NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F042819

Metagenome / Metatranscriptome Family F042819

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F042819
Family Type Metagenome / Metatranscriptome
Number of Sequences 157
Average Sequence Length 42 residues
Representative Sequence MTWKRVATAAVLIPFVVGIVLWGSTAIVALAVALVTVLALFEY
Number of Associated Samples 121
Number of Associated Scaffolds 157

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 99.35 %
% of genes near scaffold ends (potentially truncated) 98.09 %
% of genes from short scaffolds (< 2000 bps) 89.81 %
Associated GOLD sequencing projects 114
AlphaFold2 3D model prediction Yes
3D model pTM-score0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (91.083 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(36.943 % of family members)
Environment Ontology (ENVO) Unclassified
(36.943 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.675 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 57.75%    β-sheet: 0.00%    Coil/Unstructured: 42.25%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 157 Family Scaffolds
PF01255Prenyltransf 43.31
PF00903Glyoxalase 12.74
PF01433Peptidase_M1 3.18
PF12681Glyoxalase_2 1.91
PF02585PIG-L 1.27
PF07228SpoIIE 1.27
PF04191PEMT 1.27
PF01566Nramp 1.27
PF05163DinB 1.27
PF03551PadR 0.64
PF13462Thioredoxin_4 0.64
PF13493DUF4118 0.64
PF03702AnmK 0.64
PF03544TonB_C 0.64
PF05050Methyltransf_21 0.64
PF01494FAD_binding_3 0.64
PF03448MgtE_N 0.64
PF07883Cupin_2 0.64
PF05973Gp49 0.64
PF01928CYTH 0.64

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 157 Family Scaffolds
COG0020Undecaprenyl pyrophosphate synthaseLipid transport and metabolism [I] 43.31
COG0308Aminopeptidase N, contains DUF3458 domainAmino acid transport and metabolism [E] 3.18
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 1.27
COG1914Mn2+ or Fe2+ transporter, NRAMP familyInorganic ion transport and metabolism [P] 1.27
COG2120N-acetylglucosaminyl deacetylase, LmbE familyCarbohydrate transport and metabolism [G] 1.27
COG2318Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)Secondary metabolites biosynthesis, transport and catabolism [Q] 1.27
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.64
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 0.64
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 0.64
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 0.64
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 0.64
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.64
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.64
COG2239Mg/Co/Ni transporter MgtE (contains CBS domain)Inorganic ion transport and metabolism [P] 0.64
COG23771,6-Anhydro-N-acetylmuramate kinaseCell wall/membrane/envelope biogenesis [M] 0.64
COG3657Putative component of the toxin-antitoxin plasmid stabilization moduleDefense mechanisms [V] 0.64
COG4679Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin systemDefense mechanisms [V] 0.64

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms91.08 %
UnclassifiedrootN/A8.92 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001593|JGI12635J15846_10129157All Organisms → cellular organisms → Bacteria → Acidobacteria1772Open in IMG/M
3300002245|JGIcombinedJ26739_100386962All Organisms → cellular organisms → Bacteria1278Open in IMG/M
3300002914|JGI25617J43924_10224876All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300005176|Ga0066679_10768634All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300005537|Ga0070730_10028043All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4280Open in IMG/M
3300005545|Ga0070695_101346936All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae591Open in IMG/M
3300005554|Ga0066661_10305575All Organisms → cellular organisms → Bacteria979Open in IMG/M
3300005556|Ga0066707_10070225All Organisms → cellular organisms → Bacteria2087Open in IMG/M
3300005560|Ga0066670_10779572All Organisms → cellular organisms → Bacteria → Proteobacteria579Open in IMG/M
3300005568|Ga0066703_10051527All Organisms → cellular organisms → Bacteria2306Open in IMG/M
3300005575|Ga0066702_10537686Not Available707Open in IMG/M
3300006059|Ga0075017_101197526All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium595Open in IMG/M
3300006796|Ga0066665_11308726All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae557Open in IMG/M
3300006804|Ga0079221_11136304All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae601Open in IMG/M
3300007255|Ga0099791_10474257All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300007265|Ga0099794_10070625All Organisms → cellular organisms → Bacteria1710Open in IMG/M
3300009038|Ga0099829_11187266All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300009088|Ga0099830_11583848All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300009088|Ga0099830_11674850All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300009089|Ga0099828_10688881All Organisms → cellular organisms → Bacteria → Acidobacteria918Open in IMG/M
3300009089|Ga0099828_10728227All Organisms → cellular organisms → Bacteria890Open in IMG/M
3300009090|Ga0099827_11378368All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300009101|Ga0105247_10132137All Organisms → cellular organisms → Bacteria1628Open in IMG/M
3300009143|Ga0099792_10772078All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300009635|Ga0116117_1091952All Organisms → cellular organisms → Bacteria → Acidobacteria757Open in IMG/M
3300009839|Ga0116223_10177300All Organisms → cellular organisms → Bacteria1312Open in IMG/M
3300010043|Ga0126380_10989593All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300010046|Ga0126384_10430607All Organisms → cellular organisms → Bacteria1121Open in IMG/M
3300010048|Ga0126373_11343207All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300010048|Ga0126373_12269081Not Available603Open in IMG/M
3300010321|Ga0134067_10280330All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300010358|Ga0126370_11839919Not Available587Open in IMG/M
3300010358|Ga0126370_12666247All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300010362|Ga0126377_11905116All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium670Open in IMG/M
3300010396|Ga0134126_10944573All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300011269|Ga0137392_11249722All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300011270|Ga0137391_10540775All Organisms → cellular organisms → Bacteria982Open in IMG/M
3300011271|Ga0137393_10175256All Organisms → cellular organisms → Bacteria1801Open in IMG/M
3300011271|Ga0137393_10443442All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1113Open in IMG/M
3300011271|Ga0137393_10828425Not Available790Open in IMG/M
3300011271|Ga0137393_11584154All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300011271|Ga0137393_11625836Not Available535Open in IMG/M
3300011271|Ga0137393_11667042All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300012096|Ga0137389_10635947All Organisms → cellular organisms → Bacteria → Acidobacteria917Open in IMG/M
3300012096|Ga0137389_10838468All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300012096|Ga0137389_11034817All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300012096|Ga0137389_11114561All Organisms → cellular organisms → Bacteria → Acidobacteria676Open in IMG/M
3300012189|Ga0137388_10072650All Organisms → cellular organisms → Bacteria2871Open in IMG/M
3300012189|Ga0137388_11180833All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium703Open in IMG/M
3300012203|Ga0137399_11060386All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300012205|Ga0137362_10243348All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1553Open in IMG/M
3300012205|Ga0137362_11164277All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300012207|Ga0137381_10650407All Organisms → cellular organisms → Bacteria → Acidobacteria917Open in IMG/M
3300012210|Ga0137378_11256507All Organisms → cellular organisms → Bacteria → Acidobacteria657Open in IMG/M
3300012351|Ga0137386_11217087All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300012361|Ga0137360_10535705All Organisms → cellular organisms → Bacteria999Open in IMG/M
3300012362|Ga0137361_11728266All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300012685|Ga0137397_10280932Not Available1240Open in IMG/M
3300012685|Ga0137397_10337926All Organisms → cellular organisms → Bacteria1122Open in IMG/M
3300012917|Ga0137395_11236959All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300012918|Ga0137396_10197388All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1479Open in IMG/M
3300012922|Ga0137394_10528592All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1001Open in IMG/M
3300012922|Ga0137394_11206616Not Available620Open in IMG/M
3300012923|Ga0137359_10367914All Organisms → cellular organisms → Bacteria1277Open in IMG/M
3300012923|Ga0137359_10421434All Organisms → cellular organisms → Bacteria1182Open in IMG/M
3300012925|Ga0137419_10640081All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300012925|Ga0137419_11199407All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300012927|Ga0137416_11039806All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300012929|Ga0137404_10492502All Organisms → cellular organisms → Bacteria1093Open in IMG/M
3300012929|Ga0137404_12282105All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300012930|Ga0137407_10667588All Organisms → cellular organisms → Bacteria978Open in IMG/M
3300012944|Ga0137410_11045860All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300012944|Ga0137410_11255726Not Available639Open in IMG/M
3300012977|Ga0134087_10487668All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium618Open in IMG/M
3300015053|Ga0137405_1360816All Organisms → cellular organisms → Bacteria → Acidobacteria3231Open in IMG/M
3300015067|Ga0167640_115003All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300016445|Ga0182038_10546598All Organisms → cellular organisms → Bacteria994Open in IMG/M
3300017927|Ga0187824_10126224All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300017943|Ga0187819_10755502All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300017955|Ga0187817_10218623All Organisms → cellular organisms → Bacteria1214Open in IMG/M
3300018015|Ga0187866_1002323All Organisms → cellular organisms → Bacteria → Acidobacteria15983Open in IMG/M
3300018060|Ga0187765_11381133All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300018088|Ga0187771_10352346All Organisms → cellular organisms → Bacteria1238Open in IMG/M
3300018088|Ga0187771_11121724All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300018431|Ga0066655_10691311All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300018433|Ga0066667_11998099All Organisms → cellular organisms → Bacteria → Acidobacteria533Open in IMG/M
3300018468|Ga0066662_12984612All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300019788|Ga0182028_1247042All Organisms → cellular organisms → Bacteria945Open in IMG/M
3300020199|Ga0179592_10415895All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300020579|Ga0210407_10820943All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300020579|Ga0210407_10991405All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300020581|Ga0210399_10412974All Organisms → cellular organisms → Bacteria1125Open in IMG/M
3300020582|Ga0210395_11183047All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300020583|Ga0210401_10260202All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1595Open in IMG/M
3300021168|Ga0210406_10170770All Organisms → cellular organisms → Bacteria1817Open in IMG/M
3300021170|Ga0210400_10107674All Organisms → cellular organisms → Bacteria2213Open in IMG/M
3300021171|Ga0210405_11169241All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium571Open in IMG/M
3300021178|Ga0210408_10539064All Organisms → cellular organisms → Bacteria926Open in IMG/M
3300021401|Ga0210393_10864958All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300021401|Ga0210393_11272835All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300021404|Ga0210389_10567543All Organisms → cellular organisms → Bacteria892Open in IMG/M
3300021420|Ga0210394_10695515All Organisms → cellular organisms → Bacteria891Open in IMG/M
3300021474|Ga0210390_10468583All Organisms → cellular organisms → Bacteria1062Open in IMG/M
3300021478|Ga0210402_10480190All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1154Open in IMG/M
3300021478|Ga0210402_11464586All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium610Open in IMG/M
3300021559|Ga0210409_11222502All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300021559|Ga0210409_11235545Not Available623Open in IMG/M
3300021559|Ga0210409_11394393All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300024347|Ga0179591_1128154All Organisms → cellular organisms → Bacteria2308Open in IMG/M
3300025900|Ga0207710_10516558All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300025921|Ga0207652_10027017All Organisms → cellular organisms → Bacteria → Acidobacteria4783Open in IMG/M
3300025922|Ga0207646_11547450All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300026291|Ga0209890_10262850All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300026295|Ga0209234_1031535All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2013Open in IMG/M
3300026307|Ga0209469_1130687All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium581Open in IMG/M
3300026317|Ga0209154_1109222All Organisms → cellular organisms → Bacteria1175Open in IMG/M
3300026342|Ga0209057_1218151All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium541Open in IMG/M
3300026532|Ga0209160_1244713All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300026551|Ga0209648_10339815All Organisms → cellular organisms → Bacteria1042Open in IMG/M
3300026551|Ga0209648_10527653All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300027512|Ga0209179_1028782All Organisms → cellular organisms → Bacteria1128Open in IMG/M
3300027643|Ga0209076_1021726All Organisms → cellular organisms → Bacteria1749Open in IMG/M
3300027857|Ga0209166_10708750All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300027867|Ga0209167_10743653All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300027874|Ga0209465_10006345All Organisms → cellular organisms → Bacteria → Acidobacteria5191Open in IMG/M
3300027875|Ga0209283_10605066All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300027884|Ga0209275_10657641All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300027889|Ga0209380_10830479All Organisms → cellular organisms → Bacteria → Acidobacteria522Open in IMG/M
3300027898|Ga0209067_10456778All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium721Open in IMG/M
3300027903|Ga0209488_10991165All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300027911|Ga0209698_11153350All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300028536|Ga0137415_10260240All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1543Open in IMG/M
3300028536|Ga0137415_10381404All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1213Open in IMG/M
3300028536|Ga0137415_10991149Not Available651Open in IMG/M
3300028792|Ga0307504_10004510All Organisms → cellular organisms → Bacteria2839Open in IMG/M
3300028808|Ga0302228_10274122All Organisms → cellular organisms → Bacteria → Acidobacteria758Open in IMG/M
3300030737|Ga0302310_10290301All Organisms → cellular organisms → Bacteria → Acidobacteria923Open in IMG/M
3300030940|Ga0265740_1011881All Organisms → cellular organisms → Bacteria807Open in IMG/M
3300031128|Ga0170823_10674837All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300031446|Ga0170820_14883394All Organisms → cellular organisms → Bacteria952Open in IMG/M
3300031715|Ga0307476_10724276All Organisms → cellular organisms → Bacteria736Open in IMG/M
3300031720|Ga0307469_10587376All Organisms → cellular organisms → Bacteria → Acidobacteria993Open in IMG/M
3300031720|Ga0307469_10731908All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300031753|Ga0307477_10532580All Organisms → cellular organisms → Bacteria → Acidobacteria796Open in IMG/M
3300031912|Ga0306921_11776000All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300031946|Ga0310910_10335825All Organisms → cellular organisms → Bacteria1193Open in IMG/M
3300031947|Ga0310909_10949885Not Available704Open in IMG/M
3300031962|Ga0307479_10083663All Organisms → cellular organisms → Bacteria → Acidobacteria3089Open in IMG/M
3300031962|Ga0307479_10148615All Organisms → cellular organisms → Bacteria2297Open in IMG/M
3300031962|Ga0307479_12037254All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300032174|Ga0307470_11031925All Organisms → cellular organisms → Bacteria → Acidobacteria656Open in IMG/M
3300032174|Ga0307470_11482550All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300032180|Ga0307471_100524659Not Available1335Open in IMG/M
3300032180|Ga0307471_101452876All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300032180|Ga0307471_103457280All Organisms → cellular organisms → Bacteria559Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil36.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil13.38%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil7.64%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.01%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.10%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.46%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.91%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.91%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.91%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.27%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.27%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.27%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.27%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.27%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.27%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.27%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.27%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.64%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.64%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.64%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.64%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.64%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.64%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.64%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.64%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.64%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.64%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009635Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10EnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015067Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G7A, Adjacent to main proglacial river, mid transect (Watson river))EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017927Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300018015Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150EnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019788Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300024347Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026291Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)EnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027512Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028808Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2EnvironmentalOpen in IMG/M
3300030737Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2EnvironmentalOpen in IMG/M
3300030940Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12635J15846_1012915743300001593Forest SoilMTWKRVATAVVLIPFVVGLVVWGSTAIVALAVALVTLL
JGIcombinedJ26739_10038696233300002245Forest SoilMTWKRVATAAVLXPVVVGLVLWGSTIVVALVLALVMLLALFEYFALG
JGI25617J43924_1022487623300002914Grasslands SoilMTWKRVATAAVLIPFVVGIVLWGSTAIVALAVALVTVLALFEY
Ga0066679_1076863423300005176SoilMTWKRVATAAVLIPFVVSLVVRGSTAIVALAVALVTLLALFEYFALG
Ga0070730_1002804313300005537Surface SoilMTWKRVATAVVLIPGVVALILLGSTALVAIGMALVILLALFEFFTLG
Ga0070695_10134693613300005545Corn, Switchgrass And Miscanthus RhizosphereMTWKRVATAVVLIPCVVGLVLWGSTAVVALGIALVITLALFEYFAL
Ga0066661_1030557513300005554SoilMTWKRVATAVVLIPFVVGIVLWGSTAILALAVGLVTMLALFEYF
Ga0066707_1007022513300005556SoilMTWKRVATAALLIPFAVGLALWSSTAVLALALALVVMIAL
Ga0066670_1077957223300005560SoilMTWKRVATAVVLIPFVVGIVLWGSTAILALAVGLVT
Ga0066703_1005152723300005568SoilMTWKRVATAVVLIPFVVGIVLRGSTAILALAVGLVTMLALF
Ga0066702_1053768613300005575SoilMTWKRVATAAVLIPIVVGIVLWGSTAVMALALALVIPLALFEYFALGEAI
Ga0075017_10119752623300006059WatershedsMTWKRVATAAVLIPFAVGIVLWGSTAVLALAVALVTLLALFEY
Ga0066665_1130872613300006796SoilMTWKRVLTAAVLVPAVVLLVFEASTAVVSLAVALVMLF
Ga0079221_1113630423300006804Agricultural SoilMTWKRVATAVVLIPAVVGLVVWGSTAWVALALALIILVALFEYFSLGDAIG
Ga0099791_1047425713300007255Vadose Zone SoilMTWKRVATAVVLIPAVVALIVKGSTALVALALALVIL
Ga0099794_1007062513300007265Vadose Zone SoilMTWKRVVTAAVLIPFVVGLVLWGSTAILALGVALVVMLAMFEYFA
Ga0099829_1118726613300009038Vadose Zone SoilMTWKRVATAVVLIPSVVGIVLWGSTAIVALAVGLVTLL
Ga0099830_1158384813300009088Vadose Zone SoilMTWKRVATAAVLIPFVVGVVLWGSTAVMALAVALVT
Ga0099830_1167485013300009088Vadose Zone SoilMTWKRVATAAVLIPFVVGIVLWGSTAWVALALALIILL
Ga0099828_1068888123300009089Vadose Zone SoilMTWKRVATAGVLIPFAVGIVLWGSTALLAVTVALVTLLA
Ga0099828_1072822713300009089Vadose Zone SoilMTWKRVATAVVLMPFVVGLVLWGSTAWVALALALIIVLAL
Ga0099827_1137836823300009090Vadose Zone SoilMTWKRVATAAVLIPFVVGIVLWGSTAIVALAVGLVTVLALFEYFALGEAI
Ga0105247_1013213713300009101Switchgrass RhizosphereMTWKRVATAVVLIPFVVGLVLFAATAWVAAALGVVTILAMVEYFSLGDA
Ga0099792_1077207813300009143Vadose Zone SoilMTWKRVATAGVLIPFVVGIVLWGSTAIVALAVGLVTLLALFEYFNL
Ga0116117_109195223300009635PeatlandMTWKRVVTAVVLIPFVVGLVLYGSTLLVAAGTGVFMVLAL
Ga0116223_1017730023300009839Peatlands SoilMTWKRVGTAVVLMPVVIALVLWGSTTVVAVAVAVLT
Ga0126380_1098959313300010043Tropical Forest SoilMTWKRVATAVVLIPGVVALSLKGSTALVAIGMALVILLALFEFFALG
Ga0126384_1043060713300010046Tropical Forest SoilMTWKRVATAVVLIPSVVALILLESTAFVAIGMALVILLGLFEFF
Ga0126384_1070326013300010046Tropical Forest SoilMTWKRVATALVLIPVVVGLVLFTPTWVVAMATAAITVRALGIFRPRRRH
Ga0126373_1134320713300010048Tropical Forest SoilMTWQRVATALVLVPLVVGVVLWGSTALVSMAIALVTLLA
Ga0126373_1226908123300010048Tropical Forest SoilVTWKRVATAIVLIPLVVGLVLWASTAIVSIAIALVTLL
Ga0134067_1028033023300010321Grasslands SoilMTWKRVATAVALVPLVVSLVLWGSTATVSLGVALVTLLALFE
Ga0126370_1183991913300010358Tropical Forest SoilMTWKRAATAVVLTPLVVGLVLWGSTAVVSMAVALVTLLALFEYFALG
Ga0126370_1266624723300010358Tropical Forest SoilMTWKRVATAAVLIPVVVGLVGYAPTSWMAIALTLVMLLALFEYFA
Ga0126377_1190511623300010362Tropical Forest SoilVTWKRVATAAILIPVVVALVLWGSTAVVAIAVALFTM
Ga0134126_1094457313300010396Terrestrial SoilMTWKRVATAVVLIPFVVGLVLFAATAWVAAALGVVTILAMVEYFSLGD
Ga0137392_1124972223300011269Vadose Zone SoilMTWKRVATAAVLIPFVVGIVLWGSTAWVALALALIILLALF
Ga0137391_1054077533300011270Vadose Zone SoilMTWKRVATAAVLIPFAVGIVLLGSTAIVALAVGLVTML
Ga0137393_1017525613300011271Vadose Zone SoilMTWKRVATAAVLIPFVVGIVLWGSTAVMALAVALVTLLALFEYFA
Ga0137393_1044344233300011271Vadose Zone SoilMTWKRVATAAVLIPFAVGIVLWGSTALLALAVALVTLLALFEY
Ga0137393_1082842513300011271Vadose Zone SoilMTWKRVATAGVLIPFVVGIVLWGSTAIVALAVGLVTLLALFEYFT
Ga0137393_1158415423300011271Vadose Zone SoilMTWKRVATAAVLIPFAVGIVLWGSTAIVALAVGLV
Ga0137393_1162583613300011271Vadose Zone SoilMTWKRVATAVVLIPCVVGLVLWASTAIVALAVGLVTVLALFEY
Ga0137393_1166704213300011271Vadose Zone SoilMTWTRVATAAVLIPFVVGMVLWGSTAWVALALALIILLALFEYFALGDAIG
Ga0137389_1063594713300012096Vadose Zone SoilMTWKRVATAAVLIPFAVGLVLWGSTAIVALAVGLVTL
Ga0137389_1083846823300012096Vadose Zone SoilMTWKRVATAAVLIPFAVGIVLWGSTAIVALAVALVTLLALFEYFALG
Ga0137389_1103481723300012096Vadose Zone SoilMTWKRVATGAVLIPVVVGLVLWGSTAIVALATALVMLLALFEYF
Ga0137389_1111456123300012096Vadose Zone SoilMTWKRVATAVVLIPCVVGLVLWASTAIVALAVGLVTVLALFE*
Ga0137388_1007265033300012189Vadose Zone SoilMTWKRVVTAAVLIPFVVGLVLWGSTAILALGVALVVLLAMFEYFA
Ga0137388_1118083323300012189Vadose Zone SoilMTWKRVATAVVLIPIAVGLVLWGSTALVSLAIALVT
Ga0137399_1106038613300012203Vadose Zone SoilMTWKRVATAVVLIPFVVGLVLWASTAWVALALALI
Ga0137362_1024334813300012205Vadose Zone SoilMTWKRVATAAVLIPFAVGIVLWGSTALLALVVALVTLLA
Ga0137362_1116427723300012205Vadose Zone SoilMTLKRVATAAVLIPFVVGLVLFGSTNWVAVALALVTVLAL
Ga0137380_1006552743300012206Vadose Zone SoilMTWKRVATAAVLIPFAVGLVLWGSTALLALASLVDNRCQI*
Ga0137381_1065040713300012207Vadose Zone SoilMTWKRVATAAVLIPFAVGLVLWGSTALLGLAVALVTLLALFEYFS
Ga0137378_1125650733300012210Vadose Zone SoilMTWKRVATAVVLVPFAVGLVLWGSTAMVSIAVALVTLLALFEYF
Ga0137386_1121708713300012351Vadose Zone SoilMTWKRVATAAVLIPFAVGLVLWGSTALLALAVALVTLLAL
Ga0137360_1053570513300012361Vadose Zone SoilMTWKRVVTAALLIPFVVGLVLWGSTAILSLGVALVVML
Ga0137361_1172826613300012362Vadose Zone SoilMTWKRVATAGVLIPFAVGLILWGSTALLALAMALVTLFALFEYF
Ga0137397_1028093213300012685Vadose Zone SoilMTWKRVVTAAVLIPFVVGLVLWGSTAILSLGVALVVMLAMFEYFALGDAI
Ga0137397_1033792623300012685Vadose Zone SoilMTWTRVATAAVLIPFVVGLVVWGSTAWVALALALVVVL
Ga0137395_1123695913300012917Vadose Zone SoilMTWKRVATAAVLIPCVVGLVLGAPTALVAVALALVILLA
Ga0137396_1019738823300012918Vadose Zone SoilMTWKRVATAAVLIPLAVGLVLRGSTALLTLAVALVTMLALFEYFALGEA
Ga0137394_1052859213300012922Vadose Zone SoilMTWKRVVTAAVLIPFVVGLVLWGSTAILALGVALV
Ga0137394_1120661613300012922Vadose Zone SoilMTWKRVVTAAVLIPFVVGLVLWGSTAILALGVALVVMLAMFEYF
Ga0137359_1036791413300012923Vadose Zone SoilMTWKRVVTAAVLIPFVVGLVLWGSTAILALGVALVV
Ga0137359_1042143413300012923Vadose Zone SoilMTWKRVATAVVLIPFVVGLVLWGSTAWVALVLALII
Ga0137419_1064008113300012925Vadose Zone SoilMTWTRVATAAVLIPFVVGLVVWGSTAWVALALALVV
Ga0137419_1119940723300012925Vadose Zone SoilMTWKRVVTAAVLIPFAVGIVLWGSTALLALAVALVTMLALFEYFALGEA
Ga0137416_1103980613300012927Vadose Zone SoilMTWKRVATAVVLIPFVVGLVVWGSTAIVALAVALVTLLALFEYFA
Ga0137404_1049250213300012929Vadose Zone SoilMTWKRVVTAAVLIPFVVGLVLWGSTALLALGVALVVML
Ga0137404_1228210513300012929Vadose Zone SoilMTWKRVATAVVLIPFVVGLVVWGSTAIVALAVGLVTLVALFEYFALGEAIGH
Ga0137407_1066758813300012930Vadose Zone SoilMTWKRVVTAAVLIPFAVGIVLWGSTAVLALAVALVT
Ga0137410_1104586023300012944Vadose Zone SoilMTWKRVATAVVLIPFVVGIVLWGSTAIVALAVGLVTVLALFEYF
Ga0137410_1125572613300012944Vadose Zone SoilMTWKRVVTAAVLIPFVVGLVLWGSTAILALGLALVVM
Ga0134087_1048766813300012977Grasslands SoilMTWKRVATAVVLIPFVVGIVLWGSTALLALAVALVT
Ga0137405_136081613300015053Vadose Zone SoilVWATAAVLIPFVVGLVVWGSTAWVALALALVVVLALFEY
Ga0167640_11500323300015067Glacier Forefield SoilMTWKRVATAAVLIPIVVALVLFASTGGVAIALSIIIVLALFEYFSLGDAI
Ga0182038_1054659813300016445SoilMTWKRVATAVILIPVVVGLVLLAPPSWLAIVLALL
Ga0187824_1012622413300017927Freshwater SedimentMTWKRIATAVVLIPCVIGLVLWGSTAVVALCLALVML
Ga0187819_1075550213300017943Freshwater SedimentMTWKRVATAAVLIPFVVGLVLWGSTALVALVTALVI
Ga0187817_1021862323300017955Freshwater SedimentMMWKRVATAVVLMPLVVGLVLWASTAVVAVAVAALT
Ga0187866_100232313300018015PeatlandMTWKRVATAAVLMPVVIGLVLWGSTTVVAVAVAVLT
Ga0187765_1138113313300018060Tropical PeatlandMTWKRVATAVVLIPLVVGIVLYGSTAWVAVALGLVT
Ga0187771_1035234613300018088Tropical PeatlandMMWKRVATAVVLMPVAIALVLWGSTTVVAAAVAALTAV
Ga0187771_1112172423300018088Tropical PeatlandMMWKRVATAVVLMPLVVVLVLWGSTLVLAAAVAALAA
Ga0066655_1069131123300018431Grasslands SoilMTWKRVATAAVLIPFVVGIVLWGSTAILALAVGLVTMLALF
Ga0066667_1199809913300018433Grasslands SoilMTWKRVATAVVLVPFAVGLVLWGSTAIVSIAVALVTLLALF
Ga0066662_1298461223300018468Grasslands SoilMTWKRVATAVVLIPFVVGIVLWGSTALLALAVALVTMLALFEYFALG
Ga0182028_124704223300019788FenMTWKRVATAVVLMPVVIGLVLWGSTTVVAVAVAVL
Ga0179592_1041589523300020199Vadose Zone SoilMTLKRVATAAVLIPFVVGLVLFGSTNWVAVALALVTVLALHEFFALGDAI
Ga0210407_1082094323300020579SoilMTWKRVATAVVLIPCVVGLVLWGSAAVLAVGLAFVILLALFEYFA
Ga0210407_1099140523300020579SoilMTWKRVATAVVLIPCVVGLVLWGSTAVLAVGVALVTVLALFE
Ga0210399_1041297423300020581SoilMTWKRVATAAVLIPCVVGLVLWGSTAAMAIGVAFVILLALFEYFALGDAIGH
Ga0210395_1118304723300020582SoilMTWKRVATAAVLIPFAVGLVLWGSTAMVALAVGLLTLLAL
Ga0210401_1026020233300020583SoilMTWKRIATAAVLIPCVVGLVLWGSTAFVAIGTALVVLIALFEFFALGDA
Ga0210406_1017077013300021168SoilMTWKRVLTAAVLIPFAVGIVFWGSTALLALAVALVTM
Ga0210400_1010767423300021170SoilMTWKRVATAAVLIPFVVGLVVWGSTAIVALAVALVTL
Ga0210405_1116924113300021171SoilMTWKRVATAAVLIPFAVGIVLWGSTAVLALVVGLVTLLALFEYF
Ga0210408_1053906413300021178SoilMTWKRVATAVILIPFVVGLVLWGSTAWVALALALITVMALF
Ga0210393_1086495813300021401SoilMTWKRVATAAVLIPFVVGLVLLGSTAWVAAGTALIV
Ga0210393_1127283513300021401SoilMTWKRVATAAVLIPCVVGLVLWGSTAVVAIATAFVI
Ga0210389_1056754323300021404SoilMTWKRVATAVVLIPFVVGLVLYASTAWVAVALAAIIALAMIEYFALG
Ga0210394_1069551523300021420SoilMTWKRVATAVVLIPCVVGLVLWGSTGVLAAGLAFVILLALF
Ga0210390_1046858323300021474SoilMTWKRVATAAVLIPCVVGLVLWGSTAAVTIGTALVIL
Ga0210402_1048019023300021478SoilMTWKRVATAAVLIPFAVGLVLWGSTAIVALVVGLVMML
Ga0210402_1146458613300021478SoilMTWKRVATAAVLIPFAVGLVLWGSTAIVALATALVTLVALFEYFAL
Ga0210409_1122250223300021559SoilMTWKRVATAVVLIPCVVGLVLWGSTAVLAVGLTFVILLALFEYFALG
Ga0210409_1123554523300021559SoilMTWKRVATAAVLIPFVVGLVLWGSTAIVALATALVSMLALFEYF
Ga0210409_1139439323300021559SoilMTWKRVATAAALIPLAVGLVLWGSTAVLALAVALVTLLALFEYF
Ga0179591_112815433300024347Vadose Zone SoilMTWKRVVTAAVLIPFAVGIVLWGSTAVLALAVALVTMLALFE
Ga0207710_1051655823300025900Switchgrass RhizosphereMTWKRVATAVVLIPFVVGLVLFAATAWVAAALGVVTILA
Ga0207652_1002701753300025921Corn RhizosphereMTWKRVATAVVLIPCVIGLVLWGSTAVVALGLALVIALALFEYFA
Ga0207646_1154745023300025922Corn, Switchgrass And Miscanthus RhizosphereMTWKRVATAVVLIPCVIGLVLWGSTAVVALGLALVIALALFEYFALGDA
Ga0209890_1026285013300026291SoilMTWKRVATAAVLIPFVVGLVLFGSTNWVAVALALVVLL
Ga0209234_103153523300026295Grasslands SoilMTWKRVATAVVLIPFVVGIVLWGSTAILALAVGLVTLLALFEYFTLG
Ga0209469_113068713300026307SoilMTWKRVATAVVLVPFAVGLLLWGSTAIVSIAVALVTLLALFEYFA
Ga0209154_110922213300026317SoilMTWKRVATAVVLIPFVVGIVLWGSTAILALAVGLVTMLALFEYFA
Ga0209057_121815113300026342SoilMTWKRVATAVVLIPFVVGIVLWGSTAILALAVGLVTMLALFEYFALGDA
Ga0209160_124471323300026532SoilMTWKRVATAAVLIPFVVGIVLRGSTAIVALAVGLVTMVA
Ga0209648_1033981523300026551Grasslands SoilMTWKRVATAAVLIPCVVGLVLGAPTALVAVALALVI
Ga0209648_1052765323300026551Grasslands SoilMTWTRVATAAVLIPFVVGIVLWGSTAWVALALALIILLALFEYFA
Ga0209179_102878213300027512Vadose Zone SoilMTWTRVATAAVLIPFVVGLVVWGSTAWVALALALVVVLAL
Ga0209076_102172633300027643Vadose Zone SoilMTWKRVATAAVLIPFVVGIVLWGSTAVMALAVALV
Ga0209166_1070875013300027857Surface SoilMTWKRVATAVVLIPGVVALILLGSTALVAIGMALVILLALFEFFTLGTPLGTVP
Ga0209167_1074365323300027867Surface SoilMTWKRVATAAVLIPFVVGLVLFGSTAWVAAGTALIVVLALREYFGLGDAI
Ga0209465_1000634513300027874Tropical Forest SoilMTWKRVSTAVVLVPVAVGLVLWGSTAIVAIAVALITLLALFE
Ga0209283_1060506613300027875Vadose Zone SoilMTWKRVATAAVLIPVVVGLVVWGSTAIVALAVALVTL
Ga0209275_1065764113300027884SoilMTWKRVATAVVLIPFVVGLVLYASTAVVAVALAAI
Ga0209380_1083047923300027889SoilMTWKRVVTAAVLIPLVVGLVLYGATWVVALGVSVFI
Ga0209067_1045677823300027898WatershedsMTWKRVATAAVLIPFAVGIVLWGSTAVLALAVALVTLL
Ga0209488_1099116523300027903Vadose Zone SoilMTWTRVATAAVLIPFVVGLVVWGSTAWVALALALVVVLALFEYFSL
Ga0209698_1115335013300027911WatershedsMIWKRLATAAVLIPVVVGMVLKASTGILAIGTALVMLLALFEYFA
Ga0137415_1026024033300028536Vadose Zone SoilMTWKRVATAAALIPFAVGLALWSSTAVLALALALVVMIALF
Ga0137415_1038140413300028536Vadose Zone SoilMTWKRVATAAVLIPFAVGIVLWGSTALLTLAVALVTMLALFEYFALGEAI
Ga0137415_1099114923300028536Vadose Zone SoilMTWKRVVTAAVLIPFVVGLVLWGTTAILALGVALVVRL
Ga0307504_1000451043300028792SoilMTWKRVATAVVLIPFVVGLVLWASTAWVALALALIIVLALFEYFAL
Ga0302228_1027412223300028808PalsaMTWKRVATAVVLIPFVVGLVLWGSTLVVAVATGVFMVLALLEYFALG
Ga0302310_1029030123300030737PalsaMTWKRVATAVVLIPFVVGLVLWGSTLVVAVATGVFMVLA
Ga0265740_101188113300030940SoilMTWKRVATAVVLIPCVVGLVLWGSTAVVAIALALVILLALFEFFTL
Ga0170823_1067483723300031128Forest SoilMTWKRVATAAVLIPCVVGLVLGAPTALVAVAVALVILLATFEYFSLGEAI
Ga0170820_1488339413300031446Forest SoilMTWKRVATAAVLIPCVVGLVLGAPTALVAVAVALVILL
Ga0307476_1072427623300031715Hardwood Forest SoilMTWKRVATAGVLIPFAVGIVLWGSTAVLALVVALVTL
Ga0307469_1058737633300031720Hardwood Forest SoilMTWKRVATAVVLIPIVVGLVLWCATAWVALAMGLIIVL
Ga0307469_1073190813300031720Hardwood Forest SoilMTWKRVATAVVLVPGVVALIFLESTAMVALGMALVILLSLFEFFALGD
Ga0307477_1053258013300031753Hardwood Forest SoilMTWKRVATAAVLIPFVVGIVLWASTAWMAVVLALIIVLALFEYFA
Ga0306921_1177600023300031912SoilMTWKRAATAAVLVPVVVDLVLWGSTAIVAIALITLLALQTKALNFEEQR
Ga0310910_1033582523300031946SoilMTWKRVATAIVLIPGVVALVSAAPTSWLAIVLALIILLALFEYFALGDAI
Ga0310909_1094988523300031947SoilMTWKRAATAAVLVPVVVDLVLWGSTAIVAIALITLLALQTKA
Ga0307479_1008366343300031962Hardwood Forest SoilMTWKRVATAVVLIPFVVGLVAAAPTSWVTIAVALVVLLALFEFFALGNAIGH
Ga0307479_1014861533300031962Hardwood Forest SoilMTWKRVATAAVLIPFVVGIVLWGSTAIMALAVGLVTLLALFEYF
Ga0307479_1203725413300031962Hardwood Forest SoilMTWKRVATAVVLIPFVVGLVLFGSTAWVAVVLALIVALALWEYF
Ga0307470_1103192523300032174Hardwood Forest SoilMTWKRVATAVVLIPFVVGLVLWGSTAWVALVLALI
Ga0307470_1148255023300032174Hardwood Forest SoilMTWKRVATAAVLMPVVLGLVLLASTAWVALALAVVT
Ga0307471_10052465913300032180Hardwood Forest SoilMTWKRVVTAAVLIPFVVGLVLWGSTAILALGVSLVVMLA
Ga0307471_10145287613300032180Hardwood Forest SoilMTRKRVVTAAVLIPFVVGLVLRGSTAILALGVALVVMLAMFEY
Ga0307471_10345728023300032180Hardwood Forest SoilMTWKRVATAMVLIPVVVGLVVWGSTAWVALALALVVVLALFE

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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