Metagenome / Metatranscriptome Family F043003

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F043003
Family Type	Metagenome / Metatranscriptome
Number of Sequences	157
Average Sequence Length	67 residues
Representative Sequence	MLSVNQLEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLKAPV
Number of Associated Samples	109
Number of Associated Scaffolds	157

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	93.63 %
% of genes near scaffold ends (potentially truncated)	13.38 %
% of genes from short scaffolds (< 2000 bps)	77.71 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.318 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.115 % of family members)
Environment Ontology (ENVO)	Unclassified (34.395 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.408 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.11% β-sheet: 0.00% Coil/Unstructured: 37.89%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 157 Family Scaffolds
PF03264	Cytochrom_NNT	34.39
PF04216	FdhE	3.18
PF07080	DUF1348	2.55
PF00939	Na_sulph_symp	2.55
PF00401	ATP-synt_DE	1.91
PF13442	Cytochrome_CBB3	1.91
PF01740	STAS	1.27
PF03916	NrfD	1.27
PF13683	rve_3	1.27
PF11950	DUF3467	1.27
PF00194	Carb_anhydrase	1.27
PF08308	PEGA	1.27
PF00072	Response_reg	0.64
PF02276	CytoC_RC	0.64
PF13435	Cytochrome_C554	0.64
PF13247	Fer4_11	0.64
PF01609	DDE_Tnp_1	0.64
PF07715	Plug	0.64
PF04264	YceI	0.64
PF13377	Peripla_BP_3	0.64
PF01850	PIN	0.64
PF09699	Paired_CXXCH_1	0.64
PF13384	HTH_23	0.64
PF00593	TonB_dep_Rec	0.64
PF02321	OEP	0.64
PF01988	VIT1	0.64
PF01568	Molydop_binding	0.64
PF01527	HTH_Tnp_1	0.64
PF03466	LysR_substrate	0.64
PF13590	DUF4136	0.64

COG ID	Name	Functional Category	% Frequency in 157 Family Scaffolds
COG3005	Tetraheme cytochrome c subunit NapC of nitrate or TMAO reductase	Energy production and conversion [C]	34.39
COG3058	Formate dehydrogenase maturation protein FdhE	Posttranslational modification, protein turnover, chaperones [O]	3.18
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	2.55
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	2.55
COG3558	Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamily	Function unknown [S]	2.55
COG0355	FoF1-type ATP synthase, epsilon subunit	Energy production and conversion [C]	1.91
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.27
COG3338	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	1.27
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.64
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.64
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.64
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.64
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.64
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.64
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.64
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.64
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.32 %
Unclassified	root	N/A	49.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.32 %
Unclassified	root	N/A	49.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.32 %
Unclassified	root	N/A	49.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	19.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.27 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.68 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.37 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.55 %
Kiritimatiellota	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota	0.64 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.64 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.68 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.55 %
Tichowtungiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Tichowtungiia	0.64 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.64 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.64 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.68 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.55 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.64 %
Tichowtungiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Tichowtungiia → Tichowtungiales	0.64 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.64 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.55 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.27 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.27 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.64 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.64 %
Tichowtungiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Tichowtungiia → Tichowtungiales → Tichowtungiaceae	0.64 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.55 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1.27 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	1.27 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.64 %
Tichowtungia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Tichowtungiia → Tichowtungiales → Tichowtungiaceae → Tichowtungia	0.64 %
Anaeromyxobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae	0.64 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.55 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1.27 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	1.27 %
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	0.64 %
Tichowtungia aerotolerans	species	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Tichowtungiia → Tichowtungiales → Tichowtungiaceae → Tichowtungia → Tichowtungia aerotolerans	0.64 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.64 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.55 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1.27 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	1.27 %
unclassified Anaeromyxobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter	0.64 %
Tichowtungia aerotolerans	species	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Tichowtungiia → Tichowtungiales → Tichowtungiaceae → Tichowtungia → Tichowtungia aerotolerans	0.64 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.64 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.55 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1.27 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	1.27 %
Anaeromyxobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter → Anaeromyxobacter sp.	0.64 %
Tichowtungia aerotolerans	species	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Tichowtungiia → Tichowtungiales → Tichowtungiaceae → Tichowtungia → Tichowtungia aerotolerans	0.64 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.64 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17331464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1287	Open in IMG/M
3300000559\|F14TC_100476173	Not Available	2683	Open in IMG/M
3300001867\|JGI12627J18819_10064335	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300004080\|Ga0062385_10020580	All Organisms → cellular organisms → Bacteria	2474	Open in IMG/M
3300004082\|Ga0062384_100800613	Not Available	658	Open in IMG/M
3300004091\|Ga0062387_100036160	All Organisms → cellular organisms → Bacteria	2238	Open in IMG/M
3300004091\|Ga0062387_100119237	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300004091\|Ga0062387_100520805	Not Available	835	Open in IMG/M
3300004091\|Ga0062387_100832325	Not Available	691	Open in IMG/M
3300004092\|Ga0062389_100058700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3136	Open in IMG/M
3300004479\|Ga0062595_100323045	Not Available	1056	Open in IMG/M
3300004479\|Ga0062595_100452285	Not Available	944	Open in IMG/M
3300005437\|Ga0070710_10058208	All Organisms → cellular organisms → Bacteria	2192	Open in IMG/M
3300005439\|Ga0070711_100334842	Not Available	1213	Open in IMG/M
3300005439\|Ga0070711_100658495	All Organisms → cellular organisms → Bacteria → Acidobacteria	878	Open in IMG/M
3300005440\|Ga0070705_100100401	All Organisms → cellular organisms → Bacteria	1826	Open in IMG/M
3300005445\|Ga0070708_101121200	Not Available	737	Open in IMG/M
3300005466\|Ga0070685_10293636	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300005539\|Ga0068853_100214840	Not Available	1754	Open in IMG/M
3300005541\|Ga0070733_10033236	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3216	Open in IMG/M
3300005549\|Ga0070704_100319340	Not Available	1301	Open in IMG/M
3300005602\|Ga0070762_10491564	Not Available	803	Open in IMG/M
3300005618\|Ga0068864_100635450	Not Available	1038	Open in IMG/M
3300005841\|Ga0068863_101653760	Not Available	650	Open in IMG/M
3300005843\|Ga0068860_100756079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M
3300005921\|Ga0070766_10143853	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300005921\|Ga0070766_10330859	All Organisms → cellular organisms → Bacteria → Acidobacteria	985	Open in IMG/M
3300006175\|Ga0070712_100875047	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300006176\|Ga0070765_100000280	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	30655	Open in IMG/M
3300006176\|Ga0070765_100732511	Not Available	934	Open in IMG/M
3300006176\|Ga0070765_100772517	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300006176\|Ga0070765_101183572	All Organisms → cellular organisms → Bacteria → Acidobacteria	722	Open in IMG/M
3300006176\|Ga0070765_101445159	Not Available	648	Open in IMG/M
3300006176\|Ga0070765_101895042	Not Available	558	Open in IMG/M
3300006852\|Ga0075433_10119531	All Organisms → cellular organisms → Bacteria	2339	Open in IMG/M
3300006881\|Ga0068865_100541949	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300006914\|Ga0075436_100413768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978	Open in IMG/M
3300009174\|Ga0105241_12182838	Not Available	549	Open in IMG/M
3300009176\|Ga0105242_11733916	Not Available	661	Open in IMG/M
3300009177\|Ga0105248_13318510	Not Available	512	Open in IMG/M
3300009553\|Ga0105249_10628052	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter → Anaeromyxobacter sp.	1131	Open in IMG/M
3300009553\|Ga0105249_11365031	Not Available	781	Open in IMG/M
3300010375\|Ga0105239_11011023	Not Available	956	Open in IMG/M
3300011120\|Ga0150983_10819194	All Organisms → cellular organisms → Bacteria → Acidobacteria	1199	Open in IMG/M
3300011120\|Ga0150983_12274143	Not Available	809	Open in IMG/M
3300012202\|Ga0137363_10233439	Not Available	1489	Open in IMG/M
3300012203\|Ga0137399_11534461	Not Available	554	Open in IMG/M
3300012685\|Ga0137397_10130584	Not Available	1854	Open in IMG/M
3300012685\|Ga0137397_10342912	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300012922\|Ga0137394_10296523	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300012958\|Ga0164299_10778915	Not Available	679	Open in IMG/M
3300012960\|Ga0164301_10441842	Not Available	922	Open in IMG/M
3300012961\|Ga0164302_11480059	Not Available	558	Open in IMG/M
3300012986\|Ga0164304_10292758	Not Available	1112	Open in IMG/M
3300014968\|Ga0157379_11320933	Not Available	697	Open in IMG/M
3300015371\|Ga0132258_12987740	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300016319\|Ga0182033_11007300	Not Available	741	Open in IMG/M
3300020140\|Ga0179590_1004075	All Organisms → cellular organisms → Bacteria	2732	Open in IMG/M
3300020199\|Ga0179592_10198424	Not Available	910	Open in IMG/M
3300020579\|Ga0210407_10058737	Not Available	2878	Open in IMG/M
3300020579\|Ga0210407_10967153	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300020580\|Ga0210403_10058851	All Organisms → cellular organisms → Bacteria	3077	Open in IMG/M
3300020580\|Ga0210403_10095197	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	2411	Open in IMG/M
3300020580\|Ga0210403_10233504	All Organisms → cellular organisms → Bacteria	1509	Open in IMG/M
3300020580\|Ga0210403_10476335	Not Available	1015	Open in IMG/M
3300020581\|Ga0210399_10009823	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7478	Open in IMG/M
3300020581\|Ga0210399_10038471	All Organisms → cellular organisms → Bacteria → Acidobacteria	3829	Open in IMG/M
3300020581\|Ga0210399_11070472	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	646	Open in IMG/M
3300020583\|Ga0210401_10018524	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	6708	Open in IMG/M
3300020583\|Ga0210401_10425156	Not Available	1191	Open in IMG/M
3300021088\|Ga0210404_10220854	Not Available	1022	Open in IMG/M
3300021088\|Ga0210404_10231607	Not Available	1000	Open in IMG/M
3300021168\|Ga0210406_10000705	All Organisms → cellular organisms → Bacteria → Acidobacteria	44062	Open in IMG/M
3300021168\|Ga0210406_10025942	All Organisms → cellular organisms → Bacteria → Acidobacteria	5369	Open in IMG/M
3300021168\|Ga0210406_10092202	All Organisms → cellular organisms → Bacteria	2580	Open in IMG/M
3300021171\|Ga0210405_10368587	Not Available	1132	Open in IMG/M
3300021180\|Ga0210396_10844076	Not Available	784	Open in IMG/M
3300021180\|Ga0210396_11463563	Not Available	563	Open in IMG/M
3300021181\|Ga0210388_10005571	All Organisms → cellular organisms → Bacteria	9854	Open in IMG/M
3300021401\|Ga0210393_10029384	All Organisms → cellular organisms → Bacteria	4293	Open in IMG/M
3300021402\|Ga0210385_10124874	All Organisms → cellular organisms → Bacteria	1820	Open in IMG/M
3300021404\|Ga0210389_10277464	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300021405\|Ga0210387_10626735	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300021406\|Ga0210386_10742434	Not Available	845	Open in IMG/M
3300021406\|Ga0210386_11401296	Not Available	586	Open in IMG/M
3300021407\|Ga0210383_10000024	All Organisms → cellular organisms → Bacteria	190173	Open in IMG/M
3300021407\|Ga0210383_10546677	All Organisms → cellular organisms → Bacteria → Acidobacteria	999	Open in IMG/M
3300021407\|Ga0210383_10847316	Not Available	781	Open in IMG/M
3300021433\|Ga0210391_10000510	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	40302	Open in IMG/M
3300021475\|Ga0210392_11222819	Not Available	562	Open in IMG/M
3300021478\|Ga0210402_10442533	All Organisms → cellular organisms → Bacteria → Acidobacteria	1207	Open in IMG/M
3300021478\|Ga0210402_10775760	Not Available	883	Open in IMG/M
3300021559\|Ga0210409_10991632	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300022533\|Ga0242662_10253131	Not Available	572	Open in IMG/M
3300024288\|Ga0179589_10015038	All Organisms → cellular organisms → Bacteria	2428	Open in IMG/M
3300025898\|Ga0207692_10999908	Not Available	552	Open in IMG/M
3300025900\|Ga0207710_10345154	Not Available	757	Open in IMG/M
3300025905\|Ga0207685_10254351	Not Available	851	Open in IMG/M
3300025917\|Ga0207660_10398658	Not Available	1108	Open in IMG/M
3300025922\|Ga0207646_10141730	All Organisms → cellular organisms → Bacteria	2165	Open in IMG/M
3300025938\|Ga0207704_10226761	Not Available	1386	Open in IMG/M
3300025939\|Ga0207665_10095365	All Organisms → cellular organisms → Bacteria	2067	Open in IMG/M
3300025941\|Ga0207711_10957935	Not Available	795	Open in IMG/M
3300026035\|Ga0207703_11624721	Not Available	622	Open in IMG/M
3300026088\|Ga0207641_10069696	All Organisms → cellular organisms → Bacteria	3020	Open in IMG/M
3300026377\|Ga0257171_1001372	All Organisms → cellular organisms → Bacteria → Acidobacteria	3334	Open in IMG/M
3300026377\|Ga0257171_1100312	Not Available	514	Open in IMG/M
3300026490\|Ga0257153_1016126	Not Available	1516	Open in IMG/M
3300026555\|Ga0179593_1069015	Not Available	1786	Open in IMG/M
3300026557\|Ga0179587_10404416	Not Available	890	Open in IMG/M
3300027460\|Ga0207506_1001712	All Organisms → cellular organisms → Bacteria → Acidobacteria	1564	Open in IMG/M
3300027768\|Ga0209772_10077997	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300027795\|Ga0209139_10074897	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300027821\|Ga0209811_10076670	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300027867\|Ga0209167_10358149	Not Available	793	Open in IMG/M
3300028016\|Ga0265354_1000898	All Organisms → cellular organisms → Bacteria → Acidobacteria	4739	Open in IMG/M
3300028381\|Ga0268264_10054731	All Organisms → cellular organisms → Bacteria	3332	Open in IMG/M
3300028381\|Ga0268264_11441478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300028906\|Ga0308309_10645749	All Organisms → cellular organisms → Bacteria → Acidobacteria	919	Open in IMG/M
3300029636\|Ga0222749_10095368	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300030813\|Ga0265750_1002739	All Organisms → cellular organisms → Bacteria	1734	Open in IMG/M
3300030842\|Ga0075404_11356711	Not Available	830	Open in IMG/M
3300030862\|Ga0265753_1001844	All Organisms → cellular organisms → Bacteria	1939	Open in IMG/M
3300030967\|Ga0075399_11150444	Not Available	657	Open in IMG/M
3300031057\|Ga0170834_106859994	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1353	Open in IMG/M
3300031057\|Ga0170834_107900963	All Organisms → cellular organisms → Bacteria	1921	Open in IMG/M
3300031057\|Ga0170834_108821508	Not Available	723	Open in IMG/M
3300031057\|Ga0170834_111732096	Not Available	1031	Open in IMG/M
3300031122\|Ga0170822_12217613	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	1421	Open in IMG/M
3300031128\|Ga0170823_10698664	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300031128\|Ga0170823_12550068	Not Available	564	Open in IMG/M
3300031231\|Ga0170824_107742345	Not Available	961	Open in IMG/M
3300031231\|Ga0170824_121070869	Not Available	1608	Open in IMG/M
3300031446\|Ga0170820_12029839	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	816	Open in IMG/M
3300031446\|Ga0170820_14455277	Not Available	549	Open in IMG/M
3300031446\|Ga0170820_16440524	Not Available	617	Open in IMG/M
3300031469\|Ga0170819_14199506	Not Available	602	Open in IMG/M
3300031474\|Ga0170818_102409851	Not Available	769	Open in IMG/M
3300031474\|Ga0170818_108176052	Not Available	595	Open in IMG/M
3300031474\|Ga0170818_108321541	All Organisms → cellular organisms → Bacteria → Proteobacteria	2145	Open in IMG/M
3300031474\|Ga0170818_113150780	Not Available	765	Open in IMG/M
3300031474\|Ga0170818_114226129	Not Available	639	Open in IMG/M
3300031718\|Ga0307474_10555336	Not Available	903	Open in IMG/M
3300031720\|Ga0307469_10084807	All Organisms → cellular organisms → Bacteria	2161	Open in IMG/M
3300031720\|Ga0307469_10285676	Not Available	1350	Open in IMG/M
3300031720\|Ga0307469_10837141	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300031720\|Ga0307469_12132791	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300031740\|Ga0307468_100660349	Not Available	866	Open in IMG/M
3300031754\|Ga0307475_10053883	All Organisms → cellular organisms → Bacteria → Acidobacteria	3029	Open in IMG/M
3300031754\|Ga0307475_10081256	All Organisms → cellular organisms → Bacteria	2499	Open in IMG/M
3300031754\|Ga0307475_10794505	Not Available	751	Open in IMG/M
3300031754\|Ga0307475_11296719	Not Available	564	Open in IMG/M
3300031820\|Ga0307473_10595767	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Tichowtungiia → Tichowtungiales → Tichowtungiaceae → Tichowtungia → Tichowtungia aerotolerans	762	Open in IMG/M
3300031962\|Ga0307479_10061473	All Organisms → cellular organisms → Bacteria	3620	Open in IMG/M
3300032174\|Ga0307470_10329743	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300032180\|Ga0307471_102310697	Not Available	678	Open in IMG/M
3300032261\|Ga0306920_100267727	All Organisms → cellular organisms → Bacteria → Acidobacteria	2548	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.35%
Host-Associated	Host-Associated	14.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.62%
Plants	Host-Associated → Plants	14.65%
Aquatic	Environmental → Aquatic	5.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.01%
Freshwater	Environmental → Aquatic → Freshwater	5.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.42%
Loam	Environmental → Terrestrial → Soil → Loam	17.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.01%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.37%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.64%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.64%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	47.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.37%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.64%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	11.46%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.01%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.37%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.37%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.18%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.27%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.64%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.64%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.64%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027460	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-C (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030842	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030967	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03871860	2088090014	Soil	MLSVNQHEKRRQVAGVFIVLGLVIEALCLLWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLEAPE
F14TC_1004761733	3300000559	Soil	MLSVNQLEKRRQVAGVFIVLGLVIEALCVIWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLKAPE*
JGI12627J18819_100643351	3300001867	Forest Soil	MLSVKQLEKRRQVAGIFIVLGLVIEALCLLWSTPIAFVIFVASGGLFMFVGIVLYLYSLVSHAGVSETVG*
Ga0062385_100205805	3300004080	Bog Forest Soil	MLTVNQLEKRRRVAGVFIVLGLVIEALCLIWSTPIAFVIFVTIGGLLMFVGMVLFLHSLVSDLKAQV*
Ga0062384_1008006131	3300004082	Bog Forest Soil	MLTVNQLEKRRQVAGVFIALGLVIEALCLIWSTPIAFVIFVAIGGFLMFVGIVLFLYSLVLNLEVSE*
Ga0062387_1000361601	3300004091	Bog Forest Soil	MLTVYQLERRRQVAGVFIVLGLVIEELCLIWSTPIAFVIFVAIGGLLMFAGIVLFLYSLVFNLE
Ga0062387_1001192372	3300004091	Bog Forest Soil	MLSTNPLEKRRQFAGVCLVVGLMIEALCLIWSTPIAFVLFVAIGGSLMFVGLVLYLTSLLHTLVIPE*
Ga0062387_1005208052	3300004091	Bog Forest Soil	MLSANHVEKLRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAFGGLLMFAGIVLFLYSLVFNLE
Ga0062387_1008323252	3300004091	Bog Forest Soil	MLSVNQVEKRRQVAGVIIVLGLVIEALCLIWSTPIAFVVFVAIGGFLMFVGILLYLYSLVPNLNTPE*
Ga0062389_1000587003	3300004092	Bog Forest Soil	MMLSANPVEKRRQVAGICLVLGLVIEALCLLWCTPIAFVILVAIGGLLMFVGVVLYLYSLVFSLEAPE*
Ga0062595_1003230451	3300004479	Soil	MMLSTNPLEKRLQFAGLFLALGLLIEGLCLIWSTPIAFVIFVAIGGLFMFIGIATYLYSLVSTVPPPPTS*
Ga0062595_1004522852	3300004479	Soil	MLSVNQLEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLLMFVGIVLFLYSLVSDLKAPV*
Ga0070710_100582082	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MMLSTNPLEKRLQFAGLFLALGLLIEGLCLVWSTPIAFVIFVAIGGLFMFIGIATYLYSLVSTVPPPPTS*
Ga0070711_1003348421	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MLSVNQLEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLSMFVGIVLYLYSLVSNLKAPI*
Ga0070711_1006584951	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MLSVNQLEKRRQVAGSFIVLGLVIEALCLIWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSDLKAPV*
Ga0070705_1001004014	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MLSTNQVEKRRQVAGVFIVLGLVIEALCLIWTTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLAAPE*
Ga0070708_1011212001	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLSTNQVEKRRQVAGVFIVLGLVIEALCLIWTTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLEAPE*
Ga0070685_102936362	3300005466	Switchgrass Rhizosphere	MLSVNQLERRRQVAGVFIVLGLVIEALCLLWSTPIAFVIFVAIGGLLMFVGVVLYLYSLVSNLDAAE*
Ga0068853_1002148403	3300005539	Corn Rhizosphere	MLSVNQLERRRQVAGVFIVLGLVIEALCLLWSTPIAFVIFVAIGGLLMFVGVVLYLYSLVSSLDAAE*
Ga0070733_100332365	3300005541	Surface Soil	MLSINPLEKRRQFAGLCLAVGLVIEALCLHWATPIAFVLFVAIGGSLMFVGLVLYLTSLVNVSRGDRGPEW*
Ga0070704_1003193402	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MPSVNQLEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLLMFVGIVLFLYSLVSDLKAPV*
Ga0070762_104915641	3300005602	Soil	MLSVNQVEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLSMFVGIVLYLYSLVSNLEAPE*
Ga0068864_1006354501	3300005618	Switchgrass Rhizosphere	MLSTNQVEKRRQVAGVFIVVGLVIEALCLIWPTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLEAPE*
Ga0068863_1016537602	3300005841	Switchgrass Rhizosphere	MLGVNQHEKRRQVAGVFIVLGLVIEAMCLLWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSSLDAPE*
Ga0068860_1007560792	3300005843	Switchgrass Rhizosphere	MLSANQVEKRRQVAGVFIVLGLVIEALCLIWPTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLAAPE*
Ga0070766_101438533	3300005921	Soil	MLSANPLDKRRQLAGVCLALGLVVEALCLISATPIAFVIFVALGGLLMFVGIVLYLSSLVVPVTPHEK*
Ga0070766_103308591	3300005921	Soil	LSTNRFERRRQVAGVCVVLGLVIEALCLLWATPIAFVVFVAIGGSLMFVGIVLYLFSLVNTVVSPE*
Ga0070712_1008750472	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLSVNQLEKRRQVAGSFIVLGLVIEALCLIWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLKAPV*
Ga0070765_1000002803	3300006176	Soil	MLSTNRFERRRQVAGVCVVLGLVIEALCLLWATPIAFVVFVAIGGSLMFVGIVLYLFSLVNTVVSPE*
Ga0070765_1007325111	3300006176	Soil	MLGVNQVEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAVGGLLLFVGIVLYLFSLVFNLETRE*
Ga0070765_1007725172	3300006176	Soil	MLTVNQLEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGFLMFAGIVLFLYSLVSNLKVPV*
Ga0070765_1011835721	3300006176	Soil	MLSTNPLEKRRQFAGICLAVGLVIEALCLLWATPIAFVLFVAIGGSLMFVGIVLYLFSLVNTVVTPE*
Ga0070765_1014451591	3300006176	Soil	MLTVNQLEKRRQVAGVLIVLGLVIEALCLIWSTPIAFVIFVAIGGLFMFAGIVLFLYSLVFNLEARE*
Ga0070765_1018950422	3300006176	Soil	MLSANPLDKRRQLAGVCLALGLVVEALCLISATPIAFVIFVALGGLLMLVGIVLYLSSLVVPAIPHEK*
Ga0075433_101195313	3300006852	Populus Rhizosphere	MLSTNQVEKRRQVAGVFIVLGLVIEALCLIWPTPIAFVIFVAIGGLLMFVGIVFYLYSLVSNLEAPE*
Ga0068865_1005419492	3300006881	Miscanthus Rhizosphere	MLSANQVEKRRQVAGVFLVLGLVIEALCLIWPTPIAFVIFVAIGGLLMFVGIVLFLHSLVSNLEAPE*
Ga0075436_1004137682	3300006914	Populus Rhizosphere	MLSTNQVEKRRQVAGVFIVLGLVIEALCLIWPTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLEAPE*
Ga0105241_121828382	3300009174	Corn Rhizosphere	MLSVNQRERRRQVAGVLIVLGLVIEALCLLWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSDLKAPV*
Ga0105242_117339161	3300009176	Miscanthus Rhizosphere	MLSANQVEKRRQVAGVFLVLGLVIEALCLIWPTPIAFVIFVAIGGLLMFVGIVLFLHSLVSNLEAAE*
Ga0105248_133185102	3300009177	Switchgrass Rhizosphere	MLSANQVEKRRQVAGVFIVLGLVIEALCLIWTTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLAAPE*
Ga0105249_106280523	3300009553	Switchgrass Rhizosphere	MLSVNQLERRRQVAGVFIVLGRVIEALCLIWPTPIAFVIFVAIGGLLMFVGIVLFLHSLVSNLEAPE*
Ga0105249_113650312	3300009553	Switchgrass Rhizosphere	MLGVNQLERRRQVAGVFIVLGLVIEALCLLWSTPIAFVIFVAIGGLLMFVGVVLYLYSLVSNLDAAE*
Ga0105239_110110232	3300010375	Corn Rhizosphere	MLSVNQLERRRQVAGVFIVLGLVIEALCLLWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLAAPE*
Ga0150983_108191942	3300011120	Forest Soil	MLSVNRVEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLSMFVGIVLYLYSLVSNLEAPE*
Ga0150983_122741432	3300011120	Forest Soil	MLSPNHLEKLRQIAGIFIVLGLVIEALCLIWSTPIAFVVFVAFGGLLMFLGIALFLYSLVSTHKAPA*
Ga0137363_102334393	3300012202	Vadose Zone Soil	MMLSTNSLEKRLQFAGLFLALGLLIEGLCLVWSTPIAFVIFAAIGGSFMFIGIAIYLYSLVSTFPHPPAS*
Ga0137399_115344612	3300012203	Vadose Zone Soil	MLSVNQLEKRRQVAGVCIVLGLVIEALCLIWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLKAPV*
Ga0137397_101305842	3300012685	Vadose Zone Soil	MMLSTNSLEKRLQFAGLFLALGLLIEGLCLVWSTPIAFVIFVAIGGSFMFIGIAIYLYSLVSTFPHPPAS*
Ga0137397_103429123	3300012685	Vadose Zone Soil	MPSVNQLEKRRQVAGIFIVLGLVIEALCLIWSTPIAFVIFVAIGGLFMFVGILLYLDSLVSSSGVSETVRRY*
Ga0137394_102965231	3300012922	Vadose Zone Soil	MLSVNQLEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLFMFAGILLYLYSLVSSAGVSETGR*
Ga0164299_107789151	3300012958	Soil	MLSVNQLEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVMIGGLLMFVGIVLYLYSLVSNLKAPV*
Ga0164301_104418422	3300012960	Soil	MLSVNQLEKRRQVAGVFIVLGLVVEALCLIWSTPIAFVIFVMIGGLLMFVGIVLYLYSLVSNLKAPI*
Ga0164302_114800592	3300012961	Soil	MLSANQLEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLKAQD*
Ga0164304_102927582	3300012986	Soil	MLSVNQVEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLLMFVGIVLFLYSLVSDLKAPV*
Ga0157379_113209332	3300014968	Switchgrass Rhizosphere	MLSTNQVEKRRQVAGVFIVLGLVIEALCLIWTTPIAFVIFVAIGGLLMFVGVVLYLYSLVSNLDAAE*
Ga0132258_129877402	3300015371	Arabidopsis Rhizosphere	MLSVNQVEKRRQVAGVFLVLGLVIEALCLLWPTPIAFVIFVAIGGLLMFVGIVLYLYSIVSNLEAPE*
Ga0182033_110073002	3300016319	Soil	MLSTDPLQKRQQFAGLFLALGLLTEALCLIWSTPIAFVIFVALGGSFMFIGIAIYLYSLV
Ga0179590_10040754	3300020140	Vadose Zone Soil	MPSVNQLEKRRQVAGVFIVLGLVIEALCLILSTPIAFVIFVAIGGLSMFIGIVLYLYSLVSNLRAPV
Ga0179592_101984241	3300020199	Vadose Zone Soil	MPSVNQLEKRRQVAGIFIVLGLVIEALCLIWSTPIAFVIFVAIGGLFMFVGILLYLYSLVSSAGVSETVRRY
Ga0210407_100587373	3300020579	Soil	MLSVKKLEKRRQVAGIFIVLGLVIEALCLLWSTPIAFVIFVASGGLFMFVGIMLYLYSLVSHAGVSETVG
Ga0210407_109671531	3300020579	Soil	MLSAEQLEKRRQVAGVFIVLGLVVEALCLIWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSDLKAPV
Ga0210403_100588515	3300020580	Soil	MLSMNPLEKRRQFAGLCLAVGLVIEALCLLWATPIAFVLFVAIGGSLMFLGLVLYLTSLVNTGRSDRRPEW
Ga0210403_100951972	3300020580	Soil	MMLSTNPLEKRLQFAGLFLALGLLIEGLCLVWSTPIAFVIFVAIGGSFMFIGVATYLYSLVSTVPPPPTS
Ga0210403_102335043	3300020580	Soil	MLSVNQLEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLSMFVGIILYLYSLVSNLEAPE
Ga0210403_104763352	3300020580	Soil	MLSVNQLEKRRQVAGVFIVLGLVIEALCFIWSTPIAFVIFVALGGLLMFVGIVLYLYSLVSDLKAPV
Ga0210399_100098236	3300020581	Soil	MLSVNQLEKHRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSDLKAPL
Ga0210399_100384714	3300020581	Soil	MLSVNQVEKRRQAAGVFIVLGLVIEALCLIWSTPIAFVIFVAISGLLMFFGIVLYLYSLVSDLKAPV
Ga0210399_110704721	3300020581	Soil	RCEIVERERRQIMLSTNPLQKRQQFAGLFLALGLVTEALCLIWPTPIAFVIFVAIGGSFMFIGIAIYLYSLVSILPPPPAS
Ga0210401_100185243	3300020583	Soil	MLSVNQVEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLSMFVGIVLYLYSLVSNLEAPE
Ga0210401_104251563	3300020583	Soil	MLSANPLDKRRQLAGVCLALGLVVEALCLIWATPIAFVIFVALGGLLMFVGIVLYLSSLVVPVIPHEK
Ga0210404_102208542	3300021088	Soil	MLSVNRVEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLSMFVGIILYLYSLVSNLEAPE
Ga0210404_102316071	3300021088	Soil	MLSANPLDKRRQLAGVCLALGLVVEALCLISATPIAFVIFVALGGLLMFVGIVLYLSSLVVPVIPHEK
Ga0210406_1000070516	3300021168	Soil	MLSVKQLEKRRQVAGIFIVLGLVIEALCLLWSTPIAFVIFVASGGLFMFVGIVLYLYSLVSHAGVSETVG
Ga0210406_100259424	3300021168	Soil	MLSVNQLEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLKVPV
Ga0210406_100922024	3300021168	Soil	MMLSTNPLEKRLQFAGLFLALGLLIEGLCLVWSTPIAFVIFVAIGGSFMFIGVATYLYSL
Ga0210405_103685872	3300021171	Soil	MLSVNQLEKQRQVAGVFIVLGLVIEALCLLWSTPIAFVIFVAIGGLLMFAGIALYLYSLVSSPKASV
Ga0210396_108440762	3300021180	Soil	MLSMNPLEKRRQFAGLCLAVGLVIEALCLLWATPIAFVLFVAIGGSLMFLGLVLYLTSLV
Ga0210396_114635632	3300021180	Soil	MLSANPLDKRRQLAGVCIALGLVVEALCLIWATPIAFVIFVALGGLLMFVGIVLYLSSLVVPVIPHEK
Ga0210388_100055715	3300021181	Soil	MLTVNQLEKRRQVAGVLIVLGLVIEALCLIWSTPIAFVIFVAIGGLFMFAGIVLFLYSLVFNLEARE
Ga0210393_100293843	3300021401	Soil	MLGVNQVEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAVGGLLLFVGIVLYLFSLVFNLETRE
Ga0210385_101248742	3300021402	Soil	MLSPNHLEKLRQIAGIFIVLGLVIEALCLIWSTPIAFVVFVAFGGLLMFLGIALFLYSLVSTHKAPA
Ga0210389_102774643	3300021404	Soil	MLSVNQVEKRRQAAGVFIVLGLVIEALCLIWSTPIAFVIFVAVGGLLLFVGIVLYLFSLV
Ga0210387_106267352	3300021405	Soil	MLSTNPLQKRQQFAGLFLALGLVTEALCLIWPTPIAFVIFVAIGGSFMFIGIAIYLYSLVSILPPPPAS
Ga0210386_107424342	3300021406	Soil	MLSANPLDKRRQLAGICLALGLVVEALCLVWATPIAFVIFVAFGGFLMFVGILLYLSSLVAPT
Ga0210386_114012961	3300021406	Soil	MLSANPLDKRRQLAGVCLALGLVVEALCLIWATPIAFVIFVALGGLLMFVGIVLYLSSLVVPVTPHEK
Ga0210383_10000024108	3300021407	Soil	MLRANSVEKRRQVAGICIVLGLVIEALCLIWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVVHLEAPE
Ga0210383_105466772	3300021407	Soil	MLSTNRFERRRQVAGVCVVLGLVIEALCLLWATPIAFVVFVAIGGSLMFVGIVLYLFSLVNTVVSPE
Ga0210383_108473161	3300021407	Soil	MLSANPLDKRRQLAGICLALGLVVEALCLVWATPIAFVIFVAFGGFLMFVGILLYLSSLVVAVTPHEK
Ga0210391_100005105	3300021433	Soil	MLTVNQLEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGFLMFAGIVLFLYSLVSNLKVPV
Ga0210392_112228191	3300021475	Soil	MMLSTNPLEKRLQFAGLFLALGLLIEGLCLVWSTPIAFVIFVAIGGSFMFIGIAIYLYSL
Ga0210402_104425333	3300021478	Soil	MLSVNQLEKHRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLLMFVGIVLYLSSLVSNLKVPD
Ga0210402_107757602	3300021478	Soil	MLSANPVEKRRQLAGICIVLGLVIEALCLIWSTPIAFVLFVAISGFLMFVGIVLYLYSLVFNLEAPE
Ga0210409_109916321	3300021559	Soil	MLSANPLDKRRQLAGVCIALGLVVEALCLIWATPIAFVIFVALGGLLMFVGIVLYLSSLVVPVTPHEK
Ga0242662_102531311	3300022533	Soil	MLSVNQLEKRRQVAGVFIVLGLVIEALCFIWSTPIAFVIFVALGGLLMFVGIVLYLYSLV
Ga0179589_100150384	3300024288	Vadose Zone Soil	MLTVNQLEKRRQVAGVFIVLGLVIEALCLILSTPIAFVIFVAIGGLSMFIGIVLYLYSLVSNLRAPV
Ga0207692_109999081	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MLSINRLEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLSMFVGIVLYLYSLVSNLKAQD
Ga0207710_103451542	3300025900	Switchgrass Rhizosphere	MLSVNQLERRRQVAGVFIVLGLVIEALCLLWSTPIAFVIFVAIGGLLMFVGVVLYLYSLVSNLDAAE
Ga0207685_102543512	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MLSVNQLEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLKAPV
Ga0207660_103986582	3300025917	Corn Rhizosphere	MLSVNQLEKRRQVAGVFIVLGLVIEALSLIWSTPIAFVIFVAIGGLLMFVGIVLFLYSLVSDLKAPV
Ga0207646_101417304	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MLSTNQVEKRRQVAGVFIVLGLVIEALCLIWTTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLAAPE
Ga0207704_102267611	3300025938	Miscanthus Rhizosphere	MLSANQVEKRRQVAGVFLVLGLVIEALCLIWPTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLAAPE
Ga0207665_100953654	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MLSVNQLEKRRQFAGSFIVLGLVIEALCLIWSTPIAFVIFVAIGGLLMFVGIALYLYSLVSNLKAPV
Ga0207711_109579352	3300025941	Switchgrass Rhizosphere	MLSANQVEKRRQVAGVFIVLGLVIEALCLIWTTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLAAPE
Ga0207703_116247212	3300026035	Switchgrass Rhizosphere	MMLSTNPLEKRLQFEGLFLALGLLIEGLCLIWSTPIAFVIFVAIGGLFMFIGIATYLYSLVSTVPPPPTS
Ga0207641_100696965	3300026088	Switchgrass Rhizosphere	MLSTNQVEKRRQVAGVFIVLGLVIEALCLIWPTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLEAPE
Ga0257171_10013725	3300026377	Soil	MMLSTNPLEKRLQFAGLFLALGLLIEGLCLVWSTPIAFVIFVAIGGSFMFIGIAIYLYSLVSTFPHPPAS
Ga0257171_11003122	3300026377	Soil	MLSVNQLEKRRQVAGVCIVLGLVIEALCLIWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLKAP
Ga0257153_10161262	3300026490	Soil	MLSVNQLEKRRQVAGVFIVLGLVIEALCLIFSTPIAFVIFVAIGGLSMFIGIVLYLYSLVSNLRAPV
Ga0179593_10690152	3300026555	Vadose Zone Soil	MPSVNQLEKRRQVAGIFIVLGLVIEALCLIWSTPIAFVIFVAIGGLFMFAGILLYLYSLVSSAGVSETGR
Ga0179587_104044161	3300026557	Vadose Zone Soil	MPSVNQLEKRRQVAGIFIVLGLVIEALCLIWSTPIAFVIFVAIGGLFMFVGILLYLYSLVSS
Ga0207506_10017124	3300027460	Soil	QVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLLMFVGIVLFLYSLVSDLKAPV
Ga0209772_100779971	3300027768	Bog Forest Soil	MLTVNQLEKRRQVAGVFIALGLVIEALCLIWSTPIAFVIFVAIGGFLMFVGIVLFLYSLVLNLEVSE
Ga0209139_100748972	3300027795	Bog Forest Soil	MLSANHVEKLRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAFGGLLMFAGIVLFLYSLVFNLEAPE
Ga0209811_100766703	3300027821	Surface Soil	MLSVNQLEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLLMFAGIVLYLYSLVSDLKSPV
Ga0209167_103581492	3300027867	Surface Soil	MLSINPLEKRRQFAGLCLAVGLVIEALCLHWATPIAFVLFVAIGGSLMFVGLVLYLTSLVNVSRGDRGPEW
Ga0265354_10008983	3300028016	Rhizosphere	MLTVNQLDKRRQVAGIFIVLGLVIEALCLIWSTPIAFVIFVAIGGFLMFAGIVLFLYSLVSNLKAAV
Ga0268264_100547314	3300028381	Switchgrass Rhizosphere	MLGVNQHEKRRQVAGVFIVLGLVIEAMCLLWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSSLDAPE
Ga0268264_114414782	3300028381	Switchgrass Rhizosphere	RRQVAGVFIVLGLVIEALCLLWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLAAPE
Ga0308309_106457491	3300028906	Soil	MLSTNPLEKRRQFAGICLAVGLVIEALCLLWATPIAFVLFVAIGGSLMFVGIVLYLFSLVNTVVTPE
Ga0222749_100953682	3300029636	Soil	MLSVNRVEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLSMFVGIVLYLYSLVSNLEAPE
Ga0265750_10027392	3300030813	Soil	MLTVNQLEKRRQVAGIFIVLGLVIEALCLIWSTPIAFVIFVAIGGLLMLVGIVLFLSSLVSNLKAQV
Ga0075404_113567112	3300030842	Soil	MLSVNQLEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLLIFVGIVLYLYSLVSDLKV
Ga0265753_10018442	3300030862	Soil	LEGRYVMLTVNQLKKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLFMFLGIVLFLYSLVFNLEAPE
Ga0075399_111504441	3300030967	Soil	MLSVNQVEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVGIGGLLMFIGIVVYLYSLASTFSVPE
Ga0170834_1068599942	3300031057	Forest Soil	MLSVNQVEKRRQVAGVFIVLGLVIEALCLIWSTPISFVIFVTIGGLLMFVGIVLYLYSLVSDLEAQKDIP
Ga0170834_1079009633	3300031057	Forest Soil	MLSTNPLEKRLQFAGLFLALGLLIEGLCLVWSTPIAFVIFVVIGGSFMFIGIAIYLYSLVSTFPHPPAS
Ga0170834_1088215082	3300031057	Forest Soil	MLSTNPLEKRQQFAGLFLALGLLTEALCLIWSTPIAFVIFVAVGGSFMFIGIAIYLHSLVSIFPPPPTS
Ga0170834_1117320962	3300031057	Forest Soil	MISANQLEKRRQVAGVFLVLGLVIEALCLILSTPITFVIFVAIGGLLMFVGIVLYLYSLVSNLKAPV
Ga0170822_122176132	3300031122	Forest Soil	MLSTNPLEKRQQFAGLFLALGLVTEALCLMWSTPIAFVIFVAVGGSFMFIGIAIYLHSLVSIFPPPPTS
Ga0170823_106986641	3300031128	Forest Soil	MLSTNPLEKRLQFAGLFLALGLLIEGLCLVWSTPIAFVIFVAIGGSFMFIGIAIYLYSLVSTFPHPP
Ga0170823_125500681	3300031128	Forest Soil	MLSVNQLEKRRQAAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLLIFVGIVLYLYSLVSDLKVPV
Ga0170824_1077423452	3300031231	Forest Soil	MLSVNQVEKRRQVAGVFIVLGLMIEALCLLWSTPIAFVILVAIGGLLMFVGIVLYLYSLVSNREAPE
Ga0170824_1210708692	3300031231	Forest Soil	MLSTNSLEKRLQFAGLFLALGLLIEGLCLVWSTPIAFVIFVVIGGSFMFIGIAIYLYSLVSTFPHPPAS
Ga0170820_120298392	3300031446	Forest Soil	LSVNQVEKRRQVAGVFIVLGLVIEALCLIWSTPISFVIFVTIGGLLMFVGIVLYLYSLVSDLEAQKDIL
Ga0170820_144552772	3300031446	Forest Soil	MLSVNQLEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGSSMFVGIVLYLYSLVSNLKAPI
Ga0170820_164405241	3300031446	Forest Soil	MLSVEQLEKRRQVAGVFIVLGLVIEALCLIFSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLKAPV
Ga0170819_141995062	3300031469	Forest Soil	MLSVNQLEKRRQVAGVFIVLGLVIEALCLIWSTPISFVIFVTIGGLLMFVGIVLYLYSLVFNLEAPE
Ga0170818_1024098511	3300031474	Forest Soil	MLSVNQLEKRRQVAGVFIVLGLVIEALCLIFSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLKAPV
Ga0170818_1081760521	3300031474	Forest Soil	MMLSTNPLEKQLQFAGLFLALGLLIEGLCLVWSTPIAFVIFVAIGGSFMFIGIAIYLYSLVSTFPHPPAS
Ga0170818_1083215412	3300031474	Forest Soil	MLSVNQVEKRRQVAGVFIVLGLVIEALCLIWSTPISFVIFVTIGGLLMFVGIVLYLYSLVSDLEAQKDIL
Ga0170818_1131507802	3300031474	Forest Soil	MLSVNQLEKRRQVAGIFIALGLVIEALCLIWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSSLKAPV
Ga0170818_1142261291	3300031474	Forest Soil	MLSTNPLEKRRQFAGLFLALGLLTEALCLMWSTPIAFVVFVAIGGSSMFIGIAIYLYSLVSIFPPPPA
Ga0307474_105553362	3300031718	Hardwood Forest Soil	MLSVNQFEKRRQVAGVFIVLGLVIEALCLLWSTPIAFVTFVAIGGLLMFVGIALYLYSLVSDLKVPQ
Ga0307469_100848074	3300031720	Hardwood Forest Soil	MLSANPVEKRRQLAGVCIVLGLVVEALCLTWSTPIAFVLFVTISGLLMFVGIALYLYSLVFNLEAPE
Ga0307469_102856762	3300031720	Hardwood Forest Soil	MLSVEQLEKRRQVAGVFIVVGLVVEALCLIWSTPITFVIFVAIGGFLMFVGIVLYLYSLVPDLKAPV
Ga0307469_108371412	3300031720	Hardwood Forest Soil	MLSAEQLEKRRQVAGVFIVLGLVVEALCLIWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSDLKALV
Ga0307469_121327911	3300031720	Hardwood Forest Soil	KGDRAMMLSTNPLEKRLQFAGLFLALGLLIEGLCLVWSTPIAFVIFVAIGGLFMFIGIATYLYSLVSTVPPPPTS
Ga0307468_1006603491	3300031740	Hardwood Forest Soil	MLSTNPLEKRLQFAGLFLALGLLIEGLCLIWSTPIAFVIFVAIGGLFMFNCIATYLYSLV
Ga0307475_100538834	3300031754	Hardwood Forest Soil	MLSVNQLEKRRQVAGISIVLGLLIEALCLIWATPIAFVIFVAIGGLLMFVGIVLYLYSLVSDLKAPV
Ga0307475_100812563	3300031754	Hardwood Forest Soil	MLSVNQVEKRRQVAGVFIVLGLVIEALCLIWSTPITFVIFVAIGGLLLFVGIVLYLYSLVSNLEAPE
Ga0307475_107945052	3300031754	Hardwood Forest Soil	MMLSANQLEKRRQVAGVFIVLGLVIEALCLIWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSDLKAPV
Ga0307475_112967192	3300031754	Hardwood Forest Soil	MLSVNQLEKRRQVAGVFIVLGLVVEALCLIWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVPDLKAPV
Ga0307473_105957672	3300031820	Hardwood Forest Soil	MLSANQVEKRRQVAGVFIVLGLVIEALCLIWPTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLEAPE
Ga0307479_100614732	3300031962	Hardwood Forest Soil	MLSVNQLEKRRQVASVFIVLGLVIEALCLIWSTPIAFVIFVTIGGLLMFFGIVLYLYSLVSNLEAPE
Ga0307470_103297432	3300032174	Hardwood Forest Soil	MLSVNQLEKRRQVAGVFIALGLVIEALCLIWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSNLKDPV
Ga0307471_1023106972	3300032180	Hardwood Forest Soil	MLSAEQLEKRRQVAGVFIVLGLVVEALCLIWSTPIAFVIFVAIGGLLMFVGIVLYLYSLVSTQG
Ga0306920_1002677272	3300032261	Soil	MLSTDPLQKRQQFAGLFLALGLLTEALCLIWSTPIAFVIFVALGGSFMFIGIAIYLYSLVSILPPPPAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F043003

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences