NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F043315

Metagenome / Metatranscriptome Family F043315

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F043315
Family Type Metagenome / Metatranscriptome
Number of Sequences 156
Average Sequence Length 42 residues
Representative Sequence LPNKRLKLPGPAFKGTVRLCASELVPQGGALAPAGARPAA
Number of Associated Samples 103
Number of Associated Scaffolds 156

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 43.92 %
% of genes near scaffold ends (potentially truncated) 66.67 %
% of genes from short scaffolds (< 2000 bps) 71.15 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.14

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (61.538 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(35.897 % of family members)
Environment Ontology (ENVO) Unclassified
(66.667 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(70.513 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.14
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 156 Family Scaffolds
PF14534DUF4440 3.21
PF07883Cupin_2 2.56
PF09932DUF2164 1.92
PF12681Glyoxalase_2 1.92
PF07927HicA_toxin 1.92
PF13474SnoaL_3 1.28
PF00903Glyoxalase 1.28
PF03544TonB_C 1.28
PF05163DinB 1.28
PF09413DUF2007 1.28
PF04893Yip1 1.28
PF01872RibD_C 1.28
PF07311Dodecin 1.28
PF13540RCC1_2 1.28
PF04365BrnT_toxin 0.64
PF04993TfoX_N 0.64
PF12158DUF3592 0.64
PF12680SnoaL_2 0.64
PF00127Copper-bind 0.64
PF13602ADH_zinc_N_2 0.64
PF13826DUF4188 0.64
PF07045DUF1330 0.64
PF11528DUF3224 0.64
PF04191PEMT 0.64
PF13643DUF4145 0.64
PF14137DUF4304 0.64
PF00005ABC_tran 0.64
PF14106DUF4279 0.64
PF14485DUF4431 0.64
PF00144Beta-lactamase 0.64
PF06348DUF1059 0.64
PF01965DJ-1_PfpI 0.64
PF08592Anthrone_oxy 0.64
PF13936HTH_38 0.64
PF13683rve_3 0.64
PF02861Clp_N 0.64
PF13184KH_5 0.64
PF00717Peptidase_S24 0.64

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 156 Family Scaffolds
COG1724Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase familyGeneral function prediction only [R] 1.92
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 1.28
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 1.28
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 1.28
COG2318Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)Secondary metabolites biosynthesis, transport and catabolism [Q] 1.28
COG3360Flavin-binding protein dodecinGeneral function prediction only [R] 1.28
COG0542ATP-dependent Clp protease, ATP-binding subunit ClpAPosttranslational modification, protein turnover, chaperones [O] 0.64
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.64
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.64
COG2367Beta-lactamase class ADefense mechanisms [V] 0.64
COG2929Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin systemDefense mechanisms [V] 0.64
COG3070Transcriptional regulator of competence genes, TfoX/Sxy familyTranscription [K] 0.64
COG5470Uncharacterized conserved protein, DUF1330 familyFunction unknown [S] 0.64

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms61.54 %
UnclassifiedrootN/A38.46 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002557|JGI25381J37097_1074299Not Available554Open in IMG/M
3300002561|JGI25384J37096_10048542Not Available1619Open in IMG/M
3300002562|JGI25382J37095_10028463All Organisms → cellular organisms → Bacteria2187Open in IMG/M
3300002562|JGI25382J37095_10067926All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1334Open in IMG/M
3300002562|JGI25382J37095_10154180Not Available745Open in IMG/M
3300002908|JGI25382J43887_10073158All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1850Open in IMG/M
3300002908|JGI25382J43887_10405044Not Available576Open in IMG/M
3300005171|Ga0066677_10009311All Organisms → cellular organisms → Bacteria → Proteobacteria4190Open in IMG/M
3300005174|Ga0066680_10025099All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3310Open in IMG/M
3300005175|Ga0066673_10795656Not Available541Open in IMG/M
3300005176|Ga0066679_10484433Not Available808Open in IMG/M
3300005178|Ga0066688_10621852All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp. B05693Open in IMG/M
3300005178|Ga0066688_11018658Not Available504Open in IMG/M
3300005179|Ga0066684_11009970All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300005187|Ga0066675_10021306All Organisms → cellular organisms → Bacteria3662Open in IMG/M
3300005187|Ga0066675_10074096All Organisms → cellular organisms → Bacteria → Proteobacteria2175Open in IMG/M
3300005187|Ga0066675_10967641All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300005446|Ga0066686_10644788Not Available719Open in IMG/M
3300005468|Ga0070707_100169972All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWB2_55_192124Open in IMG/M
3300005518|Ga0070699_100731578Not Available904Open in IMG/M
3300005529|Ga0070741_10008894All Organisms → cellular organisms → Bacteria19865Open in IMG/M
3300005552|Ga0066701_10411085Not Available838Open in IMG/M
3300005553|Ga0066695_10514135All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300005553|Ga0066695_10625693All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria642Open in IMG/M
3300005556|Ga0066707_10656117All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium663Open in IMG/M
3300005557|Ga0066704_10203714Not Available1338Open in IMG/M
3300005557|Ga0066704_11038742All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium505Open in IMG/M
3300005558|Ga0066698_10360996All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1003Open in IMG/M
3300005561|Ga0066699_10242774Not Available1268Open in IMG/M
3300005561|Ga0066699_10699378All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300005566|Ga0066693_10061251All Organisms → cellular organisms → Bacteria1282Open in IMG/M
3300005569|Ga0066705_10582422All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300005569|Ga0066705_10600185All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes675Open in IMG/M
3300005569|Ga0066705_10653359Not Available639Open in IMG/M
3300005574|Ga0066694_10471495Not Available586Open in IMG/M
3300005575|Ga0066702_10845454Not Available545Open in IMG/M
3300005576|Ga0066708_10079039All Organisms → cellular organisms → Bacteria1912Open in IMG/M
3300005587|Ga0066654_10444571All Organisms → cellular organisms → Bacteria → FCB group708Open in IMG/M
3300006031|Ga0066651_10006582All Organisms → cellular organisms → Bacteria4545Open in IMG/M
3300006034|Ga0066656_10024562All Organisms → cellular organisms → Bacteria3276Open in IMG/M
3300006034|Ga0066656_11066463All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium519Open in IMG/M
3300006034|Ga0066656_11091981All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium513Open in IMG/M
3300006046|Ga0066652_101238081Not Available706Open in IMG/M
3300006791|Ga0066653_10440582All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300006791|Ga0066653_10519838All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium602Open in IMG/M
3300006796|Ga0066665_11465118All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium531Open in IMG/M
3300006797|Ga0066659_10625936All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium875Open in IMG/M
3300006797|Ga0066659_10727323Not Available814Open in IMG/M
3300006797|Ga0066659_10768569All Organisms → cellular organisms → Bacteria794Open in IMG/M
3300006797|Ga0066659_11856448Not Available511Open in IMG/M
3300006903|Ga0075426_10036522All Organisms → cellular organisms → Bacteria → Proteobacteria3512Open in IMG/M
3300009012|Ga0066710_102961834Not Available663Open in IMG/M
3300009012|Ga0066710_104137101Not Available542Open in IMG/M
3300009012|Ga0066710_104681518Not Available511Open in IMG/M
3300009090|Ga0099827_10009735Not Available6123Open in IMG/M
3300010304|Ga0134088_10212130Not Available928Open in IMG/M
3300010304|Ga0134088_10508777Not Available594Open in IMG/M
3300010304|Ga0134088_10528797Not Available582Open in IMG/M
3300010304|Ga0134088_10569058Not Available562Open in IMG/M
3300010323|Ga0134086_10071040All Organisms → cellular organisms → Bacteria1202Open in IMG/M
3300010323|Ga0134086_10363657All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300010325|Ga0134064_10148688All Organisms → cellular organisms → Bacteria808Open in IMG/M
3300010326|Ga0134065_10336229Not Available589Open in IMG/M
3300010329|Ga0134111_10200361All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300010335|Ga0134063_10320939All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes748Open in IMG/M
3300010364|Ga0134066_10332234All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium557Open in IMG/M
3300012198|Ga0137364_10009262All Organisms → cellular organisms → Bacteria5532Open in IMG/M
3300012198|Ga0137364_10873044All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300012198|Ga0137364_11363351Not Available526Open in IMG/M
3300012199|Ga0137383_10095538All Organisms → cellular organisms → Bacteria2155Open in IMG/M
3300012199|Ga0137383_10517928Not Available873Open in IMG/M
3300012200|Ga0137382_11283972All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300012201|Ga0137365_10023240All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes4802Open in IMG/M
3300012206|Ga0137380_10347408Not Available1323Open in IMG/M
3300012206|Ga0137380_10637368Not Available929Open in IMG/M
3300012207|Ga0137381_10098391All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2478Open in IMG/M
3300012207|Ga0137381_10209671All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1689Open in IMG/M
3300012208|Ga0137376_10139396All Organisms → cellular organisms → Bacteria2081Open in IMG/M
3300012208|Ga0137376_10445181All Organisms → cellular organisms → Bacteria1124Open in IMG/M
3300012208|Ga0137376_11796619All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium503Open in IMG/M
3300012209|Ga0137379_10099436All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2799Open in IMG/M
3300012209|Ga0137379_10550620All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1061Open in IMG/M
3300012211|Ga0137377_10825564All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium859Open in IMG/M
3300012211|Ga0137377_11352957All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300012211|Ga0137377_11539618All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300012211|Ga0137377_11766487Not Available539Open in IMG/M
3300012285|Ga0137370_10256455All Organisms → cellular organisms → Bacteria1037Open in IMG/M
3300012350|Ga0137372_10052007All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes3614Open in IMG/M
3300012351|Ga0137386_10247647All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1281Open in IMG/M
3300012356|Ga0137371_10168389Not Available1719Open in IMG/M
3300012357|Ga0137384_10037252All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium4008Open in IMG/M
3300012361|Ga0137360_10834868All Organisms → cellular organisms → Bacteria793Open in IMG/M
3300012362|Ga0137361_10042245Not Available3707Open in IMG/M
3300012388|Ga0134031_1281049All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300012683|Ga0137398_10866487Not Available630Open in IMG/M
3300012925|Ga0137419_10173509All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1576Open in IMG/M
3300012925|Ga0137419_11374638All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium595Open in IMG/M
3300012929|Ga0137404_11603117All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300012930|Ga0137407_10057254All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium3192Open in IMG/M
3300012930|Ga0137407_11073278All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium763Open in IMG/M
3300012972|Ga0134077_10154777Not Available916Open in IMG/M
3300012972|Ga0134077_10334456All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300012975|Ga0134110_10251933Not Available752Open in IMG/M
3300012977|Ga0134087_10624119Not Available561Open in IMG/M
3300012977|Ga0134087_10802868All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300014154|Ga0134075_10010069All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes3636Open in IMG/M
3300014157|Ga0134078_10211217All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium796Open in IMG/M
3300015357|Ga0134072_10416671All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium533Open in IMG/M
3300015358|Ga0134089_10123157All Organisms → cellular organisms → Bacteria1008Open in IMG/M
3300015358|Ga0134089_10361428All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium613Open in IMG/M
3300017657|Ga0134074_1207384Not Available697Open in IMG/M
3300017657|Ga0134074_1303381All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300018431|Ga0066655_10019574All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium3126Open in IMG/M
3300018433|Ga0066667_12184727Not Available515Open in IMG/M
3300018482|Ga0066669_10574790All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium985Open in IMG/M
3300018482|Ga0066669_11269763Not Available665Open in IMG/M
3300018482|Ga0066669_12052711Not Available537Open in IMG/M
3300018482|Ga0066669_12249374Not Available518Open in IMG/M
3300026277|Ga0209350_1009948All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium3105Open in IMG/M
3300026277|Ga0209350_1017554All Organisms → cellular organisms → Bacteria2230Open in IMG/M
3300026296|Ga0209235_1043957All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2199Open in IMG/M
3300026297|Ga0209237_1048958All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_92139Open in IMG/M
3300026297|Ga0209237_1154067Not Available881Open in IMG/M
3300026307|Ga0209469_1122055Not Available634Open in IMG/M
3300026310|Ga0209239_1030279All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2580Open in IMG/M
3300026313|Ga0209761_1030571All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3237Open in IMG/M
3300026313|Ga0209761_1032476All Organisms → cellular organisms → Bacteria3116Open in IMG/M
3300026314|Ga0209268_1169345All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300026315|Ga0209686_1005870All Organisms → cellular organisms → Bacteria → Proteobacteria5389Open in IMG/M
3300026316|Ga0209155_1056091All Organisms → cellular organisms → Bacteria1518Open in IMG/M
3300026326|Ga0209801_1273512Not Available617Open in IMG/M
3300026329|Ga0209375_1007440All Organisms → cellular organisms → Bacteria7050Open in IMG/M
3300026331|Ga0209267_1295752All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium539Open in IMG/M
3300026332|Ga0209803_1092052Not Available1252Open in IMG/M
3300026333|Ga0209158_1315302Not Available540Open in IMG/M
3300026527|Ga0209059_1187286Not Available710Open in IMG/M
3300026528|Ga0209378_1031043All Organisms → cellular organisms → Bacteria2814Open in IMG/M
3300026538|Ga0209056_10380171Not Available895Open in IMG/M
3300026538|Ga0209056_10462504Not Available702Open in IMG/M
3300026538|Ga0209056_10529753All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Desulfuromonas → Desulfuromonas soudanensis605Open in IMG/M
3300026540|Ga0209376_1191271All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes940Open in IMG/M
3300026542|Ga0209805_1118747All Organisms → cellular organisms → Bacteria1250Open in IMG/M
3300026547|Ga0209156_10001713All Organisms → cellular organisms → Bacteria17651Open in IMG/M
3300026548|Ga0209161_10271905Not Available857Open in IMG/M
3300026550|Ga0209474_10363080All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300027706|Ga0209581_1001926All Organisms → cellular organisms → Bacteria21960Open in IMG/M
3300027882|Ga0209590_10001129All Organisms → cellular organisms → Bacteria9854Open in IMG/M
3300027903|Ga0209488_10034957All Organisms → cellular organisms → Bacteria3670Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil35.90%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil27.56%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil15.38%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil15.38%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.56%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.28%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.28%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.64%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012388Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027706Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25381J37097_107429923300002557Grasslands SoilWGARLTALPNKRLKLTGPAFRGSVGLRSNELVRQGVVLAPTGVRPAA*
JGI25384J37096_1004854233300002561Grasslands SoilMTAAQRGPPNKRLKLTGPAFRGSGRLSTGPQIPQGGPLAPAGPRP
JGI25382J37095_1002846333300002562Grasslands SoilMVKGGLPNQRLKLAGPAFRGSVRLCASDLVPQGGLLAPAGTRPAA*
JGI25382J37095_1006792613300002562Grasslands SoilLPNKRLKLTGPAFRGGVRLCPSRPVPQAGALAPAGRRPAA*
JGI25382J37095_1015418023300002562Grasslands SoilEVKQPPNMRLKLTGPALKGSVRLCAGEPVAQRRALAPAGLRPAA*
JGI25382J43887_1007315843300002908Grasslands SoilMPNKRLKLTGPAFKGSMCLCANPQIPQHGALAPAGARPAA*
JGI25382J43887_1040504433300002908Grasslands SoilPPNKRLKLTGPAFRGSLRLCANELVRQGGVLAPAGARTAA*
Ga0066677_1000931113300005171SoilPVNPGAVMPNKRLKLPGPAFRGSGRLCTGEPVPQGGALALAGFRPAA*
Ga0066680_1002509943300005174SoilMVVKLLPNKRLKLAGPAFRGSVPLSPSELVPQGGALAPTGARTAA*
Ga0066673_1079565623300005175SoilRQPPNKRLKLTGPAFKGTGRLCASRRVTQGGALAPVGARPAA*
Ga0066679_1048443323300005176SoilMNMLVPNKRLKLTGPAFRGSVCLCANELVLQGRALAPAGHRPAA*
Ga0066688_1062185213300005178SoilVLPNKRLKLTGPAFKGTLRLSANELVPQREVLAPSGARPAA*
Ga0066688_1101865823300005178SoilPNKRLKLAGPAFRGGVRLCTNDLVPQGGALAPAGVRPAA*
Ga0066684_1100997023300005179SoilSNKRLKLPGPAFRGSVRLRARQQVTQGGVLAPASRRPAA*
Ga0066675_1002130683300005187SoilMPNKRLKLPGPAFKGTVRLSAGQLVTQGGALAPASARPAA*
Ga0066675_1007409623300005187SoilMLLPNKPLKLAGPALKGTLLLCASQLVTQGGALAPVGARPAA*
Ga0066675_1096764113300005187SoilLKAPRPNKRLKLAGPAFKGSLRLCARQQVTQGRALAPAGRCPAA*
Ga0066686_1064478813300005446SoilMRLPNMRLKLPGPVFRGSVRLCPDELVPQGEALAPAGARPAA*
Ga0070707_10016997243300005468Corn, Switchgrass And Miscanthus RhizosphereMLPNMRLKLAGPAFRGSERLCASPHVPQRGVLAPAGARPAA*
Ga0070699_10073157823300005518Corn, Switchgrass And Miscanthus RhizosphereVLVLPNMRLKLTGPAFKGILRLCASRLVTQSMVLAPAGARPAA*
Ga0070741_10008894293300005529Surface SoilMIKQPPNKRLKLTGLAFKGSVRSCASQLVPQGGALAPACARPAA*
Ga0066701_1041108523300005552SoilTWGIVSLEPPNKRLKLPGPAFRGTVRLCVNQLVPQGRVLAPAGARPAA*
Ga0066695_1051413523300005553SoilMSPRKLPNKRLKLTGPPFRGGVRLCASALVPQGRVLAPAGARPAA*
Ga0066695_1061903913300005553SoilVKSLEPLIRAVRPNKRLKLTGPAFRGGVCLCANELVPQGGALAPASLRPA
Ga0066695_1062569313300005553SoilAPPNMRLKLAGPALKGTVRLSASQPVTHGGALALAGARPAA*
Ga0066707_1065611713300005556SoilSHRDCEHVWPRPNKRLKLTGPAFRGSVCLSADELVPQGGVLAPAGARPAA*
Ga0066704_1020371413300005557SoilKLPGPAFRGSVRLCANELVPEGGVLVPAGARPAA*
Ga0066704_1103874213300005557SoilRPNKRLKLAGPAFRGGVRLCANDLVPQGGELAPTGVRPAA*
Ga0066698_1036099613300005558SoilVLPNKRLKLTGPAFKGRVRLCARKQVTQGGALAPAGARPAA*
Ga0066699_1024277433300005561SoilMVVKLLPNKRLKLAGPAFRGSVRLSPSELVPQGGALAPTGARPAA*
Ga0066699_1069937833300005561SoilNKRLKLAGPAFRGSVRLRTRVQIPQYGALAPAGARPAA*
Ga0066693_1006125143300005566SoilMPPNKRLKLPGPAFEDSVRLCPNQLVQQGGVLAPASARPAA*
Ga0066705_1058242213300005569SoilAPNKRLKLPGPAFRGSVRLRARQQVTQGGVLAPASRRPAA*
Ga0066705_1060018513300005569SoilNKRLKLTGPAFKGSVRLCANELVPQGGVLAPAGARPTA*
Ga0066705_1065335923300005569SoilPNKRLKVAGPAFRGSTRLRAGQPVPLGGVLAPAGARPAA*
Ga0066694_1047149523300005574SoilMPPNKRLKVAGPAFRGSVRLCANGLVPQCAALAPAG
Ga0066702_1084545413300005575SoilPPNKRLKLAGPAFRGGVRLCPGEAVPQGVVLAPAGARPAA*
Ga0066708_1007903913300005576SoilPLPNKRLKLTGPAFRGSVRLCANALVPQGAVLAPTGARPAA*
Ga0066654_1044457123300005587SoilLPNKRLKLPGPAFKGSIRLCTSLPIPQHEALAPVGARPAP*
Ga0066651_1000658263300006031SoilVTPLSNKRLKLAGPAFRGSVRLRTSVQIPQYGALAPAGARPAA*
Ga0066656_1002456253300006034SoilMLPNKRLKLAGPAFRGGGSLCASQPMTQGEALAPTCPRPAA*
Ga0066656_1106646323300006034SoilWPPSNKRLKLAGPTFRGGVRLYANELVPRGGVLAPAGARPPA*
Ga0066656_1109198123300006034SoilQPNKRLKLTGPALRGSGGLCASKLVPQAEVLVPGRVRPAA*
Ga0066652_10123808113300006046SoilKRLKLAGPVLKESVRLCANELVPQGEALAPAGVRPAA*
Ga0066653_1044058233300006791SoilLPNKRLKLTGPAFRGGVGLCADELVPQGGALAPTGARPAA*
Ga0066653_1051983823300006791SoilLPNKRLKLTGPALRRSVRLCAGQQFTQQGALAPAGVRPAA*
Ga0066665_1146511823300006796SoilMIGTWLPNKRLKLTGPAFRGSERLCPSPLIPQGGVLAPAGARPAA
Ga0066659_1062593613300006797SoilPPNKRLKLAGPAFKGTVRLSASQPVTHGGALALAGARPAA*
Ga0066659_1072732313300006797SoilMRESRERRPNKRLKLTWPALRGTVNLPANGLVTQGGALAPPGTRPAA*
Ga0066659_1076856923300006797SoilMRLKLPGPALNGTVRSSAGGQVTQRGALAPVGVRPAA*
Ga0066659_1185644813300006797SoilLPNKRLKLPGPAFKGTVRLCASELVPQGGALAPAGARPAA*
Ga0075426_1003652223300006903Populus RhizosphereMIGRGAVAPNKRLQLSGPAFRGRVRLCASEQIPQRGVLAPTGARPAA*
Ga0066710_10296183413300009012Grasslands SoilVAVPPNKRLKLPGPAFRGCVRLCANVLVPQGEALAPAGARPAA
Ga0066710_10413710113300009012Grasslands SoilVGWLPNKRLKLPGPAFGGSVRLCTSQVIPQGGALAPAGARP
Ga0066710_10468151823300009012Grasslands SoilLPNKRLKLAGPASKGSVRLCARQQVTEGGALGLPGR
Ga0099827_1000973553300009090Vadose Zone SoilMMPPNKRLKVAGPAFRGRVRLCASPQVPQGGALAPAGARPAA*
Ga0134088_1021213033300010304Grasslands SoilMLLPPNKRLKLAGPALKGSVRLCPDELVPHGEALAPAGVRPAA
Ga0134088_1050877713300010304Grasslands SoilTAFVAAVLPNMRLKLAGLALKGSRHLCGSRPVTQGGALAPARARPAA*
Ga0134088_1052879723300010304Grasslands SoilPNKRLKLPGPAFRGNVRLFTGELIPQGGALAPAGVRPAA*
Ga0134088_1056905813300010304Grasslands SoilLMPLPNKRLKLTAPALKGNARLRASQLVPQDGALAPAGPRPAA*
Ga0134086_1007104023300010323Grasslands SoilWERSVRAQPNKRLKLPGPAFRGSVRLCPNKLVPQRGALAPAGVRPAA*
Ga0134086_1036365713300010323Grasslands SoilVIKWCARVRPNKRLKLTGPAFRGTRRLCADELVPQGRALAPAGARP
Ga0134064_1014868813300010325Grasslands SoilYECTPPNKRLKLTGPAFRGSVRLCPTQLVTQGGALAPAGARPAA*
Ga0134065_1033622923300010326Grasslands SoilLKVTGPAFKGGVGLCTNPLVQQGGALAPASARPAA*
Ga0134111_1020036113300010329Grasslands SoilPNKRLKLPGPAFRGDVRLCANEVVPQGGVLAPADPRPAA*
Ga0134063_1032093923300010335Grasslands SoilLKSVPPNKRLKLTGPAFKGSVRLCANELVPQGGVLAPAGARPTA*
Ga0134066_1033223423300010364Grasslands SoilMPPNKRLKLPGPAFEDSVRLCPNQLVQQGGVLAPA
Ga0137364_1000926283300012198Vadose Zone SoilMGPLPNKRLKLTGPAFKGSPRLCARQQVTQGGALAPAGARPAA*
Ga0137364_1087304413300012198Vadose Zone SoilMPPNKRLKLTGPAFRGSVRVRTSLLVPQGGALAPT
Ga0137364_1136335113300012198Vadose Zone SoilMPPNKRLKLPGPAFRGSVRLCASLHIPQPEALAPVSVRPA
Ga0137383_1009553813300012199Vadose Zone SoilMLRPNKRLKLPGPVFRGSVRLCANKLVPQGWALAPAGARPAA
Ga0137383_1051792813300012199Vadose Zone SoilVALPNKRLKLPGPAFRGTVRLCANQPIPQGGALAPAGARPAA*
Ga0137382_1128397223300012200Vadose Zone SoilMPPNKRLKLAGPAFRGSGGLCTSHLIPQGGALAPVG
Ga0137365_1002324053300012201Vadose Zone SoilVKGLLPNKRLKLAGPAFRGSRRLCANELVPQGGALAPASARPAA*
Ga0137380_1034740823300012206Vadose Zone SoilMHSAQRPNKRLKLPGPAFSGGVRLCPSQQVPQDGALAPASGRPAA
Ga0137380_1063736833300012206Vadose Zone SoilGALMPNKRLKLPGPAFRGGVRLCADELVPQGAVLAPAGARPAA*
Ga0137381_1009839153300012207Vadose Zone SoilMISLVCVLRLPNKRLKLAGPAFRGGVRLCASELVPQGGVLAPAGARPAA*
Ga0137381_1020967113300012207Vadose Zone SoilTRTSGLNSLDRLPNKRLKLAGPAFRGSVRLCPSEPIPQGAVLAPVGGRPAA*
Ga0137376_1013939613300012208Vadose Zone SoilMSAPPNKRLKLTGPGFRGSVRLCSNELVPQGAVLAPVGARPAA*
Ga0137376_1044518123300012208Vadose Zone SoilMSSGALPNKRLKLTGRAFRGNGGLCPSQLVTQGGALAPAGARPAA*
Ga0137376_1179661913300012208Vadose Zone SoilMKRTPNKPLKLAGRAFKGSVRLFANELVPQGGVLAP
Ga0137379_1009943633300012209Vadose Zone SoilMETLPNKRLKLPGPAFRGGGRLCANELVPQGGELAPADARPAA*
Ga0137379_1055062033300012209Vadose Zone SoilMLPNKRLKLAGPAFRGSAPLCTSRQIPQHGALAPVGA
Ga0137377_1082556413300012211Vadose Zone SoilLKLPGPALKGSVRLYTNELVPQGGALAPAGARPAA*
Ga0137377_1135295713300012211Vadose Zone SoilMRLPNKRLKLPGPALKGTVRLCTSQPISQSGALAPAG
Ga0137377_1153961813300012211Vadose Zone SoilMSDSERRQPNKRLKLAGPALSGSVRLCPDEAVPQGGALVPAGA
Ga0137377_1176648713300012211Vadose Zone SoilRLKLPGPAFKGCVRLCANELVPQAGALAPAGVRPAA*
Ga0137370_1025645513300012285Vadose Zone SoilVQMTFRQPSNKRLKLAGPAFRGSLRLCAHQQVTQGGALAPSGARPAA*
Ga0137372_1005200773300012350Vadose Zone SoilMTRLVGGRVPNKRLKLAGPAFSGSVGLCANELVPQGGPLAPAGASPAA*
Ga0137386_1024764713300012351Vadose Zone SoilMSGREPPNKRLKLPGPAFRRDVRLRASQLVPQGGVLAPAGARPAAKA
Ga0137371_1016838943300012356Vadose Zone SoilRNTRLVASNLHLVRQQPNKRLKLPGPAFKGSGRFCTNQPVPQGGALAPAGVRPAA*
Ga0137384_1003725213300012357Vadose Zone SoilMYPLQPNKRLKLTGPAFRGSVRLCANEFVPQGGVLAPAGARPAA*
Ga0137360_10014699113300012361Vadose Zone SoilRRCGLGPMVKGGLPNQRLKLAGPAFRGSVRLCASDLVPQGGLLAPVGTRPAA*
Ga0137360_1083486823300012361Vadose Zone SoilMRLKLAGPAFKGTLRLCTSQPVTQGEALAPASPRPAAYARSVR
Ga0137360_1104019713300012361Vadose Zone SoilMRRLGLGTMVKGGLPNQRLKLAGPAFRGSVRLCASDLVPQGGLLAPAGTRPA
Ga0137361_1004224563300012362Vadose Zone SoilMRLKLTGPAFRGSARLCASLQIPQLWALAPAGVRPAA*
Ga0137361_1027018223300012362Vadose Zone SoilMRRLGLGTMVKGGLPNQRLKLAGPAFRGSVRLCASDLVPQGGLLAPAGTRPAA*
Ga0134031_128104923300012388Grasslands SoilMPNKRLKLPGPAFRGDVRLCTNELVPQGGVLAPAGARPA
Ga0137398_1086648713300012683Vadose Zone SoilMGRTPPNKRLKLTGPAFRGIVRLCSSLQIPQHGALAPADACA
Ga0137395_1003002563300012917Vadose Zone SoilGLGPMVKGGLPNQRLKLAGPAFRGSVRLCASDLVPQGGLLAPVGTRPAA*
Ga0137395_1072991613300012917Vadose Zone SoilMRRLGLGPMVKGGLPNQRLKLAGPAFRGSVRLCASDLVPQGGLL
Ga0137359_1000769923300012923Vadose Zone SoilMRRCGLGPMVKGGLPNQRLKLAGPAFRGSVRLCASDLVPQGGLLAPVGTRPAA*
Ga0137419_1017350913300012925Vadose Zone SoilKLTGPAFKGTVRLCANDLVPQGRVLAPASLRPAA*
Ga0137419_1137463813300012925Vadose Zone SoilVHPGAVMPNKRLKLPGPAFKGYIRLRANELIPQSEALAPVGLRPAA*
Ga0137404_1160311713300012929Vadose Zone SoilLALPNKRLKLPGPAFRGGVRLYANELVPQGDVLAPVGARPAA*
Ga0137407_1005725453300012930Vadose Zone SoilMNFVEHRPNKRLKLPGPAFRGIVRLCPCQPAPQCGALAPAGARPAA*
Ga0137407_1107327813300012930Vadose Zone SoilNKRLKLAGPALKGSVRLCANELVPQGEALAPAGVRPAA*
Ga0134077_1015477723300012972Grasslands SoilMMPKLLPNKRLKLAGPALKGSVRLCPDELVPHGEALAPAGVRPAA*
Ga0134077_1033445633300012972Grasslands SoilMPNKRLKPGPAFRGGVRLCADELVPQGAVLAPAGARP
Ga0134110_1025193323300012975Grasslands SoilPGAVMPNKRLKLPGPAFKGTVRLSAGQLVTQGGALAPASARPAA*
Ga0134087_1062411913300012977Grasslands SoilMVVKLLPNKRLKLAGPAFRGSVRLSPSELVPQGGALPPTG
Ga0134087_1080286813300012977Grasslands SoilHLKLPGPAFKGTVRLSAGQLVTQGGALALASARPAA*
Ga0134075_1001006923300014154Grasslands SoilMKVRPNKRLKLAGPAFRGGIRLCANGLVPQGGVLAPPSVRPAA*
Ga0134078_1021121713300014157Grasslands SoilNMRLKLTGLAFRGSVRLRANVLVPQGRVLAPPSARPAA*
Ga0134072_1041667123300015357Grasslands SoilCQGALSLPPNMPLKLAGPAFKGSLRFCAGEPVTQGGALAPVGARPAA*
Ga0134089_1012315743300015358Grasslands SoilVTQQPNKRLKLPGPAFKGTVRLSANELVPQGGALAPTGAR
Ga0134089_1036142823300015358Grasslands SoilVLPNKRLKLPGPAFRGSVRLCPSQLVPQRGALAPAGA
Ga0134074_120738423300017657Grasslands SoilVPPNKRLKLTGPASRGSLRLCASELVRQGGALAPAS
Ga0134074_130338113300017657Grasslands SoilKRLKLPGPAFRGDVRLCANEVVPQGGVLAPADPRPAA
Ga0066655_1001957423300018431Grasslands SoilMLPNKRLKLAGPAFRGGGSLCASQPMTQGEALAPTCPRPAA
Ga0066667_1218472713300018433Grasslands SoilNKRLKLAGPAFKGTVRSSANELVLQGGALAPAGARPAA
Ga0066669_1057479013300018482Grasslands SoilPNKRLKLPGPAFKGCVRLCANDLVPQGGALAPAGPRPAA
Ga0066669_1126976313300018482Grasslands SoilRVPNKRLKLPGPAFKGCVRLCANELVPQGEALAPAGARPAA
Ga0066669_1205271123300018482Grasslands SoilMKGLLPNKRLKLAGPALKGSRRLCANELVPQGGALAPAGARP
Ga0066669_1224937413300018482Grasslands SoilMARLAIVRVQPNKRLKLPGPAFKGCVRLCANELVPQGGALAPAGARPAA
Ga0137417_144809843300024330Vadose Zone SoilMQRLGLGPMVKGGLPDQRLKLTGPAFRGSGRLCPGQLVPQGGALAPAGTRPAA
Ga0209350_100994853300026277Grasslands SoilMNMLVPNKRLKLTGPAFRGSVCLCANELVLQGRALAPAGHRPAA
Ga0209350_101755413300026277Grasslands SoilLSNKRLKLAGPAFRGSVRLRTSVQIPQYGALAPADARPAA
Ga0209235_104395713300026296Grasslands SoilMVVKLLPNKRLKLAGPAFRGSVPLSPSELVPQGGALAPTGARTAA
Ga0209237_104895833300026297Grasslands SoilMSGREPPNKRLKLPGPAFRGDVRLRASQFVAQGRVLAPAGARPAA
Ga0209237_115406713300026297Grasslands SoilMPSASRAPNKRLKLAGPAFRGMVRLCASQPVAQGGAL
Ga0209469_112205513300026307SoilPNKRLKLTGPAFRGGVCLCANELVPQGGALAPASLRPAA
Ga0209239_103027913300026310Grasslands SoilVIAGLWPNKRLKLAGPAFSGSECLCTSRPIPQGEALAPAGA
Ga0209761_103057123300026313Grasslands SoilMSVPPNKRLKLAGPAFRGSRRLCADELVPQGGALALAGARPAA
Ga0209761_103247613300026313Grasslands SoilLHLLYESAPPNKRLKLTGPAFKGTVRLCANDLVPQGGVLA
Ga0209268_116934523300026314SoilHEGEAALPNKRLKLTGPAFRGGVGLCADELVPQGGALAPTGARPAA
Ga0209686_1005870103300026315SoilMPNKRLKLPGPAFRGSGRLCTGEPVPQGGALALAGFRPAA
Ga0209155_105609143300026316SoilGLRLKSVPPNKRLKLAGPAFKGSVRLCASRRVPQHGALAPAGAYPAA
Ga0209801_127351223300026326SoilRLKLPGPAFRGSVRLCANELVPEGGVLVPAGARPAA
Ga0209375_100744043300026329SoilVGWLPNKRLKLPGPAFGGSVRLCTSQVIPQGGALAPAGARPAA
Ga0209267_129575213300026331SoilMVVKLLPNKRLKLAGPAFRGSVRLAPSELVPQGGALAP
Ga0209803_109205223300026332SoilKRLKLAGPAFKGTVRLPANELVPQSGALAPAGVRPAA
Ga0209158_131530223300026333SoilNKRLKLAGPAFKGTVRLPANELVPQSGALAPAGVRPAA
Ga0209059_118728623300026527SoilMPPPNKRLKLAGPALRGILRLCASQPVPQGGELAPAG
Ga0209378_103104343300026528SoilVTPLSNKRLKLAGPAFRGSVRLRTSVQIPQYGALAPAGARPAA
Ga0209056_1038017133300026538SoilLKLAGPAFKGTVRLSASQPVTHGGALALAGARPAA
Ga0209056_1046250413300026538SoilNKRLKLPGPAFRGSGRLCTGEPVPQGGALALAGFRPAA
Ga0209056_1052975313300026538SoilMRSRVIAMGCQPPNKRLKLTGPAFRGGVRLCASQPVPQGGALAPASARPAA
Ga0209376_119127123300026540SoilVPNKRLKLPGPAFRGDVRLCANELVPQGGVLASAG
Ga0209805_111874733300026542SoilMVVKLLPNKRLKLAGPAFRGSVRLSPSELVPQGGALAPTGARPAA
Ga0209156_1000171353300026547SoilMPNKRLKLPGPAFRRRVRLCANELVPQVGVLAPAGARPAA
Ga0209161_1027190513300026548SoilVKPRPNKRLKLAGPAFKGTVRLPANELVPQSGALAPAGVRPAA
Ga0209474_1036308013300026550SoilSVAGTLPNKRLKLTGPAFKGSGRLCTSQPIPQGGALAPAGTLPAA
Ga0209581_1001926293300027706Surface SoilMIKQPPNKRLKLTGLAFKGSVRSCASQLVPQGGALAPACARPAA
Ga0209590_10001129143300027882Vadose Zone SoilMMPPNKRLKVAGPAFRGRVRLCASPQVPQGGALAPAGARPAA
Ga0209488_1003495723300027903Vadose Zone SoilMRRLGLGTMVKGGLPNQRLKLAGPAFRGSVRLCASDLVPQGGLLAPAGTRPAA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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