Metagenome / Metatranscriptome Family F043102

Basic Information
Family ID	F043102
Family Type	Metagenome / Metatranscriptome
Number of Sequences	157
Average Sequence Length	51 residues
Representative Sequence	MLTPFLTHGWASSPERLAIAAAVTLGFAVLARVLRGVNRSGALAGGLAC
Number of Associated Samples	128
Number of Associated Scaffolds	157

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	44.59 %
% of genes near scaffold ends (potentially truncated)	47.13 %
% of genes from short scaffolds (< 2000 bps)	42.04 %
Associated GOLD sequencing projects	122
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Most Common Taxonomy
Group	Unclassified (64.331 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (19.108 % of family members)
Environment Ontology (ENVO)	Unclassified (50.318 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (41.401 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.05% β-sheet: 0.00% Coil/Unstructured: 51.95%
Feature Viewer

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Pfam ID	Name	% Frequency in 157 Family Scaffolds
PF02735	Ku	52.23
PF13690	CheX	3.18
PF01850	PIN	1.91
PF02321	OEP	0.64
PF03705	CheR_N	0.64

COG ID	Name	Functional Category	% Frequency in 157 Family Scaffolds
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	52.23
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	1.27
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.27

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.33 %
All Organisms	root	All Organisms	35.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.33 %
cellular organisms	root	All Organisms → cellular organisms	35.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.33 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.33 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	34.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.33 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	17.20 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.20 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.20 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.20 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.20 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.27 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10013010	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6483	Open in IMG/M
3300002245\|JGIcombinedJ26739_100230612	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1742	Open in IMG/M
3300002907\|JGI25613J43889_10074110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	918	Open in IMG/M
3300004080\|Ga0062385_10430512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300005176\|Ga0066679_10196255	All Organisms → cellular organisms → Bacteria → Acidobacteria	1284	Open in IMG/M
3300005445\|Ga0070708_100510839	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1133	Open in IMG/M
3300006059\|Ga0075017_100833450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300006162\|Ga0075030_100387713	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300006162\|Ga0075030_100639796	All Organisms → cellular organisms → Bacteria → Acidobacteria	843	Open in IMG/M
3300006162\|Ga0075030_101363668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300006175\|Ga0070712_100084057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2313	Open in IMG/M
3300007788\|Ga0099795_10072456	All Organisms → cellular organisms → Bacteria → Acidobacteria	1302	Open in IMG/M
3300009038\|Ga0099829_10425203	All Organisms → cellular organisms → Bacteria → Acidobacteria	1099	Open in IMG/M
3300009521\|Ga0116222_1556639	Not Available	503	Open in IMG/M
3300009628\|Ga0116125_1033516	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1285	Open in IMG/M
3300009641\|Ga0116120_1226929	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300009641\|Ga0116120_1228046	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300009645\|Ga0116106_1149190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300009646\|Ga0116132_1261112	Not Available	527	Open in IMG/M
3300009700\|Ga0116217_10945680	Not Available	528	Open in IMG/M
3300010379\|Ga0136449_101914745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300011269\|Ga0137392_10074582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2620	Open in IMG/M
3300012350\|Ga0137372_10472390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300012363\|Ga0137390_10408520	All Organisms → cellular organisms → Bacteria → Acidobacteria	1335	Open in IMG/M
3300012683\|Ga0137398_11029833	Not Available	570	Open in IMG/M
3300012925\|Ga0137419_10372040	All Organisms → cellular organisms → Bacteria → Acidobacteria	1110	Open in IMG/M
3300012944\|Ga0137410_10186362	All Organisms → cellular organisms → Bacteria → Acidobacteria	1600	Open in IMG/M
3300014158\|Ga0181521_10376241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300014201\|Ga0181537_10161199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1539	Open in IMG/M
3300014491\|Ga0182014_10610249	Not Available	525	Open in IMG/M
3300014638\|Ga0181536_10334781	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300016702\|Ga0181511_1401139	All Organisms → cellular organisms → Bacteria → Acidobacteria	1594	Open in IMG/M
3300017941\|Ga0187850_10336891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300017996\|Ga0187891_1085409	All Organisms → cellular organisms → Bacteria → Acidobacteria	1223	Open in IMG/M
3300018004\|Ga0187865_1216209	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300018004\|Ga0187865_1252939	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300018008\|Ga0187888_1275230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300018009\|Ga0187884_10112525	All Organisms → cellular organisms → Bacteria → Acidobacteria	1174	Open in IMG/M
3300018015\|Ga0187866_1286435	Not Available	581	Open in IMG/M
3300018017\|Ga0187872_10134252	Not Available	1200	Open in IMG/M
3300018017\|Ga0187872_10246957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300018026\|Ga0187857_10275272	Not Available	771	Open in IMG/M
3300018030\|Ga0187869_10020871	All Organisms → cellular organisms → Bacteria	3741	Open in IMG/M
3300018040\|Ga0187862_10453059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300018044\|Ga0187890_10251632	Not Available	995	Open in IMG/M
3300018046\|Ga0187851_10806002	Not Available	528	Open in IMG/M
3300018057\|Ga0187858_10510552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300018085\|Ga0187772_11181156	Not Available	563	Open in IMG/M
3300018088\|Ga0187771_10303071	All Organisms → cellular organisms → Bacteria → Acidobacteria	1339	Open in IMG/M
3300019082\|Ga0187852_1367375	Not Available	565	Open in IMG/M
3300021478\|Ga0210402_11373796	All Organisms → cellular organisms → Bacteria → Acidobacteria	633	Open in IMG/M
3300025412\|Ga0208194_1044988	Not Available	685	Open in IMG/M
3300025477\|Ga0208192_1036508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1042	Open in IMG/M
3300025506\|Ga0208937_1009462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2574	Open in IMG/M
3300025507\|Ga0208188_1100239	Not Available	653	Open in IMG/M
3300025527\|Ga0208714_1121584	Not Available	501	Open in IMG/M
3300026355\|Ga0257149_1007632	All Organisms → cellular organisms → Bacteria → Acidobacteria	1357	Open in IMG/M
3300026377\|Ga0257171_1010681	All Organisms → cellular organisms → Bacteria → Acidobacteria	1501	Open in IMG/M
3300026499\|Ga0257181_1081555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300027394\|Ga0209904_1000480	All Organisms → cellular organisms → Bacteria → Acidobacteria	3713	Open in IMG/M
3300027641\|Ga0208827_1206518	Not Available	520	Open in IMG/M
3300027643\|Ga0209076_1222470	Not Available	513	Open in IMG/M
3300027648\|Ga0209420_1037760	All Organisms → cellular organisms → Bacteria → Acidobacteria	1489	Open in IMG/M
3300027667\|Ga0209009_1037232	All Organisms → cellular organisms → Bacteria → Acidobacteria	1207	Open in IMG/M
3300027898\|Ga0209067_10321793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300027911\|Ga0209698_10434160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1023	Open in IMG/M
3300028090\|Ga0255349_1086787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300028566\|Ga0302147_10206780	Not Available	659	Open in IMG/M
3300029817\|Ga0247275_1032104	All Organisms → cellular organisms → Bacteria → Acidobacteria	1568	Open in IMG/M
3300029915\|Ga0311358_10186232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1912	Open in IMG/M
3300030506\|Ga0302194_10000413	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	27839	Open in IMG/M
3300030659\|Ga0316363_10244392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300031247\|Ga0265340_10199935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300031708\|Ga0310686_103328629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3364	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.73%
Host-Associated	Host-Associated	1.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.96%
Aquatic	Environmental → Aquatic	47.77%
Plants	Host-Associated → Plants	1.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.31%
Freshwater	Environmental → Aquatic → Freshwater	41.40%
Peat	Environmental → Terrestrial → Peat	7.64%
Sediment	Environmental → Aquatic → Sediment	6.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.27%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	41.40%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.94%
Loam	Environmental → Terrestrial → Soil → Loam	7.64%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.37%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.27%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	28.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.02%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	10.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.37%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.55%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.91%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.27%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	19.11%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.19%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	10.83%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.28%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.37%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.46%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.46%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.55%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.55%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.91%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.27%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.27%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.27%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.64%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.64%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.64%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.64%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.64%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.64%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300025477	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 (SPAdes)	Environmental	Open in IMG/M
3300025480	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)	Environmental	Open in IMG/M
3300025501	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 (SPAdes)	Environmental	Open in IMG/M
3300025506	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40 (SPAdes)	Environmental	Open in IMG/M
3300025507	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026920	Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN397 (SPAdes)	Environmental	Open in IMG/M
3300027394	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712P3D	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028090	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v15	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029988	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030506	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031250	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG	Host-Associated	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_100130109	3300001356	Peatlands Soil	MLNPFLAHGWASSTERLAIAAAVTLGFAVLARAVRGVNRSGALAGGLAGFLLF
JGI12269J14319_102744231	3300001356	Peatlands Soil	MLTPFLTHGWASSPERLAIAAAVTLGFAVLARAVRGVNRS
JGI12659J15293_100145531	3300001546	Forest Soil	MLSALLAHGWATSPKLLGIAAVVTLGFALLARALRGVSRSGA
JGIcombinedJ26739_1002306123	3300002245	Forest Soil	MLSALLAHGWATSPKLLGIAAVVTLGFALLARALRGV
JGI25613J43889_100741101	3300002907	Grasslands Soil	MLTSFPGHGWASSPERLAIAAAVTLGFALLARALRGVNRSGAVAGGLACFLLFAGAGPAA
Ga0062385_102747291	3300004080	Bog Forest Soil	MLHSFLPYGWATTPAHLAIAAGLTIAFTVLARALRGVSLPGALAGG
Ga0062385_104305121	3300004080	Bog Forest Soil	MQIPFLAHAWAFSPERLVIAVAVTLAFAVLARTLRGVNPSGALAGGLACF
Ga0062385_112395081	3300004080	Bog Forest Soil	MLTPFLTYGWASSPERLAIAAGVTLGFAGVARAVRGVTRSGALA
Ga0062389_1046654011	3300004092	Bog Forest Soil	MLTPYLTYSWASSPERLAIAAAVTVGFAVLARILRGVNLSGALAGGLSCF
Ga0062386_1014802752	3300004152	Bog Forest Soil	MMLNPYLAHAWASSPERLAIAAAVTLGFAVLARVLRGVNRSGALAGGLACF
Ga0066679_101962551	3300005176	Soil	MLTSFLGQGWASSPERLAIAAAVTLSFAVLARALRGVNRSGGLAGGLVCFLLFAGAGPAAFGTL
Ga0070708_1005108392	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPNSFLAYAWASNLERLAIAVAVTLGFALLARVLRGVNFSGMLAGGCACFLLYASAGPAAFASLTALFALTWAATRLGFRRKQELGLAERG
Ga0066692_100320331	3300005555	Soil	MLTSLPGHGWASSPERLAIAVAVTLGFAVLARALRGVDRSGAVAGGLAC
Ga0075017_1003738902	3300006059	Watersheds	MLNPFLAHGWASSPERLAIAAAVTLGFAVLARAARGVDRTGAPAGG
Ga0075017_1004818441	3300006059	Watersheds	MLNSFLTHGWASSPERLALAMAVTVGFAVLARALRGVNLSGALA
Ga0075017_1005184251	3300006059	Watersheds	MQNLLAHGWAWSPLRWAAAAAITLIFAVMARVLRGVNLSGA
Ga0075017_1008334502	3300006059	Watersheds	MLIPFLTNAWASSPERLAIAAGVTLGFAVLARVLRGVNHSGALAGGLACFLLF
Ga0075030_1003877132	3300006162	Watersheds	MPNVLMHGWALSPQRWAAAAAVTVGFALVARRLRGVNRSGAPAGGLACFLLFAMAGPGAFAAL
Ga0075030_1006397961	3300006162	Watersheds	MLTSFLAHGWASSPERWAIAAAVTIGFAVLAHALRGVNHSGALAGAAACFLLFTGGGPWAFATLSALFAMAW
Ga0075030_1013636681	3300006162	Watersheds	MLNLLEHGWAWTPQRWAVVAAITLSFALVARVLRGVNRSGALAGGLACFLLFAAAGPG
Ga0070715_105928851	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MLTSFLPSCWANTPERWALVGTVTLAFALLARALHGVNRSGAIA
Ga0075014_1001191331	3300006174	Watersheds	MVNFFLIHAWASSPERLAIAAAVTLGFAVLARALRAVTRSGALAGGM
Ga0070712_1000840571	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLTSFLPSGWANTPERWALVGTVTVAFALLARALHGVNRSGAIAGGLACFLLFAGSG
Ga0075521_101224421	3300006642	Arctic Peat Soil	MLTPFLAHAWASSPERLAVAAPVTLGFAVLARALRGVNRSGA
Ga0099795_100724562	3300007788	Vadose Zone Soil	MLKLFLAYGWASSPERLAVAGAVTIGFSMLARALRGVDRSGMFAGGAACLLLFVGAGPAAFAILAALFLLTWI
Ga0099829_104252031	3300009038	Vadose Zone Soil	MLTSFLGHGWASSPQRLAIAAAVTLGFAVLAHALRGVNRSGAMAGGLACFLLF
Ga0116108_10098664	3300009519	Peatland	MMLNPYLAHAWASSPERFAIAAAVTLGFAVLARVLRGVN
Ga0116222_15566391	3300009521	Peatlands Soil	MLNSYLAHSWASSPERLAIAAVVTLGFAVLARALRGVNRSGALAGGIACFLL
Ga0116221_15525531	3300009523	Peatlands Soil	MLTLFPAYAWASSPERLAIAAAVTLGFAVLARTLRGVNRSGAIAGGLACFL
Ga0116125_10335163	3300009628	Peatland	MLTPFLTHAWASSPHRLAIAVAVTLGFALLARALRGVNRSGALAGGFACFLLFAGIGPAAFGTLAALFVMTWAS
Ga0116102_11044401	3300009632	Peatland	LLASTIMNPFLAHGWASSPEQLAIVAAVTLGFAVLAR
Ga0116102_11469172	3300009632	Peatland	MMLNPYLAHAWASSPEQLAIAAAVTLAFAVLAKTLRGV
Ga0116120_10615322	3300009641	Peatland	MLTPLLIHAWASSPQRLAIAVGVTLGFAVLARALRGV
Ga0116120_12269291	3300009641	Peatland	MLNSFLAHGWASSPERLAIAAGVTLGFAVLARALRGVNQPGALAGGLACFLLFAGAGPVAFAA
Ga0116120_12280462	3300009641	Peatland	MNPFLAHGWASSPERLAIAATVTLGFAVLARAVRGVNRAGALAGGLACLLLFAGAGP
Ga0116106_11491902	3300009645	Peatland	MFNPFLAHGWASSPERLAIAAAVTLGFAVLARTVRGVNRSGALAGGLACFVLFAGI
Ga0116132_10753712	3300009646	Peatland	MLNSFLAHGWASSPERLAIAAAVTLGFAVLARAVRGV
Ga0116132_12611121	3300009646	Peatland	MLNPFLAHGWASSPERLAIAAAVTLGFAVLARAVRGVNRSGALAGGLACFVLFAGIGPTAFVALAILFVMTWVSTRL
Ga0116217_109456801	3300009700	Peatlands Soil	MLNPFLAHGWASSPERLAIAATVTLGFAVLARAVRGVNRSGALAGALACFLLFAGAGP
Ga0116130_11153573	3300009762	Peatland	MLAPYLAHGWASSPERLAIAAAVTLGFAVLARALCGVNRSGALAGGLACFL
Ga0116219_102574191	3300009824	Peatlands Soil	MLNPFLAHGWASSPERLAIAATVTLGFAVLARAVRG
Ga0116223_108084641	3300009839	Peatlands Soil	MLTPFLAQGWASSPERLAIAAAVTLGFAALARALRGVNRSG
Ga0136449_1004802831	3300010379	Peatlands Soil	MPNPLLAHGWASSPERLAIAAGVTLGFAVLARALRGVN
Ga0136449_1019147452	3300010379	Peatlands Soil	MFNPFLAHGWASSPERLAIAAAVTLGLAVLARAVRGVNRSGALAGGLAGFLLFAGAGPTA
Ga0137392_100745821	3300011269	Vadose Zone Soil	MLTSFLGHGWASSPERLAVAAAVTLGFGVLACALRGVNRSGALAGGLACFLLFANAGPTAFATLAVLFLMTWVATR
Ga0137389_112339052	3300012096	Vadose Zone Soil	MLNPYLAHGWASSAERLAIAAAVTLGFAVLARALR
Ga0137362_111998772	3300012205	Vadose Zone Soil	MLYPYLAHGWASSLERLAIAAAVTLGFAVLARALRGVDRSGAWAG
Ga0137362_117665311	3300012205	Vadose Zone Soil	MLNSFLTYGWASSPGRLAIAGAVTVGFALLARALRGVDQS
Ga0137379_117899131	3300012209	Vadose Zone Soil	MPNPFLAYAWASNLQRLAIAGAVTLGFAVLARVLRGVNRSGMLAGGCACF
Ga0137387_102532483	3300012349	Vadose Zone Soil	MIGRMLNPFLAQGWASSPARLAIAAAVTLAFAVLSRALRGVNRSGA
Ga0137372_104723902	3300012350	Vadose Zone Soil	MLNFVLTYAWASNPGRLAIAGAVTLGFAPLARGLRGVSRPGMLAGGCACFLLFAGAGPAAFAALAAL
Ga0137390_104085201	3300012363	Vadose Zone Soil	MLNPYLAHGWASSAERLAIAAAVTLGFAVLARTLRGVNRSGALAGGLACFLLFAGGGPAA
Ga0137390_110025381	3300012363	Vadose Zone Soil	MMLTSIPGHVWASSPERMAIAAAVTLAFAVLARALHGVNRS
Ga0137398_110298331	3300012683	Vadose Zone Soil	MLTSLPGHGWASSPERLAIAVAVTLGFAVLARALRGVDRSGAVAGGLACFLLFAGA
Ga0137397_108226271	3300012685	Vadose Zone Soil	MLKLFLAYGWASSPERLVVAGAVTIGFALLARALRGVDRS
Ga0137419_103720401	3300012925	Vadose Zone Soil	MLTSFLGHSWASSPERLAIAAAVTLGFAVLARALRGVNRSGALAGGLACFLLFAGA
Ga0137410_101863621	3300012944	Vadose Zone Soil	MLKMVMAYGWATSPERLAIAAAVTVCFALLARVVRGVDRSGMVAGDAACFLLFAGAGPSA
Ga0181521_101901392	3300014158	Bog	MLNPFLAHGWALSPERVAIAAAVTLGFAVLARAVRGVNR
Ga0181521_103762411	3300014158	Bog	MLTPFPGHYWASSSERLAIAAAVTLGFAVLARALRGVNPSGALA
Ga0181538_105926701	3300014162	Bog	MLTPFPGHYWASSPERLAIAAAVTLGFAVLARALRGVN
Ga0181523_102055612	3300014165	Bog	MLNSFLAHGWASSPERLAIAAGVTLGFAVLARALRGVNQPGA
Ga0181537_101611991	3300014201	Bog	MLTPFLPHAWASSPERLALAAGVTLGFALLARSLRGVNPSGAMAGGLACFLLFADAGPPAFATLAALFLMTWVSTR
Ga0181537_110029221	3300014201	Bog	MSIPFLPFAWASTPERLAVAAAVTLGFAQLGRAVRGVSSSGAWAG
Ga0182014_106102492	3300014491	Bog	MLPPFLAHGWASSPERLAIAAAVTLSFAVLARALRGVNRSGALAGGLACFLLFAGAG
Ga0182019_113069292	3300014498	Fen	MLTPYLAHGWASSPERLAIAAAVTLGFAVLARALRGVNRSG
Ga0181536_103347811	3300014638	Bog	MMLNPYLAHAWASSPERLAIAAAVTLGFAVLARVLRGVNRSGALAGGLACFLLFAGFGPSAFATLAALFLMTWVSTRL
Ga0167668_10219932	3300015193	Glacier Forefield Soil	MTPFLEHGWASTTQRLAVASAVTLGFTVLARALRAVSLSGALAGGLCCF
Ga0181511_14011392	3300016702	Peatland	MLSPLLAHAWASSPERLAIAAAVTLGFALLARVLRGVNGSGALAGGLACFLLFAGAGP
Ga0181505_108611622	3300016750	Peatland	LLASTIMNPFLAHGWASSPEQLAIVAAVTLGFAVLARVLRGVNRSGAPAGGIA
Ga0181505_109478101	3300016750	Peatland	MLNSFPAHAWASSPSRLAIAAAVTLGFAVLARTLR
Ga0187818_101171441	3300017823	Freshwater Sediment	MPNPFLAHGWASSPERLAIAAGVTLAFAVLARALRGVNRPGALAGGLA
Ga0187801_100673261	3300017933	Freshwater Sediment	MLTTLFTHAWAATPERLAVAAAVTVGFALLARALRGVTAGG
Ga0187850_103368911	3300017941	Peatland	MNPFLAHGWASSPEQLAIVAAVTLGFAVLARVLRGVNRSGAPAGGIACFILFGGAGP
Ga0187819_105659021	3300017943	Freshwater Sediment	MLTTLFTHAWAATPERLAVAAAVTVGFALLARALR
Ga0187879_108039152	3300017946	Peatland	MLNPFLAHGWASSPERLAIAAAVTLGFAVLARAVRGV
Ga0187891_10854091	3300017996	Peatland	MMLNPYLAHAWASSPERLAIAAAVTLGFAVLARVLRGVNRSGALAGGLACFLLFAGFGPSAFATLAALFLMTW
Ga0187865_12162091	3300018004	Peatland	MLNPYLAHAWASSPERLASAAAVTLGFAVLARALRGVNRSGAPAGGLACFLLFAGA
Ga0187865_12529391	3300018004	Peatland	MNPFLAHGWASSPERLAIAATVTLGFAVLARAVRGVNRAGALAGGLACLLLFAGAG
Ga0187805_104991001	3300018007	Freshwater Sediment	MLNSFLIHAWASSPERLAVAAAVTVGFAVLARVLRGVTGAGA
Ga0187888_11338912	3300018008	Peatland	MNPFLAHGWASSPERLAIAATVTLGFAVLARAVRGVNRAGALAGGL
Ga0187888_12752302	3300018008	Peatland	MMLNPYLAHAWASSPEQLAIAAAVTLAFAVLAKTLRGVNRSGALAGGLACFLLFAGFGPSAFATLA
Ga0187884_101125252	3300018009	Peatland	MLNSFLAHGWASSPERLAIAAGVTLGFAVLARALRGVNQPGALAGGLACFLLFA
Ga0187860_12094181	3300018014	Peatland	MLTPFLTHGWASSPERLAIAAAVTLGFAVLARVLRGVNRSGALAGGLAC
Ga0187866_12864351	3300018015	Peatland	MLTPFPGHYWASSPERLAIAAAVTLGFAVLARALRGVNPSGALAGGLACFLLFAGAGPTAFAT
Ga0187872_101342521	3300018017	Peatland	MLTPFLTHGWASSPERLAIAAAVTLGFAVLACLLRGVNRSGALAGDLACFVLF
Ga0187872_102393741	3300018017	Peatland	MLTPFPGHYWASSPERLAIAAAVTLGFAVLARALRGVNPSGALAGG
Ga0187872_102469571	3300018017	Peatland	MLTPFPGHYWASSSERLAIAAAVTLGFAVLARALRGVNPSGALAGGLACFLLFA
Ga0187881_104068262	3300018024	Peatland	MLNSFLAHGWASSPERLAIAAGVTLGFAVLARALRGVNQPGALAGGL
Ga0187857_102752722	3300018026	Peatland	MLTPFLTHAWASSPHRLAIAVAVTLGFALLARALRGVNRSGALAGGFACFLLFAGIGPAAFGTLAALFVMTCAS
Ga0187869_100208714	3300018030	Peatland	MNPFLAHGWASSPEQLAIVAAVTLGFAVLARVLRGVNRSGAPAGGIACFILFG
Ga0187867_106326411	3300018033	Peatland	MLNLFVAHGWASSPERLAIAAAVTLGFAVLARAVRGVNRSGALAG
Ga0187883_100931801	3300018037	Peatland	MLTPFLTHAWASSPQRLAIAAGVTLGFAVLARALRGVNRSGALAGGLAC
Ga0187855_100014341	3300018038	Peatland	MLAPFLTHAWASSPERLTIAAAVTLGFALVARAVRGVNGSGSLAGGLA
Ga0187862_104530592	3300018040	Peatland	MLNSFLAHGWASSPERLAIAAAVTLGFAVLARAVRGVNRSGALAGGLAGFLLFAGAG
Ga0187890_102516321	3300018044	Peatland	MLTPFLTHGWASSPERLAIAAAVTLGFAVLACLLRGVNRSGALAGDLACFVLFAGAGPAA
Ga0187851_108060021	3300018046	Peatland	MLAPFLTHAWASSPERLTIAAAVTLGFALVARAVRGVNGSGSLAGGLACFLL
Ga0187859_103358741	3300018047	Peatland	MLTPLLIHAWASSPQRLAIAVGVTLGFAVLARALRGVSRSGALAGGIACFL
Ga0187859_103453131	3300018047	Peatland	MLNSFLAHGWASSPERLEIAAAVTLGFTVLARTLRGVT
Ga0187858_105105521	3300018057	Peatland	MLTPFLTHGWSSSPERLASAAAVTLGFAVLARAVRGVNRSGALPGSLACFALFAG
Ga0187772_111811561	3300018085	Tropical Peatland	MTLFPHSWASTPERFVIAAAVTLAFALVARAVRGVDWSGAVAGGLACFALFAGIGPAA
Ga0187771_103030712	3300018088	Tropical Peatland	GWASSPERLAIVAAVTLGFALLARAVRGVNPSGALAGGLACFLLFASAGKKQETGEPARQSSR
Ga0187771_106235802	3300018088	Tropical Peatland	MAHAWASGLARLATAATVTVAFALLARAVRGVNWSGALAGGLACFA
Ga0187771_113208951	3300018088	Tropical Peatland	MLTTFFAHGWAASADRLAVAATVTVAFALLARAVRGVNWSGALAGGLACFALFVG
Ga0187852_11035111	3300019082	Peatland	MLTPYPAHAWASSPERLAIAAAVTLSFAVLAHALRG
Ga0187852_13673751	3300019082	Peatland	MLNPFLAHGWASSPERLAIAAAVTLGFAVLARAVRGVNRSGALAGGFACFVLFVGIGPTAFVALA
Ga0210389_106323462	3300021404	Soil	MLNPYLAHGWASTPERLAIAATVTLGFAVAARFLRGVNRSGALAGAIA
Ga0210402_113737961	3300021478	Soil	MLKMVLAYGWASSSERLAIAGAVTLCFALLARVVRGVDRSCMFAGGAACFLLFAGAGPSAFATLVALFLLTWISTRFGYRHK
Ga0224557_10479001	3300023101	Soil	MLPPFLAHAWASSPERLAIAAAVTLSFAVLARALRGVNR
Ga0208194_10449881	3300025412	Peatland	MLTPFLTHGWASSPERLAIAAAVTLGFAVLACLLRGVNRSGALAGDLACFVLFAGAGPAAFV
Ga0208192_10365082	3300025477	Peatland	MLTPFPGHYWASSSERLAIAAAVTLGFAVLARALRGVNPSGALAGGLACFLLFAGAGPT
Ga0208688_10528952	3300025480	Peatland	MMLNPYLAHAWASSPEQLAIAAAVTLAFAVLAKTLRGVN
Ga0208563_100187012	3300025501	Peatland	MLNPYLAHAWASSPERLASAAAVTLGFAVLARALRGVNRSGAPAG
Ga0208937_10094621	3300025506	Peatland	MLNSFLAHGWASSPERLAIAAAVTLGFAVLARAVRGVNRSGALAGGLAGFLLFAGAGKKQ
Ga0208188_11002391	3300025507	Peatland	MLTPFPGHYWASSPERLAIAAAVTLGFAVLARALRGVNPSGALAGGLACFLLFASVGPTAFAA
Ga0208714_11215841	3300025527	Arctic Peat Soil	MLNPCLHAWASSPERLAIAAAVTLGFAVLARALRGVNRSGALAGGLACFLLFADT
Ga0208355_11238671	3300025581	Arctic Peat Soil	MLTPLLAHAWASSPERLAIAAGVTLGFAVLARALRG
Ga0209055_12447021	3300026309	Soil	MLTSFLGQGWASSPERLAIAAAVTLSFAVLARALRGVNRSG
Ga0257149_10076322	3300026355	Soil	MLTSFVGHGWASSPERLAIAATVTLAFAVLARALHGVNRSGALAGGFACFLLFA
Ga0257171_10106812	3300026377	Soil	MLNSLLTYGWASSPGRLAIAGVVTLGFALLARALRGVDRSGMLAGGASCFLLFAGSGPSAFGV
Ga0257159_10831031	3300026494	Soil	MLTSFVGHGWASSPERLAIAATVTLAFAVLARALHGVNRSGAL
Ga0257181_10815551	3300026499	Soil	MLNLLLTYGWASSPGRLAIAGAVTLGFALLARVLRGVDRSGMFAGGAACFLLFAGAG
Ga0257168_10374411	3300026514	Soil	MLTSFVGHGWASSPERLAIAATVTLAFAVLARALHGVNRSG
Ga0208575_10060831	3300026920	Soil	MLTSFVGHGWASSPERLAIAATVTLAFAVLAHALHGVNRSGA
Ga0209904_10004801	3300027394	Thawing Permafrost	MLNPLLAHAWASSPERLAIAAGVTLGFAVLARVLRGVNRSGALAGGLACFLLFAGAGPAAFATLTALFLMTWVSTRL
Ga0209332_10327281	3300027439	Forest Soil	MLTSIPGHIPGHAWASSPERLAIAAAVTLGFAVLARALRGVNRSGAVA
Ga0209220_10340422	3300027587	Forest Soil	MLTSFIGHGWASSPGRLAIAAAVTLGFAVVARALR
Ga0208827_10856532	3300027641	Peatlands Soil	MLNPFLAHGWASSPERLAIAATVTLGFAVLARAVR
Ga0208827_12065181	3300027641	Peatlands Soil	MLTLFPAYAWASSPERLAIAAAVTLGFAVLARTLRGVNRSGAIAGGLACFLLF
Ga0209076_12224701	3300027643	Vadose Zone Soil	MLTSFLGHGWASSPERLAIAAAVTLGFAMLARAMRGVNRSGGLAGGLACFLLFAGAGPRAFATLAALFLMTWVATRLG
Ga0209420_10377601	3300027648	Forest Soil	MLNSYLVHAWASTPERLTIAAAVTLAFAVVAQFLRGVNPSGAFAGGIACFLLFVGAGPAAFVALCVLFLL
Ga0209009_10372321	3300027667	Forest Soil	MLTSFVGHGWASSPERLAIAATVTLAFAVLARALHGVNRSGALSGGFACFLLFASAG
Ga0208989_103072851	3300027738	Forest Soil	MLTSFLGHGWASSPERLAIAVAVTLGFAVLARALRGVNRS
Ga0209040_105213411	3300027824	Bog Forest Soil	MLTPFQTHAWASSPEWLAIAAGVTLGFALLARALRGVNRSGALAGGL
Ga0209040_105293991	3300027824	Bog Forest Soil	MLNSYIAHAWASSPARLAIAAAVTLGFAGLACALRGVNRSG
Ga0209275_101131661	3300027884	Soil	MLNSSLAHAWASSPARLAIAVAVTLTFAVLARALRGV
Ga0209067_103217931	3300027898	Watersheds	MLNLYLTHAWANSPLRWTTAAGVTLAFALLARALRGVSNSGAAAGGVACFVLFVAAGP
Ga0209698_104341602	3300027911	Watersheds	MVNFFLIHAWASSPERLAIAATVTLGFAVLARVLRGVNRSGALAGGAACFLLFAGAGPAA
Ga0255349_10867872	3300028090	Soil	MLNPFLAHAWATSPERIAIAAALTLGFAALARALHGVNRSGTVAGGLSCFLLFAGA
Ga0302147_102067801	3300028566	Bog	MLTSFLSHAWASSPERLAIAAGVTLGFAVLARVLRGVNGSGAVAGGFSCFLLFAGAG
Ga0302266_100915081	3300028779	Bog	MLTSFLSHAWASSPERLAIAAGVTLGFAVLARVLRGVNGSGAVAGGF
Ga0247275_10321041	3300029817	Soil	MLNPYLAHAWASSPERLASAAAVTLGFAVLARALRGVN
Ga0247275_10549951	3300029817	Soil	MLTPFLTHAWASSPQRLALAVGVTLSFAVLARAVRGVNRSGALAGGLAGFL
Ga0311358_101862321	3300029915	Bog	MNPWPAHFWASSPERLAIAAAVTLGFSAFARVLRGVSPSGALAGGLACFLLF
Ga0302190_101127742	3300029988	Bog	MLNPFLAHAWATSPERIAIAAALTLGFAALARALHGVNRS
Ga0311370_107456821	3300030503	Palsa	MPNPFLAHGWASSPERLCIAVLVTLGFAALACALRGVNRSGALGGGI
Ga0302194_100004131	3300030506	Bog	MLAPFLTHAWASSPERLTIAAAVTLGFAALARALHGVNRSGTVAGGLSCFLLFAGAGPA
Ga0311357_115190812	3300030524	Palsa	VRAFLAMLNPFLFQGWASSTARLAIAAGVTLAFALLARAVRGVNPSGAVAGAL
Ga0316363_102443922	3300030659	Peatlands Soil	MLTLFPAYAWASSPERLAIAAAVTLGFAVLARTLRGVNRSGAIAGGLACFLLFAGSGPTAFFMLAALFV
Ga0310038_102721652	3300030707	Peatlands Soil	MLTPFLTHAWASSPERLAIAAGVTLGFALLARALRGVNRSG
Ga0302180_102922771	3300031028	Palsa	MPNPFLAHGWASSPERLCIAVLVTLGFAALACALRGVNRSGALGGGIACF
Ga0265340_101999351	3300031247	Rhizosphere	MPTSFLAHGWASTPERLAIAAGVTVGFALLAWVLRGVNRSGALAGGLACLLLFTGGGPAAFGTLAALFA
Ga0265331_103469701	3300031250	Rhizosphere	MLISHIARAWASSPERLAVAVAVTLGFAVLAHALRGVNRSGALAG
Ga0302320_119529081	3300031524	Bog	MLTPFLSHAWASSPERLAIAAGVTLGFAVLARVLRGVNGSGAVAGGF
Ga0310686_1033286293	3300031708	Soil	MMLNPYVVDGWVSTPERLVIAATVTVAFAVLARFLRGVNRSGAFAGGIACFLLFAGAGPTAFAALCVLFLMTWAA
Ga0335082_114138851	3300032782	Soil	MLNEVVVFGWASSVERWAIAAAVTIAFALLARALRGVDQS
Ga0335077_115742371	3300033158	Soil	MLTLFPHAWASSIDRFALAAVVTMAFALLARAVRGVDRSGSVAGGLA
Ga0326726_116306771	3300033433	Peat Soil	MWNLLAHGWALSPQRWAVAAAITLSFAVGARVLRGVNRSG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F043102

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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