Metagenome / Metatranscriptome Family F042591

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042591
Family Type	Metagenome / Metatranscriptome
Number of Sequences	158
Average Sequence Length	64 residues
Representative Sequence	PLAEKYPANPLFQLARGDLYAKLGRKQQALACYRAASALPVQDPECQNHIQELVRVSIAALGPQ
Number of Associated Samples	125
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.10 %
% of genes from short scaffolds (< 2000 bps)	89.24 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.82

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.203 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (35.443 % of family members)
Environment Ontology (ENVO)	Unclassified (32.278 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.063 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.09% β-sheet: 0.00% Coil/Unstructured: 48.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.82
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.82
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SCOP family	SCOP domain	Representative PDB	TM-score
a.118.8.1: Tetratricopeptide repeat (TPR)	d3eska1	3esk	0.80825
a.118.1.30: FAT domain	d4jspa3	4jsp	0.78156
a.118.8.1: Tetratricopeptide repeat (TPR)	d1wm5a2	1wm5	0.77753
a.118.8.0: automated matches	d4kbqa_	4kbq	0.77308
a.118.8.9: TPR-like repeats from PCI (proteasome / COP9 signalosome / eIF3) domains	d4lcta1	4lct	0.77002

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF07676	PD40	8.23
PF01833	TIG	5.06
PF03320	FBPase_glpX	1.90
PF02719	Polysacc_synt_2	1.27
PF00781	DAGK_cat	0.63
PF13911	AhpC-TSA_2	0.63
PF06782	UPF0236	0.63
PF05016	ParE_toxin	0.63
PF14559	TPR_19	0.63
PF13490	zf-HC2	0.63
PF00246	Peptidase_M14	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG0451	Nucleoside-diphosphate-sugar epimerase	Cell wall/membrane/envelope biogenesis [M]	2.53
COG0702	Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains	General function prediction only [R]	2.53
COG1086	NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC	Cell wall/membrane/envelope biogenesis [M]	2.53
COG1494	Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase or related protein	Carbohydrate transport and metabolism [G]	1.90
COG1087	UDP-glucose 4-epimerase	Cell wall/membrane/envelope biogenesis [M]	1.27
COG1088	dTDP-D-glucose 4,6-dehydratase	Cell wall/membrane/envelope biogenesis [M]	1.27
COG1089	GDP-D-mannose dehydratase	Cell wall/membrane/envelope biogenesis [M]	1.27
COG1091	dTDP-4-dehydrorhamnose reductase	Cell wall/membrane/envelope biogenesis [M]	1.27
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	1.27

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.20 %
Unclassified	root	N/A	3.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.20 %
Unclassified	root	N/A	3.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.20 %
Unclassified	root	N/A	3.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	68.99 %
Unclassified	root	N/A	3.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	24.05 %
Unclassified	root	N/A	3.80 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.05 %
Unclassified	root	N/A	3.80 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.05 %
Unclassified	root	N/A	3.80 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.05 %
Unclassified	root	N/A	3.80 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	0.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.05 %
Unclassified	root	N/A	3.80 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	0.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1040439	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300002914\|JGI25617J43924_10023453	All Organisms → cellular organisms → Bacteria	2152	Open in IMG/M
3300002915\|JGI25387J43893_1037045	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300002917\|JGI25616J43925_10051778	All Organisms → cellular organisms → Bacteria	1775	Open in IMG/M
3300003224\|JGI26344J46810_1012274	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300003367\|JGI26338J50219_1001948	All Organisms → cellular organisms → Bacteria	1440	Open in IMG/M
3300004080\|Ga0062385_10438249	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300004080\|Ga0062385_11128499	Not Available	533	Open in IMG/M
3300004091\|Ga0062387_100008355	All Organisms → cellular organisms → Bacteria → Acidobacteria	3646	Open in IMG/M
3300004635\|Ga0062388_101982267	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300005180\|Ga0066685_10500503	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300005184\|Ga0066671_10071918	All Organisms → cellular organisms → Bacteria → Acidobacteria	1831	Open in IMG/M
3300005538\|Ga0070731_10227245	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300005554\|Ga0066661_10950908	Not Available	503	Open in IMG/M
3300005555\|Ga0066692_10259443	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300005586\|Ga0066691_10908405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300005602\|Ga0070762_10221161	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300005602\|Ga0070762_10225200	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300005602\|Ga0070762_10411988	All Organisms → cellular organisms → Bacteria → Acidobacteria	873	Open in IMG/M
3300005921\|Ga0070766_10561410	All Organisms → cellular organisms → Bacteria → Acidobacteria	764	Open in IMG/M
3300006163\|Ga0070715_10647067	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300006176\|Ga0070765_102310008	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300006797\|Ga0066659_10967120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300006797\|Ga0066659_11767261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300006800\|Ga0066660_10649571	All Organisms → cellular organisms → Bacteria → Acidobacteria	875	Open in IMG/M
3300006954\|Ga0079219_10802152	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300006954\|Ga0079219_11206949	All Organisms → cellular organisms → Bacteria → Proteobacteria	655	Open in IMG/M
3300007255\|Ga0099791_10510967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300007255\|Ga0099791_10589090	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300007265\|Ga0099794_10435584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300007265\|Ga0099794_10680398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300009088\|Ga0099830_10525533	All Organisms → cellular organisms → Bacteria → Acidobacteria	967	Open in IMG/M
3300009088\|Ga0099830_11644382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300009089\|Ga0099828_10645506	All Organisms → cellular organisms → Bacteria → Acidobacteria	952	Open in IMG/M
3300010301\|Ga0134070_10399050	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300010303\|Ga0134082_10000146	All Organisms → cellular organisms → Bacteria	21996	Open in IMG/M
3300010303\|Ga0134082_10236489	All Organisms → cellular organisms → Bacteria → Acidobacteria	754	Open in IMG/M
3300010320\|Ga0134109_10085883	All Organisms → cellular organisms → Bacteria → Acidobacteria	1082	Open in IMG/M
3300010325\|Ga0134064_10055837	All Organisms → cellular organisms → Bacteria → Acidobacteria	1219	Open in IMG/M
3300010329\|Ga0134111_10532992	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300010337\|Ga0134062_10117474	All Organisms → cellular organisms → Bacteria → Acidobacteria	1157	Open in IMG/M
3300010358\|Ga0126370_11100213	All Organisms → cellular organisms → Bacteria → Acidobacteria	732	Open in IMG/M
3300010360\|Ga0126372_12445784	Not Available	573	Open in IMG/M
3300010361\|Ga0126378_11498280	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300010364\|Ga0134066_10439175	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300011269\|Ga0137392_10152421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1866	Open in IMG/M
3300011269\|Ga0137392_10401319	All Organisms → cellular organisms → Bacteria → Acidobacteria	1138	Open in IMG/M
3300011270\|Ga0137391_10588260	All Organisms → cellular organisms → Bacteria → Acidobacteria	934	Open in IMG/M
3300011270\|Ga0137391_10712306	All Organisms → cellular organisms → Bacteria → Acidobacteria	833	Open in IMG/M
3300011270\|Ga0137391_11144134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300011271\|Ga0137393_11411199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300011271\|Ga0137393_11449319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300012096\|Ga0137389_10823496	All Organisms → cellular organisms → Bacteria → Acidobacteria	797	Open in IMG/M
3300012096\|Ga0137389_11034341	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300012096\|Ga0137389_11094453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300012096\|Ga0137389_11111219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300012189\|Ga0137388_11119678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300012189\|Ga0137388_11926902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300012198\|Ga0137364_10947217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300012200\|Ga0137382_10220490	All Organisms → cellular organisms → Bacteria → Acidobacteria	1308	Open in IMG/M
3300012200\|Ga0137382_10540308	All Organisms → cellular organisms → Bacteria → Acidobacteria	830	Open in IMG/M
3300012203\|Ga0137399_10047268	All Organisms → cellular organisms → Bacteria → Acidobacteria	3101	Open in IMG/M
3300012205\|Ga0137362_10258284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1505	Open in IMG/M
3300012205\|Ga0137362_11093396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300012210\|Ga0137378_10529543	All Organisms → cellular organisms → Bacteria → Acidobacteria	1086	Open in IMG/M
3300012285\|Ga0137370_10625767	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300012359\|Ga0137385_11315283	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300012362\|Ga0137361_10121006	All Organisms → cellular organisms → Bacteria	2306	Open in IMG/M
3300012362\|Ga0137361_11350698	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300012362\|Ga0137361_11721255	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300012363\|Ga0137390_10226043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1858	Open in IMG/M
3300012363\|Ga0137390_11702989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300012363\|Ga0137390_11799462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300012582\|Ga0137358_10210361	All Organisms → cellular organisms → Bacteria → Acidobacteria	1327	Open in IMG/M
3300012685\|Ga0137397_10732102	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300012918\|Ga0137396_10375296	All Organisms → cellular organisms → Bacteria → Acidobacteria	1053	Open in IMG/M
3300012918\|Ga0137396_11022699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300012918\|Ga0137396_11029913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300012922\|Ga0137394_11127002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300012922\|Ga0137394_11146093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300012923\|Ga0137359_10367208	All Organisms → cellular organisms → Bacteria → Acidobacteria	1279	Open in IMG/M
3300012925\|Ga0137419_10774963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300012925\|Ga0137419_11551571	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300012927\|Ga0137416_11892680	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300012976\|Ga0134076_10583237	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300012977\|Ga0134087_10005194	All Organisms → cellular organisms → Bacteria	4181	Open in IMG/M
3300014150\|Ga0134081_10348776	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300014157\|Ga0134078_10333913	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300015051\|Ga0137414_1247611	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2951	Open in IMG/M
3300015053\|Ga0137405_1109412	All Organisms → cellular organisms → Bacteria → Acidobacteria	1516	Open in IMG/M
3300015054\|Ga0137420_1090629	All Organisms → cellular organisms → Bacteria → Acidobacteria	1643	Open in IMG/M
3300015357\|Ga0134072_10080528	All Organisms → cellular organisms → Bacteria → Acidobacteria	966	Open in IMG/M
3300015357\|Ga0134072_10151103	All Organisms → cellular organisms → Bacteria → Acidobacteria	764	Open in IMG/M
3300017657\|Ga0134074_1139585	All Organisms → cellular organisms → Bacteria → Acidobacteria	844	Open in IMG/M
3300017822\|Ga0187802_10124535	All Organisms → cellular organisms → Bacteria → Acidobacteria	977	Open in IMG/M
3300017933\|Ga0187801_10070229	All Organisms → cellular organisms → Bacteria → Acidobacteria	1295	Open in IMG/M
3300017961\|Ga0187778_10520792	All Organisms → cellular organisms → Bacteria → Acidobacteria	791	Open in IMG/M
3300017966\|Ga0187776_10673532	All Organisms → cellular organisms → Bacteria → Acidobacteria	729	Open in IMG/M
3300017975\|Ga0187782_10743266	All Organisms → cellular organisms → Bacteria → Acidobacteria	757	Open in IMG/M
3300017995\|Ga0187816_10013947	All Organisms → cellular organisms → Bacteria → Acidobacteria	3043	Open in IMG/M
3300018012\|Ga0187810_10051806	All Organisms → cellular organisms → Bacteria → Acidobacteria	1550	Open in IMG/M
3300018088\|Ga0187771_11875567	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300018468\|Ga0066662_10860781	All Organisms → cellular organisms → Bacteria → Acidobacteria	886	Open in IMG/M
3300019360\|Ga0187894_10037765	All Organisms → cellular organisms → Bacteria	2999	Open in IMG/M
3300020170\|Ga0179594_10320721	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300020581\|Ga0210399_10153464	All Organisms → cellular organisms → Bacteria → Acidobacteria	1905	Open in IMG/M
3300020581\|Ga0210399_10694098	All Organisms → cellular organisms → Bacteria → Acidobacteria	837	Open in IMG/M
3300020581\|Ga0210399_10773865	All Organisms → cellular organisms → Bacteria → Acidobacteria	785	Open in IMG/M
3300020581\|Ga0210399_11379949	Not Available	551	Open in IMG/M
3300020583\|Ga0210401_10107698	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2617	Open in IMG/M
3300021168\|Ga0210406_10027444	All Organisms → cellular organisms → Bacteria	5189	Open in IMG/M
3300021170\|Ga0210400_10757043	All Organisms → cellular organisms → Bacteria → Acidobacteria	797	Open in IMG/M
3300021171\|Ga0210405_11327271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300021180\|Ga0210396_10252085	All Organisms → cellular organisms → Bacteria → Acidobacteria	1569	Open in IMG/M
3300021180\|Ga0210396_10844665	All Organisms → cellular organisms → Bacteria → Acidobacteria	783	Open in IMG/M
3300021407\|Ga0210383_10908551	All Organisms → cellular organisms → Bacteria → Acidobacteria	750	Open in IMG/M
3300021420\|Ga0210394_10546396	Not Available	1019	Open in IMG/M
3300021475\|Ga0210392_11148178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300021477\|Ga0210398_10360015	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300021478\|Ga0210402_11363467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300021479\|Ga0210410_10095990	All Organisms → cellular organisms → Bacteria → Acidobacteria	2615	Open in IMG/M
3300022509\|Ga0242649_1026234	All Organisms → cellular organisms → Bacteria → Acidobacteria	725	Open in IMG/M
3300022532\|Ga0242655_10053332	All Organisms → cellular organisms → Bacteria → Acidobacteria	1003	Open in IMG/M
3300024330\|Ga0137417_1243621	All Organisms → cellular organisms → Bacteria → Acidobacteria	1340	Open in IMG/M
3300025905\|Ga0207685_10442187	All Organisms → cellular organisms → Bacteria → Acidobacteria	674	Open in IMG/M
3300026312\|Ga0209153_1031828	All Organisms → cellular organisms → Bacteria → Acidobacteria	1806	Open in IMG/M
3300026332\|Ga0209803_1334598	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300026333\|Ga0209158_1060181	All Organisms → cellular organisms → Bacteria → Acidobacteria	1523	Open in IMG/M
3300026482\|Ga0257172_1092961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300026528\|Ga0209378_1102333	All Organisms → cellular organisms → Bacteria → Acidobacteria	1263	Open in IMG/M
3300026537\|Ga0209157_1053880	All Organisms → cellular organisms → Bacteria → Acidobacteria	2115	Open in IMG/M
3300026551\|Ga0209648_10629779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300027109\|Ga0208603_1074671	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300027174\|Ga0207948_1000331	All Organisms → cellular organisms → Bacteria → Acidobacteria	4287	Open in IMG/M
3300027587\|Ga0209220_1054438	All Organisms → cellular organisms → Bacteria → Acidobacteria	1067	Open in IMG/M
3300027605\|Ga0209329_1131827	Not Available	550	Open in IMG/M
3300027643\|Ga0209076_1193039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300027701\|Ga0209447_10163016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300027765\|Ga0209073_10236696	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300027842\|Ga0209580_10600584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300027846\|Ga0209180_10280407	All Organisms → cellular organisms → Bacteria → Acidobacteria	957	Open in IMG/M
3300027853\|Ga0209274_10290398	All Organisms → cellular organisms → Bacteria → Acidobacteria	839	Open in IMG/M
3300027855\|Ga0209693_10070959	All Organisms → cellular organisms → Bacteria → Acidobacteria	1718	Open in IMG/M
3300027862\|Ga0209701_10017394	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	4701	Open in IMG/M
3300027875\|Ga0209283_10368439	All Organisms → cellular organisms → Bacteria → Acidobacteria	940	Open in IMG/M
3300027889\|Ga0209380_10412548	All Organisms → cellular organisms → Bacteria → Acidobacteria	791	Open in IMG/M
3300027903\|Ga0209488_10826257	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300028577\|Ga0265318_10158619	All Organisms → cellular organisms → Bacteria → Acidobacteria	830	Open in IMG/M
3300028906\|Ga0308309_10095281	All Organisms → cellular organisms → Bacteria → Acidobacteria	2288	Open in IMG/M
3300029636\|Ga0222749_10722575	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300030596\|Ga0210278_1036201	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300030764\|Ga0265720_1003663	All Organisms → cellular organisms → Bacteria → Acidobacteria	830	Open in IMG/M
3300030940\|Ga0265740_1001977	All Organisms → cellular organisms → Bacteria → Acidobacteria	1378	Open in IMG/M
3300031718\|Ga0307474_10685960	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300031823\|Ga0307478_10014737	All Organisms → cellular organisms → Bacteria	5440	Open in IMG/M
3300031890\|Ga0306925_11120596	All Organisms → cellular organisms → Bacteria → Acidobacteria	794	Open in IMG/M
3300031962\|Ga0307479_10950100	All Organisms → cellular organisms → Bacteria → Acidobacteria	830	Open in IMG/M
3300031962\|Ga0307479_11290544	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.37%
Host-Associated	Host-Associated	0.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.41%
Aquatic	Environmental → Aquatic	6.96%
Plants	Host-Associated → Plants	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.77%
Freshwater	Environmental → Aquatic → Freshwater	6.96%
Cave	Environmental → Terrestrial → Cave	0.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.75%
Loam	Environmental → Terrestrial → Soil → Loam	9.49%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.53%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	49.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.23%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.43%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.53%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.53%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.27%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	35.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.29%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.23%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.70%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.53%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.53%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.27%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.63%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003224	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3	Environmental	Open in IMG/M
3300003367	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030596	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO085SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030764	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030940	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10404392	3300002557	Grasslands Soil	LARGDLYAKLGRKQQALACYRAASALPVQNPECQTRLHELVRASIASLGME*
JGI25617J43924_100234531	3300002914	Grasslands Soil	YAKLGRKQQALACYRIASALPVRNAECQTHVQELARASIAALGMKNEGGDH*
JGI25387J43893_10370451	3300002915	Grasslands Soil	GPLAEKYPGNPLFQLARGDLYRKLGRKQQAAACYRAASALPVQDGECLRHVQELVRASLAALGAE*
JGI25616J43925_100517783	3300002917	Grasslands Soil	ARGDLYAKLGRKQQALACYRVASALPLQDAECQTRVHDLVRASIAALGAQ*
JGI26344J46810_10122742	3300003224	Bog Forest Soil	LAVIAPLVEKYPTNPLFQFAQGDLYAKLARKEQALACYRAASALSFQDSECRAHLQELLKAAIAAQAIPSSPGTH*
JGI26338J50219_10019482	3300003367	Bog Forest Soil	RALAVIAPLVEKYPTNPLFQFAQGDLYAKLARKEQALACYRAASALSFQDSECRAHLQELLKAAIAAQAIPSSPGTH*
Ga0062385_104382492	3300004080	Bog Forest Soil	GPLVERYPTNPLFQLAQGDLYAKLSRKERALACYRAATALPVQDAECRTRIQELARAAIAAEGLTEPPV*
Ga0062385_111284992	3300004080	Bog Forest Soil	YAKLSRKEQALACYHAAAALSVQDAECRAHIHELVLASLAAQGVGNSSATH*
Ga0062387_1000083554	3300004091	Bog Forest Soil	DLYAKLGRREQAIACYRAAAALHVQDAECRAHIQELVLASLAAQGVGSTSATR*
Ga0062388_1019822672	3300004635	Bog Forest Soil	FQLARGDLYAKLGRKEQALACYRAAAALPVQDAECHANIQGLVRASLAAQGIVQSSGTP*
Ga0066685_105005031	3300005180	Soil	NPLFQLARGDLYAKLGRKQQALACYRAASALPVQDAECQNHIHELARVSIAALGSQ*
Ga0066671_100719182	3300005184	Soil	QLVRGDLYAKLGRKPQALQCYSAAADLSVRDSECQARIRQLVRASIAALGLQQEPAAP*
Ga0070731_102272451	3300005538	Surface Soil	EKALSVIIPLADKYPSNPLFQLSRGDLYAKLGRKEQALVNYRAAASLTVRDPECRSHIQELARASIAAQGQAVDATASISH*
Ga0066661_109509081	3300005554	Soil	KLGRKQQALACYRAASALPVQNPECQTRVHELVRASIAALGTE*
Ga0066692_102594431	3300005555	Soil	LGPLAEKYPTNPLFQLARGDLYAKLGRKQQALACYRAASALPVQDAECQNHIHELARVSIAALGSQ*
Ga0066691_109084051	3300005586	Soil	PANPLFQLARGDLFAKLGRKQQALACYRAVSALPVQNAECQAHVRDLARASIASLGVQ*
Ga0070762_102211612	3300005602	Soil	YPSNPLFQLARGDLYAKLSRKEQALACYRAAAALTVQDAECHTHIQELVRASLAAQGVGNSSATH*
Ga0070762_102252001	3300005602	Soil	ALGIITPLVEKYPSNPIFQLARGDLYARLGHKKQAVDGYLAAAALAVQDAECRTRIEQLVSASLAAQGITDSSATH*
Ga0070762_104119881	3300005602	Soil	ARGDLYAKLGRKERAVACYRAAASLPVEDGACRARIQELVRASLAAQGLADHSATH*
Ga0070766_105614101	3300005921	Soil	GVIGPLVEQYPSNPLFQLVRGDLYAKLGRKERAVACYRAAASLPVQDAECRARIQELVRASLAAQGLVNQSATH*
Ga0070715_106470671	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	QLARGDLYAKVGRKEQALACYRAAGSLRIQDAECRTRIQDLVSASLAAQSVGENSASH*
Ga0070765_1023100082	3300006176	Soil	ALAVIGPLVGKYPSNPLFQLARGDLYAKLARKEQAIACYRAAAAVPVQDTECRNHIRELALASLAAQGAVDSPATH*
Ga0066659_109671201	3300006797	Soil	YEKALKVLGPLAEKYPGNPLFQLALGDLYAKLGRKRQALACYRRASALPVQNVECRARVQDLARASIAALGAE*
Ga0066659_117672611	3300006797	Soil	KYPANPLFQLARGDLYAKLGRKQQALACYYAANALPVQDAECQSHIHELVRVSIAALGSQ
Ga0066660_106495711	3300006800	Soil	YPSNPLFQLARGDLLAKLGRKPQASECYRAAAVLPVHEPECQARIQQLARAAISALGLPQEPAAP*
Ga0079219_108021521	3300006954	Agricultural Soil	GDLYAKLGRKQQALAAYRAASALPVHDPECLTHIQVLARASIAALNPQ*
Ga0079219_112069491	3300006954	Agricultural Soil	LGPLAEKYQANPLFQLARGDLYAKLGRKQQAIVCYRAASALPVQDAECQKHIQELVRASLTALGPE*
Ga0099791_105109671	3300007255	Vadose Zone Soil	KYPTNPLFQLARGDLCAKLGRKQQALACYRAAGAAAVQNVECQSHLRELVRASIAALGPQ
Ga0099791_105890901	3300007255	Vadose Zone Soil	ANPLFQLARGDLYAKLGRKERALACYRAAGALVVPDTECQTRVRQLVRVSIEALGISSTSDTH*
Ga0099794_104355842	3300007265	Vadose Zone Soil	ALGVVGPLAEKYPANPLFQLARGDLYAKLGRKELALACYRAAGALAVPDAECQVRVRELVRLSIEALGATKGR*
Ga0099794_106803982	3300007265	Vadose Zone Soil	LFQLARGDLYAKLGRKQQALACYRTASALQVQSAECQSHVQDLVRSSIAALGPQ*
Ga0099830_105255332	3300009088	Vadose Zone Soil	VEKYPTNPLFQLARGDLYAKLGRKQQALACYRTASALQVQSAECQSHVQDLVRSSIAALGPQ*
Ga0099830_116443821	3300009088	Vadose Zone Soil	VEKYPTNPLFQLARGDLYAKLGRKQQALACYRTASALQVQNAECQSHVQDLVRASIAALGPQ*
Ga0099828_106455062	3300009089	Vadose Zone Soil	NPLFQLARGDLYAKLGRKQQALACYRAASASAVRDVDCQTRVKELVRASIAALGAQ*
Ga0134070_103990501	3300010301	Grasslands Soil	KPLFQLASGDLFAKLGRKQHALQCYRAAAALPVRDPECQAHIQQLARTSIAALGLQQEPAAS*
Ga0134082_1000014621	3300010303	Grasslands Soil	ALTIISPLAEKYPSNPLFQLVRGDLYAKLGRKPQALQCYSAAADLSVRDSECQARIRQLVRASIAALGLQQEPAAP*
Ga0134082_102364891	3300010303	Grasslands Soil	ARGDLYAKLGRKQQALACYRAASALPAQDAECQNHIHELARVSIAALGSQ*
Ga0134109_100858832	3300010320	Grasslands Soil	FQLARGDLYAKLGRKLQAMVCYRAASALPVQDAECQKHIQELVRASLAALGPE*
Ga0134064_100558372	3300010325	Grasslands Soil	PANPLFQLARGDLYAKLGRKLQAMVCYRAASALPVQDAECQKHIQELVRASLAALGPE*
Ga0134111_105329921	3300010329	Grasslands Soil	LTLISPLAEKYPSNPLFQLARGDLFAKLGRKQYALQCYRAAAALPVRDPECQAHIQQLARTSIAALGLQQEPAAS*
Ga0134062_101174742	3300010337	Grasslands Soil	LFQLARGDLYAKLGRKQQALACYRAASAWPVQDAECQNHIHELARVSIVALGSQ*
Ga0126370_111002131	3300010358	Tropical Forest Soil	SNPLFQLARGDLLAKLGRKQQALLSYRAAAALQVRDTNCQSRIQQLVRASIGVLGLPQEAASR*
Ga0126372_124457842	3300010360	Tropical Forest Soil	QLIRGDLYAKLGRKERAAECYRAAAALPVNNPDCRRHVRELARASLAAIGIAPAE*
Ga0126378_114982801	3300010361	Tropical Forest Soil	EKYPSNPLFQLARADLFAKLGRKQQASASYRAAAALTVREAECHAHIQQLVRAAITALGSPQESASP*
Ga0134066_104391752	3300010364	Grasslands Soil	APLVEKYPANPLFQLARGDLLAKLGRKQQAAESYRAAGTLPVQDPECRTRVQALVRASLAALGPTPD*
Ga0137392_101524212	3300011269	Vadose Zone Soil	ANPLFQLARGDLYAKLGRKQQALACYRAASALPVQSAECQAHVRDLVRASIASLGVQ*
Ga0137392_104013191	3300011269	Vadose Zone Soil	RGDLYAKLGRKQQALACYRAASALPVHCAECQAHVRELVRASIASLGVQ*
Ga0137391_105882602	3300011270	Vadose Zone Soil	PLAEKYPANPLFQLARGDLYAKLGRKEKALACYRAAGALAVPDAECQSRVRDLVRVSIEALGRSSGH*
Ga0137391_107123062	3300011270	Vadose Zone Soil	YEKALAVLTPLVEKYPANPLFQLARGDLNAKLGRKQQALACYHAASALPLQDAECQTHVQELARASIAALGAQ*
Ga0137391_111441342	3300011270	Vadose Zone Soil	LFQLARGDLYAKLGRKQQALACYRAASASAVRDVDCQTRVQELVRASIATLGAQ*
Ga0137393_114111991	3300011271	Vadose Zone Soil	RGDLYAKLGRKQQALACYRAASALPVQSAECQAHVRDLVRASIASLGVQ*
Ga0137393_114493191	3300011271	Vadose Zone Soil	ARGDLYAKLGRKQQALACYRAASASAVRDVDCQTRVQELVRASIATLGAQ*
Ga0137389_108234961	3300012096	Vadose Zone Soil	ALNVLSPLVEKYPANPLFQLARGDLYAKLGRKQQALACYRAASALPVQNAECQSRVQELVRASIAALGAQ*
Ga0137389_110343411	3300012096	Vadose Zone Soil	NPLFQLARGDLYAKLGRKQQALACYRAASASPVQDAECQTRVRELVRASIAALGMKNESEDH*
Ga0137389_110944531	3300012096	Vadose Zone Soil	KALRVLAPLVEKYPGNPLFQLARGDLYAKLGRKQQASASYRAASAAAVQNEECQSHVRELVRTSIAALGAQ*
Ga0137389_111112192	3300012096	Vadose Zone Soil	EKALNVLSPLVEKYPTNPLFQLARGDLYAKLGRKPQALASYRAASALQVQNAECQTRVLDLVRASIAALGGQ*
Ga0137388_111196781	3300012189	Vadose Zone Soil	ALNVLSPLVEKYPTNPLFQLARGDLYAKLGRKQQALACYRTASALQVQSAECQSHVQDLVRSSIAALGPQ*
Ga0137388_119269021	3300012189	Vadose Zone Soil	NPLFQLARGDLYAKLGRKELALACYRAAGALAVPDAECQVRVRELVRLSIEALGATKGR*
Ga0137364_109472172	3300012198	Vadose Zone Soil	FQLARGDLYAKLGRKQQALACYRAASAWPVQDAECQNHIHELARVSIAALGSQ*
Ga0137382_102204902	3300012200	Vadose Zone Soil	YERALTLISPLAEKYPSNPLFQLARGDLFAKLGRKQHALQCYRAAAALPVRDPECQARIQQLARTSIAALGLQQEPAAS*
Ga0137382_105403082	3300012200	Vadose Zone Soil	FQLARGDLYAKLGRKQQALACYRAASALPVQNPECQTRLHELVRASIASLGRE*
Ga0137399_100472681	3300012203	Vadose Zone Soil	QALGVLVPLVEKYPANPLFQLARGDLYAKLGRKQQALATYRVAAALPIQDSDCQSHLQNLVRASIAALGLP*
Ga0137362_102582841	3300012205	Vadose Zone Soil	KYPTNPLFQLARGDLYAKLGRKQQALACYRAAGALQVQDAECQFHVRELVRAPVAALGAQH*
Ga0137362_110933962	3300012205	Vadose Zone Soil	PLAEKYPANPLFQLARGDLYAKLGRKQQALACYRAASALPVQDPECQNHIQELVRVSIAALGPQ*
Ga0137378_105295431	3300012210	Vadose Zone Soil	KALNILGPLAEKYPGNPLFQLARGDLYAKLGRKQQAAACYRAASALPVQDGECRSHVQELVRQAVAALGAE*
Ga0137370_106257672	3300012285	Vadose Zone Soil	QYEKALNILGPLAVKYPGNPLFQLARGDLYAKLGRKQQAAACYRAASALPVQDGECLSHVQELVRASVAALGAE*
Ga0137385_113152831	3300012359	Vadose Zone Soil	PLAEKYPSNPLFQLARGDLLAKLGRKPQAFECYRAAAVLPVHEPECQSRIQQLARASIAALRLPQEPAGP*
Ga0137361_101210063	3300012362	Vadose Zone Soil	QYQKALDILGPLVEKYPTNPFFQLARGDLDAKLGRKRQALEAYRAAAALRVQSAECHARVQQLARASVAALGPP*
Ga0137361_113506982	3300012362	Vadose Zone Soil	FQLARGDLYAKLGRKELALACYRAAGALAVPDAECQVRVRELVRLSIEALSATKGR*
Ga0137361_117212551	3300012362	Vadose Zone Soil	QYQKALDILGPLVEKYPTNPFFQLARGDLDAKLGRKRQALEPYRAAAALPVQSEECHARIQQLVRASVAALGPP*
Ga0137390_102260431	3300012363	Vadose Zone Soil	KYPANPLFQLARGDLYAKLGRKQQALACYRAASALPVQSAECQAHVRDLVRASIASLGVQ
Ga0137390_117029891	3300012363	Vadose Zone Soil	RGDLYAKLGRKQQALACYRAASALPVQSAECQAHVRDLVRASVASLGVQ*
Ga0137390_117994621	3300012363	Vadose Zone Soil	ANPLFQLARGDLYAKLGRKQQASASYRAASVAAVQNEECRSHVRELVRTSIAALGAQ*
Ga0137358_102103612	3300012582	Vadose Zone Soil	PANPLFQLARGDLYAKLGRKELALACYRAAGALAVPDAECQVRIRELVRLSIEALSATKGR*
Ga0137397_107321021	3300012685	Vadose Zone Soil	VLGPLVEKYPANPLFQLARGDLYAKLGRKLQALACYRAASASPVQDAECQSRVQELVRASIASLGTE*
Ga0137396_103752961	3300012918	Vadose Zone Soil	QQYEKALSVISPLAEKYPANPLFQLARGDLYAKLGRKEKALACYRAAGALAVPDAECQSRVRDLVRVSIEALGRSSGH*
Ga0137396_110226991	3300012918	Vadose Zone Soil	YEKALAVLTPLVEKYPANPLFQLARGDLNAKLGRKQQALACYHAASALPLQDAECQTHVQELARASIAALGTQ*
Ga0137396_110299132	3300012918	Vadose Zone Soil	LYAKLGRKQQASASYRAASALPVQDGECQRHVQELVRASVAALGAE*
Ga0137394_111270021	3300012922	Vadose Zone Soil	PANPLFQLARGDLYAKLGRKERALACYRAAGALVVPDTECQTRVRQLVRVSIEALGISSTSDNH*
Ga0137394_111460932	3300012922	Vadose Zone Soil	FQLARGDLYAKLGRKELALACYRAAGALAVPDAECQVRVRELVRLSIEALGATKGR*
Ga0137359_103672081	3300012923	Vadose Zone Soil	SPLAEKYPANPLLQLARGDLYAKLGRKEQALACYRAAGALAVPDAECQSRVRELVRVSIEALGTTKGH*
Ga0137419_107749631	3300012925	Vadose Zone Soil	FQLARGDLYAKLGRKQQALACYRAASALPVQNPECQNRVHELVRASIAALGTE*
Ga0137419_115515711	3300012925	Vadose Zone Soil	LFQLARGDLYAKLGRKQQALACYRAASASPVQNPECQTRVQQLVRASIASLGTE*
Ga0137416_118926802	3300012927	Vadose Zone Soil	VEKYPANPIFQLALGDLYAKLGRKRQALACYRAAGLSPVQNAECHARIQELVRASIAALGAE*
Ga0134076_105832371	3300012976	Grasslands Soil	KYPGNPLFQLACGDLYAKLGRKQQALARYRAASALPVHNGECRARVQELVRASIAALGAK
Ga0134087_100051941	3300012977	Grasslands Soil	LARGDLYAKLGRKLQAMVCYRAASALPVQDAECQKHIQELVRASLAALGPE*
Ga0134081_103487761	3300014150	Grasslands Soil	LAEKYPTNPIFQLARGDLYAKLGRKPQALVCYRAAGALTVQHQECQARILQLVRVSIAALGLQQEPAAP*
Ga0134078_103339132	3300014157	Grasslands Soil	DQQYERALTIISPLAEKYPSNPLFQLARGDLLAKLGRKPQASECYRAAAVLPVHEPECQARIQQLARAAISALGLPQEPAAP*
Ga0137414_12476114	3300015051	Vadose Zone Soil	MKRRSTSLGPLVEKYPANPLFQLARGDLYAKLGRKQQALAGYRAASALPVQNPECQTRLHELVRASIASLGAE*
Ga0137405_11094121	3300015053	Vadose Zone Soil	LARGDLYAKLGRKERALACYRAAGALGVPDAECQVRIRELVRVSIEALGISSTSGNH*
Ga0137420_10906292	3300015054	Vadose Zone Soil	QYEQALGVLVPLVEKYPANPLFQLARGDLYAKLGRKQQALASYRVAAALPIQDSDCQSHLQNLVRASIAALGLP*
Ga0134072_100805282	3300015357	Grasslands Soil	ALNTISPLAEKYPTNPIFQLARGDLYAKLGRKPQALVCYRAAGALTVQHQECQARIQQLVRVSIAALGLQQEPAAP*
Ga0134072_101511032	3300015357	Grasslands Soil	LAEKYPSNPLFQLARGDLLAKLGRKPQASECYRAAAVLPVHEPECQARIQQLARAAISALGLPQEPAAP*
Ga0134074_11395851	3300017657	Grasslands Soil	KYPSNPLFQLARGDLFAKLGRKQHALQCYRAAAALPVRDPECQARIQQLARTSIAALGLQQEPAAS
Ga0187802_101245351	3300017822	Freshwater Sediment	LQYEKALAMIDPLADKYPTNPLFQLARGDLYAKLGRKQQALGSYRAAGALTIPNAKCQARVQELVRVSIAALGPQ
Ga0187801_100702291	3300017933	Freshwater Sediment	KYPTNPLFQLARGDLYAKLGRKQQALGSYRAAGALAIPNTKCQARVQELVRVSIAALGPQ
Ga0187778_105207922	3300017961	Tropical Peatland	SNPLFQLARGDLYGKLGRTEQALVCYRAAAALESKVQDDECRTHLRQLVRASLAAHGITEKSHPH
Ga0187776_106735321	3300017966	Tropical Peatland	PLTETYPSNPLFQLARGDLFAKLGRKEQALQCYRAAGAAAVQDPECEARIQQLVRTSISALSLPQT
Ga0187782_107432661	3300017975	Tropical Peatland	QLACGDLYGKLGRKTQALASYRAAGALTVSNAKCQARIQELVRVSQSALGAP
Ga0187816_100139471	3300017995	Freshwater Sediment	YPMNPLFQLARGDLYAKLGRKQQALGSYRAAGALAIPNTKCQARVQELVRVSIAALGPP
Ga0187810_100518062	3300018012	Freshwater Sediment	PTNPLFHLARGDLYAKLGRKQQALGSYRAAGALTIPNAKCQARVQELVRVSIAALGPP
Ga0187771_118755671	3300018088	Tropical Peatland	QQYERALTIITPLAEQYPSNPLFQLARGDLFAKLGRKEQALLCYRAASASAIPDQDCQSRIRQLVQSSIAALSSSQKTGTL
Ga0066662_108607811	3300018468	Grasslands Soil	LAEKYPANPLFQLARGDLYAKLGRKQQALACYRAASAWPVQDAECQNHIHELARVSIAALGSQ
Ga0187894_100377651	3300019360	Microbial Mat On Rocks	AMGDLNAKLNRKEKAAAYYRAAAALPLRDAACRARMQSLVRASLAALGPPFAEAGN
Ga0179594_103207211	3300020170	Vadose Zone Soil	LARGDLYAKLGRKLQALACYRAASASPVQDAECQSRVQELVRASIASLGTE
Ga0210399_101534641	3300020581	Soil	DLYAKLGHKEQALACYRAAAALPVQNGECRVRIQELARASLASQSVANSSATH
Ga0210399_106940982	3300020581	Soil	EQYPSNPLFQLARGDLYAKLGRKERAVACYQAAASLPVQDAECRARIQELVRASLAAQGLANHSATH
Ga0210399_107738652	3300020581	Soil	YPSNPLFQLARGDLYAKLGRKERAVACYQAAASIPVQDAECRARIQELARASLAAQGLANHSATR
Ga0210399_113799491	3300020581	Soil	DLYAKLGRKERAVACYRAAASLPVQDAECRARIQELVRASLAAQGLADHSATH
Ga0210401_101076981	3300020583	Soil	IGPLAEKYPSNPLFQLARGDLYAKLGRKAQALVCYRTAAALPVQDAACQTRIHELVRASLAAQGLANDSGTR
Ga0210406_100274445	3300021168	Soil	ARGDLYAKLGRKAQALMCYRTAAALPVQDAACRTRIQELVRASLAAQGIASDSGTR
Ga0210400_107570432	3300021170	Soil	GPLAEKYPANPIFQLALGDLYVKLGRKEEALVCYRAVTSLKVQDAQCQARIQELARVSIEALSASGKSSDH
Ga0210405_113272711	3300021171	Soil	LFQLARGDLYAKLGRKQQALACYRAAGALPVQDSECQSHLQNLVRASIAALGLP
Ga0210396_102520852	3300021180	Soil	LVEKYPSNPLFQLARGDLYAKLSRKEQALACYRAAAALTVQDAECRTHILELVRASLAAQGVGNSSATH
Ga0210396_108446652	3300021180	Soil	RGDLYAKLGHKKQAVDCYLAAAALPVPDAECRGHIERLVTASLAAQGIVDSSATH
Ga0210383_109085511	3300021407	Soil	VIGPLVEKYPSNPLFQLARGDLYAKLSRKEQALACYRAAEALPVQDAECRARIHELVLASLAALGVGNPSATH
Ga0210394_105463962	3300021420	Soil	LARGDLYAKLGRKERALVCYRAASAAKIQDAECQSRVRELVRVSIATLGAGDSAH
Ga0210392_111481782	3300021475	Soil	ALTVISPLAEKYPENPLFQLARGDLYAKLGRKDKALVCYRAAGTAKIQDTEFEKHVRELVRVSIAALGAGTDKDTGR
Ga0210398_103600151	3300021477	Soil	LFQLARGDLYAKLGRKDKALVCYRAAGTAKIQDAECEKHVRELVRVSIASLGGSVSEDNH
Ga0210402_113634672	3300021478	Soil	KYPSNPIFQLARGDLYAKLGRKQLALASYRAATAFPVQNAECQAHIQDLARASIAALGLQ
Ga0210410_100959901	3300021479	Soil	VEKYPSNPLFQLARGDLYAKLGRKEQALACYRAATAVPVQNGECRVRIQELARASLAAQGVADSSATH
Ga0242649_10262342	3300022509	Soil	GDLYAKLGHKKQAVDCYLAAAALPVPDAECRGHIERLVTASLAAQGIVDSSATH
Ga0242655_100533322	3300022532	Soil	VEQYPSNPLFQLARGDLYAKLGRKERAVACYRAAASLPVQDAECRARIQELVRVSLAAQGLADHSATH
Ga0137417_12436212	3300024330	Vadose Zone Soil	QYEKALRVISPLAEKYPANPLFQLARGDLYAKLGRKEKALACYRAAGALAVPDAECQSRVRDLVRVSIEALGRSSGH
Ga0207685_104421871	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	QLARGDLYAKVGRKEQALACYRAAGSLRIQDAECRTRIQDLVSASLAAQSVGENSASH
Ga0209153_10318282	3300026312	Soil	QLVRGDLYAKLGRKPQALQCYSAAADLSVRDSECQARIRQLVRASIAALGLQQEPAAP
Ga0209803_13345981	3300026332	Soil	RALAVIDPLTEQYPANPLFQLARGDLLAKLGRKQQALLCYRAASAAPLRDSECQARILQLVRASITALGLQQEPGTP
Ga0209158_10601812	3300026333	Soil	YEKALRVISPLAEKYPANPLFQLARGDLYAKLGRKELALACYRAAGALAVPDAECQVRVRELVRLSIEALSATKGR
Ga0257172_10929611	3300026482	Soil	VISPLAEKYPGNPLFQLARGDLYAKLGRKEKALAGYRAAGALAVPDAECQSRVRELVRVSIEALGASSGH
Ga0209378_11023332	3300026528	Soil	DQQYEKALNVLGPLAEKYPANPLFQLARGDLYAKLGRKQQALACYRAASALPVQDAECQNHIHELARVSIAALGSQ
Ga0209157_10538801	3300026537	Soil	ALTIISPLAEKYPSNPLFQLARGDLLAKLGRKPQASECYRAAAVLPVHEPECQARIQQLARAAISALGLPQEPAAP
Ga0209648_106297791	3300026551	Grasslands Soil	KALTVLGPLVEKYPANPLFQLARGDLYAKLGRKQQALACYRIASALPVQNAECQTHVQELVRPSIAALGMKNESGDH
Ga0208603_10746711	3300027109	Forest Soil	VIGPLVEQYPSNPLFQLARGDLYAKLGRKERAVACYRAAASLPVQDAECRARIQELVRASLAAQGLANHSAAH
Ga0207948_10003311	3300027174	Forest Soil	AKALAVISPLVEKYPSNPLFQLARGDLYAKLNRNEQALACYRAAAALPVQDAECRTHIQELVRSSLAAQGVGNSSATH
Ga0209220_10544381	3300027587	Forest Soil	NVLGPLVEKYPANPLFQLARGDLYAKLGRKHQALACYRAASASPVYNAECQTRVQELVRASTAALGEQ
Ga0209329_11318271	3300027605	Forest Soil	QLARGDLYAKLGRKEQALACYRAAATLPVQDAACRARIQELVRASLAAQGIADNSGTD
Ga0209076_11930391	3300027643	Vadose Zone Soil	EKALDVLGPLVEKFPANPLFQLARGDLYAKLGRKQQALACYRAASALPVQDSECQTRVHELVRASIAALGTE
Ga0209447_101630161	3300027701	Bog Forest Soil	EKALTVIGPLVEKYPSNPLFQLARGDLYAKLSRKEQALACYHAAAALSVQDAECRAHIHELVLASLAAQGVGNSSATH
Ga0209073_102366961	3300027765	Agricultural Soil	IISPLAEKYPSNPLFQLVRGDLYAKLGRKQQALLCYRAAAALSVADPECQARIQLLVRASIKALGVQPEPAAP
Ga0209580_106005841	3300027842	Surface Soil	PLVEKFPSNPLFQLARGDLLAKLGRKEQALECYRAAEGIIVRDPECAARIQALVRASLAALGLSTISPAP
Ga0209180_102804072	3300027846	Vadose Zone Soil	LVEKYPTNPLFQLARGDLYAKLGRKQQALACYRTASALQVQSAECQSHVQDLVRSSIAALGPQ
Ga0209274_102903982	3300027853	Soil	VEKYPSNPLFQLARGDLYAKLGHKKQAVDCYLAAAALPVPDAECRAHIERLVSASLAAQGIVDSSATH
Ga0209693_100709592	3300027855	Soil	ALGVIGPLVEQYPSNPLFQLARGDLYAKLGRKERAVACYRAAASLAVQDAECRARIQELVRASLAAQGLASHSATH
Ga0209701_100173945	3300027862	Vadose Zone Soil	GDLYAKLGRKQQALACYRAASALPVQSAECQAHVRELVRASIASLGVQ
Ga0209283_103684391	3300027875	Vadose Zone Soil	VLGPLAEKYPTNPLFQLARGDLYAKLGRKQQALACYRAASASAVRDVDCQTRVKELVRASIAALGAQ
Ga0209380_104125482	3300027889	Soil	EKALGVIGPLVEQYPSNPLFQLVRGDLYAKLGRKERAVACYRAAASLPVQDAECRARIQELVRASLAAQGLVNQSATH
Ga0209488_108262571	3300027903	Vadose Zone Soil	ALTIIGPLAEKYPSNPLFQLARGDLYAKLGRKQPALLCYRAAAALQVRDLECQARIQQLARTSIAALALQQEPTAP
Ga0265318_101586192	3300028577	Rhizosphere	LVEKYPSNPLFQLARGDLYAKLARKEQALACYRAAAAAPVLDAECRARVHDLVRASLAAQGVADPSVTH
Ga0308309_100952813	3300028906	Soil	EKALRAIGPLVEKYPSNPLFQLARGDLYAKLGRKEQALACYRAVAAVLVQDAECRAHIQELARAALAAQGVVDPSGTR
Ga0222749_107225751	3300029636	Soil	PSNPLFQLARGDLYGKLGRKARALACYHAAAALPIRDAECRARIQELVVASVAAQGAADTSGTR
Ga0210278_10362011	3300030596	Soil	RGDLYAKLGRKERAVACYRAAASLAVQDAECRARIQELVRASLAAQGLANHSATR
Ga0265720_10036631	3300030764	Soil	EKYPTNPLFQLARGDLYAKLGRREQALACYRAAAALHVQDAECRSHIQELVLASLAAQGVGASATH
Ga0265740_10019772	3300030940	Soil	ARGDLHAKLGRREQALACYRAAAALHVEDAECRAHIQELVLASLAAQGVSGTSATH
Ga0307474_106859602	3300031718	Hardwood Forest Soil	KLGRKERAVACYRAAAALPVQDAECRTRIQELVRASLAAQGLANP
Ga0307478_100147371	3300031823	Hardwood Forest Soil	RALAIIGPLVDKYPSNPLFQLARGDLYAKISRKAQALACYRAAAAAPIQDDECRVRIKELVRASLDAQGSVDSPANH
Ga0306925_111205962	3300031890	Soil	IISPLAEKYPSNPLFQLARGDLFAKLDRKAQALECYRAAATLPVREPQCQARIQQLARASISALGLPQEPAAP
Ga0307479_109501001	3300031962	Hardwood Forest Soil	ALRIIGPLVEKYPSNPLFQLALGDLHGKLGRKARAVACYRAAAVLHIQDAECRARIQELVIASLAAQGVADASGTH
Ga0307479_112905442	3300031962	Hardwood Forest Soil	LAVLTPLVEKYPANPLFQLARGDLYAKLGRKQQALACYRAASALPLLDVECRTHVQELARASIAALGMKNESADR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042591

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences