Metagenome Family F042975

Basic Information
Family ID	F042975
Family Type	Metagenome
Number of Sequences	157
Average Sequence Length	48 residues
Representative Sequence	GALDEARALAERYAAAARADLMAFERSPYREALEALPDFILARDH
Number of Associated Samples	139
Number of Associated Scaffolds	157

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	91.72 %
Associated GOLD sequencing projects	133
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Most Common Taxonomy
Group	Bacteria (71.975 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (9.554 % of family members)
Environment Ontology (ENVO)	Unclassified (31.847 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (31.847 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.32% β-sheet: 0.00% Coil/Unstructured: 50.68%
Feature Viewer

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Pfam ID	Name	% Frequency in 157 Family Scaffolds
PF01653	DNA_ligase_aden	59.24
PF12826	HHH_2	5.73
PF03120	DNA_ligase_OB	4.46
PF00144	Beta-lactamase	3.82
PF14520	HHH_5	1.91
PF00072	Response_reg	0.64
PF12796	Ank_2	0.64
PF00596	Aldolase_II	0.64
PF09363	XFP_C	0.64
PF01548	DEDD_Tnp_IS110	0.64
PF04014	MazE_antitoxin	0.64
PF14684	Tricorn_C1	0.64
PF04264	YceI	0.64
PF14534	DUF4440	0.64
PF13365	Trypsin_2	0.64
PF13516	LRR_6	0.64
PF05433	Rick_17kDa_Anti	0.64
PF13361	UvrD_C	0.64

COG ID	Name	Functional Category	% Frequency in 157 Family Scaffolds
COG0272	NAD-dependent DNA ligase	Replication, recombination and repair [L]	63.69
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	3.82
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	3.82
COG2367	Beta-lactamase class A	Defense mechanisms [V]	3.82
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.64
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.64

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.25 %
Unclassified	root	N/A	26.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.25 %
Unclassified	root	N/A	26.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.97 %
Unclassified	root	N/A	26.75 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.75 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	13.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.10 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.18 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.27 %
Candidatus Thermoplasmatota	phylum	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota	1.27 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.75 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.83 %
Thermoplasmata	class	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata	1.27 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.27 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.27 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.64 %
Thermoanaerobaculia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia	0.64 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.64 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.64 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.64 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.64 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.64 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.83 %
Thermoplasmatales	order	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales	1.27 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.27 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.64 %
Thermoanaerobaculales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales	0.64 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.64 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.64 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.64 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.64 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.64 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.64 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.83 %
unclassified Thermoplasmatales	no rank	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales → unclassified Thermoplasmatales	1.27 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.27 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.64 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.64 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.64 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.64 %
Thermoanaerobaculales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales	0.64 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.64 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.64 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.64 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.83 %
Thermoplasmatales archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales → unclassified Thermoplasmatales → Thermoplasmatales archaeon	1.27 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.27 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.64 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	0.64 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.64 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.64 %
Thermoanaerobaculales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales	0.64 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.64 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.64 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.64 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.83 %
Thermoplasmatales archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales → unclassified Thermoplasmatales → Thermoplasmatales archaeon	1.27 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.27 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.64 %
Lysobacter capsici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter capsici	0.64 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.64 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.64 %
Thermoanaerobaculales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales	0.64 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.64 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.64 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.64 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.83 %
Thermoplasmatales archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales → unclassified Thermoplasmatales → Thermoplasmatales archaeon	1.27 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.27 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.64 %
Lysobacter capsici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter capsici	0.64 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.64 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.64 %
Thermoanaerobaculales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales	0.64 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.64 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.64 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.64 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_115056451	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300001213\|JGIcombinedJ13530_106545522	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300003989\|Ga0055473_10287431	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300003994\|Ga0055435_10094808	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300004007\|Ga0055476_10190585	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300004011\|Ga0055460_10141934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	716	Open in IMG/M
3300004065\|Ga0055481_10462694	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300004114\|Ga0062593_100492848	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300004146\|Ga0055495_10160688	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300005330\|Ga0070690_100321619	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300005332\|Ga0066388_100064278	All Organisms → cellular organisms → Bacteria → Proteobacteria	3923	Open in IMG/M
3300005334\|Ga0068869_100049230	All Organisms → cellular organisms → Bacteria	3050	Open in IMG/M
3300005343\|Ga0070687_101155227	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300005355\|Ga0070671_100949266	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300005445\|Ga0070708_100897962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	832	Open in IMG/M
3300005446\|Ga0066686_10661039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	709	Open in IMG/M
3300005471\|Ga0070698_100865306	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300005544\|Ga0070686_101042744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300005545\|Ga0070695_100782937	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300005546\|Ga0070696_100980913	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300005552\|Ga0066701_10681171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300005569\|Ga0066705_10932944	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300005615\|Ga0070702_100198600	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300005764\|Ga0066903_107364920	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300005830\|Ga0074473_11109876	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300005833\|Ga0074472_11331425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1445	Open in IMG/M
3300005836\|Ga0074470_10422762	Not Available	565	Open in IMG/M
3300005842\|Ga0068858_101146057	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300005842\|Ga0068858_101576009	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300006186\|Ga0075369_10403279	All Organisms → cellular organisms → Bacteria → Proteobacteria	645	Open in IMG/M
3300006237\|Ga0097621_100693597	All Organisms → cellular organisms → Bacteria → Proteobacteria	937	Open in IMG/M
3300006796\|Ga0066665_10271206	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300006844\|Ga0075428_100259426	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300006844\|Ga0075428_102644396	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300006845\|Ga0075421_100854515	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300006845\|Ga0075421_100935117	All Organisms → cellular organisms → Bacteria → Proteobacteria	986	Open in IMG/M
3300006846\|Ga0075430_101095621	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300006854\|Ga0075425_102254469	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300006871\|Ga0075434_100169022	All Organisms → cellular organisms → Bacteria	2206	Open in IMG/M
3300006880\|Ga0075429_100129499	All Organisms → cellular organisms → Bacteria	2207	Open in IMG/M
3300007076\|Ga0075435_100039829	All Organisms → cellular organisms → Bacteria	3751	Open in IMG/M
3300007255\|Ga0099791_10671334	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300009012\|Ga0066710_100141212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3329	Open in IMG/M
3300009012\|Ga0066710_101330232	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300009012\|Ga0066710_102329606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300009038\|Ga0099829_10961716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300009090\|Ga0099827_10802972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300009090\|Ga0099827_11039939	All Organisms → cellular organisms → Bacteria → PVC group	711	Open in IMG/M
3300009091\|Ga0102851_12471145	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300009094\|Ga0111539_13293021	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300009111\|Ga0115026_11955692	Not Available	501	Open in IMG/M
3300009131\|Ga0115027_11687829	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300009146\|Ga0105091_10203067	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300009162\|Ga0075423_10307781	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300009455\|Ga0114939_10130361	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300009506\|Ga0118657_10188411	All Organisms → cellular organisms → Bacteria	2887	Open in IMG/M
3300009609\|Ga0105347_1098078	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300009792\|Ga0126374_10745681	Not Available	742	Open in IMG/M
3300009799\|Ga0105075_1028176	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales → unclassified Thermoplasmatales → Thermoplasmatales archaeon	629	Open in IMG/M
3300009822\|Ga0105066_1083044	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300010337\|Ga0134062_10690126	Not Available	535	Open in IMG/M
3300010360\|Ga0126372_11686483	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300010397\|Ga0134124_12667890	Not Available	543	Open in IMG/M
3300010399\|Ga0134127_12277410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter capsici	621	Open in IMG/M
3300010399\|Ga0134127_13653485	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	505	Open in IMG/M
3300010400\|Ga0134122_11687256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300010401\|Ga0134121_11024197	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300010401\|Ga0134121_12442100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300010412\|Ga0136852_11082661	Not Available	762	Open in IMG/M
3300011443\|Ga0137457_1347634	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300012096\|Ga0137389_10130948	All Organisms → cellular organisms → Bacteria	2033	Open in IMG/M
3300012202\|Ga0137363_11271402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300012362\|Ga0137361_10902063	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300012532\|Ga0137373_10117555	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	2294	Open in IMG/M
3300012685\|Ga0137397_11115142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300012918\|Ga0137396_10411139	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300012922\|Ga0137394_10595581	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300012931\|Ga0153915_12017784	Not Available	675	Open in IMG/M
3300014311\|Ga0075322_1120106	Not Available	627	Open in IMG/M
3300014325\|Ga0163163_12690574	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300014881\|Ga0180094_1158543	Not Available	530	Open in IMG/M
3300014881\|Ga0180094_1166144	Not Available	517	Open in IMG/M
3300015077\|Ga0173483_10773412	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300015253\|Ga0180081_1060662	Not Available	664	Open in IMG/M
3300015259\|Ga0180085_1233346	Not Available	543	Open in IMG/M
3300015371\|Ga0132258_11117475	Not Available	1992	Open in IMG/M
3300015371\|Ga0132258_11923889	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1489	Open in IMG/M
3300015371\|Ga0132258_13500293	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300017959\|Ga0187779_10356656	Not Available	946	Open in IMG/M
3300017997\|Ga0184610_1264077	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales → unclassified Thermoplasmatales → Thermoplasmatales archaeon	571	Open in IMG/M
3300018058\|Ga0187766_11484896	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300018063\|Ga0184637_10418755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300018064\|Ga0187773_10021287	All Organisms → cellular organisms → Bacteria	2782	Open in IMG/M
3300018083\|Ga0184628_10405666	Not Available	712	Open in IMG/M
3300018084\|Ga0184629_10316340	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300018089\|Ga0187774_11091238	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	564	Open in IMG/M
3300018468\|Ga0066662_12909005	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300019487\|Ga0187893_10789508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300021090\|Ga0210377_10542795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300022221\|Ga0224506_10106903	Not Available	1344	Open in IMG/M
3300025318\|Ga0209519_10215914	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300025324\|Ga0209640_10273569	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300025327\|Ga0209751_10908357	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300025551\|Ga0210131_1086270	Not Available	539	Open in IMG/M
3300025923\|Ga0207681_10900367	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	741	Open in IMG/M
3300025935\|Ga0207709_10996023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300025938\|Ga0207704_10934470	Not Available	731	Open in IMG/M
3300025940\|Ga0207691_11274064	Not Available	608	Open in IMG/M
3300025960\|Ga0207651_10987653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300025981\|Ga0207640_10220982	Not Available	1450	Open in IMG/M
3300026041\|Ga0207639_11622108	Not Available	607	Open in IMG/M
3300026075\|Ga0207708_11162935	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300026530\|Ga0209807_1335267	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300026538\|Ga0209056_10055797	All Organisms → cellular organisms → Bacteria	3497	Open in IMG/M
3300026540\|Ga0209376_1034472	All Organisms → cellular organisms → Bacteria	3115	Open in IMG/M
3300026548\|Ga0209161_10353371	Not Available	658	Open in IMG/M
3300027675\|Ga0209077_1145855	Not Available	660	Open in IMG/M
3300027843\|Ga0209798_10524168	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300027869\|Ga0209579_10100063	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300027907\|Ga0207428_11145324	Not Available	542	Open in IMG/M
3300027909\|Ga0209382_11201574	Not Available	775	Open in IMG/M
3300029987\|Ga0311334_11093465	All Organisms → cellular organisms → Bacteria → PVC group	666	Open in IMG/M
3300029989\|Ga0311365_11296667	Not Available	627	Open in IMG/M
3300030620\|Ga0302046_10792286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	763	Open in IMG/M
3300030838\|Ga0311335_10406300	Not Available	937	Open in IMG/M
3300030838\|Ga0311335_11138277	Not Available	559	Open in IMG/M
3300031847\|Ga0310907_10444527	Not Available	684	Open in IMG/M
3300031873\|Ga0315297_11730508	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300031949\|Ga0214473_11311929	Not Available	742	Open in IMG/M
3300031997\|Ga0315278_11557942	Not Available	634	Open in IMG/M
3300032005\|Ga0307411_12154685	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300032017\|Ga0310899_10326876	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300032174\|Ga0307470_10370725	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300032258\|Ga0316191_11346472	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300032276\|Ga0316188_10121958	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300032397\|Ga0315287_11801219	Not Available	681	Open in IMG/M
3300032770\|Ga0335085_10862237	Not Available	991	Open in IMG/M
3300033158\|Ga0335077_11086017	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300033408\|Ga0316605_10451752	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300033414\|Ga0316619_11073613	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300033416\|Ga0316622_101174253	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300033416\|Ga0316622_101679536	Not Available	740	Open in IMG/M
3300033416\|Ga0316622_102134305	Not Available	650	Open in IMG/M
3300033416\|Ga0316622_102841985	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales	554	Open in IMG/M
3300033418\|Ga0316625_102444451	Not Available	527	Open in IMG/M
3300033419\|Ga0316601_102345094	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300033429\|Ga0316193_10430918	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300033429\|Ga0316193_11623922	Not Available	513	Open in IMG/M
3300033481\|Ga0316600_10999896	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300033483\|Ga0316629_10762200	Not Available	739	Open in IMG/M
3300033501\|Ga0326732_1086044	Not Available	515	Open in IMG/M
3300033521\|Ga0316616_100094322	Not Available	2608	Open in IMG/M
3300033521\|Ga0316616_101048431	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300033521\|Ga0316616_102841130	Not Available	652	Open in IMG/M
3300033550\|Ga0247829_11608167	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300034177\|Ga0364932_0415031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300034178\|Ga0364934_0341372	Not Available	567	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.25%
Host-Associated	Host-Associated	19.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.78%
Aquatic	Environmental → Aquatic	25.48%
Plants	Host-Associated → Plants	19.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.10%
Marine	Environmental → Aquatic → Marine	8.92%
Sediment	Environmental → Aquatic → Sediment	8.92%
Freshwater	Environmental → Aquatic → Freshwater	7.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.73%
Peat	Environmental → Terrestrial → Peat	3.18%
Roots	Host-Associated → Plants → Roots	1.91%
Floodplain	Environmental → Terrestrial → Floodplain	1.27%
Cave	Environmental → Terrestrial → Cave	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.92%
Loam	Environmental → Terrestrial → Soil → Loam	8.28%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.82%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.18%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.18%
Coastal	Environmental → Aquatic → Marine → Coastal	2.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.55%
Lake	Environmental → Aquatic → Freshwater → Lake	1.91%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.91%
Sand	Environmental → Terrestrial → Soil → Sand	1.27%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.27%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.27%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.64%
Sediment	Environmental → Aquatic → Marine → Sediment	0.64%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.64%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.29%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.73%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.82%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.18%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.18%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	2.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.55%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.91%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.91%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.91%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.27%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.27%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.27%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.27%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.27%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.64%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.64%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.64%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.64%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.28%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.73%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.46%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.55%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.55%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.55%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.91%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.91%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.27%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	1.27%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Sediment	1.27%
Worm Burrow	Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow	1.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.27%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.27%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.27%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.27%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.64%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.64%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.64%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.64%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.64%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.64%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	0.64%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.64%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	0.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.64%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.64%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.64%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.64%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.64%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.64%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.64%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003989	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordA_D2	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300004007	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordC_D2	Environmental	Open in IMG/M
3300004011	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D2	Environmental	Open in IMG/M
3300004065	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004146	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D2	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005830	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.178_YBM	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006186	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009455	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal Spring	Environmental	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009799	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010412	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300014311	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015253	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT590_16_10D	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300022221	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_8_1	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025551	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032258	Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2 cm	Environmental	Open in IMG/M
3300032276	Coastal sediment microbial communities from Maine, United States - Phippsburg worm burrow 1	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033429	Coastal sediment microbial communities from Maine, United States - Merrow Island sediment 2	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033501	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF12FN SIP fraction	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1150564511	3300000956	Soil	DRVSRDELVHAARENGALEEARAQAERYAAAARADLAGFERSPYREALQALPDFILARDH
JGIcombinedJ13530_1065455221	3300001213	Wetland	EARRLAEDYAEHARRDLAGFERSAYSEALRALPDFILGRDH*
Ga0055473_102874312	3300003989	Natural And Restored Wetlands	VSRDEIVRLARERGALDEARVLAEQYAAAARGDLMVFEPSSYRDALEALPGFILARDH*
Ga0055435_100948083	3300003994	Natural And Restored Wetlands	DRGFQRVSPDDVARLARECGALDEARSLAEEYAAAARADLLAFDRSPYREALAALPDFILARDH*
Ga0055476_101905851	3300004007	Natural And Restored Wetlands	DRADQLLELARTSGALSEAQRLAEDYAEAARRDLLAFEGSPFRDALEALPGFVLARDH*
Ga0055460_101419342	3300004011	Natural And Restored Wetlands	GFSRVSREELVRMARECGALDEASRMAEEYADLALRELLAFEPSPYREALEALPGFILARDH*
Ga0055481_104626941	3300004065	Natural And Restored Wetlands	GDAEKVRIVLEDRGFGRVSRDEIVRLARERGALDEARVLAEQYAAAARGDLMVFEPSSYRDALEALPGFILARDH*
Ga0062593_1004928482	3300004114	Soil	RALAERYAAAARADLAGFERSPYREALEALPDFILARDH*
Ga0055495_101606882	3300004146	Natural And Restored Wetlands	RVTREELVKMARECGALDEARDLAEGYAAAARRDLVAFEPSEYREALEALPGFILARDY*
Ga0070690_1003216191	3300005330	Switchgrass Rhizosphere	LDEARALAERYAEAARKDLAVFDRSPFREALSVLPDFILSRDH*
Ga0066388_1000642781	3300005332	Tropical Forest Soil	EARAQAERYAAAAGADLVGFERSPYREALEALPNLLLARDH*
Ga0068869_1000492303	3300005334	Miscanthus Rhizosphere	EARAQAERYADTARRALRAFDPSPYRDALEALPDFILARDH*
Ga0070687_1011552271	3300005343	Switchgrass Rhizosphere	EDRGFSRVAEDELVSLAVEHGAILEARAQAERYADTARRALRAFDPSPYRDALEALPDFILARDH*
Ga0070671_1009492662	3300005355	Switchgrass Rhizosphere	ELLRLAREHGALDEARALAERYAEAARKDLAVFDRSPFREALSVLPDFILSRDH*
Ga0070708_1008979621	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	ATAAAERYAESARQDLGAFGPSSYREALERLPHYILSRHH*
Ga0066686_106610392	3300005446	Soil	ALEEARAQAERYAVAARADLAGFERSPYREALEVLPDFILARDH*
Ga0070698_1008653061	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	ENGALEEARAQAERYATAARADLASFERSPYREALQVLPDFILARDH*
Ga0070686_1010427442	3300005544	Switchgrass Rhizosphere	LRLAREHGALDEARALAERYAEAARKDLAAFDRSPFREALAVLPDFILSRDH*
Ga0070695_1007829372	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LLRLAREHGALDEARALAERYATAARADLTGFERSPYREALEALPDFILARDH*
Ga0070696_1009809132	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	DEARALAERYAAAARADLTGFERSPYREALEALPDFIVARDH*
Ga0066701_106811712	3300005552	Soil	FGRVSREEIVRLAREHGALDEARALAETYAEAARRDLSAFERSPYREALEVLPDFILARDH*
Ga0066705_109329442	3300005569	Soil	RKLAERYAEAARRELAVFERSPYREALAVLPDFILGRDH*
Ga0070702_1001986001	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	DEARALAERYAEAARKDLAVFDRSPFREALAVLPDFILSRDH*
Ga0066903_1073649201	3300005764	Tropical Forest Soil	VSREDLVRLARDCGALEEARALAERCADEARASLLAFEPSPYREALEALPGFILARDH*
Ga0074473_111098762	3300005830	Sediment (Intertidal)	LARECGALDEARAMAERYADLARRELLAFDPSPYRDALEALPGFILARDH*
Ga0074472_113314251	3300005833	Sediment (Intertidal)	ELVRMARECGALDQALEMAERYADLARRDLLAFDPSPYREALEALPGFILARDH*
Ga0074470_104227622	3300005836	Sediment (Intertidal)	VVKDRGFERVSPDDVARLARECGALDEARSLAEEYAAAARADLLALDRSPYREALAALPDFILARDH*
Ga0068858_1011460572	3300005842	Switchgrass Rhizosphere	DEARALAERYAEAARKDLAVFDRSPFREALSVLPDFILSRDH*
Ga0068858_1015760091	3300005842	Switchgrass Rhizosphere	AERYAAAARADLAGFERSPYREALEALPEFILARDH*
Ga0075369_104032792	3300006186	Populus Endosphere	EARALAARYAEAARKDLAVFDRSPFREALAVLPDFILSRDH*
Ga0097621_1006935971	3300006237	Miscanthus Rhizosphere	AERYAEAARKDLAAFDRSPFREALAVLPDFILSRDH*
Ga0066665_102712062	3300006796	Soil	GMPRDNGVLEEARAQAERYAVADQSDLAGFERSPYREALEVLPDFILARDH*
Ga0075428_1002594261	3300006844	Populus Rhizosphere	RLARECGALDEAHGMAERYAEEARASLLAFEASPYREALEALPGFILARDH*
Ga0075428_1026443961	3300006844	Populus Rhizosphere	ARKHGAIDEARSQAERYAAAARRDLAAFDGSAYRDALEMLPDFILARDH*
Ga0075421_1008545152	3300006845	Populus Rhizosphere	CGALEEARAMAERYADEARASLLAFEPSPYREALDALPGFILARDH*
Ga0075421_1009351173	3300006845	Populus Rhizosphere	ALAARYAEAARKDLSVFERSPFREALAVLPDFILGRDH*
Ga0075430_1010956211	3300006846	Populus Rhizosphere	GALDEARALAERYAAAARADLMAFERSPYREALEALPDFILARDH*
Ga0075425_1022544691	3300006854	Populus Rhizosphere	SLAVEHGAILEARAQAERYADTARRALRAFDPSPYRDALEALPDFILARDH*
Ga0075434_1001690223	3300006871	Populus Rhizosphere	RYAEAARKDLAVFDRSPFREALAVLPDFILSRDH*
Ga0075429_1001294991	3300006880	Populus Rhizosphere	RAFARVSRDELVRLARECGALDEAHGMAERYAEEARASLLAFEASPYREALEALPGFILARDH*
Ga0075435_1000398291	3300007076	Populus Rhizosphere	FERVSREDLLRLAREHGALEEARALAARYADAARKDLAAFERSPFREALAVLPDFILSRDH*
Ga0099791_106713342	3300007255	Vadose Zone Soil	ELVRAARENGALEEARAQAERYAAAARADLAGFERSPYREALQALPDFILARDH*
Ga0066710_1001412124	3300009012	Grasslands Soil	GRVSREEIVRLAREHGALDEARALAETYAEAARRDLSAFERSPYREALEVLPDFILARDH
Ga0066710_1013302323	3300009012	Grasslands Soil	LADRGFGRVSREELLLLAREHGALDEARALAERYAAAARADLAGFERSPYREALEALPDFILARDH
Ga0066710_1023296061	3300009012	Grasslands Soil	RVLAERYAASARQDLLAFERSPYRDALRVLPDFILARDH
Ga0099829_109617162	3300009038	Vadose Zone Soil	ALDEARALAETYAEAAKRDLSAFERSPYREALEVLPDFILARDH*
Ga0099827_108029721	3300009090	Vadose Zone Soil	LAETYAEAARRDLSAFERSPYREALEVLPDFILARDH*
Ga0099827_110399391	3300009090	Vadose Zone Soil	EATAAAERYAESARQDLGAFEPSSYREALERLPHCILSRHY*
Ga0102851_124711452	3300009091	Freshwater Wetlands	RDCGALDEAREMAERYADLARRDLLAFEPSPYREALDALPGFILSRDH*
Ga0111539_132930212	3300009094	Populus Rhizosphere	ERYAAAARADLAGFERSPYREALEALPDFILARDH*
Ga0115026_119556922	3300009111	Wetland	ALAEARALAETYANAARQDLVGFPPSVYRDALIVLPDFILARDH*
Ga0115027_116878292	3300009131	Wetland	EMAERYAALARRDLLAFDPSPYRDALLALPGFILARDH*
Ga0105091_102030671	3300009146	Freshwater Sediment	ELVKMARECGALDQARDLAEGYAAAARRDLLVFEPSEYREALEALPGFILARDH*
Ga0075423_103077812	3300009162	Populus Rhizosphere	AERYAAAARADLAGFERSPYREALQVLPDFILARDH*
Ga0114939_101303611	3300009455	Groundwater	ARECGALDEARAMAERYADAARDELRSFEPSEYKDALEALPGFILARDH*
Ga0118657_101884113	3300009506	Mangrove Sediment	GALEEAGSLAERYAEAARRDLRIFEPSPYREALEALPGFILARDH*
Ga0105347_10980781	3300009609	Soil	MAERYADEARASLLAFEPSPYREALDALPGFILARDH*
Ga0126374_107456811	3300009792	Tropical Forest Soil	RMARENGAIEEARAQAERYAAAAGADLVGFERSPYREALEALPNLLLARDH*
Ga0105075_10281762	3300009799	Groundwater Sand	ERASRDELVRAARDNGALEEARVQAERYAAAARADLAGFERSPYREALEALPDFILARDH
Ga0105066_10830441	3300009822	Groundwater Sand	QYAEMARRDLLVFDRSPYREALEILPNFILARDH*
Ga0134062_106901261	3300010337	Grasslands Soil	QAERYAAAARADLAGFDRSPYREALQALPDFILARDH*
Ga0126372_116864832	3300010360	Tropical Forest Soil	VTREELLRLAREHGALEEARALAERYAEMARKDLAIFERSPFREALVVLPDFILSRDH*
Ga0134124_126678901	3300010397	Terrestrial Soil	EARALAERYADSARQQLRVFEPSAYRDALEALPDFILARDH*
Ga0134127_122774101	3300010399	Terrestrial Soil	PPAAEMVGAVLEDRGFDRVSRDELLRLAREHGALEEARLLAERYAAAARHDLAGFERTPYREALEALPEFILARNY*
Ga0134127_136534852	3300010399	Terrestrial Soil	ARALAERYAEQARRDLQPFERSSYREALEALPDFILARDH*
Ga0134122_116872562	3300010400	Terrestrial Soil	REHGALDEARALAETYAEAARRDLSGFERSPYREALEALPDFILARDH*
Ga0134121_110241971	3300010401	Terrestrial Soil	ELLKLAREHGALDEARALAERYAAAARADLAGFERSPYREALEALPDFILARDH*
Ga0134121_124421001	3300010401	Terrestrial Soil	LEDARALAARYAEAARKDLAVFERSPFREALAVLPDFILSRDH*
Ga0136852_110826611	3300010412	Mangrove Sediment	RGFTRVPAAEIARLARETGALAEARSLAEDYAQAARQDLVGFEPSIYRDALAVLPDFILARDH*
Ga0137457_13476342	3300011443	Soil	AVEYAARARRDLQVFERSKYREALEALPDFILSRDH*
Ga0137389_101309481	3300012096	Vadose Zone Soil	RVSRDELVRAARENGALEEARAQAERYAAAARDDLAGFDRSPYREALQALPDFILARDH*
Ga0137363_112714021	3300012202	Vadose Zone Soil	HGALDEARALAETYAEAARRDLSAFERSPYREALEVLPDFILARDH*
Ga0137361_109020631	3300012362	Vadose Zone Soil	ARALAERYAEAARRDLAAFERSPYRDALEVLPGFILSRDH*
Ga0137373_101175551	3300012532	Vadose Zone Soil	REHGALDEARALAQRYAEAARRDLAVFDRSPYREALEVLPDFILSRDH*
Ga0137397_111151422	3300012685	Vadose Zone Soil	GALDEAQALAETYAEKARRDLAVFERSPYREALEVLPDFILARDH*
Ga0137396_104111392	3300012918	Vadose Zone Soil	EEARAQAERYAAAARADLAGFERSPYREALQALPDFILARDH*
Ga0137394_105955812	3300012922	Vadose Zone Soil	FERVSRDELVRAARENGALEEARAQAERYAAAARADLAGFDRSPFREALQALPDFILARDH*
Ga0153915_120177842	3300012931	Freshwater Wetlands	EMAERYADLARRDLLAFDPSPYREALDALPGFILSRDH*
Ga0075322_11201062	3300014311	Natural And Restored Wetlands	ELAERYAEEARRDLLAFEPSEYRDALEALPGFILARDH*
Ga0163163_126905742	3300014325	Switchgrass Rhizosphere	GFDRVSPDAIVRLARDCGALEEARALAERYAEAARQDLLAFDRSPCREALEALPGFILARDH*
Ga0180094_11585432	3300014881	Soil	DMAERYAELARRDLLAFEPSPYRDALEALPGFILARDH*
Ga0180094_11661441	3300014881	Soil	CGALDQAHDMAERYADEARASLLAFEPSPYREALEALPSFILARDH*
Ga0173483_107734122	3300015077	Soil	VRLARDCGALEEARAMAERYADEARASLLAFEPSPYREALDALPGFILARDH*
Ga0180081_10606622	3300015253	Soil	VRLARECGALDEAHGMAERHADEARASLLAFEPSPYREALDALPGFILARDY*
Ga0180085_12333461	3300015259	Soil	ELVRMARDCGALEEAREMAERYADLARRDLLAFDPSPYRDALDALPGFILGRDH*
Ga0132258_111174751	3300015371	Arabidopsis Rhizosphere	LRRGGPAAAELVASVLAERGFGRVTREELVRMARDNGALDEARAQAERYAAAARADLAGFDRSPYREALDVLPTLLLARDH*
Ga0132258_119238893	3300015371	Arabidopsis Rhizosphere	GALDEPRALAEEYADNARRELLVFDRSPYREALEILPDFILARDH*
Ga0132258_135002931	3300015371	Arabidopsis Rhizosphere	ALEEARAMAERYADEARESLLAFEPSPYREALDALPGFILARDH*
Ga0187779_103566561	3300017959	Tropical Peatland	LAEVYADRARRDLALFDRSAYREALEILPDFILARDH
Ga0184610_12640771	3300017997	Groundwater Sediment	QAERYAAAARADLAGFERSPYREALQALPDFILARDH
Ga0187766_114848961	3300018058	Tropical Peatland	RVTREELVRMARDCGALEEARALAERYADEACRELLAFDPSEYREALSALPGFILARDH
Ga0184637_104187551	3300018063	Groundwater Sediment	DRVSQVLADRGFGRVTREEIVKLAREHGALDEARALAETYAEAARRDLAVFDRSAYREALEALPDFILARDH
Ga0187773_100212871	3300018064	Tropical Peatland	TMAERFAQAARRELLAFEPSSYRDALEALPGFILARDH
Ga0184628_104056662	3300018083	Groundwater Sediment	RDELVRLARECGALDEANEMAERYAALARRDLLAFEPSPYRDALEALPGFILARDH
Ga0184629_103163402	3300018084	Groundwater Sediment	EHGALDEARALAERYAEAARKDLAVFDRSPYREALEVLPDFILARDH
Ga0187774_110912382	3300018089	Tropical Peatland	ARDCGALDDARAMAERFAQAARRELLAFEPSSYRDALEALPGFILARDH
Ga0066662_129090052	3300018468	Grasslands Soil	DNGALEEARAQAERYAAAARADLAGFDRSPYREALEALPDFILARDH
Ga0187893_107895082	3300019487	Microbial Mat On Rocks	EEYADAARRDLLVFERSPYREALAALPDFILARDH
Ga0210377_105427952	3300021090	Groundwater Sediment	EDYAEKARRDLMAFDRSPYREALSVLPDFILSRDH
Ga0224506_101069032	3300022221	Sediment	EAYAERALEALRPFEHSPYREALSSLPGFILARDY
Ga0209519_102159141	3300025318	Soil	DCGALDEARGMAERYADEARANLIVFEPSPYREALDALPGFILARDH
Ga0209640_102735691	3300025324	Soil	AEHYASAARRDLLAFEPSVYREALEALPDFILSRDH
Ga0209751_109083571	3300025327	Soil	RLAREQGAIEEARALAERYAEAARADLQSFERTPYREALAALPDFILARDH
Ga0210131_10862701	3300025551	Natural And Restored Wetlands	RSLAEEYAAAARADLLAFDRSPYREALAALPDFILARDH
Ga0207681_109003671	3300025923	Switchgrass Rhizosphere	AREHGALEEARALAARYAESARKDLAVFDRSPFREALAVLPDFILSRDH
Ga0207709_109960232	3300025935	Miscanthus Rhizosphere	LRLAREHGALDEARALAERYAEAARKDLAAFDRSPFREALAVLPDFILSRDH
Ga0207704_109344701	3300025938	Miscanthus Rhizosphere	AERYAAAARADLAGFERSPYREALEALPDFILARDH
Ga0207691_112740642	3300025940	Miscanthus Rhizosphere	AVLADRGFGRVSREELLKLAREHGALDEARALAERYAAAARADLAGFERSPYREALEALPEFILARDH
Ga0207651_109876531	3300025960	Switchgrass Rhizosphere	HGALDEARALAERYAEAARKDLAAFDRSPFREALAVLPDFILSRDH
Ga0207640_102209822	3300025981	Corn Rhizosphere	LDEARALAERYAEAARKDLAVFDRSPFREALAVLPDFILSRDH
Ga0207639_116221082	3300026041	Corn Rhizosphere	EARALAERYAEAARKDLAAFDRSPFREALAVLPDFILSRDH
Ga0207708_111629352	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	CGALDEARALAERYAEQARRDLQPFERSAYREALEALPDFILARDH
Ga0209807_13352672	3300026530	Soil	RKLAERYAEAARRELAVFERSPYREALAVLPDFILGRDH
Ga0209056_100557973	3300026538	Soil	SRRRAQAERYAVAARADLAGFERSPYREALEVLPDFILARDH
Ga0209376_10344723	3300026540	Soil	ERYAAAARADLAGFERSPYREALQALPDFILARDH
Ga0209161_103533711	3300026548	Soil	ARGQAERYAAAARADLAGFDRSPYREALQALPDFILARDH
Ga0209077_11458552	3300027675	Freshwater Sediment	RDELVKMARECGALDQARDLAEGYAAAARRDLLVFEPSEYREALEALPGFILARDH
Ga0209798_105241681	3300027843	Wetland Sediment	REHGALDEARTMAERYAESARQQLRAFEPSPYRDALEALPDFILARDH
Ga0209579_101000631	3300027869	Surface Soil	RSLAEEYADRARRDLASFERSAYREALEALPDFILARDH
Ga0207428_111453242	3300027907	Populus Rhizosphere	ERYAAAARADLAGFERSPYREALEALPDFILARDH
Ga0209382_112015741	3300027909	Populus Rhizosphere	AERFAALARRDVLAFERSPYREALELLPDFILARDH
Ga0311334_110934652	3300029987	Fen	RECGALEEAGELAERYADEARRDLLAFPPSEYRDALEALPGFILARDH
Ga0311365_112966672	3300029989	Fen	GALEDARKLAEHYADEARRELLAFEPSEYRDALETLPGFILARDH
Ga0302046_107922861	3300030620	Soil	DLLRQAREHGALEEARALAERYAEAARRDLAVFERSPYREALAALPDFILARDH
Ga0311335_104063001	3300030838	Fen	EELVRMARDCGALEEAQTMAERYAEAARGELLAFEPSEYRDALFALPGFVLARDH
Ga0311335_111382771	3300030838	Fen	ARKLAEHYADEARRELLAFEPSEYRDALETLPGFILARDH
Ga0310907_104445272	3300031847	Soil	GQAERYADSARRALRGFDPSPYRDALEALPDFILARDH
Ga0315297_117305082	3300031873	Sediment	MAERYAELARRDLLAFDPSPYRDALEALPSFILARDH
Ga0214473_113119291	3300031949	Soil	LVRLARECGALDEARGMAERYADEARASLLAFEPSPYREALDALPGFILARDH
Ga0315278_115579421	3300031997	Sediment	VRLARECGALDEAHGMAERYADEARASLLAFEPSPYREALEALPGFILARDH
Ga0307411_121546852	3300032005	Rhizosphere	REQLLRLARETGALDEARKEADRYAAAARQDLLVFDRSPYREALTALPDFILARDR
Ga0310899_103268761	3300032017	Soil	ARALAERYADLAREDLSALEPSPNREALSVLPDFILARDH
Ga0307470_103707252	3300032174	Hardwood Forest Soil	EARAMAERYADEARASLLAFEPSPYREALDALPGFILARDH
Ga0316191_113464722	3300032258	Worm Burrow	AGSLAERYAEAARRDLRVFEPSPYREALEALPGFILARDH
Ga0316188_101219581	3300032276	Worm Burrow	RDHGALEEAGSLAERYAEAARRDLQVFEPSPYREALEALPGFILARDH
Ga0315287_118012192	3300032397	Sediment	ERYAALARRDLLAFDPSPYRDALLALPGFILARDH
Ga0335085_108622373	3300032770	Soil	EEYADAARRDLLGFERSAYCEALAALPDFILARDH
Ga0335077_110860173	3300033158	Soil	VSAEELVRLARECSALDEARALAEDYADRARRDLLAFERSPYREALAVLPDFILARDH
Ga0316605_104517522	3300033408	Soil	MAERYAEEARRELLAFEPSDYREALEALPGFILARDH
Ga0316619_110736131	3300033414	Soil	AFSRVTRDELVRMARDCGALDEAREMAERYADLARRDLLAFEPSPCREALDALPGFILARDH
Ga0316622_1011742531	3300033416	Soil	AVLDDRAFSRVTREELVRMARECGALEEARAMAERYADSARHDLLAFDPSPYREALEALPGFILGRDH
Ga0316622_1016795361	3300033416	Soil	AEHYAELARRDLAVFEPSPYRDALEALPGFILARDH
Ga0316622_1021343051	3300033416	Soil	ELAERYAELARRDLLAFEPSEYRDALEALPGFILARDH
Ga0316622_1028419852	3300033416	Soil	ALDEARELAAVYAEQARRQLDVFEPSEYRDTLLALPGFILARDH
Ga0316625_1024444511	3300033418	Soil	ALDEASGLAERYAERARRDLLAFEPSQYRDALEALPGFILARDH
Ga0316601_1023450941	3300033419	Soil	VRMARECGALDEAREMAERYADLARRDLLAFEPSPYRDALEALPGFILARDH
Ga0316193_104309182	3300033429	Sediment	GSLAERYAEAARRDLRVFEPSPYREALEALPGFILARDH
Ga0316193_116239221	3300033429	Sediment	AGSLAERYAEAARQALRAFEPSPYRDALEALPGFILARDH
Ga0316600_109998961	3300033481	Soil	ARDCGALDEAREMAERYADLARRDLLAFEPSPYREALDALPGFILSRDH
Ga0316629_107622002	3300033483	Soil	RVTRDELVRMAGECGALEEAQEMAERYADFARRDLLAFDPSPYREALEALPGFILGRDH
Ga0326732_10860442	3300033501	Peat Soil	LVRMARDCGALEEARRMAERYAEEARRELLAFEPSEYREALLALPGFILARDH
Ga0316616_1000943223	3300033521	Soil	MARDCGALEEARELAERYADLARRDLLAFDPSPYREALEALPSFILARDH
Ga0316616_1010484311	3300033521	Soil	ELVRMARECGALDEAREMAERYAGRARRDLLAFEPSPYREALDALPGFILSRDH
Ga0316616_1028411302	3300033521	Soil	EDARRMAERYAEEARRELLAFEPSEYREALEALPGFILARDH
Ga0247829_116081671	3300033550	Soil	EARGLAEQYAERARRDLAAFERSPYREALAVLPDFILARDH
Ga0364932_0415031_378_506	3300034177	Sediment	DEARALAEQYAEKARRDLLVFDRSPYREALEILPDFILARDH
Ga0364934_0341372_422_565	3300034178	Sediment	ECGALEEARRLAERYAEAARRELMGFERSPHREALLALPDFILARDH

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F042975

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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