ga0134122_1063835913300010400Terrestrial SoilMTNKTFRILLKAMAFAITAALGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSKVRVSGAGAVRRVEGVWPRKEASATLPRQIVAVAG
Ga0120134_102291523300012004PermafrostMTNKTLRNSLTALAAFAIAATFISASSFAAEFTVHQGQRYRAILALKSIEQLADNALIAQKFRDLGFSRVRVSGAGATRRVEGVWPGKDTSANMPPQIVAVAAL*
Ga0157328_102652323300012478Arabidopsis RhizosphereRILLKTIAAFAITASLGSASFAGDFTVHEGKRYCATLSLNSVERLADNALIARKFRALGFSKVRVSGAGPVRRVEGVWHRKDASATLPRQIVAVASL*
Ga0157314_100403333300012500Arabidopsis RhizosphereMTNKTFRMLLKAIAAFAITAAFGSASFAGDFTVREGKRYCATLSLNSVERLADNALIARKFRALGFSKVRVSGAGPVRRVEGVWHRKGCQ
Ga0157351_100475333300012501Unplanted SoilMTNKTFRMLLKAIAAFAITAAFGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSRVRVSGTGAMRRVEGVWHRKDANATLPRQIVAVAGL*
Ga0157347_101373923300012502Arabidopsis RhizosphereAFGSATFAGDFTVREGKRYCATLSLNSVERLADNALIARKFHALGSSRVHVSGTGAMRRVEGVWHRKDANATLPRQIVAVAGL*
Ga0157334_102855813300012509SoilMTNKTFRILLKAIAAFAITAAFGSASFAGDFTVREGKRYCATLSLNSVERLADNALIARKFRALGFSKVRVSGAGPVRRVEGVWHRKDASATLPRQIVAVASL*
Ga0157316_108125613300012510Arabidopsis RhizosphereAIAAFAITAAFGSASFAGDFTVREGKRYCATLSLNSVERLADNALIARRFRALGFSRVHVSGTGAMRRVEGVWHRKDASATLPRQIVAVASL*
Ga0157332_103404723300012511SoilMTNKTFRMLLKAIAAFAITAAFGSASFAGEFTVREGKRYCATLSLNSVERLADNALIARKFRALGFSKVRVSGAGPVRRVEGVWHRKDASATLPRQIVAVASL*
Ga0157326_100166513300012513Arabidopsis RhizosphereMTNKTFRMLLKAIAAFAITAAFGSATFAGDFTVREGKRYCATLSLNSVEQLADNALIAKKFRALGFSRVHVSGTGAMRRVEGVWHRKDANATLPRQIVAVAGL*
Ga0157330_100331523300012514SoilMTNKTFRILLKAIAAFAITAAFGSASFAGDFTVREGKRYCATLALNSVEQLADNALIAKKFRALGFSRVHVSGTGAMRRVEGVWHRKDASTTLPRQIVAVAGL*
Ga0157306_1025724723300012912SoilMTNKTFRMLPKAIAAFAITATFGSASFAGDFTVHEGKRYGATLALNSVERLADNALIARKFRALGFSKVRVSGAGAVRRVEGIWHRKDASATLPRQIVAVARL*
Ga0157297_1032972123300012914SoilRCAKAAENDKERTSCMTFHIRILLKAIGALVIATIVSPSFAGEFTVHSGKRYQATLSLNSVELSDNALIAEKFRAMGFSKVRVSGAGAVRRVEGVWSRNDASATLPRQIVAVARL*
Ga0153915_1333158413300012931Freshwater WetlandsMTNKTFRMLLKAIAAFAITAAFGSASFAGDFTVREGKRYCATVALNSVEQLADNALIARKFRALGFSRVHVSGTGATRRVEGVWHRKDASATLPRQIVAVAGL*
Ga0126375_1001414733300012948Tropical Forest SoilMTNETFRILLKAVVAFAITAVFGNAGFAGEFTVHQGKRYQATLALNSVERLADNALIARKFRALGFTSVHVSGTGAMRRVEGVWHHKDASTTLPRQIVAVAGL*
Ga0164300_1000798363300012951SoilMTNKIFRMLLKAIAAFAITASFGSASFAGEITIREGKRYCATLALNSVERLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKDASTTLPRQIVAVAGL*
Ga0164300_1003070833300012951SoilMTNKTFRTLLKAIAAFAITAAFGSASFAGDFTVREGKRYCATLALSPVEQLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKDASTTLPRQIVAVAGL*
Ga0164300_1003127533300012951SoilMTNTTFCMLLKAIAAFVITAAFASASFAGDFTVHQGKRYCATLALNSVERLADNALIARKFRALGFSRVRVSGTGAMRRVEGVWFRKDASATLPRQIVAVDGL*
Ga0164300_1009546523300012951SoilMTKKSRPNSMTALVAFVIATTFASASSFAAQFTVHQGKRYQAILALTSVEQLAGNAQIAQKFRDLGFSRVRVSGAGTTRRVEGVWPGKDTSANMPPQIVAVAVSGG*
Ga0164300_1028921913300012951SoilTFRILLKAIVAFAITAAFGSASFAGEFTVREGRRYCATLALNSVEQLADNALIARKFRALGFSGVRVSGTGAKRRVEGVWHLKDASTTLPRQIVAVAGL*
Ga0164300_1051868313300012951SoilMTKKTFRMLLKAIAAFAITAAFGNASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSRVRVSGAGAVRRVEGVWRRKDA
Ga0164298_1016209033300012955SoilAITAAFGSASFAGDFTVREGKRYCATLALSPVEQLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKDASTTLPRQIVAVAGL*
Ga0164298_1048831423300012955SoilMTKKSRPNSMTALVAFVIATTLASASSFAAQFTVHQGKRYQAILALTSVEQLAGNAQIAQKFRDLGFSRVRVSGAGTTRRVEGVWPGKDTSANMPPQIVAVAVSGG*
Ga0164303_1012994513300012957SoilMTNKTFRTLLKAIAAFAITAAFGSASFAGDFTVREGKRYCATLALSPVEQLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKDASTTLPRQI
Ga0164303_1014818923300012957SoilMTNKIFRMLLKAIAAFAITASFGSASFAGEITIREGKRYCATLALNSVERLADNALIARKFRALGFSSVRVSGTGAMRRVEGVWHRKDASTTLPRQIVAVAGL*
Ga0164303_1017243423300012957SoilMTNTTFCMLLKAIAAFVITAAFASASFAGDFTVHQGKRYCATLALNSVERLADNALIARKFRALGFSRVRVSGTGAIRRAEGLWLRKDATAPLPHQIVEVAKL*
Ga0164303_1024116323300012957SoilKAIAAFAITASFGSASFAGEITIREGKRYCATLAINSVERLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKDASTTLPRQIVAVAGL*
Ga0164299_1131733913300012958SoilTFRTLLKAIAAFAITAAFGSASFAGDFTVREGKRYCATLALSPVEQLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKDASTTLPRQIVAVAGL*
Ga0164301_1031300023300012960SoilMTKKSRPNSMTALVAFIIAATFASASSFAAQFTVHQGKRYQAILALTSVEQLAGNAQIAQKFRDLGFSRVRVSGAGTTRRVEGVWPGKDTSANMPPQIVAVAVSGG*
Ga0164302_1009904233300012961SoilMTNTTFCMLLKAIAAFVITAAFASASFAGDFTVHQGKRYCATLALNSVERLADNALIARKFRALGFSRVRNSGTGAVRRVEGVWFRKDASATLPHQIVAVDGL*
Ga0164302_1087301123300012961SoilLRPQKQEDVHNDQQHLSHVRKAIAAFAITAFASASFAGDFTVHQGKRYCATLALNSVERLADNALIARKFRALGFSRVRVSGTGAMRRVEGVWFRKDASATLPRQIVAVDGL*
Ga0153916_1221279823300012964Freshwater WetlandsLLKAVAVLAITATFGSTSFAGEFTVHQGKQYRATLALNSVERLTDNTLIARKFRALGFSKVRVSGAGAVRRVEGVWHRKDARTTLPRQIVTVAGS*
Ga0164308_1001263553300012985SoilMTNTTFCMLLKAIAAFVITAAFASASFAGDFTVHQGKRYCATLALNSVERLADNALIARKFRALGFSRVRVSGTGAVRRVEGVWFRKDASATLPRQIVAVDGL*
Ga0164308_1050059213300012985SoilMTKKSRPNSMTALVAFVIATTFASASSFAAQFTVHQGKRYQAILALTSVEQLAGNAQIAQKFRDLGFSRVRVSGAGTTRRVEGVWPGKDTSANM
Ga0164304_1007930413300012986SoilMTNKIFRMLLKAIAAFAITASFGSASFAGEITIREGKRYCATLALNSVERLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKDASTTLPRQ
Ga0164304_1051819613300012986SoilMTNTTFCMLLKAIAAFVITAAFASASFAGDFTVHQGKRYCATLALNSVERLADNALIARKFRALGFSRVRVSGTGAMRRVEGVWFRKDASATLPRQIVAVAGL*
Ga0164304_1126196423300012986SoilAITAALGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSRVRVSGTGAMRRVEGVWHRKDASATLPRQIVAVAGL*
Ga0164304_1140050923300012986SoilALGSASFAGDFTVREGKRYCATLALNSVEQLADNALSARKFRALGFSKVRVSGAGAVRRVEGVWRRKDASATLPRQIVAVASL*
Ga0164307_1007502913300012987SoilIATTFASASSFAAQFTVHQGKRYQAILALTSVEQLAGNAQIAQKFRDLGFSRVRVSGAGTTRRVEGVWPGKDTSANMPPQIVAVAVSGG*
Ga0164306_1007482833300012988SoilMTNTTFCMLLKAIAAFVITAAFASASFAGDFTVHQGKRYCATLALNSVERLADNALIARKFRALGFSRVRVSGTGAMRRVEGVSFRKDASATLPRQIVAVDGL*
Ga0164305_1005326313300012989SoilNTTFCMLLKAIAAFVITAAFASASFAGDFTVHQGKRYCATLALNSVERLADNALIARKFRALGFSRVRVSGTGAMRRAEGLWLRKDATAPLPHQIVEVAKL*
Ga0164305_1006035133300012989SoilMLLKAIAAFAITASFGSASFAGEITIREGKRYCATLALNSVERLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKDASTTLPRQIVAVAGL*
Ga0157378_1033765913300013297Miscanthus RhizosphereMTNKTFRILLKAMAFAITAALGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSRVRVSGTGAERRVEGVWHLKDASTTLPRQIVAVAGL*
Ga0163162_1155758523300013306Switchgrass RhizosphereAFAITAAFGSASFAGDFTVREGKRYCATLALSPVEQLADNALIARKFRALGFSSVRVSGTGAKRSVEGVWHRKDASTTLPRQIVAVAGL*
Ga0163162_1245580713300013306Switchgrass RhizosphereLKAMAFAITAALGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSRVRVSGTGAKRRVEGVWHLKDASTTLPRQIVAVAGL*
Ga0157372_1105516623300013307Corn RhizosphereMTNKTFCTLLKAIAAFAITAAFGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSRVRVSGTGAMRRVEGVWHRKDASTTLPRQIVAVAGL*
Ga0157380_1081749823300014326Switchgrass RhizosphereMTFNIRILLKAVGALVIAAIVSPSFAGEFTVHSGKRYQATLSLNSVELSDNALIAEKFRAMGFSKVRVSGAGAVRRVEGVWSRNDASATLPRQIVAVARL*
Ga0157379_1032544543300014968Switchgrass RhizosphereMTNKTSRMFLKAIAAFAITVFGSASFAGDFTVREGKRYCAILSLNSVERLADNSLIARKFRALGFSKVHVSNTGAMRRVEGVWHR
Ga0132258_1252771813300015371Arabidopsis RhizosphereMTNKTFRTLLKAAAFAITVSFVNASFAGEITVREGKRYCATIALNSVERLADNALIARKFRALGFSSVRVSGTGAMRRVEGVWHRKDASTTLPRQIVAVAGL*
Ga0132257_10225329023300015373Arabidopsis RhizosphereMTNKIFRMLLKAIAAFAITASFGSASFAGDFTVREGKRYCATLALNSVERLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKDASTTLPRQIVAVA
Ga0163161_1029889613300017792Switchgrass RhizosphereLNAKRPLRSPKSYRTSAMTNKTFRILLKAMAFAITAALGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSRVRVSGTGAKRRVEGVWHLKDASTTLPRQIVAVAGL
Ga0184608_1031024913300018028Groundwater SedimentMTNKIFRMLLKAIAAFAITASFGSASFAGDFTVREGKRYCATLALNSVERLADNALIARKFRALGFSKVRVSGAGEVRRVEGVWRRKDASATLPRQIVAVASFNAGVR
Ga0173481_1005405323300019356SoilMTNKTFRMLLKAIAVFAITAAFGSASFAGDFTVREGKRYCATLALNSVERLADNALIARKFRALGFSGVRVSGTGAMRCVEGVWPRKDATAPLPRQIVAVASL
Ga0173482_1026920213300019361SoilMTNKTFRTLLKAIAAFAITAAFGSASFAGDFTVREGKRYCATLALSPVEQLADNALIARKFRALGFSKVRVSGAGAVRRVEGVWRRKDASATLPRQIVAVASL
Ga0210399_1010440733300020581SoilMSNKTVRILLKAVAALAITATFGSASFAGEFTVHQGERYRAILALRSMERLVDNALIAQKFRDLGFAGVKVSGAGARRRVEGVWPGKDTSANMPPQIVAVAKL
Ga0210406_1068873913300021168SoilMTNKTFRMLLKAIAAFAVTAAFGSASFAGDFTVHQGKRYCATLALNSVERLADNALIARKFRALGFSRVRVSGTGAMRRVEGVWFRKDASATLPRQIVAVDGL
Ga0210402_1062272713300021478SoilMTNKTFRMLLKAIAAFAVTAAFGSASFAGDFTVHQGKRYCATLALNSVERLADNALIARKFRALGFSRVRVSGTGAMRRVEGVWFHKDASATLPRQIVAVDGL
Ga0207710_1029808823300025900Switchgrass RhizosphereMTNKTFRILLKAMAFAITAALGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSRVRVSGTGAKRRVEGVWHLKDASTTLPRQIVAVAGL
Ga0207660_1162590413300025917Corn RhizosphereMTKKTFRMLLKAIAAFAITAAFGNASFAGDFTVREGKRYCATLALNSVEQLADNALIARRFRALGFSRVHVSGTGAMRRVEGVWHRKDASATLPRQIVAVAGL
Ga0207687_1170577523300025927Miscanthus RhizosphereMTNKTFRILLKAMAFAITAALGSASFAGDFTVREGKRYCAILSLNSVERLADNSLIARKFRALGFSKVHVSNTGAMRRVEGVWHRKDASTTLPRQIVAVAGL
Ga0207644_1109937623300025931Switchgrass RhizosphereMTNKTFRILLKAMAFAITAALGSASFAGDFTVREGKRYCAILSLNSVERLADNSLIARKFRALGFSKVHVSNTGAMRRVEGVWHRKDASATLPRQIVAVARL
Ga0207706_1006480323300025933Corn RhizosphereMTNKTFRILLKAMAFAITAALGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARRFRALGFSRVHVSGTGAMRRVEGVWHRKDASATLPRQIVAVARL
Ga0207686_1030971323300025934Miscanthus RhizosphereMTNKTSRMFLKAIAAFAITVFGSASFAGDFTVREGKRYCAILSLNSVERLADNSLIARKFRALGFSKVHVSNTGAMRRVEGVWHRKDASATLPRQIVAVAGL
Ga0207658_1142432313300025986Switchgrass RhizosphereMTNKTFRILLKAMAFAITAALGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSRVRVSGTGAMRRVEGVWHRKDASATLPRQIVAVAGL
Ga0207708_1055205423300026075Corn, Switchgrass And Miscanthus RhizosphereMTFNIRILLKAVGALVIAAIVSPSFAGEFTVHSGKRYQATLSLNSVELSDNALIAEKFRAMGFSKVRVSGAGAVRRVEGVWSRNDASATLPRQIVAVARL
Ga0207675_10096217113300026118Switchgrass RhizosphereMTNKTFRILLKAMAFAITAALGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSKVRVSGAGAVRRVEGVWPRKDASATLPRQIVAVAGL
Ga0207675_10131999913300026118Switchgrass RhizosphereMTNKTSRMFLKAIAAFAITVFGSASFAGDFTVREGKRYCAILSLNSVERLADNSLIARKFRALGFSKVHVSNTGAMRRVEGVWHRKDASATLPRQIVAVARL
Ga0207675_10200306423300026118Switchgrass RhizosphereMTNKTFRILLKAIVAFAITAAFGSAGFAGEFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSGVRVSGTGAKRRVEGVWHLKDASTTLPRQIVAVAGL
Ga0209981_104474613300027378Arabidopsis Thaliana RhizosphereMTNKTFRMLLKAIAAFAITATFGSASFAGDFTVHEGKRYGATLALNSVERLADNALIARKFRALGFSGVRVSGAGAIRRVEGVWPRKDASATLPPQIVAVAGL
Ga0209983_100777923300027665Arabidopsis Thaliana RhizosphereMTNKTFRMLLKAIAAFAITATFGSASFAGDFTVHQGKRYCATLALNSVERLADNALIARKFRALGFSKVRVSGAGAVRRVEGIWHRKDASATLPRQIVAVARL
Ga0209583_1016311213300027910WatershedsMTNKTLRNSLIALAAFAIAATFVSASSFAAEFTVHHGMRYRAILVLKSVEQLANNALIAQKFRDLGFSGVRVSGEGATRRVEGVWPGKDTSANMPPQIIVVAQL
Ga0247828_1096795213300028587SoilMTYTIRILLKVVGALAIATLVSPSFAGEFTVHNGKSYRATLSLNSVERLTDNALIARKFRALGFSKVRVSGAGAVRRVEGVWARKDASATLPRQIVA
Ga0247824_1039085213300028809SoilMTYTIRILLKVVGALAIATLVSPSFAGEFTVHNGKSYRATLSLNSVERLTDNALIARKFRALGFSKVRVSGAGAVRRVEGVWARKDASATLPRQIVAVARL
Ga0311348_1085212223300030019FenMTKKSRLNSMTALLAFVIATTFVSASSFAAQFTVHQGKRYHAILALTSVEQLAGNAQIAQKFRDLGFSRVRVSGAGTTRRVEGVWPGKDTSANMPPQIVAVAVSGG
Ga0307500_1001426033300031198SoilMTNKTFRILLKAIAAFAITAALGSASFAGDFTVREGKRYCATLALSPVEQLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKDASTTLPRQIVAVAGL
Ga0170824_12589938213300031231Forest SoilKNYRTSAMTNNTYRMLLKAITAFAITAAFGSASFAGDFTVHQGKRYCATLALNSVERLADNALIARKFRALGFSRVRVSGTGAMRRVEGVWFRKDASATLPRQIVAVDGL
Ga0170824_12836329423300031231Forest SoilMSNKTVRILLKAVAALALTATFGSASFAGEFTVHQGERYRAILALRSMERLVDNALIAQKFRDLGFAGVKVSGAGARRRVEGVWPGKDTSANMPPQIVAVAKL
Ga0302323_10097594823300031232FenMTKKSRLNSMTALSAFVIATTFVSASSFAAQFTVHQGKRYHAILALTSVEQLAGNAQIAQKFRDLGFSRVRVSGAGTTRRVEGVWPGKDTSANMPPQIVAVAVSGG
Ga0308194_1013520113300031421SoilMTNKIFRMLLKAIAAFAITASFGSASFAGDFTVREGKRYCATLALSPVEQLADNALIARKFRTLGFSSVRVSGTGAKRRVEGVWHRKDASTTLPRQIVAVAGL
Ga0170819_1052954623300031469Forest SoilMSNKTVRILLKAVAALAITATFGSASFAGEFTVHQGERYRAILALRSMERLVDNALIAQKFRDLGFAGVKVSGAGATRRIEGVWPGKVTSANMPPQIVAVAKL
Ga0170818_10080834423300031474Forest SoilMTNKTFRTLLKAIAAFAITVSFVNASFAGEITVREGKRYCATLALNSVERLADNALIARKFRALGFSGVRVSGTGAKRRVEGVWHRKDASTTLPRQIVAAAGL
Ga0310887_1038689623300031547SoilMTNKTFRTLLKAIAAFAITAAFGSASFAGDFTVREGKRYCATLALSPVEQLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKDASTTLPRQIVAVAGL
Ga0310886_1057382313300031562SoilKATAAFAITAAFGSASFAGDFTVREGKRYCATLALSPVEQLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKDASTTLPRQIVAVAGL
Ga0307469_1023446013300031720Hardwood Forest SoilMTNKTFRMLLKAIAAFAITAAFGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSKVRVSGAGAVRRVEGVWPRKDASATLPRQIVAVAGL
Ga0307469_1093838813300031720Hardwood Forest SoilMTNKTFCILLKTIAAFAITASFGSASFAGEFTIREGKRYCATLALNSVERLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKEASTTLPRQIVAVAGL
Ga0307468_10143310513300031740Hardwood Forest SoilRAMTNKTFRMLLKAIAAFAITAAFGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSKVRVSGAGAVRRVEGVWPRKDASATLPRQIVAVAGL
Ga0307473_1121528923300031820Hardwood Forest SoilMTKTFRILLKTIAAFAITASFGSASFAGEITIREGKRYCATLALNSVERLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKEASTTLPRQIVAVAGL
Ga0310885_1068878413300031943SoilMTNKTFRILLKAMAFAITAALGSASFAGDFTVREGKRYCATLALSPVEQLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKDASTTLPRQIVAVAGL
Ga0214473_1011513223300031949SoilMTNITVRTLVKTFAAFAIAVTFVSVTSFAGEFTVHPGKKYRATLSLSGVERMADNAMIARKFRALGFTSVRVSGAGEKRKVEGVWPGKPTSASLPRQIIAVAQL
Ga0306922_1018389313300032001SoilQDVRMTNKSICDLLKSLAAFVITASLSSASFAGEFTVHQGNLYRATLSLNSVERLADNALIARKFRALGFSNVRVSGTGTIRRVEGVWPRKDASAPLPPQIVAVAKL
Ga0310897_1050565123300032003SoilFRILPKAIAAFAITAALGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSRVRVSGTGAKRRVEGVWHLKDASTTLPRQIVAVAGL
Ga0310890_1004720033300032075SoilMTNKTFRTLLKAIAAFAITAAFGSASFAGDFTVREGKRYCATLALSPVEQLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKDASTTLPRRIVAVAGL
Ga0310895_1036672113300032122SoilFRILLKAMAFAITAALGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSKVRVSGAGAVRRVEGVWHRKDASTTLPRQIVAVAGL
Ga0307470_1019965823300032174Hardwood Forest SoilMTNKTFCISLKTIAAFAITASFASASFAGEITIREGKRYCATLALNSVERLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKDASTTLPRQIVAVARL
Ga0307471_10357123213300032180Hardwood Forest SoilNNFCILLKTIAAFAITASFGSASFAGEFTIREGKRYCATLALNSVERLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKDASTTLPRQIVAVAGL
Ga0307472_10186838313300032205Hardwood Forest SoilMTNTTFCMLLKAIAAFVITAAFASASFAGDFTVHQGKRYCATLALNSVERLADNALIARKFRALGFSRVRVSGTGAMRRAEGLWLRKDATAPLPHQIVEVAKL
Ga0307472_10222089013300032205Hardwood Forest SoilMTNTVRLLKAVAALAITATFGSASFAGDFTVREGKRYCATLALNSVERLADNALIARKFRALGFSRVRVSGAGAVRRVEGVWHRKDASATLPRQIVAVARL
Ga0310896_1057121923300032211SoilMTNKTFRMLLKAIAAFAITAAFGSASFAGDFTVREGKRYCATLALNSVEQLADNALIARKFRALGFSRVRVSGTGAMRRVEGVWHRKDASATLPRQIVAVAGL
Ga0335081_1096359723300032892SoilMTNKTLRNSLIALAAFPIAATFVIASSFAAEFTVHQGKRYQAILALKSVERLVDNALIAQKFRDLGFTGVRVSGAGAMRRVEGVWPGKDTSANMPPQIVAVAKL

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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