NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F042602

Metagenome / Metatranscriptome Family F042602

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F042602
Family Type Metagenome / Metatranscriptome
Number of Sequences 158
Average Sequence Length 82 residues
Representative Sequence VSDRLFAFRWDVDHRVCVTDGLPRIRAVCRDFGVPNTFFVNMGRSTNLREWIGKGVTRSKAKLADREAVHLIKKTGW
Number of Associated Samples 129
Number of Associated Scaffolds 158

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 91.77 %
% of genes near scaffold ends (potentially truncated) 99.37 %
% of genes from short scaffolds (< 2000 bps) 93.67 %
Associated GOLD sequencing projects 126
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(20.886 % of family members)
Environment Ontology (ENVO) Unclassified
(26.582 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(32.911 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.00%    β-sheet: 1.90%    Coil/Unstructured: 58.10%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 158 Family Scaffolds
PF00534Glycos_transf_1 69.62
PF13579Glyco_trans_4_4 9.49
PF13439Glyco_transf_4 6.96
PF13524Glyco_trans_1_2 5.06
PF00072Response_reg 3.16
PF01266DAO 1.90
PF14417MEDS 0.63
PF00749tRNA-synt_1c 0.63
PF12840HTH_20 0.63

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 158 Family Scaffolds
COG0008Glutamyl- or glutaminyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.63

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_104454832All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300000956|JGI10216J12902_112119199All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium732Open in IMG/M
3300002568|C688J35102_117919632All Organisms → cellular organisms → Bacteria → Proteobacteria515Open in IMG/M
3300003324|soilH2_10146730All Organisms → cellular organisms → Bacteria2432Open in IMG/M
3300003324|soilH2_10146731All Organisms → cellular organisms → Bacteria1078Open in IMG/M
3300003992|Ga0055470_10210118All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300003994|Ga0055435_10081851All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria830Open in IMG/M
3300004463|Ga0063356_104569998All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria595Open in IMG/M
3300005186|Ga0066676_10863172All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria609Open in IMG/M
3300005332|Ga0066388_101126273All Organisms → cellular organisms → Bacteria1332Open in IMG/M
3300005332|Ga0066388_103931987All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium758Open in IMG/M
3300005337|Ga0070682_101912651All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300005339|Ga0070660_100402420All Organisms → cellular organisms → Bacteria1132Open in IMG/M
3300005436|Ga0070713_102314076All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300005439|Ga0070711_101682967All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria556Open in IMG/M
3300005455|Ga0070663_100534621All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria978Open in IMG/M
3300005455|Ga0070663_101044341All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300005457|Ga0070662_101326845All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300005458|Ga0070681_10716361All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria917Open in IMG/M
3300005459|Ga0068867_101472645All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300005526|Ga0073909_10547272All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300005537|Ga0070730_10398301All Organisms → cellular organisms → Bacteria → Proteobacteria891Open in IMG/M
3300005537|Ga0070730_11025658All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300005545|Ga0070695_100042798All Organisms → cellular organisms → Bacteria2877Open in IMG/M
3300005546|Ga0070696_100248142All Organisms → cellular organisms → Bacteria1345Open in IMG/M
3300005562|Ga0058697_10655681All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300005843|Ga0068860_102311636All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300005886|Ga0075286_1046187All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300006163|Ga0070715_10102472All Organisms → cellular organisms → Bacteria1337Open in IMG/M
3300006173|Ga0070716_100482900All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria910Open in IMG/M
3300006796|Ga0066665_11296499All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300007004|Ga0079218_12364410All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300007004|Ga0079218_13034356All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300009012|Ga0066710_101505343All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300009091|Ga0102851_12572122All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300009094|Ga0111539_10489832All Organisms → cellular organisms → Bacteria1432Open in IMG/M
3300009094|Ga0111539_10579275All Organisms → cellular organisms → Bacteria1307Open in IMG/M
3300009102|Ga0114948_11274905All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300009156|Ga0111538_10274501All Organisms → cellular organisms → Bacteria2133Open in IMG/M
3300009157|Ga0105092_10121487All Organisms → cellular organisms → Bacteria1442Open in IMG/M
3300009522|Ga0116218_1430784All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300009553|Ga0105249_13332747All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300009798|Ga0105060_127693All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300010040|Ga0126308_10456614All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium859Open in IMG/M
3300010040|Ga0126308_10899614All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300010041|Ga0126312_10833300All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300010379|Ga0136449_102703716All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300010399|Ga0134127_10452732All Organisms → cellular organisms → Bacteria1283Open in IMG/M
3300010403|Ga0134123_12571374All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300011419|Ga0137446_1185933All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300012019|Ga0120139_1161608All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300012187|Ga0136622_10202345All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300012187|Ga0136622_10504437All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300012201|Ga0137365_10901016All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300012208|Ga0137376_10900253All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium760Open in IMG/M
3300012530|Ga0136635_10356913All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300012683|Ga0137398_11019480All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300012903|Ga0157289_10078787All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium900Open in IMG/M
3300012931|Ga0153915_13389902All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300012951|Ga0164300_10172672All Organisms → cellular organisms → Bacteria1034Open in IMG/M
3300012955|Ga0164298_10108410All Organisms → cellular organisms → Bacteria1485Open in IMG/M
3300012957|Ga0164303_10364439All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300012957|Ga0164303_10899283All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300012960|Ga0164301_11722350All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300012984|Ga0164309_11281939All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300013100|Ga0157373_11089152All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300013308|Ga0157375_12177574All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium660Open in IMG/M
3300014201|Ga0181537_10488416All Organisms → cellular organisms → Bacteria843Open in IMG/M
3300014270|Ga0075325_1001332All Organisms → cellular organisms → Bacteria4061Open in IMG/M
3300014326|Ga0157380_11180349All Organisms → cellular organisms → Bacteria808Open in IMG/M
3300015264|Ga0137403_10223303All Organisms → cellular organisms → Bacteria1805Open in IMG/M
3300015374|Ga0132255_105637043All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300018028|Ga0184608_10013502All Organisms → cellular organisms → Bacteria2838Open in IMG/M
3300018028|Ga0184608_10059593All Organisms → cellular organisms → Bacteria1525Open in IMG/M
3300018075|Ga0184632_10437080All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300018084|Ga0184629_10120725All Organisms → cellular organisms → Bacteria1304Open in IMG/M
3300018422|Ga0190265_10469990All Organisms → cellular organisms → Bacteria1366Open in IMG/M
3300018422|Ga0190265_10500922All Organisms → cellular organisms → Bacteria1327Open in IMG/M
3300018422|Ga0190265_11313696All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium840Open in IMG/M
3300018465|Ga0190269_11364003All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300018476|Ga0190274_11701789All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium725Open in IMG/M
3300018482|Ga0066669_11471868All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300018920|Ga0190273_11597315All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300019377|Ga0190264_11468963All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300019377|Ga0190264_12013113All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300019458|Ga0187892_10308357All Organisms → cellular organisms → Bacteria786Open in IMG/M
3300019729|Ga0193968_1053575All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300019877|Ga0193722_1048756All Organisms → cellular organisms → Bacteria1075Open in IMG/M
3300021078|Ga0210381_10077965All Organisms → cellular organisms → Bacteria1044Open in IMG/M
3300021078|Ga0210381_10320332All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300021080|Ga0210382_10357253All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300021080|Ga0210382_10402602All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300021080|Ga0210382_10478817All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300025325|Ga0209341_10597508All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium865Open in IMG/M
3300025325|Ga0209341_10986918All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300025463|Ga0208193_1092703All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300025537|Ga0210061_1076878All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium582Open in IMG/M
3300025906|Ga0207699_10843510All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300025912|Ga0207707_10975407All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium697Open in IMG/M
3300025945|Ga0207679_11233681All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium686Open in IMG/M
3300026000|Ga0208143_101946All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium743Open in IMG/M
3300026020|Ga0208531_1025894All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300026088|Ga0207641_11376078All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium707Open in IMG/M
3300026095|Ga0207676_11231171All Organisms → cellular organisms → Bacteria742Open in IMG/M
3300026121|Ga0207683_12175452All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300027682|Ga0209971_1180167All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300027717|Ga0209998_10141898All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium614Open in IMG/M
3300027831|Ga0209797_10434652All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300027905|Ga0209415_10582154All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300027907|Ga0207428_10233666All Organisms → cellular organisms → Bacteria1375Open in IMG/M
3300028589|Ga0247818_11024341All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium584Open in IMG/M
3300028592|Ga0247822_11028469All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium681Open in IMG/M
3300028713|Ga0307303_10014783All Organisms → cellular organisms → Bacteria1436Open in IMG/M
3300028713|Ga0307303_10161232All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300028719|Ga0307301_10207673All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300028791|Ga0307290_10244727All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium657Open in IMG/M
3300028792|Ga0307504_10309282All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300028811|Ga0307292_10394559All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300028814|Ga0307302_10610193All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300028824|Ga0307310_10599469All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300028824|Ga0307310_10679484All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300028828|Ga0307312_10195842All Organisms → cellular organisms → Bacteria1296Open in IMG/M
3300028828|Ga0307312_10606432All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium724Open in IMG/M
3300028828|Ga0307312_10846063All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300028885|Ga0307304_10348483All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium661Open in IMG/M
3300028885|Ga0307304_10463516All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300030006|Ga0299907_10679312All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium791Open in IMG/M
3300030336|Ga0247826_11612083All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300030520|Ga0311372_11705442All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300030677|Ga0302317_10495166All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300030904|Ga0308198_1053035All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300031824|Ga0307413_10009721All Organisms → cellular organisms → Bacteria → Proteobacteria4619Open in IMG/M
3300031824|Ga0307413_10891697All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300031824|Ga0307413_11052223All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300031852|Ga0307410_10100456All Organisms → cellular organisms → Bacteria2072Open in IMG/M
3300031858|Ga0310892_10164142All Organisms → cellular organisms → Bacteria1302Open in IMG/M
3300031892|Ga0310893_10414784All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300031901|Ga0307406_10822316All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300031903|Ga0307407_10086236All Organisms → cellular organisms → Bacteria1912Open in IMG/M
3300031962|Ga0307479_11485564All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300032002|Ga0307416_100042040All Organisms → cellular organisms → Bacteria3564Open in IMG/M
3300032002|Ga0307416_102008047All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300032002|Ga0307416_103416638All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300032004|Ga0307414_10210891All Organisms → cellular organisms → Bacteria1587Open in IMG/M
3300032004|Ga0307414_10220171All Organisms → cellular organisms → Bacteria1558Open in IMG/M
3300032005|Ga0307411_10909070All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium782Open in IMG/M
3300032126|Ga0307415_100003448All Organisms → cellular organisms → Bacteria8051Open in IMG/M
3300032126|Ga0307415_101064984All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300032126|Ga0307415_101107261All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium742Open in IMG/M
3300032164|Ga0315283_10764111All Organisms → cellular organisms → Bacteria1037Open in IMG/M
3300032177|Ga0315276_11941923All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300032180|Ga0307471_104308679All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300032205|Ga0307472_100963794All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300033475|Ga0310811_11269623All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300033811|Ga0364924_130379All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300033813|Ga0364928_0186636All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300034099|Ga0373902_022720All Organisms → cellular organisms → Bacteria1187Open in IMG/M
3300034178|Ga0364934_0006992All Organisms → cellular organisms → Bacteria3931Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil20.89%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere9.49%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.43%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment3.16%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.16%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.16%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.53%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.53%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.53%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.53%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand1.90%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.90%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.90%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.90%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.90%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.90%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.90%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.90%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.90%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.90%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.27%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.27%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.27%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil1.27%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.27%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.27%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.27%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.27%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.63%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.63%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.63%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.63%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment0.63%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.63%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.63%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.63%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.63%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.63%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.63%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.63%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.63%
Bio-OozeEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze0.63%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.63%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.63%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.63%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.63%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave0.63%
Sediment SlurryEngineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry0.63%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300003992Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1EnvironmentalOpen in IMG/M
3300003994Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005562Agave microbial communities from Guanajuato, Mexico - As.Ma.eHost-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005886Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009102Deep subsurface microbial communities from Mariana Trench to uncover new lineages of life (NeLLi) - CR04 metaGEnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009798Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_40_50EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011419Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2EnvironmentalOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300012187Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ448 (21.06)EnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012530Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)EnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012903Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014201Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaGEnvironmentalOpen in IMG/M
3300014270Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019458Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaGEnvironmentalOpen in IMG/M
3300019729Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_4-5_MGEnvironmentalOpen in IMG/M
3300019877Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1EnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300025325Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025463Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025537Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026000Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_404 (SPAdes)EnvironmentalOpen in IMG/M
3300026020Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403 (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027682Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027717Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027831Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028713Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030677Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3EnvironmentalOpen in IMG/M
3300030904Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031892Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032164Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0EnvironmentalOpen in IMG/M
3300032177Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M
3300033811Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17EnvironmentalOpen in IMG/M
3300033813Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17EnvironmentalOpen in IMG/M
3300034099Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.3EngineeredOpen in IMG/M
3300034178Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10445483223300000364SoilMTPPRQKLFSFRWDIDHRACITDGLPRIMRVCREFGVANTFFVNMGRSTNLKEWLRGLSGSRAKLNDMQAIHLIRKIGWRRFVVETMLARPVGSSFIEALERTAADG
JGI10216J12902_11211919923300000956SoilVSERLFAFRWDVDHRVCATDGLPRIQAACRDFGVPNTFFVNMGRSTNLVEWIGQGTERSKAKLADRDAVHLIKKTGWPRFILETAL
C688J35102_11791963213300002568SoilVSERVFAFRWDVDHRVCVTDGLPRIRAVCRDFGVPNTFFVNMGRSTNLREWLGAGAARSKAKLADREAVHLIKKT
soilH2_1014673043300003324Sugarcane Root And Bulk SoilVTDRLFAFRWDVDHRVCATDGLPRIRTVCRDFGVPNTFFVNMGRSTNLLEWIGAGMARSKAKLADREAVHLIKKTGWPRFVL
soilH2_1014673123300003324Sugarcane Root And Bulk SoilVTERLFAFRWDVDHRVCATDGLPRIRAACRDFGVPNTFFINMGRSTNLLEWIGPGTARSKAKLADRDAVHLIKKTGWPRF
Ga0055470_1021011823300003992Natural And Restored WetlandsVSQRQFVFRWDVDHRVCVTDGIPRIRAVCRDFGVPNTFFVNMGRSTNLREWLGKGMVRSKAKLADKDAVHLIQKTG
Ga0055435_1008185123300003994Natural And Restored WetlandsVTDRLFIFRWDVDHRVCVTDGLPRIRAVCRDYGVANTFFVNLGRSTNLREWLGKGLTRSKAK
Ga0063356_10456999813300004463Arabidopsis Thaliana RhizosphereVSQRQFVFRWDVDHRVCITDGIPRIRAVCRDFGVPNTFFVNMGRSTNLREWLGKGMVRSKAKLADKNAV
Ga0066676_1086317223300005186SoilVTDRLFAFRWDVDHRVCATDGVPRIRAVCRDFGVPNTFFVNMGRSTNLLEWIGSGMARSKAKL
Ga0066388_10112627313300005332Tropical Forest SoilVSDRLFAFRWDVDHRVCITDGLPRIRAVCRDFGVPNTFFINLGRSTNLREWLGKGVTRSKAKLADRDAVHLIKKTGWPRFLVETALGRP
Ga0066388_10393198713300005332Tropical Forest SoilVTDRRFIFRWDVDHRVCVTDGLPKIRSVCQDFGVANTFFVNMGRSTNLREWLGKGIVRSRAKLADRE
Ga0070682_10191265113300005337Corn RhizosphereVTERLFAFRWDVDHRVCATDGLPRIQAACRDFGVPNTFFVNMGRSTNLVEWIGQGTARSKAKLADRDAVHLIKKTGWPRFILET
Ga0070660_10040242013300005339Corn RhizosphereVTERLFAFRWDVDHRVCATDGLPRIQAACRDFGVPNTFFVNMGRSTNLVEWIGQGTARSKAKLADRDAV
Ga0070713_10231407613300005436Corn, Switchgrass And Miscanthus RhizosphereVTDRLFAFRWDVDHRVCITDGLPRIRAVCRDFGVPNTFFVNLGRSTNLREWLGKGITRSKAKLADRDAVHLIKKTGWPRFLMET
Ga0070711_10168296713300005439Corn, Switchgrass And Miscanthus RhizosphereVTDRLFAFRWDVDHRVCITDGLPRIRAVCRDFGVPNTFFVNLGRSTNLREWLGKGITRSKAKLADRDAVHLIKK
Ga0070663_10053462113300005455Corn RhizosphereVSERLFAFRWDVDHRVCATDGLPRIQAACRDFGVPNTFFVNMGRSTNLVEWIGQGTARSKAKLADRDAVHLIKKTGWPRFILETALSRPV
Ga0070663_10104434123300005455Corn RhizosphereVSERLFAFRWDVDHRVCVTDGLPRIRAVCRDFGVPNTFFVNMGRSTNLREWVGKGVTRSKAKFADREAVHLIKKTGWPRF
Ga0070662_10132684523300005457Corn RhizosphereLSDKLFTFRWDVDHRVCVTDGIPRIKELCRDLGVPNTFFVNMGRSTNLREWLGKGLAGSKAKLS
Ga0070681_1071636123300005458Corn RhizosphereVSDRLFAFRWDIDHRVCVTDGLPRISAVCRDFGVPNTFFVNLGRSTNLREWVGKGISRSKAKFADREAVHLIKKTG
Ga0068867_10147264513300005459Miscanthus RhizosphereVTDRLFAFRWDVDHRVCITDGLPRIQAVCRDFGVPNTFFVNLGRSTNLREWLGKGISRSQAKLADRDAVHLIKKTGWPRFLVETALSRPVGLRF
Ga0073909_1054727223300005526Surface SoilVTDRLFAFRWDIDHRVCVTDGLPRISAVCRDFGVPNTFFVNLGRSTNLREWLGKGVSRYKAKFADREAVHLIKKTGWPRFLVETALARPV
Ga0070730_1039830113300005537Surface SoilMTEKLFSFRWDIDHRACITDGLPRIMQVCDEFGVKNTFFVNMGRATNLKEWLMKGGLKGSKAKLNDMEAVHLIKKIGWPRF
Ga0070730_1102565823300005537Surface SoilVTRRLFAFRWDVDHRVCITDGIPRIRAVCRELGVPHTFFVNLGRSTNLRAWLGKGFERSRAKLGDMEAIHLIRKTGWPRFMLETVLSRPVGLSFLPELRALQAEGHELG
Ga0070695_10004279813300005545Corn, Switchgrass And Miscanthus RhizosphereMSEKLFVFRWDVDHRVCVTDGIPKIRAICRDFGVPNTFFINVGRSTNLREWLGKGLARSRAKFSDRDAVHLIKKTGWP
Ga0070696_10024814223300005546Corn, Switchgrass And Miscanthus RhizosphereVTDRLFAFRWDVDHRVCITDGLPRIRAVCRDFGVPNTFFINLGRSTNLREWLGKGVARSKAKLADREAVHLI
Ga0058697_1065568123300005562AgaveVTERLFAFRWDVDHRVCATDGLPRIRAACRDFGVSNTFFVNMGRSTNLLEWIGPGIARSKAKLADRDAVHLIKKTGWPRFILETALSRPVG
Ga0068860_10231163613300005843Switchgrass RhizosphereVSARLFAFRWDIDHRVCVTDGLPRIRAVCRDFGVPNTFFVNLGRSTNLREWLGKGVSRSKAKFADREAVHLIKKTGWPRFLLETALARPVGLSFVP
Ga0075286_104618723300005886Rice Paddy SoilVTDRLFAFRWDVDHRVCATDGLPRIRAVCRDFGVPNTFFINMGRSTNLLEWLGAGMARSKAKLADREAVHLIKKTGWPRFVLETTLSRPV
Ga0070715_1010247223300006163Corn, Switchgrass And Miscanthus RhizosphereVTDRLFAFRWDVDHRVCITDGLPRIRAVCRDFGVPNTFFVNLGRSTNLREWLGKGITRSKAKLADRDAVHLIKKTGWPRFLMETALSRPVGLKF
Ga0070716_10048290023300006173Corn, Switchgrass And Miscanthus RhizosphereMSEKLFVFRWDVDHRVCVTDGIPKIRAICRDFGVPNTFFINVGRSTNLREWLGKGVARSRAKFSDRDAVHLIKKTGWPRFLLETALARPVGLSFMPVFHDMQRE
Ga0066665_1129649923300006796SoilVTDRLFSFRWDVDHRVCITDGLPRIRAVCRDFGVPNTFFVNLGRSTNLREWLGKGITRSKAKLADREAVHLIKKTGWPRFLVETALARPV
Ga0079218_1236441023300007004Agricultural SoilVTDRLFIFRWDVDHRVCITDGLPRIRSVCRDFAVPNTFFVNMGRSTNLREWLGKGVVRSKAKLADKDA
Ga0079218_1303435613300007004Agricultural SoilVTERVFAFRWDVDHRVCVTDGLPKIRDVCRDFGVPNTFFVNMGRSTNLIEWLGSGMARSKAKLADREAVHLIK
Ga0066710_10150534323300009012Grasslands SoilMTAERRFTFRWDVDHRACITDGLPRIRAVCRDLGVANTFFINMGRSTNLGEWLSGLSGTRNKLKDREAVHLIAKIGWPRFILETLLGR
Ga0102851_1257212213300009091Freshwater WetlandsLSEKRFAFRWDVDHRMCVTDGIPRIRLVCRELGVANTFFVNMGRSTNLGEWLGGLGRTRDKLQDKEAVHLIAKTGWPR
Ga0111539_1048983213300009094Populus RhizosphereVTERLFAFRWDVDHRVCATDGLPRIQAACRDFGVPNTFFVNMGRSTNLVEWIGQGTARSKAKLADRDAVHLIKKTGWPRFILETALSRPVG
Ga0111539_1057927513300009094Populus RhizosphereVSERLFAFRWDVDHRVCATDGLPRIQAACRDFGVPNTFFVNMGRSTNLVEWIGQGTARSKAKLADRDAV
Ga0114948_1127490513300009102Deep SubsurfaceMIRSNRKDKEVNEKLFSLRWDIDHRACITDGLPKIIQVCNDLGVANTFFVNMGKSTNLREWIGKGFSGSRAKFSDTESINLIRKIGW
Ga0111538_1027450113300009156Populus RhizosphereVTERLFAFRWDVDHRVCATDGLPRIQAACRDFGVPNTFFVNMGRSTNLVEWIGQGTARSKAKL
Ga0105092_1012148723300009157Freshwater SedimentVTDRLFVFRWDVDHRVCMTDGMPRIRAVCRDFGMPNTFFVNLGRSTNLREWLGKGVTRSKAKLADREAVHLIQKTGWPRFLLETALSRPVGLSFIPELNALQAEGHE
Ga0116218_143078423300009522Peatlands SoilMTEKLFSFRWDIDHRACITDGLPRIMQVCDEFGVKNTFFVNMGRATNLKEWLMKGGLKGSKAKLNDMEAVHLIKKIGWPRFILET
Ga0105249_1333274723300009553Switchgrass RhizosphereVSDRLFAFRWDVDHRVCVTDGLPRITAVCRDFGVPNTFFVNLGRSTNLREWLGKGVTRSKAKLADRDAVHLIKKTGWPRFLVETALARPVGLSFVPEIQQLQAEGHEL
Ga0105060_12769323300009798Groundwater SandVSERLFVFRWDVDHRVCATDGLPRIRAACRDFGVPNTFFVNMGRSTNLLEWIGKGSARSKAKLADRDAVHLIKKT
Ga0126308_1045661423300010040Serpentine SoilVTERLFAFRWDVDHRVCATDGLPRIRDACRDFGVPNTFFVNMGRSTNLLEWIGEGTARSKAKLADREAVHLIKK
Ga0126308_1089961413300010040Serpentine SoilVSERLFAFRWDVDHRVCVTDGLPRIRAVCRDFGVPNTFFVNLGRSTNLREWLGKGIGRSRSKLADREAVHLIRKTGWRRFLVETALA*
Ga0126312_1083330013300010041Serpentine SoilVSERLFAFRWDVDHRVCVTDGLPRIRAVCRDFGVPNTFFVNMGRSTNLREWVGKGVTRSKAKFADREAVHLIKKTGWP
Ga0136449_10270371623300010379Peatlands SoilVTAVTEKLFSFRWDIDHRACITDGLPRIMQVCDEFGVKNTFFVNMGRATNLKEWLTKGGLKGSKAKLNDMEAVHLIKKIGWPRFILET
Ga0134127_1045273223300010399Terrestrial SoilVSDRLFAFRWDIDHRVCVTDGLPRISAVCRDFGVPNTFFVNMGRSTNLLEWIGSGMARSKAKLADREAVHLIKKTGWPRFLI
Ga0134123_1257137413300010403Terrestrial SoilVTERLFAFRWDVDHRVCATDGLPRIQAACRDFGVPNTFFVNMGRSTNLLEWIGQGTARSKAKLADRDAVHLIKKTGWP
Ga0137446_118593313300011419SoilVTERLFAFRWDVDHRVCATDGLPKIRAVCRDFGVPNTFFVNMGRSTNLVEWIGAGTARSKAKLADRDAVHLIKKAGWPRFLIETALSRPVGLSFVPLLQSL
Ga0120139_116160823300012019PermafrostVSDRLFVFRWDVDHRVCVTDGLPRIRAVCRDFGVPNTFFVNMGRSTNLREWLGKGIARSKAKLADREAVQGNLGGTAKQD
Ga0136622_1020234523300012187Polar Desert SandVTERLFAFRWDVDHRVCATDGLPKIRAVCRDFGVPNTFFVNMGRSTNLVEWIGSGMARSTAKLADRE
Ga0136622_1050443713300012187Polar Desert SandLTERLFVFRWDVDHRVCMTDGMPRIRAVCRDFGVPSTFFVNLGRSTNLREWLGKGVTRSKAKLADREAVHLIKKTGWSRFIVETALARPVGLSFIPELQAFQAEGHELGLHGG
Ga0137365_1090101623300012201Vadose Zone SoilVSDRLFVFRWDVDHRVCVTDGLPRIRAVCRDFGVPNTFFVNMGRSTNLREWLGKGIARSKAKLADREAVHLIKKTGWPRFLVETALGRPVGLNFVSVLHATQAEGHE
Ga0137376_1090025313300012208Vadose Zone SoilVTDRLFAFRWDVDHRVCATDGVPRIRAVCRDFGVPNTFFVNMGRSTNLLEWIGSGMARSKAKFADREAVHLIKKTGWPRFLIETALARPVGL
Ga0136635_1035691313300012530Polar Desert SandVTDRLFSFRWDVDHRVCITDGLPRIRAVCRDFGVPNTFFVNLGRSTNLREWVGKGVTRSKAKLADRDAVH
Ga0137398_1101948023300012683Vadose Zone SoilVTDRLFSFRWDVDHRVCITDGLPRIRAVCRDFGVPNTFFVNLGRSTNLREWLGKGITRSKAKLADREAVHLIKKTGWPRFLVETALARPVGL
Ga0157289_1007878723300012903SoilVTERLFAFRWDVDHRVCATDGLPRIQAACRDFGVPNTFFVNMGRSTNLVEWIGQGTARSKAKLADRDAVHLIKKTGWPRFILETALSRP
Ga0153915_1338990213300012931Freshwater WetlandsVTDRLFAFRWDVDHRVCVTDGLPRIRAVCRDYGVANTFFINLGRSTNLREWLGKGVARSKAKLGDRDAVHL
Ga0164300_1017267213300012951SoilVTDRLFAFRWDVDHRVCITDGLPRIQAVCRDFGVPNTFFVNLGRSTNLREWLGKGISRSQAKLADRDAVHLIKKTGWPR
Ga0164298_1010841023300012955SoilVTDRLFAFRWDVDHRVCITDGLPRIRSVCRDFGVPNTFFVNLGRSTNLREWLGKGVTRSKAKLADRDAVHLIKKTGW
Ga0164303_1036443923300012957SoilVTDRLFAFRWDVDHRVCITDGLPRIRSVCRDFGVPNTFFVNLGRSTNLREWLGKGVTRSKAKLADRDAVHLIKKTGWPRFLVE
Ga0164303_1089928313300012957SoilVTDRLFAFRWDVDHRVCITDGLPRIRAVCRDFGVPNTFFVNLGRSTNLREWLGKGITRSKAKLADRDAVHLIKKTGWPRFLVE
Ga0164301_1172235013300012960SoilVTDRLFAFRWDVDHRVCITDGLPRIRSVCRDFGVPNTFFVNLGRSTNLREWLGKGVTRSKAKLAD
Ga0164309_1128193913300012984SoilVTERLFAFRWDVDHRVCATDGLPRIRAVCRDFGVPNTFFINMGRSTNLLECIGHGTARSKAKLADREAIHLIKKTGWPRFILETALSRPVGLSFVPLLHAMQ
Ga0157373_1108915213300013100Corn RhizosphereVTERLFAFRWDVDHRVCATDGLPRIQAACRDFGVPNTFFVNMGRSTNLAEWIGQGPARPRTKLAD
Ga0157375_1217757423300013308Miscanthus RhizosphereVTERLFAFRWDVDHRVCATDGLPRIQAACRDFGVPNTFFVNMGRSTNLVEWIGQGTARSKAKLADQDAVHLIKKTGWPRFILETA
Ga0181537_1048841623300014201BogMASKVAAMTEKLFSFRWDIDHRACITDGLPKIMQICDEFGVKNTFFVNMGRATNLKEWLLKGGLKGSKAKLNDMEAVHLIKKIGWPRFVL
Ga0075325_100133213300014270Natural And Restored WetlandsVSQRQFVFRWDVDHRVCVTDGIPGIRAVCRDFGVPNTFFVNMGRSTNLREWLGKGMVRSKAKLANKDAV
Ga0157380_1118034913300014326Switchgrass RhizosphereMSERLFAFRWDVDHRVCATDGLPRIRAVCRDFGVPNTFFVNMGRSTNLLEWIGPGTARTKAKLADREAVHLIKKTGWPRFLLETVLSRPVGLSFIPLLQ
Ga0137403_1022330323300015264Vadose Zone SoilVTDRLFSFRWDVDHRVCITDGLPRIRTVCRDFGVPNTFFVNLGRSTNLREWLGKGITRSKAKLADRDAVHLIKKT
Ga0132255_10563704313300015374Arabidopsis RhizosphereVTDRLFAFRWDVDHRVCITDGLPRIRSVCRDFGVPNTFFVNLGRSTNLREWLGKGVTRSKAKLADRDAVHLIKKTGWPRFLVETALSRPVGLNFVP
Ga0184608_1001350213300018028Groundwater SedimentVTDRLFAFRWDVDHRVCATDGLPRVRAVCRDFGVPNTFFVNMGRSTNLLEWIGSGMARSKAKLADREAVHLIKKAGWPRFLIETALARPVGLS
Ga0184608_1005959323300018028Groundwater SedimentVSDRLFAFRWDIDHRVCVTDGLPRIRAVCRDFGVPNTFFVNLGRSTNLREWLGKGVSRSKAKFADREAVHLIKKTGWPRFLLETALARPVGLSFVPEIQRLQAEGHELGL
Ga0184632_1043708013300018075Groundwater SedimentVTDRLFAFRWDVDHRVCATDGLPRIRTVCRDFGVPNTFFVNMGRSTNLLEWLGSGMARSKAKLADREAVHLIKKTGWPRFL
Ga0184629_1012072523300018084Groundwater SedimentVSDRLFAFRWDVDHRVCVTDGLPRISAVCRDFGVPNTFFVNLGRSTNLREWLGKGISRSKAKF
Ga0190265_1046999013300018422SoilVTERLFAFRWDVDHRVCATDGIPKIRTVCRDFGVPNTFFVNMGRSTNLVEWIGAGAARSKAKLADRDAVHLIKKTGWPRFLIETALS
Ga0190265_1050092223300018422SoilVTDRLFIFRWDVDHRVCVTDGLPRIRSVCRDFGVPNTFFVNLGQSTNLREWLGKGIVRSRAKLADKN
Ga0190265_1131369623300018422SoilVSDRLFVFRWDVDHRVCVTDGLPRIRSVCRDFAVPNTFFVNMGRSTNLREWLGKGMVRSKAKL
Ga0190269_1136400313300018465SoilVTERLFAFRWDVDHRVCATDGLPKIRAACRDFGVPNTFFVNMGRSTNLVEWIGSGMARSKAKLADREAVHLIKKTGWPR
Ga0190274_1170178923300018476SoilVSQRQFVFRWDVDHRVCVTDGIPRIRAVCRDFGVPNTFFVNMGRSTNLREWLGKGMVRSKAKLADKDAVHLIQKTGWPRFLLETALAR
Ga0066669_1147186813300018482Grasslands SoilVTDQLFAFRWDVDHRVCIIDGLPRIRSVCRDFGVPNTFFVNLGRSTNLREWLGKGVTRSKAKLTDRDAVHLIKKTGWPRFLVETALSRPVGLNFVPEIQ
Ga0190273_1159731513300018920SoilVTERVFAFRWDVDHRVCATDGLPKIQAACRDFGVPNTFFVNMGRSTNLVEWIGSGMARSKAKLADREAVHLIKKTGWPRFIIETA
Ga0190264_1146896323300019377SoilVTERLFAFRWDVDHRVCATDGIPKIREVCRDFGVPNTFFVNMGRSTNLVEWIGAGTARSKAKLADRDAVHLIKKTGWPRFLIET
Ga0190264_1201311323300019377SoilVTERLFAFRWDVDHRVCATDGLPRIRAVCRDFGVPNTFFVNMGRSTNLLEWIGKGSARSKAKFGDRDAVHLIK
Ga0187892_1030835723300019458Bio-OozeMSERLFSFRWDIDHRACITDGLPRIRALCRELGVRHSFFVNLGRSTNLREWLRGLSRTREKLADADAIHLIAKIGLGRFALETLLARP
Ga0193968_105357523300019729SedimentMNHWNYDVNEKLFSLRWDIDHRACITDGLPKIMEVCDELGVANTFFVNMGKSTNLREWIGKGFSGSRAKLTDTESVNLIE
Ga0193722_104875613300019877SoilVSDRLFAFRWDIDHRVCITDGLPRIRAVCRDFAVPNTFFVNLGRSTNLREWLGSGITRSRAKLADREAVHLIKKTGWPRFLVETA
Ga0210381_1007796523300021078Groundwater SedimentVTDRLFAFRWDVDHRVCATDGLPRIRQVCRDFGVPNTFFVNMGRSTNLLEWIGPGTARSKAKLADREAVHLIKKTG
Ga0210381_1032033223300021078Groundwater SedimentVTDRLFAFRWDVDHRVCATDGLPRIREVCRDFGVPNTFFVNMGRSTNLLEWIGSGMARSKAKLADREAVHLIKKTGWP
Ga0210382_1035725313300021080Groundwater SedimentVSDRLFVFRWDVDHRVCVTDGLPRIRAVCRDFGVPNTFFVNMGRSTNLREWLGKGIVRSKAKLADREAVHLIKKTGWPRFIIETAL
Ga0210382_1040260223300021080Groundwater SedimentVTDRLFAFRWDVDHRVCATDGLPRVRAVCRDFGVPNTFFVNMGRSTNLLEWIGSGMARSKAKLADREAVHLIKKAGWPRFLIETALARPVGL
Ga0210382_1047881713300021080Groundwater SedimentVTERLFAFRWDVDHRVCATDGIPKIREVCRDFGVPNTFFVNMGRSTNLFEWIGAGTARSKAKLADRDAVHLIKKAGWPRFL
Ga0209341_1059750823300025325SoilVTERLFAFRWDVDHRVCVTDGIPKIRAVCRDFGVPNTFFVNMGRSTNLVEWIGAGTARSKAKLADRDAVHLIKKTGW
Ga0209341_1098691823300025325SoilMTEKLFSLRWDVDHRACLTDGVPRIREICRELGVHNTFFVNLGRSTNLREWLGGLGQSRAKLRDPESIHLVAKIGW
Ga0208193_109270323300025463PeatlandVTATTEKLFSFRWDIDHRACITDGLPRIMQVCDEFGVKNTFFVNMGRSTNLKEWLSKGGLKGSKAKLNDMEAVHLIK
Ga0210061_107687823300025537Natural And Restored WetlandsVSERVFVFRWDVDHRVCVTDGLPRIRAVCRDFGVPNTFFVNMGRSTNLREWLGKGVARSKAKLAD
Ga0207699_1084351013300025906Corn, Switchgrass And Miscanthus RhizosphereVSDRLFAFRWDVDHRVCITDGLPRIRAVCRDFGVPNTFFVNLGRSTNLREWLGKGVTRSRAKLADREAVHLIKKTGWPRFLVETALARPVGLSFVADIQALQ
Ga0207707_1097540723300025912Corn RhizosphereVTDRLFAFRWDVDHRVCITDGLPRIRAVCRDFGVPNTFFVNLGRSTNLREWLGKGITRSKAKLADPDAVHLIKKTGWPRFIVETALSRPVGLTFVPEIQALQAEGHEL
Ga0207679_1123368123300025945Corn RhizosphereVSERLFAFRWDVDHRVCATDGLPRIQAACRDFGVPNTFFVNMGRSTNLVEWIGQGTARSKAKLADRD
Ga0208143_10194623300026000Rice Paddy SoilVTDRRFVFRWDVDHRVCVTDGLPRIRTVCRDFGVANTFFVNMGRSTNLREWVGKGLVRSRAKLSDREAVHLIKKTGWPRFLLETAL
Ga0208531_102589423300026020Rice Paddy SoilVSDRLFAFRWDVDHRVCITDGLPRISTVCRDFGVPNTFFINLGRSTNLREWLGKGITRSKAKLADRDAVHLIKKTGWPRFLVETVLARPVGLRFIPEIQA
Ga0207641_1137607813300026088Switchgrass RhizosphereVSERVFAFRWDVDHRVCITDGLPRIRAVCREFGVPNTFFINLGRSTNLREWLGKGVARSKAKLGDRDAVHLIKKTG
Ga0207676_1123117123300026095Switchgrass RhizosphereMNTSREKLFSFRWDIDHRACITDGLPRVMRVCAELGVVNTFFVNMGRSTNLKEWLSKGGLKGSKAKLQDMEAVHLI
Ga0207683_1217545213300026121Miscanthus RhizosphereVSERVFAFRWDVDHRVCVTDGLPRIRAVCRDFGVPNTFFVNLGRSTNLREWLGKGVTRSKAKLADREAVHLIQKTGLP
Ga0209971_118016723300027682Arabidopsis Thaliana RhizosphereVSERVFVFRWDVDHRVCVTDGLPRIRAVCRDFGVPNTFFVNMGRSTNLREWLGKGVARSKAKLADRE
Ga0209998_1014189813300027717Arabidopsis Thaliana RhizosphereVSERVFVFRWDVDHRVCVTDGLPRIRAVCRDFGVPNTFFVNMGRSTNLREWLGKGVARSKAKLA
Ga0209797_1043465223300027831Wetland SedimentVSDRLFAFRWDVDHRVCVTDGLPRIRAVCRDFGVPNTFFVNMGRSTNLREWIGKGVTRSKAKLADREAVHLIKKTGW
Ga0209415_1058215423300027905Peatlands SoilMSEKLFSFRWDIDHRACITDGLPRIMRVCAEFNVKNTFFVNMGRSTNLKEWLSKGGIKGSKAKLNDMEAI
Ga0207428_1023366613300027907Populus RhizosphereVTERLFAFRWDVDHRVCATDGLPRIQAACRDFGVPNTFFVNMGRSTNLVEWIGQGTARSKAKLADRDAVHL
Ga0247818_1102434113300028589SoilVSQRQFVFRWDVDHRVCVTDGIPRIRAVCRDFGVPNTFFVNMGRSTNLREWLGKGMVRSKAKLADKDAVHLIQKTGWPRFLLE
Ga0247822_1102846923300028592SoilVSERLFAFRWDVDHRVCATDGLPRIQAACRDFGVPNTFFVNMGRSTNLVEWIGQGTARSKAKLADRDAVHLIKKTGWPRFILETALS
Ga0307303_1001478323300028713SoilVTDRLFAFRWDVDHRVCATDGLPRVRAVCRDFGVPNTFFVNMGRSTNLLEWIGSGMARSKAKLADRE
Ga0307303_1016123223300028713SoilVTDRLFSFRWDIDHRVCITDGLPRIRAVCRDFGVPNTFFVNLGRSTNLREWLGSGVARSKAKLADRDAVHLIK
Ga0307301_1020767323300028719SoilVTDRLFAFRWDVDHRVCATDGLPRVRAVCRDFGVPNTFFVNMGRSTNLLEWIGSGMARSKAKLADREAVHLIKKAGWPRFLIETALARPVGLSFVPLFQELQAE
Ga0307290_1024472713300028791SoilVTERLFAFRWDVDHRVCATDGIPKIREVCRDFGVPNTFFVNMGRSTNLFEWIGAGTARSKAKLADRDAVHLIKKAGWPRF
Ga0307504_1030928213300028792SoilVSDRLFSFRWDVDHRVCITDGLPKIRAVCRDFGVPNTFFVNLGRSTNLREWLGKGVTRSRAKLADRDAVHLIRKTGWPRFLVEAVLARPVGLSFVPEL
Ga0307292_1039455923300028811SoilVTERLFAFRWDVDHRVCATDGVPKIRAVCRDFGVPNTFFVNMGRSTNLFEWIGAGTARSKAKLADRDAVHLIKKAGWPRFLIETALSRPVGLSF
Ga0307302_1061019323300028814SoilVSDRLFAFRWDIDHRVCVTDGLPRISAVCRDFGVPNTFFVNLGRSTNLREWLGKGVTRSKAKFADREAVHLIKKTGWPRFLLETA
Ga0307310_1059946923300028824SoilVTDRLFAFRWDVDHRVCATDGLPRIRSACRDFGVPNTFFVNMGRSTNLLEWIGQGTARSKAKLA
Ga0307310_1067948413300028824SoilVTDRLFAFRWDVDHRVCATDGLPRIREVCRDFGVPNTFFVNMGRSTNLLEWIGSGMARSKAKLADR
Ga0307312_1019584213300028828SoilVSDRLFVFRWDVDHRVCVTDGLPRIRAVCRDFGVPNTFFVNMGRSTNLREWLGKGIVRSKAKLADREA
Ga0307312_1060643213300028828SoilVTERLFAFRWDVDHRVCATDGVPKIRAVCRDFGVPNTFFVNMGRSTNLVEWIGAGMARSKAKLADREAVHLIKKA
Ga0307312_1084606313300028828SoilVSDRLFAFRWDIDHRVCVTDGLPRISAVCRDFGVPNTFFVNLGRSTNLREWLGKGVSRSKAKFADREAVHLIKKTGWPRFVLETALARP
Ga0307304_1034848313300028885SoilVTDRLFAFRWDVDHRVCATDGVPRIRAVCRDFGVPNTFFVNMGRSTNLLEWIGSGMARSKAKLADREAVHLIKKTGWPRFLIETALARPVG
Ga0307304_1046351613300028885SoilVTDRLFAFRWDVDHRVCATDGIPKIRNVCRDFGVPNTFFVNMGRSTNLVEWIGAGLARSKAKLADREAVHLIKKAGWPRFLLETALSRPVGLSFVPLLQE
Ga0299907_1067931213300030006SoilVSDRLFVFRWDVDHRVCVTDGIPRIRSVCRDFAVPNTFFVNMGRSTNLREWLGKGMVRSKAKL
Ga0247826_1161208313300030336SoilVSQRQFVFRWDVDHRVCVTDGIPRIRAVCRDFGVPNTFFVNMGRSTNLREWLGKGMVRSKAKLADKDAVHLI
Ga0311372_1170544223300030520PalsaMSDRVFSFRWDIDHRACITDGLPKILDVCDELGVKNTFFINMGKSTNLREWLGKGLRGSRAKMNDMDAIHLIKKIGWPRFGLETVLGRPVGASLIKPLEETQRR
Ga0302317_1049516623300030677PalsaMSDRVFSFRWDIDHRACITDGLPKILKVCDELGVKNTFFINMGKSTNLREWLGKGLRGSRAKMNDMDAIHLIKKIGWPRFGLETVLGRPVGASLIKPLEETQRRGH
Ga0308198_105303523300030904SoilVTDRLFAFRWDVDHRVCATDGLPRVRAVCRDFGVPNTFFVNMGRSTNLLEWIGSGMARSKAKLADR
Ga0307413_1000972163300031824RhizosphereVTERLFAFRWDVDHRVCATDGLPKIRAACRDFGVPNTFFVNMGRSTNLVEWIGSGMARSKAKLADREAVHLIKKTGWPRFIIETALSRPVG
Ga0307413_1089169713300031824RhizosphereVSERLFAFRWDVDHRVCATDGLPKIQSVCRDFGVPNTYFVNMGRSTNLVEWIGSGLARSKAKLADREAVHLIKKTGWPRFLIETAL
Ga0307413_1105222313300031824RhizosphereVTDRLFAFRWDVDHRVCATDGLPKIRAACRDFGVPNTFFVNMGRSTNLVEWIGSGMARSKAKLADREAVH
Ga0307410_1010045613300031852RhizosphereVTERLFAFRWDVDHRVCATDGLPKIQAACRDFGVPNTFFVNMGRSTNLVEWIGSGMARSKAKLADREAVHLIKKTGWPRFIIETALSRP
Ga0310892_1016414213300031858SoilVSERLFAFRWDVDHRVCATDGLPRIQAACRDFGVPNTFFVNMGRSTNLVEWIGQGTARSKAKLADRDAVHLIKKTGWPRFI
Ga0310893_1041478423300031892SoilVSERLFAFRWDVDHRVCATDGLPRIQAACRDFGVPNTFFVNMGRSTNLVEWIGQGTARSKAKLADRDAVHLIKKTGWPRFILETALSRP
Ga0307406_1082231623300031901RhizosphereVTERLFAFRWDVDHRVCATDGLPKIQAACRDFGVPNTFFVNMGRSTNLVEWIGSGMARSKAKLADR
Ga0307407_1008623613300031903RhizosphereVTERLFAFRWDVDHRVCATDGLPKIRAACRDFGVPNTFFVNMGRSTNLVEWIGSGMARSKAKLADREAVHLIKKTGWPRFIIETAL
Ga0307479_1148556413300031962Hardwood Forest SoilMAEKLFSFRWDIDHRACITDGLPRIMQVCDEFGVKNTFFVNMGRATNLKEWLMKGGLKGSKAKLNDMEAVHLI
Ga0307416_10004204013300032002RhizosphereVTERLFAFRWDVDHRVCATDGLPKIQAACRDFGVPNTFFVNMGRSTNLVEWIGSGMARSKAKLADRESVHLIKKTGWPRFIIETALSRPVGLSFVPLLQSLQAEG
Ga0307416_10200804713300032002RhizosphereVTNRLFAFRWDVDHRVCATDGLPRIRAACRDFGVPNTFFVNMGRSTNLLEWIGSGMARSKAKLA
Ga0307416_10341663823300032002RhizosphereVSERLFSFRWDVDHHVCVTDGLPRILGVCRELGVRNTFFVNMGRSTDLKEWLLGIGKSKAKLTDMSSV
Ga0307414_1021089123300032004RhizosphereVTERLFAFRWDVDHRVCATDGLPKIQAACRDFGVPNTFFVNMGRSTNLVEWIGSGMARSKAKLADRESVH
Ga0307414_1022017113300032004RhizosphereVTDRLFAFRWDVDHRVCVTDGLPRIRAVCRDFGVPNTFFVNLGRSTNLREWLGKGIGRSKAKLADREAVHLIRKTGWRR
Ga0307411_1090907013300032005RhizosphereVTERLFAFRWDVDHRVCATDGLPKIQAACRDFGVPNTFFVNMGRSTNLVEWIGSGMARSKAKLADREAVHLIKKTGWPRFIIETAL
Ga0307415_100003448113300032126RhizosphereVSERLFAFRWDVDHRVCATDGLPRIQAACRDFGVPNTFFVNMGRSTNLVEWIGQGTARSKAKLADRDAVHLIK
Ga0307415_10106498413300032126RhizosphereVSDRLFSFRWDIDHRVCITDGLPRISAVCRDFGVPNTFFVNLGRSTNLREWLGKGIARSKAKLADREAVHLIQ
Ga0307415_10110726113300032126RhizosphereVSERVFAFRWDVDHRVCVTDGLPRIRAVCRDFGVPNTFFVNMGRSTNLREWLGKGVARSKAKLADREAVH
Ga0315283_1076411123300032164SedimentVTSRRLFSFRWDIDHRACITDGVPKIIDVCRRLGVVNTFFVNMGRSTNLREWISKGGLKGSRAKLGDMEAVHLIK
Ga0315276_1194192323300032177SedimentMAIAARLFSFRWDIDHRACITDGVPKIIEVCQRLGVVNTFFVNMGRSTNLREWISKGGLKGSQAKLGDMEAVHLIKKIGWPRFVTETLLAR
Ga0307471_10430867913300032180Hardwood Forest SoilVTDRLFAFRWDVDHRVCATDGLPRIRAVCRDFGVPNTFFVNMGRSTNLLEWIGAGMARSKAKLADREAVHLIKKTGWPRFLIETALSRPVGLSFVPLLQ
Ga0307472_10096379423300032205Hardwood Forest SoilVTDRLFAFRWDVDHRVCITDGLPRIRAVCRDFGVPNTFFVNLGRSTNLREWLGKGITRSKAKLADRDAVHLI
Ga0310811_1126962323300033475SoilVSDRLFSFRWDVDHRVCITDGLPRIAAVCRDFGVPNTFFVNLGRSTNLREWLGRGITRSRAKLADREAVHLIKKTGWPRFLVETALGRPVGLRFVP
Ga0364924_130379_2_2623300033811SedimentVTDRLFVFRWDVDHRVCVTDGLPRIRSVCRDFAVPNTFFVNMGRSTNLREWLGKGMARSRAKLADQDAVHLIQKTGWPRFLLETALA
Ga0364928_0186636_223_5163300033813SedimentVTDRLFVFRWDVDHRVCVTDGLPRIRSVCRDFAVPNTFFVNMGRSTNLREWLGKGMARSRAKLADQDAVHLIQKTGWPRFLLETALARPVGLKFVPVL
Ga0373902_022720_931_11853300034099Sediment SlurryVTRRLFAFRWDVDHRVCITDGIPRIRAVCRELGVPHTFFVNLGRSTNLRAWLGKGFERSREKLSDMEAVHLIQKAGWPRFMLETV
Ga0364934_0006992_3_2003300034178SedimentVTDRLFVFRWDVDHRVCVTDGLPRIRSVCRDFAVPNTFFVNMGRSTNLREWLGKGMVRSKAKLADK

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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