Metagenome Family F043049

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F043049
Family Type	Metagenome
Number of Sequences	157
Average Sequence Length	60 residues
Representative Sequence	MKFRVSLFLLTLALAASSTLTAHASACSNSTIQGSYAFTIHGTVFLPDGSTLLIDG
Number of Associated Samples	118
Number of Associated Scaffolds	157

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.35 %
% of genes near scaffold ends (potentially truncated)	94.27 %
% of genes from short scaffolds (< 2000 bps)	84.71 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.994 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.478 % of family members)
Environment Ontology (ENVO)	Unclassified (33.121 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.223 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 27.38% β-sheet: 11.90% Coil/Unstructured: 60.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 157 Family Scaffolds
PF00486	Trans_reg_C	36.94
PF07676	PD40	5.73
PF00072	Response_reg	1.27
PF13414	TPR_11	1.27
PF13650	Asp_protease_2	1.27
PF13181	TPR_8	1.27
PF07638	Sigma70_ECF	1.27
PF03169	OPT	0.64
PF03160	Calx-beta	0.64
PF02371	Transposase_20	0.64
PF01865	PhoU_div	0.64
PF00012	HSP70	0.64
PF04055	Radical_SAM	0.64
PF05163	DinB	0.64
PF13751	DDE_Tnp_1_6	0.64
PF12779	WXXGXW	0.64
PF06271	RDD	0.64
PF03626	COX4_pro	0.64

COG ID	Name	Functional Category	% Frequency in 157 Family Scaffolds
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.27
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.64
COG1297	Predicted oligopeptide transporter, OPT family	General function prediction only [R]	0.64
COG1392	Phosphate transport regulator YkaA, distantly related to PhoU, UPF0111/DUF47 family	Inorganic ion transport and metabolism [P]	0.64
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.64
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.64
COG3125	Heme/copper-type cytochrome/quinol oxidase, subunit 4	Energy production and conversion [C]	0.64
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.99 %
Unclassified	root	N/A	7.01 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.99 %
Unclassified	root	N/A	7.01 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.99 %
Unclassified	root	N/A	7.01 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	80.89 %
Unclassified	root	N/A	7.01 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.91 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	70.70 %
Unclassified	root	N/A	7.01 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.37 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.91 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	70.70 %
Unclassified	root	N/A	7.01 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.37 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.91 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.64 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	70.70 %
Unclassified	root	N/A	7.01 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.37 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.91 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.64 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	70.70 %
Unclassified	root	N/A	7.01 %
Caballeronia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia	1.27 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.27 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.91 %
Acidisarcina	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina	0.64 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.64 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.64 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	70.70 %
Unclassified	root	N/A	7.01 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1.27 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.27 %
Caballeronia glathei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia glathei	1.27 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	0.64 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.64 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.64 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0955223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300000789\|JGI1027J11758_11665251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300001593\|JGI12635J15846_10643031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300001661\|JGI12053J15887_10629299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300005167\|Ga0066672_10363243	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300005167\|Ga0066672_10856084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300005174\|Ga0066680_10425992	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	841	Open in IMG/M
3300005179\|Ga0066684_10187265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1333	Open in IMG/M
3300005179\|Ga0066684_10991284	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300005184\|Ga0066671_11031615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300005434\|Ga0070709_10023295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3633	Open in IMG/M
3300005434\|Ga0070709_11581501	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300005435\|Ga0070714_101522978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300005445\|Ga0070708_100269375	All Organisms → cellular organisms → Bacteria	1602	Open in IMG/M
3300005445\|Ga0070708_100385527	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1321	Open in IMG/M
3300005458\|Ga0070681_10375126	All Organisms → cellular organisms → Bacteria → Acidobacteria	1333	Open in IMG/M
3300005467\|Ga0070706_102144274	Not Available	505	Open in IMG/M
3300005468\|Ga0070707_100128438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2463	Open in IMG/M
3300005526\|Ga0073909_10329390	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	702	Open in IMG/M
3300005542\|Ga0070732_10172808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1289	Open in IMG/M
3300005542\|Ga0070732_10843450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300005548\|Ga0070665_102096141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300005554\|Ga0066661_10233939	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1138	Open in IMG/M
3300005554\|Ga0066661_10649528	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	622	Open in IMG/M
3300005559\|Ga0066700_10504444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300005560\|Ga0066670_10228830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1123	Open in IMG/M
3300005564\|Ga0070664_100510527	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300005564\|Ga0070664_101224519	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300005764\|Ga0066903_104631127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300005952\|Ga0080026_10095076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300006028\|Ga0070717_10041955	All Organisms → cellular organisms → Bacteria	3732	Open in IMG/M
3300006028\|Ga0070717_10357445	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300006032\|Ga0066696_10770475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	615	Open in IMG/M
3300006172\|Ga0075018_10859932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia glathei	501	Open in IMG/M
3300006755\|Ga0079222_11371633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300006893\|Ga0073928_10079330	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2816	Open in IMG/M
3300006954\|Ga0079219_10252316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia glathei	1051	Open in IMG/M
3300007258\|Ga0099793_10118840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1235	Open in IMG/M
3300007265\|Ga0099794_10317012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300009012\|Ga0066710_103036776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300009038\|Ga0099829_10160571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1800	Open in IMG/M
3300009038\|Ga0099829_10390030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1150	Open in IMG/M
3300009038\|Ga0099829_10646440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300009038\|Ga0099829_11439572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300009088\|Ga0099830_11742618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300009089\|Ga0099828_11165388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300009101\|Ga0105247_11590654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300009137\|Ga0066709_101643063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	916	Open in IMG/M
3300009137\|Ga0066709_102489459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300009143\|Ga0099792_10509640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300009174\|Ga0105241_10767415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	885	Open in IMG/M
3300009551\|Ga0105238_10364474	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300010373\|Ga0134128_11832991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300010397\|Ga0134124_12288066	Not Available	581	Open in IMG/M
3300011271\|Ga0137393_11172948	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300011271\|Ga0137393_11560672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300012189\|Ga0137388_10638688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	989	Open in IMG/M
3300012202\|Ga0137363_10215646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1546	Open in IMG/M
3300012202\|Ga0137363_11045228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300012202\|Ga0137363_11223870	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300012205\|Ga0137362_10956397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300012205\|Ga0137362_10987813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300012209\|Ga0137379_10503031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1120	Open in IMG/M
3300012210\|Ga0137378_11766313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300012211\|Ga0137377_10164276	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	2130	Open in IMG/M
3300012354\|Ga0137366_10287117	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1213	Open in IMG/M
3300012361\|Ga0137360_11123128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300012361\|Ga0137360_11666790	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300012363\|Ga0137390_10118001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2627	Open in IMG/M
3300012363\|Ga0137390_11009996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300012683\|Ga0137398_11073563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300012925\|Ga0137419_10051502	All Organisms → cellular organisms → Bacteria	2658	Open in IMG/M
3300012929\|Ga0137404_10050898	All Organisms → cellular organisms → Bacteria → Acidobacteria	3173	Open in IMG/M
3300012930\|Ga0137407_12082647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300012944\|Ga0137410_11263292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300012944\|Ga0137410_11738906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300012986\|Ga0164304_11194125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300013100\|Ga0157373_10424349	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	955	Open in IMG/M
3300013100\|Ga0157373_11116716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300014829\|Ga0120104_1115351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300015053\|Ga0137405_1416819	All Organisms → cellular organisms → Bacteria → Acidobacteria	4085	Open in IMG/M
3300015372\|Ga0132256_102841961	Not Available	582	Open in IMG/M
3300015373\|Ga0132257_101686316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300015374\|Ga0132255_103530954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300016294\|Ga0182041_10098832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2138	Open in IMG/M
3300016371\|Ga0182034_10048528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2790	Open in IMG/M
3300016422\|Ga0182039_12067127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300018482\|Ga0066669_10098031	All Organisms → cellular organisms → Bacteria	2027	Open in IMG/M
3300018482\|Ga0066669_10944183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300019881\|Ga0193707_1199582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300020579\|Ga0210407_10094587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2265	Open in IMG/M
3300020582\|Ga0210395_10448158	Not Available	971	Open in IMG/M
3300020582\|Ga0210395_10563375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	856	Open in IMG/M
3300020582\|Ga0210395_11396742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300020583\|Ga0210401_11220684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300021088\|Ga0210404_10148021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1228	Open in IMG/M
3300021168\|Ga0210406_11211510	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300021170\|Ga0210400_11535814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300021178\|Ga0210408_11152579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300021420\|Ga0210394_10207012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1711	Open in IMG/M
3300021478\|Ga0210402_10382245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1307	Open in IMG/M
3300021478\|Ga0210402_11979953	Not Available	508	Open in IMG/M
3300021559\|Ga0210409_10951578	Not Available	733	Open in IMG/M
3300021559\|Ga0210409_11292807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300025900\|Ga0207710_10685036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300025915\|Ga0207693_10178113	All Organisms → cellular organisms → Bacteria → Acidobacteria	1673	Open in IMG/M
3300025915\|Ga0207693_11447298	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300025922\|Ga0207646_10550640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1037	Open in IMG/M
3300025929\|Ga0207664_11169049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300025932\|Ga0207690_10790343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300025939\|Ga0207665_10797349	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300025941\|Ga0207711_11794271	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300026294\|Ga0209839_10019231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2705	Open in IMG/M
3300026324\|Ga0209470_1204716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300026328\|Ga0209802_1140881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300026328\|Ga0209802_1322589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300026482\|Ga0257172_1112762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300026542\|Ga0209805_1102607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1364	Open in IMG/M
3300027610\|Ga0209528_1069239	Not Available	781	Open in IMG/M
3300027616\|Ga0209106_1068917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300027651\|Ga0209217_1083997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	922	Open in IMG/M
3300027674\|Ga0209118_1083337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	914	Open in IMG/M
3300027738\|Ga0208989_10004391	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4717	Open in IMG/M
3300027738\|Ga0208989_10017274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2479	Open in IMG/M
3300027783\|Ga0209448_10258054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300027842\|Ga0209580_10431465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300027846\|Ga0209180_10775815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300027862\|Ga0209701_10713064	Not Available	515	Open in IMG/M
3300027875\|Ga0209283_10283911	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300028536\|Ga0137415_10094618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2841	Open in IMG/M
3300028536\|Ga0137415_10109318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2614	Open in IMG/M
3300028536\|Ga0137415_10334343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1318	Open in IMG/M
3300028536\|Ga0137415_11123230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300028673\|Ga0257175_1000745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3096	Open in IMG/M
3300028828\|Ga0307312_10050298	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2487	Open in IMG/M
3300031057\|Ga0170834_107119427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300031057\|Ga0170834_113301933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300031231\|Ga0170824_112545273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	915	Open in IMG/M
3300031241\|Ga0265325_10293014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300031681\|Ga0318572_10235046	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1076	Open in IMG/M
3300031720\|Ga0307469_10073412	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2280	Open in IMG/M
3300031720\|Ga0307469_10274879	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300031720\|Ga0307469_11353939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300031720\|Ga0307469_12099209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300031720\|Ga0307469_12241146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300031740\|Ga0307468_100494152	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	968	Open in IMG/M
3300031740\|Ga0307468_101058529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300031764\|Ga0318535_10404772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300031820\|Ga0307473_10998358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300031981\|Ga0318531_10479617	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300032180\|Ga0307471_101758777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300032205\|Ga0307472_101441830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300032205\|Ga0307472_101976952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300032205\|Ga0307472_102116124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.17%
Host-Associated	Host-Associated	10.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.26%
Plants	Host-Associated → Plants	10.83%
Aquatic	Environmental → Aquatic	1.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.27%
Freshwater	Environmental → Aquatic → Freshwater	0.64%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.64%
Sediment	Environmental → Aquatic → Sediment	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.70%
Loam	Environmental → Terrestrial → Soil → Loam	15.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.64%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.01%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.27%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.64%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.64%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.64%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.18%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.27%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.27%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.27%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.64%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.64%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.64%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.64%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.64%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.64%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_09552231	2228664022	Soil	MKFRIPLFLLTLALAASSTLAAHAGACSNMTIKGTYASTIHATIFLPDGSTLLLDGLAKQTFDGNGSFTQVDAVAANGNLP
JGI1027J11758_116652512	3300000789	Soil	MKSRISLLLMSLALAASSTLIAHASSCSDSTIIGTYAFTLHGTIFLPGGSTLLIDGIAKQTYDGQGNMTQVDAVATNGVLTPGWHLARALTQ*
JGI12635J15846_106430312	3300001593	Forest Soil	MKSRISLFLVTLALAASSTLTAHASACSDWTLKGTYAFTIHGTIFLPGGAPPLLVDGVAKTTFDGNGNLTQLDAVAIDGNVAPGWRPSTGNY
JGI12053J15887_106292991	3300001661	Forest Soil	MKFRVSFFLLTLVLAASSSSTAHASACSNSTIRGTYAFTIHGAIFLP
Ga0066672_103632431	3300005167	Soil	MKSRISLLLVTLALAASSTLTARASSCSDSTISGTYAFTLHGTIFLPDGSTLLIDGIAKQTYDGKGNMS
Ga0066672_108560841	3300005167	Soil	MRLRISLLLLTFALAVSSTLTAHASACNNSTIRGSYAFTIHGTIFL
Ga0066680_104259921	3300005174	Soil	MKSRISLFLLTLALAASSTLTAHASECSNLTIKGTYAFTIHGTVFLPNGFTLLIDG
Ga0066684_101872651	3300005179	Soil	MKPRISLLLLAFALAVSSSLTAHASACSNSTVRGSYAFTIHGTLFLPNGSTLLIDGI
Ga0066684_109912842	3300005179	Soil	MKSRISLLLVTLALAASSTLTARASSCSDSTISGTYAFTLHGTIFLPDGSTLLIDGIAKQTYDGKGNM
Ga0066671_110316152	3300005184	Soil	MKSRIFLLLLTLVLAASSTLTAHASSCSDSTIRGTYAFTLHGTIFLPDGTTLLVDGIAKQTYDGKGNM
Ga0070709_100232951	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKFRNSPFLLALALVVSSPLMSHASACSNSTIRGSYAFTIHG
Ga0070709_115815012	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKSRISLLLLTFALAASSTLMAHAGCTNATIQGTYAFTIHGTILTQDGSTLLVDGLAKTTFDGKGNLT
Ga0070714_1015229782	3300005435	Agricultural Soil	MKSRISLFLLTLALAASSTLTAHAACNNLTIKGTYAFTIHGTVFLPGGFT
Ga0070708_1002693751	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKFRTSLLLLTLALAASSTLTAHAACNNLTIKGTYAFTIHGTVF
Ga0070708_1003855272	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKSRISLLLLTFALAASSTLTAHAACNNLTIKGTYAFTIHGTVFLPGGFTLLIDGIDKVTFDGDGNLTQVDAVAT
Ga0070681_103751262	3300005458	Corn Rhizosphere	MKSRISLLLLTFALAASSTLMAHAGCTNATIQGTYAFTIHGTILNQDGSTLLVDGLAKTTFDGK
Ga0070706_1021442741	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKFRNSPFLLTIALVASSTLMSHASTCSNSTIRGSYAYTIH
Ga0070707_1001284384	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKFRLLSFLLTLVVVGFQSSTAHASACSNLTIKGTYAFTIHGTVFLPGGA
Ga0073909_103293903	3300005526	Surface Soil	MKFRISLFWLTLALAASSTLAAHAGACSNMTIKGTYASTIHATIFLPDGSTLLLDGLAKQTYDGNGNF
Ga0070732_101728082	3300005542	Surface Soil	MKFRNSPFLLALALIASSPLMSHASACSNSTIRGSYAFTIHGTIFLPNGATLLIDGIAK
Ga0070732_108434501	3300005542	Surface Soil	MKSRISLLLLTFALAASSTLTAHAGCTNATIQGTFAFTIHGTILNQDGSTLLVDGLAKT
Ga0070665_1020961411	3300005548	Switchgrass Rhizosphere	MRHRILLYLSVLALAVLSTFTAHASACSNATIQGTYAFTIRGTIFRPNGSTLLIDGIARETFDGRGNE
Ga0066661_102339392	3300005554	Soil	LKFRISLFLLTLALAASLTSTAHASACSNSTIRGTYAITIRGTIFLPDGSTLLIDGLAKTTFDGNGNLTQVDAVATNGHLA
Ga0066661_106495281	3300005554	Soil	MKFRTSLLLLTFALAASSTLTAHAACNNLTIKGTYAFTIHGTVFLPGGFTLLIDGIDKVTFDGDGNLTQVD
Ga0066700_105044441	3300005559	Soil	MKSRISLFLLTLTLAASSTLTAHASACSNLTIKGTYAFTIHGTVFLPNGFTLLIDG
Ga0066670_102288301	3300005560	Soil	MKSRISLLLLMIALAASSTLTAHAACNNLTIKGTYAFTIHGTVFLPGGFTLLIDGI
Ga0070664_1005105271	3300005564	Corn Rhizosphere	MKSRISLFLLGLALAASSTLTAHASACSNSTIRGSYAFTIHGTLFLPNGLTVVVDGIDKITFD
Ga0070664_1012245191	3300005564	Corn Rhizosphere	MKSRISLLLLTFALAASSTLMAHAGCTNATIQGTYAFTIHGTILNQDGSTLLVDGLAKTTFDGKGNLTQLDAVAVN
Ga0066903_1046311271	3300005764	Tropical Forest Soil	MKFCNSPFLLTLAVIVSSPLMSHARACSNSSIRGTYAFTIHGTVFLPNGSTLLVDGIAKE
Ga0080026_100950761	3300005952	Permafrost Soil	MKSRISLFLLILALAASSTLTVHASACTNSTIRGTYASTIHATIFLPDG
Ga0070717_100419551	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VKFRISLFVLTLALTVSSTLTAHASACSNSTIRGTYASTIHATIFLPDGSTLLLDGLAKQTFDGNGNF
Ga0070717_103574452	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKSRISLLLLTLALAASSTVTAHARACSNLTIKGTYAFTIHGTVFLPGGAPPLLVDGLAKPTFDGDGDLTQLDAVAVNGNVAPGWRLSTGTYSVNP
Ga0066696_107704751	3300006032	Soil	MRLRISLLLLTFALAVSSTLTAHASACNNSTIRGSYAFTIHGTIFLPNGSTLLIDGIAKETFDGEGGETQVDA
Ga0075018_108599321	3300006172	Watersheds	VKFRISLFLLTVALAVSSTLTAHASACSNSTIQGTYAFTIHGTLFL
Ga0079222_113716331	3300006755	Agricultural Soil	MKFRNSPFLLTLALIVSSPLMSHASACSNSTIQGSYAFTIHGTLFLPNGSTLVIDGIDKVTFDGNGNFTQVDAVATNGHLAAPGWRPGT
Ga0073928_100793301	3300006893	Iron-Sulfur Acid Spring	MKFRISLFLLTLLLAVSSSLTAHASGCSNSTIRGSYAFTIHGTIFLPDGSTLVVDGIDK
Ga0075426_100756162	3300006903	Populus Rhizosphere	MKFRTSLFLLTLALAASSPLTAHANVCNNATIKGTYASSLHGQVFLPDGTRLILAGIVKSTN
Ga0075436_1010831572	3300006914	Populus Rhizosphere	MKFRTSLFLLTLALAASSPLTAHANVCNNATIKGTYASSLHGQVFLPDGTRLILAGIVKSTND
Ga0079219_102523161	3300006954	Agricultural Soil	MRFRTPLLLSILALAASSTLTARASACSNSTIRGTYAFTIHGMI
Ga0099793_101188403	3300007258	Vadose Zone Soil	MKSRISLFLLTLALAASSTLTTHASACSNSTIQGSYAFTIHGTVFLPDGSTLLIDDIAKQTFDGKGNLTQVD
Ga0099794_103170122	3300007265	Vadose Zone Soil	MKSRISLFLLTLALAASSTLTAHAACNNLTIKGTYAFTIHGTVFLPGGFTLLIDGIDKVT
Ga0066710_1030367761	3300009012	Grasslands Soil	MKSRISLLLVTLALAASSTLTARASSCNDSTISGTYAFTLH
Ga0099829_101605713	3300009038	Vadose Zone Soil	MKFRISLFLLALALAASSTLTAHASASSNLTIKGTYAFTIHGTVFLPGGSTLLIDGLAKPTFDGNGNIGNTSIAIP*
Ga0099829_103900301	3300009038	Vadose Zone Soil	MKSRISLFLLTLALTASSTLTAHASACSNLTIKGTYAFTIHGTVFLPNGFTLLIDGIDKVTFDGDGNLTQVDAVATNGNLPPGWRP
Ga0099829_106464401	3300009038	Vadose Zone Soil	MKFRISLLLLTLALAASSTLAAHAGACSNSTIRGTYASTIHATIFLPDG
Ga0099829_114395721	3300009038	Vadose Zone Soil	MKFRISLFLLTFALVASSTLTAHASACSNSTIQGTYAFTIHGQVFLPD
Ga0099830_117426181	3300009088	Vadose Zone Soil	MKFRISLFVLTLALAASSTLTAHASACTNSTIQGSYAFTIHGTVFLPDGSTLLIDGLAKTTFDGKG
Ga0099828_111653882	3300009089	Vadose Zone Soil	MKSRISLFLLTLALAASSTLTAHAACNNLTIKGTYAFTIHGTVFLPGGF
Ga0105247_115906542	3300009101	Switchgrass Rhizosphere	MKFRNSPFLLTLALIVSSPLISHASACSNSTIRGSYAFTIHG
Ga0066709_1016430631	3300009137	Grasslands Soil	MKSRISLFLLTLALAASSTLTAHASECSNLTIKGTYAFTIHGTVFLPNGFTLLIDGI
Ga0066709_1024894591	3300009137	Grasslands Soil	MKFHNSPFLLTLALIVSSPLMSHASACSNSTSRGRYAFTIAGTISLPNGSTLLIDGIAKESFDGQGNETQVDAVAPNGMLTPGWHPGTGSYSVNPD
Ga0099792_105096401	3300009143	Vadose Zone Soil	MKSRISFFLLTLVLAASSTLTAHAIACSNLTIKGTYAFTIHGTVFIPGGPTLLIDGIDKVTFDGDGNLTQ
Ga0105241_107674151	3300009174	Corn Rhizosphere	MKFRNSPFLLALALVVSSPLMSHASDCSNSSIRGSYAFTIHGSIVLPDGSTLLVDGLAKQTFDGNGNFTQVDAVAVGGNL
Ga0105238_103644743	3300009551	Corn Rhizosphere	MKSRISLFLLGLALAASSTLTAHASACSNSTIRGSYAFTIHGTLFLPNGLTVVVDGIDKITFDGKGNFTQLD
Ga0134128_118329912	3300010373	Terrestrial Soil	MKSRISLLLLTFALAASSTLMAHAGCTNATIQGSYAFTIHGTILNQDGSTLLV
Ga0134124_122880662	3300010397	Terrestrial Soil	MKFRNSPFLLALALVVSSPLMSHASDCSNSTIRGSYAFTIHGS
Ga0137393_111729482	3300011271	Vadose Zone Soil	MKFRNSPFLLTLALIVSSPLMSHASACSNSTIRGSYAFTIHGTIFLPNGSTLLIDG
Ga0137393_115606721	3300011271	Vadose Zone Soil	MKFRISLFLLALALAASSTLTAHASASSNLTIKGTYAFTIHGTVFLPGGSTLLIDGLAKPTFDGNGN
Ga0137388_106386881	3300012189	Vadose Zone Soil	MKSRISLFLLTLALAASSTLTAHASACSNSTIQGSYA
Ga0137363_102156461	3300012202	Vadose Zone Soil	MKSRISLFLLTLALAASSTLTAHASACSNSTIQGSYAFTIHGTVFLPDGSTLLIDGIAKQTFD
Ga0137363_110452282	3300012202	Vadose Zone Soil	MKSRISLFLLTLALAASSTLTTHASACSNSTIQGSYAFTIHGTVFLPDGSTLLIDGIAKQTFDGKGNL
Ga0137363_112238701	3300012202	Vadose Zone Soil	VKFRISLFVLTLALAASSTLAAHAGACSNSTIRGTYASTIHATIFLPDGSTLLID
Ga0137362_109563971	3300012205	Vadose Zone Soil	MKFRILFFLLTLVVVGSQSLTAHASSCSNGTIRGSYAFTIHGQVFLPNG
Ga0137362_109878131	3300012205	Vadose Zone Soil	MKSRISLLLLTLALAASSTLTAHASACSNSTIRGTYASTIHATIFLPDGSTLLLD
Ga0137379_105030311	3300012209	Vadose Zone Soil	MKPRIALLLLTFVLAASSTLTAHASNCSNMTLKGTYANSIHGQIFLPDGTTLLVAGVAMATYDGEGNST
Ga0137378_117663131	3300012210	Vadose Zone Soil	LKFRISLFLLTLALAASLTSTAHASACSNSTIRGTYAITIRGTIFLPDGSTLLIDGLAKTTFDGNGNLTQVDAVATN
Ga0137377_101642761	3300012211	Vadose Zone Soil	MKFRISLFLLTLVLAASSTLTAHASDCSNMTLKGTWANSIHGQLFLPDGSTLLIDGIV
Ga0137366_102871171	3300012354	Vadose Zone Soil	MKSRISLLLLTLTLATSSTLTAHASNCSNMTLKGTYANSIHGQIFLPDGTTLLVAGVAMATYDGEGNSTG
Ga0137360_111231281	3300012361	Vadose Zone Soil	MKFRTSCLLTLILAASSSVMAHASACSNSTIQGTFAFT
Ga0137360_116667902	3300012361	Vadose Zone Soil	LKFHISLFVLTLALAASSTLTAHASGCSNSTITGTYAFTIHGTVFLPGGFTLLIDGIDKVTF
Ga0137390_101180015	3300012363	Vadose Zone Soil	MKFRISLFVLTLALAASSTLTAHASACTNSTIQGSYAFTIHGTVFLPDGSTLLIDGLAKTTFDGKGNIT*
Ga0137390_110099961	3300012363	Vadose Zone Soil	MKFRILFFLLTLVVVGSQSSTAHAACNNLTIKGTYAFTVHGTVFLPGGFTLLID
Ga0137373_107433691	3300012532	Vadose Zone Soil	MRFRTSLFLLTLALAASSPLTANANANANANACNNTTIKGTYASSLHGQVFL
Ga0137398_110735631	3300012683	Vadose Zone Soil	MKSRISLFLLTLALAASSTLTAHAIACSNLTIQGTYAFTLHGTIFLPDTSTLLI
Ga0137419_100515021	3300012925	Vadose Zone Soil	MKFRNSPFLLALALVASSTLMSHASTCSNSTIRGSYAFTIHGQVFLPN
Ga0137404_100508985	3300012929	Vadose Zone Soil	MKFRNSPFLLTLALIVSSPLMSHASACSNSIIRGSYAFTIHGTIFLP
Ga0137407_120826471	3300012930	Vadose Zone Soil	MKSRISLLLMAIALAASSTLTAHASSCSDSTIIGTYAFTLHGTIFLPGGSTLLIDGIAKQTYDGQGNMTQVDAVATNGVLTP
Ga0137410_112632921	3300012944	Vadose Zone Soil	MKSRISLLLLALALAASSTLTAHASSCSDSTISGTYAFTLHGTIFIPDGPTL
Ga0137410_117389062	3300012944	Vadose Zone Soil	MKSRISLLLMTLALAASSTLTAHASSCSDSTIIGTYAFTLHGTIFLPDGSTLLIDGIAKQTYDGQGNMTQVDAVATNGVLTPGWR
Ga0164304_111941251	3300012986	Soil	MRFRTPLLLSILALAASSTLTARASACSNSTIRGTYAFTIHGMIFLPNGSTLLIDGIAKETF
Ga0157373_104243492	3300013100	Corn Rhizosphere	MKSRISLLLLTFALAASSTLMAQAGCTNATIQGTYAFTIHGTILN
Ga0157373_111167162	3300013100	Corn Rhizosphere	MQFRYSPLLLTLALIVSTPLMSHANACSDSTIRGSYAFTIHGTLFLPNGSTLLVDGIDKITFDGKGNFEQVDAVAMNG
Ga0120104_11153511	3300014829	Permafrost	MKSRISLFLLTLALAASSTMTAHAKACSNSTIRGSYTFTLLGTVFVPDGSTLPLDGLVKQTFDGNENFTQVDAVAVGGN
Ga0137405_14168195	3300015053	Vadose Zone Soil	MKLRMLLFLSTLAAVGFQSTAYASPCGNSTIRGSYALTIHGTLFLPDGLPCSLMASTR*
Ga0132256_1028419611	3300015372	Arabidopsis Rhizosphere	MNFRNSPFLLALALVVSSALMAHASPCSNSTIRGS
Ga0132257_1016863162	3300015373	Arabidopsis Rhizosphere	MNSRISLLLLTLALAASSTLTAHAGCTNASIQGTYAFTIHGTILNQDGSTLLVDGLARTTFDGKGNLTQLDAVAVN
Ga0132255_1035309541	3300015374	Arabidopsis Rhizosphere	MKLRNSPFLLALALIVSSPLMSHASACSNSTIRGSYAFTIHGTLFLPNGATLVVTGIDKVTFDGKGNFTQLDAVSM
Ga0182041_100988321	3300016294	Soil	MNIHTAVRLLVLALATSSVLTAHASVCSNKTIQGTYAFTIHGTILVPDGSSLLV
Ga0182034_100485281	3300016371	Soil	MNIHTAVRLLVLALATSSVLTAHASVCSNKTIQGTYAFTIHGTILVPDGSSLLVNGLART
Ga0182039_120671271	3300016422	Soil	MKFCNSPFLLTLAVIVSSPLMSHARDCSNSSIRGTYAFTIHGTVFLPNGSTLLVDGIAKETFDGEGNETQV
Ga0066669_100980311	3300018482	Grasslands Soil	MKFHNSPFLLTLALIVSSPLMSHASACSNSTIRGSYAFTIHGTLFLPNGSTLVVDGIDKVTFDGNGNFTQ
Ga0066669_109441831	3300018482	Grasslands Soil	MKFRTSLLLLTFALAASSTLTAHAACNNLTIKGTYAFTIHGTVFLPGGFTLLIDGIDKVTFDGDGNLTQV
Ga0193707_11995821	3300019881	Soil	MKIRVWLFLLTLALTATSTLTAHAKACGNETIKGSYAATIHGTLFLPDGSTLLIDGISKATFDGKGN
Ga0210407_100945871	3300020579	Soil	MKFRVSLFLLTLVLAASSTSTAHASACSNSTIRGRYAFTIHGTIFLPGGGSTLVVDGIDKVTYDGN
Ga0210395_104481581	3300020582	Soil	MKLRNSPFLLALALVVSSPLTSHASDCSNSTIRGSYAFTI
Ga0210395_105633751	3300020582	Soil	MKSRISLFLLTLALAASSTLTAHAACNNLTIKGTYAFTIHGTVFLPGGFTLLIDGI
Ga0210395_113967422	3300020582	Soil	MKSRISLLLLTFALAASSTLTAHALCSNATIQGTYAFTIHGTILNS
Ga0210401_112206842	3300020583	Soil	VKFRISLFLLTVALAASSTLTAHASACSNSTIQGTYAFTIHGTLFLPDGS
Ga0210404_101480213	3300021088	Soil	MKSRISLFLLTLALAASSTLTAHAACNNLTIKGTYAFTIHGTVFLPGGFTLLIDGIDKVTFDGDGNLTQVDAVATNGNLPPGWRPGTGT
Ga0210406_112115101	3300021168	Soil	MKFRISLVLLTIALASSAVTARASCTNSTIKGTYAFTIHGTVFLPGGAPPLLVD
Ga0210400_115358141	3300021170	Soil	MKFRILFFLLTLVVVGSQSSTAHASACSNSTIRGSYAFTIHGTLFLPNGSALVVD
Ga0210408_111525792	3300021178	Soil	MLLINRTMKFRNSPFLLAVALILSSPLMAHASACSNSTIRGSYAFTIHGTVFLQDGSTLLIDG
Ga0210394_102070121	3300021420	Soil	MKLRNSPFLLALALVVSSPLTSHASDCSNSTIRGSYAFTIHGTLFVPNGS
Ga0210402_103822451	3300021478	Soil	MKFRISLFLLTFALVASSTSTAHASACSNSTIQGTYAFTIHG
Ga0210402_119799531	3300021478	Soil	MKFRISLAILTLVLAASSTLTAHAGCTNATIKGSYAFTIRGQVLLPNGAVLLIDGLARTTYDGEG
Ga0210409_109515781	3300021559	Soil	MKFRNSPFLLALALVVSSPLMSHASACSNSTIQGSYAFTIHGTLFLPNGSTLVIDGI
Ga0210409_112928072	3300021559	Soil	MKFRISLAVLTLVLAASSTLTAHANCTNATIKGSYAFTIHGQVLLQNGAVLLIDGLAR
Ga0207710_106850362	3300025900	Switchgrass Rhizosphere	MKFRNSPFLLTLALIVSSPLISHASACSNSTIRGSYAFTIHGT
Ga0207693_101781131	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKSRISLLLLTFALAASSTLVAHAGCTNATIQGSYAFTIHGTILTQDGSTVLVDGLAKTTFDGKGNLTQLDAVAVNG
Ga0207693_114472982	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VKFRISLFVLTLALAASSLTAHASACSNSTIQGSYAFTIHGTVFLP
Ga0207646_105506401	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKFRLLSFLLTLVVVGFQSSTAHASACSNLTIKGTYAFTIHGTVFLPGG
Ga0207664_111690492	3300025929	Agricultural Soil	MKSRISLFLLTLALAASSTLTAHAACNNLTIKGTYAFTIHGTVFLPGGFTLLIDGIDKVTFD
Ga0207690_107903431	3300025932	Corn Rhizosphere	MKFRNSPFLLALALVVSSPLMSHASACSNSNIRGSYALTIHGTLFLPNGSTLILDGIDKITFDG
Ga0207665_107973491	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKPRISLLLLTLALVTSSSLTAHAGVCSDSTISGTYAFTLHGTIFLPD
Ga0207711_117942712	3300025941	Switchgrass Rhizosphere	MKSRISLFLLGLALAASSTLTAHASACSNSTIRGSYAFTIHGTLFLPN
Ga0209839_100192312	3300026294	Soil	MKSRISLFLLTLALAVSSTVTAHASACNNWTIQGTYAGTIHGQIFLPDGSALLIDG
Ga0209470_12047162	3300026324	Soil	LKFRISLFLLTLALAASLTSTAHASACSNSTIRGTYAITIRGTIFLPDGSTLLIDGLAKTTFDGNGNLTQV
Ga0209802_11408811	3300026328	Soil	LKFRISLFLLTLALAASLTSTAHASACSNSTIRGTYAITIRGTIFLPDGSTLLIDGLAKTTFDGNGNLTQVDAVATNGHLAPGWRPGTGTYSVSP
Ga0209802_13225891	3300026328	Soil	MKSRISLFLLTLALAASSTLTAHASECSNLTIKGTYAFTIHGTVFLPNGFTLLIDGIAKE
Ga0257172_11127621	3300026482	Soil	MKFRILFFLLTLVVGGSQSLTAHASSCSNGTIKGTYAFTVHGQIFLAGGSALLIDGLAKTTFDGNGNLTQLDAIAVNGNVAPGWAA
Ga0209805_11026072	3300026542	Soil	LKFRISLFLLTLALAASLTSTAHASACSNSTIRGTYAITIRGTIFLPDGSTLLIDGLAKT
Ga0209528_10692392	3300027610	Forest Soil	MKFRISLLLLTFALAMSSTLMAHAGACSNSTIQGTYAFTIHGQVFLPDGSTLLIDGLAKTTFDGKGK
Ga0209106_10689171	3300027616	Forest Soil	MKFRVSLLLLTLALAASSTLTAHASACSNSTIQGSYAFTIHGTVFLPDGST
Ga0209217_10839971	3300027651	Forest Soil	MKFRNSPFLLALALVVSSPLMSHASVCSNSTIEGSYAFTIHG
Ga0209118_10833371	3300027674	Forest Soil	MKFRISLLLLTFALAASSTLTAHAACNNLTIKGRYAFTIHG
Ga0208989_100043915	3300027738	Forest Soil	MKFRVSLFLLTLALAASSTLTAHASACSNSTIQGSYAFTIHGTVFLPDGSTLLIDG
Ga0208989_100172743	3300027738	Forest Soil	MKSRISLLLLTLALAASSTLTAHASACSNSTIRGTYAFTIHGTVFLPDGSTLLITGL
Ga0209448_102580542	3300027783	Bog Forest Soil	MKFRISLFLMTFTLAASSTLMAHAGACSNATIQGTYAFTIHGKIFNPDGSIL
Ga0209580_104314651	3300027842	Surface Soil	MKFRISLFLFTFALVASSTATAHASACSNFTIQGTYAFTIHGQAFLPDGSTLL
Ga0209180_107758151	3300027846	Vadose Zone Soil	MKFRISLFLLALALAASSTLTAHASASSNLTIKGTYAFTIHGTVFLPGGSTLLIDGLAKPTFDGNGNIGNTSIAIP
Ga0209701_107130641	3300027862	Vadose Zone Soil	MKFRISLFLLTLALAASSTLTAHARACSNSTIQGTYAFTIHGTLFLP
Ga0209283_102839111	3300027875	Vadose Zone Soil	MKFRILFFLLTLVVVGSQSSTAHASACSNSTIRGSYAFTIHGTVFLPGGPTLLIDG
Ga0137415_100946183	3300028536	Vadose Zone Soil	MKFRILFFLLTLVVVGSQSLTAHASSCSNGTIRGSYAFTIHGQVFLPNGSTLLIDGL
Ga0137415_101093183	3300028536	Vadose Zone Soil	MKSRISLFLLTFALTASSTLTAHASACSNSTIKGTYAFTIHGQVFVPNGPTLLINGLAKTTFDGNGNL
Ga0137415_103343432	3300028536	Vadose Zone Soil	MKSRISLFLLTLTLAASSTLTAHASACSNSTIQGTYAFTIHGTVFLPDGSTLLITGLSKTTFDG
Ga0137415_111232302	3300028536	Vadose Zone Soil	MKFRTSVLLLTFALAMSSTLMAHAGACSNSTIQGTYAFTIHGQVFLQDGSTLLIDGLAKTTFDGKGNLTQLDAV
Ga0257175_10007453	3300028673	Soil	MKSRISLFLLTLALAASSTLTLTAHASACSNSTIQGIYAFTIHGTVFLPDGSTLLIDGIA
Ga0307312_100502982	3300028828	Soil	LKFRISLFLLTLALAASLTSTAHASACSNSTIRGTYAITILGTIFLPDGSIF
Ga0170834_1071194272	3300031057	Forest Soil	MKFRISLLLLTFALAASSTLTTHASACSNSTIQGSYAFTIHGTVFLPDGSTLLIDGIAKQTFD
Ga0170834_1133019332	3300031057	Forest Soil	VKFRISLFLLTVALAASSTLTAHASACSNSTIHGTYAFTIHGQVFLPDGSTLLIAGL
Ga0170824_1125452731	3300031231	Forest Soil	MKSYSPFLLAIALIVSSPLTSHASACSNSTIRGSYAYTIHGQVF
Ga0265325_102930141	3300031241	Rhizosphere	MKSRISLLLLTFALAASSTLMAHAGACSNSTIQGTYAFTIHG
Ga0318572_102350461	3300031681	Soil	MRSRISALLLSLALVGLSTVAAQASSCSNLTIRGSYAFTI
Ga0307469_100734121	3300031720	Hardwood Forest Soil	MKFCKFPFLLAVALIAASPSMSHASACSNSTIRGSYAFTIHGTLFVPGGPPLVVNGIDR
Ga0307469_102748793	3300031720	Hardwood Forest Soil	MKFRISLLLLTFALATSSTLMAHASACSNSTIQGTYAFTIHGQVFLPDGSTLLIDGLAKTTFDGNGN
Ga0307469_113539392	3300031720	Hardwood Forest Soil	MKFHNSPFLLTLALIVSSPLMSHASACSNSTIRGSYAFTIHGTIFLPNGSTLLIDGIAKQTFDGNG
Ga0307469_120992092	3300031720	Hardwood Forest Soil	MKSRISLLLITLALAGSSTVTAHASSCSDSTIIGTYAFTLHGTIFLPNGSTLLIDGIAKQTYDGQGNM
Ga0307469_122411461	3300031720	Hardwood Forest Soil	MKFRISLLLLSLALAVSSTLTAHASACSNSTIKDTYAFTIHGQVFLPDGSSLIIDGLAKTTFDGQGNLT
Ga0307468_1004941522	3300031740	Hardwood Forest Soil	MKFHNSPFLLTLALIVSSPLMSHASACSNSTIRGSYAFAIH
Ga0307468_1010585291	3300031740	Hardwood Forest Soil	MKFRISLFLLALALAASSTLTAHASACSNSTIQDTYAFTIHGQIFVPDGSIL
Ga0318535_104047722	3300031764	Soil	MNIHTAVRLLVLALATSSVLTAHASVCSNKTIQGTYAFTIHGTILVPDGSSLLVNGLARTTF
Ga0307473_109983581	3300031820	Hardwood Forest Soil	MKFRISLVLLTIALASSAVTARASCTNSTIKGTYAFTIHGTVFLPGGAPPLLV
Ga0318531_104796172	3300031981	Soil	MRSRISALLLSLALVGLSTVAAQASSCSNLTIRGSYAFTIHGTIFLPDGSTLLVDGIDKATYD
Ga0307471_1017587772	3300032180	Hardwood Forest Soil	MKFRTPLFLLTLALAASSSLAAHAGACSNMTIKGTYASTIHATIFLPDGSTLLLDGLAKQTFDGDGHFTQVDAV
Ga0307472_1014418301	3300032205	Hardwood Forest Soil	MKSRISLFLLTLALAASSTLTTHASACSNSTIQGSYAFTIHGIVFLPGGSTLLIDGIAK
Ga0307472_1019769521	3300032205	Hardwood Forest Soil	MKFRISLVLLTIALASSAVTARASCTNSTIKGTYAFTIHGTVFLPGGAQPLLVDGLAKTTFDGNG
Ga0307472_1021161241	3300032205	Hardwood Forest Soil	LKSRISLSLLTVALAASSTLTAHASACGNWTIQGTYAATIHGQIFLPDGSTLLIDGIAKTTYDGKGNLTQVDAVADNG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F043049

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences