Metagenome Family F043330

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F043330
Family Type	Metagenome
Number of Sequences	156
Average Sequence Length	62 residues
Representative Sequence	MTVGSANVDDPQELLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRSRDG
Number of Associated Samples	120
Number of Associated Scaffolds	156

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	57.05 %
% of genes near scaffold ends (potentially truncated)	43.59 %
% of genes from short scaffolds (< 2000 bps)	87.18 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (58.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.641 % of family members)
Environment Ontology (ENVO)	Unclassified (37.179 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.564 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 156 Family Scaffolds
PF05235	CHAD	3.85
PF09118	GO-like_E_set	3.85
PF01381	HTH_3	3.21
PF03237	Terminase_6N	1.92
PF01068	DNA_ligase_A_M	1.92
PF04392	ABC_sub_bind	1.28
PF13148	DUF3987	1.28
PF12931	Sec16_C	0.64
PF05532	CsbD	0.64
PF05717	TnpB_IS66	0.64
PF02652	Lactate_perm	0.64
PF02371	Transposase_20	0.64
PF07750	GcrA	0.64
PF00872	Transposase_mut	0.64
PF00589	Phage_integrase	0.64
PF13546	DDE_5	0.64
PF13751	DDE_Tnp_1_6	0.64
PF11306	DUF3108	0.64
PF01391	Collagen	0.64
PF01527	HTH_Tnp_1	0.64

COG ID	Name	Functional Category	% Frequency in 156 Family Scaffolds
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	3.85
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	3.85
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	1.92
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.92
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.28
COG1620	L-lactate permease	Energy production and conversion [C]	0.64
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.64
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.64
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.64
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.64
COG5352	Uncharacterized conserved protein	Function unknown [S]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.33 %
Unclassified	root	N/A	41.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.33 %
Unclassified	root	N/A	41.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.33 %
Unclassified	root	N/A	41.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	9.62 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	33.33 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	13.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.62 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.05 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.21 %
Micropepsales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales	0.64 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.69 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	5.77 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.21 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.28 %
Pleomorphomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae	1.28 %
Micropepsaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae	0.64 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.64 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.69 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	5.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.21 %
Pleomorphomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas	1.28 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.28 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.64 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.64 %
Rhizomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.69 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	5.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.21 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas → environmental samples	1.28 %
unclassified Rhizomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → unclassified Rhizomicrobium	0.64 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.64 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.64 %
Magnetospirillum moscoviense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum moscoviense	0.64 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.69 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	5.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.21 %
uncultured Pleomorphomonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas → environmental samples → uncultured Pleomorphomonas sp.	1.28 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	0.64 %
Rhizomicrobium sp. SCGC AG-212-E05	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → unclassified Rhizomicrobium → Rhizomicrobium sp. SCGC AG-212-E05	0.64 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.64 %
Magnetospirillum moscoviense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum moscoviense	0.64 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.64 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10021519	Not Available	1766	Open in IMG/M
3300000891\|JGI10214J12806_11855120	All Organisms → cellular organisms → Bacteria → Proteobacteria	710	Open in IMG/M
3300000956\|JGI10216J12902_117631500	Not Available	590	Open in IMG/M
3300001545\|JGI12630J15595_10005016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2881	Open in IMG/M
3300001867\|JGI12627J18819_10142205	All Organisms → cellular organisms → Bacteria → Proteobacteria	980	Open in IMG/M
3300001867\|JGI12627J18819_10349007	Not Available	598	Open in IMG/M
3300002245\|JGIcombinedJ26739_101379178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598	Open in IMG/M
3300004633\|Ga0066395_10339706	Not Available	832	Open in IMG/M
3300005165\|Ga0066869_10076332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	635	Open in IMG/M
3300005174\|Ga0066680_10268176	Not Available	1087	Open in IMG/M
3300005181\|Ga0066678_10151408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1451	Open in IMG/M
3300005186\|Ga0066676_11013055	Not Available	551	Open in IMG/M
3300005187\|Ga0066675_10484605	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300005332\|Ga0066388_102906941	Not Available	875	Open in IMG/M
3300005332\|Ga0066388_105184805	Not Available	661	Open in IMG/M
3300005435\|Ga0070714_100828193	Not Available	897	Open in IMG/M
3300005440\|Ga0070705_100866341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas → environmental samples → uncultured Pleomorphomonas sp.	724	Open in IMG/M
3300005467\|Ga0070706_100041929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	4227	Open in IMG/M
3300005467\|Ga0070706_100281012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas → environmental samples → uncultured Pleomorphomonas sp.	1553	Open in IMG/M
3300005468\|Ga0070707_100260078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1689	Open in IMG/M
3300005471\|Ga0070698_100842862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	861	Open in IMG/M
3300005471\|Ga0070698_101466245	Not Available	633	Open in IMG/M
3300005518\|Ga0070699_100323041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1387	Open in IMG/M
3300005536\|Ga0070697_100093534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → unclassified Rhizomicrobium → Rhizomicrobium sp. SCGC AG-212-E05	2489	Open in IMG/M
3300005552\|Ga0066701_10752512	Not Available	583	Open in IMG/M
3300005554\|Ga0066661_10550226	Not Available	691	Open in IMG/M
3300005559\|Ga0066700_10667200	Not Available	718	Open in IMG/M
3300005561\|Ga0066699_10701286	Not Available	722	Open in IMG/M
3300005598\|Ga0066706_10382716	Not Available	1119	Open in IMG/M
3300005764\|Ga0066903_100072482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	4421	Open in IMG/M
3300005764\|Ga0066903_100525892	All Organisms → cellular organisms → Bacteria → Proteobacteria	2016	Open in IMG/M
3300005764\|Ga0066903_100658407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1833	Open in IMG/M
3300005764\|Ga0066903_101458219	Not Available	1289	Open in IMG/M
3300005764\|Ga0066903_102213198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1060	Open in IMG/M
3300005764\|Ga0066903_102222292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1058	Open in IMG/M
3300005764\|Ga0066903_102294166	Not Available	1042	Open in IMG/M
3300005764\|Ga0066903_102331089	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300006028\|Ga0070717_10086369	All Organisms → cellular organisms → Bacteria	2640	Open in IMG/M
3300006028\|Ga0070717_11165438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	701	Open in IMG/M
3300006028\|Ga0070717_11977740	Not Available	525	Open in IMG/M
3300006755\|Ga0079222_11787503	All Organisms → cellular organisms → Bacteria → Proteobacteria	594	Open in IMG/M
3300006791\|Ga0066653_10456251	Not Available	651	Open in IMG/M
3300006794\|Ga0066658_10449657	Not Available	701	Open in IMG/M
3300006800\|Ga0066660_11117581	Not Available	623	Open in IMG/M
3300006844\|Ga0075428_102337364	Not Available	550	Open in IMG/M
3300009162\|Ga0075423_11152537	Not Available	826	Open in IMG/M
3300010043\|Ga0126380_11524470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	593	Open in IMG/M
3300010301\|Ga0134070_10346079	Not Available	576	Open in IMG/M
3300010358\|Ga0126370_12393008	Not Available	524	Open in IMG/M
3300010359\|Ga0126376_11685762	Not Available	668	Open in IMG/M
3300010360\|Ga0126372_10271337	All Organisms → cellular organisms → Bacteria	1470	Open in IMG/M
3300010361\|Ga0126378_12983854	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300010362\|Ga0126377_12729778	Not Available	569	Open in IMG/M
3300010371\|Ga0134125_10851025	All Organisms → cellular organisms → Bacteria → Proteobacteria	1002	Open in IMG/M
3300010398\|Ga0126383_10729477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1071	Open in IMG/M
3300012199\|Ga0137383_10515988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	875	Open in IMG/M
3300012201\|Ga0137365_10080578	All Organisms → cellular organisms → Bacteria	2454	Open in IMG/M
3300012205\|Ga0137362_10050688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3383	Open in IMG/M
3300012205\|Ga0137362_11574441	Not Available	544	Open in IMG/M
3300012206\|Ga0137380_11052336	Not Available	694	Open in IMG/M
3300012209\|Ga0137379_11361183	Not Available	614	Open in IMG/M
3300012210\|Ga0137378_11178580	Not Available	682	Open in IMG/M
3300012211\|Ga0137377_10449440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1227	Open in IMG/M
3300012350\|Ga0137372_10104539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2371	Open in IMG/M
3300012353\|Ga0137367_10226337	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300012354\|Ga0137366_10084590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2412	Open in IMG/M
3300012354\|Ga0137366_10811418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300012356\|Ga0137371_10385673	Not Available	1087	Open in IMG/M
3300012357\|Ga0137384_10374086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1179	Open in IMG/M
3300012357\|Ga0137384_10476638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1026	Open in IMG/M
3300012359\|Ga0137385_10326002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1318	Open in IMG/M
3300012361\|Ga0137360_11487716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300012532\|Ga0137373_11072844	Not Available	578	Open in IMG/M
3300012917\|Ga0137395_11054484	Not Available	579	Open in IMG/M
3300012930\|Ga0137407_11110970	Not Available	750	Open in IMG/M
3300012948\|Ga0126375_10358123	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300012948\|Ga0126375_11532260	Not Available	571	Open in IMG/M
3300012975\|Ga0134110_10082936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1284	Open in IMG/M
3300012989\|Ga0164305_10242647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1296	Open in IMG/M
3300012989\|Ga0164305_10574513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	901	Open in IMG/M
3300016319\|Ga0182033_11612372	Not Available	587	Open in IMG/M
3300016341\|Ga0182035_10974183	All Organisms → cellular organisms → Bacteria → Proteobacteria	751	Open in IMG/M
3300016357\|Ga0182032_11423180	Not Available	601	Open in IMG/M
3300016357\|Ga0182032_12010652	Not Available	507	Open in IMG/M
3300016387\|Ga0182040_10425625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1047	Open in IMG/M
3300016404\|Ga0182037_10850718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300016404\|Ga0182037_10942891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	750	Open in IMG/M
3300016422\|Ga0182039_10430499	Not Available	1127	Open in IMG/M
3300018468\|Ga0066662_10561432	All Organisms → cellular organisms → Bacteria → Proteobacteria	1058	Open in IMG/M
3300021168\|Ga0210406_10312772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1275	Open in IMG/M
3300021168\|Ga0210406_11361303	Not Available	508	Open in IMG/M
3300021178\|Ga0210408_10405258	All Organisms → cellular organisms → Bacteria → Proteobacteria	1086	Open in IMG/M
3300021178\|Ga0210408_11001644	Not Available	646	Open in IMG/M
3300021372\|Ga0213877_10228133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M
3300021432\|Ga0210384_10302578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1440	Open in IMG/M
3300021432\|Ga0210384_11426502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300021559\|Ga0210409_10650704	Not Available	924	Open in IMG/M
3300025910\|Ga0207684_10049250	All Organisms → cellular organisms → Bacteria	3575	Open in IMG/M
3300025910\|Ga0207684_10070476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2971	Open in IMG/M
3300025928\|Ga0207700_10921819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	782	Open in IMG/M
3300025928\|Ga0207700_11448372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum moscoviense	610	Open in IMG/M
3300026548\|Ga0209161_10258291	Not Available	896	Open in IMG/M
3300027576\|Ga0209003_1086024	Not Available	587	Open in IMG/M
3300028047\|Ga0209526_10010737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6311	Open in IMG/M
3300031446\|Ga0170820_16965853	Not Available	637	Open in IMG/M
3300031561\|Ga0318528_10089813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1602	Open in IMG/M
3300031572\|Ga0318515_10767321	Not Available	509	Open in IMG/M
3300031573\|Ga0310915_10011231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5204	Open in IMG/M
3300031573\|Ga0310915_10024259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3723	Open in IMG/M
3300031679\|Ga0318561_10320680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	848	Open in IMG/M
3300031719\|Ga0306917_10374053	Not Available	1110	Open in IMG/M
3300031719\|Ga0306917_10921450	Not Available	683	Open in IMG/M
3300031744\|Ga0306918_10026005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3628	Open in IMG/M
3300031744\|Ga0306918_10105007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2018	Open in IMG/M
3300031768\|Ga0318509_10193986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1128	Open in IMG/M
3300031771\|Ga0318546_10432048	Not Available	921	Open in IMG/M
3300031777\|Ga0318543_10559020	Not Available	513	Open in IMG/M
3300031779\|Ga0318566_10572626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	551	Open in IMG/M
3300031780\|Ga0318508_1241564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	519	Open in IMG/M
3300031781\|Ga0318547_10888701	Not Available	556	Open in IMG/M
3300031833\|Ga0310917_10139876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1590	Open in IMG/M
3300031879\|Ga0306919_10375740	Not Available	1088	Open in IMG/M
3300031880\|Ga0318544_10123644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M
3300031890\|Ga0306925_10051393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4298	Open in IMG/M
3300031896\|Ga0318551_10772957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300031897\|Ga0318520_10233558	Not Available	1093	Open in IMG/M
3300031910\|Ga0306923_10379391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1610	Open in IMG/M
3300031910\|Ga0306923_11715429	Not Available	648	Open in IMG/M
3300031910\|Ga0306923_12507487	Not Available	508	Open in IMG/M
3300031912\|Ga0306921_11037217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	923	Open in IMG/M
3300031912\|Ga0306921_11206225	Not Available	842	Open in IMG/M
3300031941\|Ga0310912_10122233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1940	Open in IMG/M
3300031941\|Ga0310912_10862068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300031945\|Ga0310913_10211648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1356	Open in IMG/M
3300031947\|Ga0310909_10379869	Not Available	1186	Open in IMG/M
3300031947\|Ga0310909_10471067	Not Available	1054	Open in IMG/M
3300031954\|Ga0306926_10618616	Not Available	1321	Open in IMG/M
3300031954\|Ga0306926_10768681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1163	Open in IMG/M
3300031981\|Ga0318531_10051011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1757	Open in IMG/M
3300032001\|Ga0306922_10876754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	933	Open in IMG/M
3300032025\|Ga0318507_10428188	Not Available	576	Open in IMG/M
3300032041\|Ga0318549_10265167	Not Available	773	Open in IMG/M
3300032043\|Ga0318556_10617608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	565	Open in IMG/M
3300032044\|Ga0318558_10530355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300032059\|Ga0318533_10248962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1282	Open in IMG/M
3300032066\|Ga0318514_10737095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	524	Open in IMG/M
3300032076\|Ga0306924_10155235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2621	Open in IMG/M
3300032076\|Ga0306924_10837470	Not Available	1022	Open in IMG/M
3300032090\|Ga0318518_10431728	Not Available	675	Open in IMG/M
3300032091\|Ga0318577_10064826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1663	Open in IMG/M
3300032094\|Ga0318540_10341433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	723	Open in IMG/M
3300032180\|Ga0307471_102304107	All Organisms → cellular organisms → Bacteria → Proteobacteria	679	Open in IMG/M
3300032261\|Ga0306920_100797234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1387	Open in IMG/M
3300033289\|Ga0310914_10025945	All Organisms → cellular organisms → Bacteria	4612	Open in IMG/M
3300033289\|Ga0310914_10330281	Not Available	1377	Open in IMG/M
3300033290\|Ga0318519_10106252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1518	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.72%
Host-Associated	Host-Associated	1.28%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.72%
Plants	Host-Associated → Plants	1.28%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.28%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.56%
Loam	Environmental → Terrestrial → Soil → Loam	21.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.28%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	43.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.28%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.03%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.28%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.28%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.64%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.64%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.64%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100215194	3300000597	Forest Soil	VDNPQELLKIAQQHCQAILTIIDQLTENKSNTELRLLSQK
JGI10214J12806_118551201	3300000891	Soil	MVDPQELLNTARHHCQAIQTIIDQLTETKSDTELRLLSQRLQRLAFHA
JGI10216J12902_1176315002	3300000956	Soil	MNDPQELLNTARRHCEAIQAIIDQLTETKSNTELRRLSQRLQRLAFHAAPRREVGLADPTA*
JGI12630J15595_100050168	3300001545	Forest Soil	MTVGSVYGGATMDDPQELLNTARHHCQAIQTIIDQLTETKSNTELRLLSQTLQRLAFHAAPRSGDG*
JGI12627J18819_101422053	3300001867	Forest Soil	MVDPQELLNTARHHCQAIQTIIDQLTETKSDTELRLLSQRLQRLAFHAAPPSRAVEKVRTR*
JGI12627J18819_103490071	3300001867	Forest Soil	VGSVNEGANIDDPQELLNIARHHCQAIQTIIDQLTETKSNTELRLLSQRLQRLAFHAAPRSRDG*
JGIcombinedJ26739_1013791782	3300002245	Forest Soil	MTVGSVYGGATMDDPQEXLNXARHHCQAIQTIIDQLTETKSNTELRLLSQTLQRLAFHAAPRSGDG*
Ga0066395_103397061	3300004633	Tropical Forest Soil	PAVKREAEEEEQKAMTVGSVDGADMDDPQELLKTAQHHCQAILAIIDQLTENKSNTELRLLSQRLQRLAFHAAPRSRDG*
Ga0066869_100763322	3300005165	Soil	MVDPQELLNTARHHCQAIQTIIDQLTEIKSDTELRLLSQRLQRLAFHAAPPSRADEKVRTR*
Ga0066680_102681761	3300005174	Soil	RLEQKAMTVGSVYGGADMDDPQELLKIAQHHCQAILTIIDQLTEKKSKTELRLLSQRLQRLAFHAAPTSRDG*
Ga0066678_101514082	3300005181	Soil	MDDPQELLNTARRHCQAIQTIIDQLTETKSNTELRLLSQNLQRLAFHAAPRSRDG*
Ga0066676_110130552	3300005186	Soil	MDDPQELLNTARRHCQAIQTIIDQLTETKSNTELRLLSQSLQRLAFHAAPRSRDG*
Ga0066675_104846053	3300005187	Soil	MTVGATMDDPQELLNTARRHCQAIQTIIDQLTETKSNTELRLLSQSLQRLAFHAAPRSRDG*
Ga0066388_1029069412	3300005332	Tropical Forest Soil	LEQKEMTVGSAYEAANVDCPQELLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPSTRDG*
Ga0066388_1051848051	3300005332	Tropical Forest Soil	MDDPQELLNTARHHCEAIQTIIDQLTEAKSNTELRLLSQTLQRLAFHAAPRSRDG*
Ga0070714_1008281931	3300005435	Agricultural Soil	MEQKAMTVGSVYGGADMDDPQELLKIAQHHCQAILTIIDQLTEKKSKTELRLLSQRLQRLAFHAAPTSRDG*
Ga0070705_1008663412	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTVGSAYEGANVDGPQELLNIARHHCQAIQTIIDQLTETKSDTELRLLSQRLQRLAFHAAPPSRAVEKVRTR*
Ga0070706_1000419292	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MEQKAMTVGSVYGGADMDDPQELLKIAQHHCQAILTVIDQLTEKKSKTELRLLSQRLQRLAFHAAPRSRDG*
Ga0070706_1002810123	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTVGSVYEGADMDDPQELLKIAQHHCQAILTIIDQLTEKKSKTELRLLSQRLQRLAFHAAPTSRDG*
Ga0070707_1002600781	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MVDPQELLNTARHHCQAIQTIIDQLTETKSDTELRLLSQRLQRLAFHAAPPSRAVEKVSTR*
Ga0070698_1008428622	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MDDPQELLNTAQHHCQAIQIIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRRRDD*
Ga0070698_1014662451	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTVGSVYEGADMDDPQELLKIAQHHCQAILTIIDQLTEKKSKTELRLLSQRLQRLAFHAAPRSRDG*CSIKESPGFS
Ga0070699_1003230413	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTVGATMDDPQELLNTAQQHCQAIQTIIDQLTETKSNTELRLLSQRLQRLAFHAAPRSGGG*
Ga0070697_1000935341	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	NIARHHCQAIQTIIDQLTENKSNTELRLLSQRLQRLAFHAAPRTRDG*
Ga0066701_107525122	3300005552	Soil	EAEEDWGKEMLFGATMDDPQELLNTARRHCQAIQTIIDQLTETKSNTELRLLSQRLQRLAFHAAPRSRDG*
Ga0066661_105502262	3300005554	Soil	MDDPQELLNTARRHCQAIQTIIDQLTETKSNTELRLLSQRLQRLAFHAAPR
Ga0066700_106672002	3300005559	Soil	LGQKEMTVGATMDDPQELLNTARRHCQAIQTIIDQLTETKSNTELRLLSQSLQRLAFHAAPRSRDG*
Ga0066699_107012861	3300005561	Soil	MDHPQELLNTARRHCQAIQTIIDQLTETKSNTELRLLSQSLQRLAFHAAPRSRDG*
Ga0066706_103827161	3300005598	Soil	PQELLNTARRHCQAIQTIIDQLTETKSNTELRLLSQSLQRLAFHAAPRSRDG*
Ga0066903_1000724828	3300005764	Tropical Forest Soil	MDDPQELLKTAQHHCQAILAIIDQLTENKSNTELRLLSQRLQRLAFHAAPRSRDG*
Ga0066903_1005258923	3300005764	Tropical Forest Soil	MTAGGAAMDDPQELLNTAQRHCQAIQAIIDKLTETKSNTELRLLSQRLQRLAFHAAPRSGDG*
Ga0066903_1006584072	3300005764	Tropical Forest Soil	MTVGSVYGRATMDDPQELLNTARHYCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPTSRDD*
Ga0066903_1014582192	3300005764	Tropical Forest Soil	MTVDSVYDGADVDDPQEQLKIAQHHCQVILTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRSRDG*
Ga0066903_1022131982	3300005764	Tropical Forest Soil	MTVGSVYGGATMDDPQELLNTARHYCQAIQTIIDQLTEAKSNTELRLLSQTLQRLAFHAAPRSRDG*
Ga0066903_1022222922	3300005764	Tropical Forest Soil	PHTGRVGSVYGGATMDDPQELLNTARHHCQAIQTIIDQLTETKSNTELRLLSQTLQRLAFHAAPRSGDG*
Ga0066903_1022941663	3300005764	Tropical Forest Soil	MDDPQELLNTARHHCQAIQTIIDQLTENKSNTELRLLSQTLQRLAFHAAPSRDG*
Ga0066903_1023310892	3300005764	Tropical Forest Soil	LEQKEMTVGSANVDDPQELLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRSRDD*
Ga0070717_100863691	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	KIAQHHCQAILTIIDQLTEKKSKTELRLLSQRLQRLAFHAAPRSRDG*
Ga0070717_111654381	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LLKIAQHHCQAILTIIDQLTEKKSKTELRLLSQRLQRLAFHAAPTSRDG*
Ga0070717_119777402	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MVDPQELLNTARHHCQAIQTIIDQLTETKSDTELRLLSQRLQRLAFHAAPPSRAVEKANEIGT
Ga0079222_117875031	3300006755	Agricultural Soil	MVDPQELLNTARHHCQAIQTIIDQLTLTKSDTELRLLSQRLQRLAFHAAPPS
Ga0066653_104562512	3300006791	Soil	MDDPQELLNTAQHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPSSRDG*
Ga0066658_104496572	3300006794	Soil	MDDAQEPLNTARRHCQAIQTIIDQLTETKSNTELRLLSQSLQRLAFHAAPRSRDE*
Ga0066660_111175811	3300006800	Soil	MDDPQELLNTARRHCQAIQTIIDQLTETKSNTELRLLSQSLQHLAFHAAPRSRDG*
Ga0075428_1023373641	3300006844	Populus Rhizosphere	LEQKEMTVGATMDDPQELLNTARHHCQAIQTIIDQLTETKSDTELRLLSQRLQRLAFHAAPPSRAVEKVRTR*
Ga0075423_111525371	3300009162	Populus Rhizosphere	LEQKAMTVGFVYEGADMDDPQELLNIAQHHCQAILTIIDELTKNKSNTELRLLSQRLQRLAFHAAPRSGDG*
Ga0126380_115244701	3300010043	Tropical Forest Soil	MTVGSANVDDPQELLNIARHHCQAIQTIIDRLTENKSNTELRLLSQRLQRLAFHAAPRSRDG*
Ga0134070_103460791	3300010301	Grasslands Soil	MTVSAYEGANVDAPQELLNAAQHHCQAIQTIIDRLTENKSNTELRLLSQRLQRLAFHAAPRSRDG*
Ga0126370_123930082	3300010358	Tropical Forest Soil	VYGRATMDDPQELLNTARHYCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPTSRDD*
Ga0126376_116857622	3300010359	Tropical Forest Soil	MDDPQELLNTAQHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRRRDD*
Ga0126372_102713371	3300010360	Tropical Forest Soil	MTVGSVYGRATMDDPQELLNTARHYCQAIQTIIDQLTEAKSNTELRLLSQTLQRLAFHAAPRSRDG*
Ga0126378_129838541	3300010361	Tropical Forest Soil	MTAGGAAMDDPQELLNTAQRHCQAIQAIIDKLTETKSNTELRLLSPR
Ga0126377_127297781	3300010362	Tropical Forest Soil	NVDDPQELLNIARHHCQAIQTIIDRLTENKSNTELRLLSQRLQRLAFHAAPRSRDG*
Ga0134125_108510252	3300010371	Terrestrial Soil	MTVDLGANIDDPQELLNIAQHHCQAILTIIDRLTENKSNTELRLLSQRLQRLAFHAAPRSGDG*
Ga0126383_107294772	3300010398	Tropical Forest Soil	MTVGSANLDDPQELPNIARHHCQTIQTIIDQLTEIKSNTELRLLSQRLQRLAFHATPRGRDG*
Ga0137383_105159882	3300012199	Vadose Zone Soil	MTVGATIMDDPQELLNTARQHCQAIQTIIDQLTETKSNTELRLLSQRLQRLAFHAAPRSGGG*
Ga0137365_100805784	3300012201	Vadose Zone Soil	MTVGATMDDPQELLNTARHHCQAIQTIIDPLTETKSNTELRLLSRRLQRLAFHAAPSSGDGR*
Ga0137362_100506882	3300012205	Vadose Zone Soil	MTVVSVYEGADMDDPQELLKIAEHHCQSILTIIDQLTENKSNTELRLLSQRLQRLAFHAAPRSRDG*
Ga0137362_115744411	3300012205	Vadose Zone Soil	MTVGSAYEGANVDGPQELLNMARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRSRDG
Ga0137380_110523362	3300012206	Vadose Zone Soil	MKNSAALAVTREAEEDWEQKEMTVGSVYGCATMDDPQELLNTARRYCQAIQTIIDQLTETKSNTELRLLSQRLQRLAFHAAPRSGDG*
Ga0137379_113611832	3300012209	Vadose Zone Soil	MTVGATMDDPQELLNTARRYCQAIQTIIDQLTETKSNTELRLLSQRLQRLAFHAAPRSGDG*
Ga0137378_111785802	3300012210	Vadose Zone Soil	LEQKEMTVGATMDDPQELLNTARHHCQAIQTIIDQLTETKSNTELRLLSRRLQRLAFHAAPSSGDGR*
Ga0137377_104494401	3300012211	Vadose Zone Soil	EMTVGATIMDDPQELLNTARQHCQAIQTIIDQLTETKSNTELRLLSQRLQRLAFHAAPRSSDG*
Ga0137372_101045394	3300012350	Vadose Zone Soil	MTVGATMDDPQELLNTARHHCQAIQTIIDQLTETKSNTELRLLSRRLQRLAFHAAPSSGDGR*
Ga0137367_102263372	3300012353	Vadose Zone Soil	LAQNEESGCSGRDTGGRGGLEQKEMTVGATMDDPQELLNTARHHCQAIQTIIDQLTETKSNTELRLLSRRLQRLAFHAAPSSGDGR*
Ga0137366_100845902	3300012354	Vadose Zone Soil	MTVGATMDDPQELLNTARRHCQAIQTIIDQLTETKSNIELRLLSQRLQRLAFHAAPRSGDG*
Ga0137366_108114181	3300012354	Vadose Zone Soil	EQKEMTVGATMDDPQELLNTARHHCQAIQTIIDQLTETKSNTELRLLSRRLQRLAFHAAPSSGDGR*
Ga0137371_103856732	3300012356	Vadose Zone Soil	MTVGATMDDPQELLNTARRHCQAIQTIIDQLTETKSNTELRLLSQRLQRLAFHAAPRSGDG*
Ga0137384_103740861	3300012357	Vadose Zone Soil	KMKNSAALAVTREAEEDWEQKEMTVGSVYGCATMDDPQELLNTARRHCQAIQTIIDQLTETKSNTELRLLSQRLQRLAFHAAPRSGDG*
Ga0137384_104766381	3300012357	Vadose Zone Soil	LAQNEEPGCSGRDTGGRGGLEQKELTVGATMDDPQELLNTARHHCQAIQTIIDQLTETKSNTELRLLSRRLQRLAFHAAPSSGDGR*
Ga0137385_103260021	3300012359	Vadose Zone Soil	SGHDTGGRGGLEQKEMTVGATMDDPQELLNTARHHCQAIQTIIDQLTETKSNTELRLLSRRLQRLAFHAAPSSGDGR*
Ga0137360_114877163	3300012361	Vadose Zone Soil	RDTGGRGGLEQKEMTVGATMDDPQELLNTAQHHCQAIQTIIDQLTENKSNTELRLLSQRLQRLAFHAAPRSGDG*
Ga0137373_110728442	3300012532	Vadose Zone Soil	WSDANDFALPFRPLARLAQNEEPGCSGRDTGGRGGLEQKEMTVGATMDDPQELLNTARHHCQAIQTIIDQLTETKSNTELRLLSRRLQRLAFHAAPSSGDGR*
Ga0137395_110544841	3300012917	Vadose Zone Soil	MTVDATMDDPQELLNTARRHCQAIQTIIDQLTETKSNTELRLLSQMLQRLAFHAAPPSRAVVEEE*
Ga0137407_111109703	3300012930	Vadose Zone Soil	LEQKEMTVGATMDDPQELLNTARHHCQAIQTIIDELTETKSNTELRLLSRRLQRLAFHAAPS
Ga0126375_103581234	3300012948	Tropical Forest Soil	ISPCEAPHTGRVGSVYGGATMDDPQELLNTARHHCQAIQTIIDQLTETKSNTELRLLSQTLQRLAFHAAPRSRDG*
Ga0126375_115322601	3300012948	Tropical Forest Soil	MGQKEMTVGSANVDDPQELLNIARHHCQAIQTIIDQLSEIKSNTELRLLSQRLQRSPASLYRGSK*
Ga0134110_100829364	3300012975	Grasslands Soil	MEDPQELLNTARRHCQAIQTIIDQLTETKSNTELRLLSQSLQRLAFHAAPRSRDG*
Ga0164305_102426473	3300012989	Soil	MVDPQELLNTARHHCQAIQTIIDQLTETKSDTELRLLSQRLQRLAFHAAPPRRAVAKVRTR*
Ga0164305_105745134	3300012989	Soil	MNDPQELLNTAWGHCQTIQTIIDKLTETESNSELRLLSQRLQRLAFHAAPPRRAVEKVRAK*
Ga0182033_116123721	3300016319	Soil	RSGGRLEQKQMTVGSANVDDPQELLNIARHHCQAIQTIIDRLTEVKSNTELRLLSQRLQRLAFHAAPRGRDG
Ga0182035_109741832	3300016341	Soil	MVDPQELLNTARHHCQAIQTIIDQLTETKSDTELRLLSQRLQRLAFHAAPPSRAVEKVRT
Ga0182032_114231802	3300016357	Soil	MTAGGAAMDDPQELLNTAQRHCQAIQAVIDKLTETKSNTELRLLSQRLQRLAFHAAPRGRDG
Ga0182032_120106521	3300016357	Soil	IARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRSRDG
Ga0182040_104256251	3300016387	Soil	MDDPQELLKAAQHHCQAILVIIAQLTENKSDTELRLLSQR
Ga0182037_108507181	3300016404	Soil	MTVGSAYEGANVDDPQELLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQR
Ga0182037_109428912	3300016404	Soil	MTVESAYEGANVDDPQELLNIARHHCQAIQTIIDQLTEIKSSTELRLLSQRLQRLAFHAAPTSRDG
Ga0182039_104304991	3300016422	Soil	ESAYEGANVDDPQELLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRSRDG
Ga0066662_105614322	3300018468	Grasslands Soil	MTVGATIMDDPQELLNTARQHCQAIQTIIDQLTETKSNTELRLLSQSLQRLAFHAAPRSRDG
Ga0210406_103127722	3300021168	Soil	MDGPQELLNTARHDCQAIQTIIDQLTETKSNTELRLLSQTLQRLAFHAAPRSRDR
Ga0210406_113613031	3300021168	Soil	SFYGGATMVDPQELLNTARHHCQAIQTIIDQLTETKSDTELRLLSQRLQRLAFHAAPPSRAVEKVSTR
Ga0210408_104052583	3300021178	Soil	MVDPQELLNTARHHCQAIQTIIDQLTETKSDTELRLLSQRLQRLAFHAAPPMS
Ga0210408_110016441	3300021178	Soil	VDNPQELLKFTRHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAR
Ga0213877_102281331	3300021372	Bulk Soil	MTVGSVYGGATMDDPQELLNTARHHCQAIQTIIDQLAETKSNSELRLLSQTLQRLAFHAAPRSGDG
Ga0210384_103025781	3300021432	Soil	LNTARHHCQAIQTIIDQLTETKSNTELRLLSQTLQRLAFHAAPRSGDG
Ga0210384_114265022	3300021432	Soil	MTVGFVYEGADMDDPQELLNVAQHHCQAILTIIDQLTKNKSNTELRLLSQRLQRLAF
Ga0210409_106507042	3300021559	Soil	MDGPQELLNTARHDCQAIQTIIDQLTETKSDTELRLLSQRLQRLAFHAAPPSRAVEKVR
Ga0207684_100492504	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MEQKAMTVGSVYGGADMDDPQELLKIAQHHCQAILTVIDQLTEKKSKTELRLLSQRLQRLAFHAAPRSRDG
Ga0207684_100704764	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTVGSVYEGADMDDPQELLKIAQHHCQAILTIIDQLTEKKSKTELRLLSQRLQRLAFHAAPTSRDG
Ga0207700_109218191	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTVGSVYGGADMDDPQELLKIAQHHCQAILTIIDQLTKNKSNTELRLLSQRLQRLAFHAAPRSRDG
Ga0207700_114483722	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MDDPQELLNTAQHHCQAIQIIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRRRDD
Ga0209161_102582912	3300026548	Soil	MTVGSVYGGADMDDPQELLKIAQHHCQAILTIIDQLTEKKSKTELRLLSQRLQRLAFHAAPSSRDG
Ga0209003_10860241	3300027576	Forest Soil	MEQKAMTVGSVYGGADMDDPQELLKIAQHHCQAILTIIDQLTEKKSKTELRLLSQRLQRLAFHAAPRSRDG
Ga0209526_100107371	3300028047	Forest Soil	MTVGSVYGGATMDDPQELLNTARHHCQAIQTIIDQLTETKSNTELRLLSQTLQRLAFHAAPRSGDG
Ga0170820_169658532	3300031446	Forest Soil	MDDPQELLNTAQHHCQAIQTIIDQLTENKWNTELRLLSQRLQRLAFHAAPRSRDG
Ga0318528_100898131	3300031561	Soil	MTVESAYEGANADDPQKLLNIARHHCQAIQTIIDQLTEIKSSTELRLLSQRLQRLAFHAAPTSRDG
Ga0318515_107673211	3300031572	Soil	MTVDSAYEGANVDDPQELINIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRSRDG
Ga0310915_100112317	3300031573	Soil	MTVGSVYGGATRDDPQELLNTARHHCQVIQTIIDQLTETKSNTELRLLSQTLQRLAFHAAPRSGDG
Ga0310915_100242592	3300031573	Soil	MVTANVDDPQELLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRSRDG
Ga0318561_103206802	3300031679	Soil	MTVESAYEGANVDDPQELLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRSRDD
Ga0306917_103740533	3300031719	Soil	MDDPQELLKIAQHHCQAILTIIDRLTENKSNTELRLLSQRLQRLAFHAAPTRRNG
Ga0306917_109214501	3300031719	Soil	AQHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRSRDG
Ga0306918_100260057	3300031744	Soil	KTAQHHCQAILAIIDQLTENKSNTELRLLSQRLQRLAFHAAPRSRDG
Ga0306918_101050072	3300031744	Soil	MTVDSAYEGANVDDPQELINIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPPSGAVEKVRGTK
Ga0318509_101939862	3300031768	Soil	GGLEQKEMTVGSVYGGATRDDPQELLNTARHHCQVIQTIIDQLTETKSNTELRLLSQTLQRLAFHAAPRSGDG
Ga0318546_104320481	3300031771	Soil	GANVDDPQELLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRSRDG
Ga0318543_105590201	3300031777	Soil	MTVGSAYEGANVDDPQELLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPSSRDG
Ga0318566_105726261	3300031779	Soil	MTVESAYEGANADDPQKLLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRSRDG
Ga0318508_12415641	3300031780	Soil	MTVESAYEGANADDPQKLLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPPSGAVEKVRGTK
Ga0318547_108887011	3300031781	Soil	NIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRSRDG
Ga0310917_101398762	3300031833	Soil	MTVDSAYEGANVDDPQELLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPPSGAVEKVRGTK
Ga0306919_103757401	3300031879	Soil	IAQHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRSRDG
Ga0318544_101236441	3300031880	Soil	TRDDPQELLNTARHHCQVIQTIIDQLTETKSNTELRLLSQTLQRLAFHAAPRSGDG
Ga0306925_100513936	3300031890	Soil	MTVGSANVDDPQELLNIAQHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRSRDG
Ga0318551_107729572	3300031896	Soil	MDDPQELLKTAQHHCQAILTIIDRLTENKSNTELRLLSQRLQRLAFHAAPTRRNG
Ga0318520_102335581	3300031897	Soil	VYGGATRDDPQELLNTARHHCQVIQTIIDQLTETKSNTELRLLSQTLQRLAFHAAPRSGD
Ga0306923_103793912	3300031910	Soil	TVGSAYEGANVDDPQELLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPPSGAVEKVRGTK
Ga0306923_117154292	3300031910	Soil	AYEGANVDDPQELLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRSRD
Ga0306923_125074872	3300031910	Soil	MTVGSANVDDPQELLNIARHHCQAIQTIIDRLTEVKSNTELRLLSQRLQRLAFHAAPRGRDG
Ga0306921_110372171	3300031912	Soil	MTAGGAAMDDPQELLNTAQRHCQAIQAVIDKLTETKSNTELRLLPQRLQRLAFQAAPRSGDG
Ga0306921_112062251	3300031912	Soil	NVDDPQELLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRSRDD
Ga0310912_101222331	3300031941	Soil	TVESAYEGANADDPQKLLNIARHHCQAIQTIIDQLTEIKSSTELRLLSQRLQRLAFHAAPTSRDG
Ga0310912_108620681	3300031941	Soil	MTVGSAYEGANVDNPQELLKFARHHCQAIQTIIDQLTEIKSNAELRLLSQRLQRLEPIREVL
Ga0310913_102116482	3300031945	Soil	LEQKEMTVGSANVDDPQELLNIAQHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRSRDG
Ga0310909_103798691	3300031947	Soil	LNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRSRDG
Ga0310909_104710671	3300031947	Soil	MDGPRELLNTARHHCQAIQTIVDQLTETKSNTELRLLSQTLQRL
Ga0306926_106186162	3300031954	Soil	QKQMTVGSANVDDPQELLNIARHHCQAIQTIIDRLTEVKSNTELRLLSQRLQRLAFHAAPRGRDG
Ga0306926_107686811	3300031954	Soil	GRGGLEQKEMTVESAYEGANVDDPQELLNIARHHCQAIQTIIDQLTEIKSSTELRLLSQRLQRLAFHAAPTSRDG
Ga0318531_100510112	3300031981	Soil	MVTANVDDPQELLNIARHHCQAIQTIIDQLTEIKSSTELRLLSQRLQRLAFHAALTSRDG
Ga0306922_108767542	3300032001	Soil	MTVESAYEGANVDDPQELLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPTSRDG
Ga0318507_104281882	3300032025	Soil	SSGGLEQKEMTVGSVYGGATRDDPQELLNTARHHCQVIQTIIDQLTETKSNTELRLLSQTLQRLAFHAAPRSGDG
Ga0318549_102651671	3300032041	Soil	EMTVGSAYEGANVDDPQELLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPSSRDG
Ga0318556_106176082	3300032043	Soil	NVDDPQELLNIARHHCQAIQTIIDQLTEIKSSTELRLLSQRLQRLAFHAAPTSRDG
Ga0318558_105303551	3300032044	Soil	LLKTAQHHCQAILAIIDQLTENKSNTELRLLSQRLQRLAFHAAPRSRDG
Ga0318533_102489621	3300032059	Soil	MTVGSANVDDPQELLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPPSGAVEKVRGTK
Ga0318514_107370952	3300032066	Soil	MTVGSANVDDPQELLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRSRDG
Ga0306924_101552351	3300032076	Soil	GSAYEGANVDDPQELLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPPSGAVEKVRGTK
Ga0306924_108374701	3300032076	Soil	VDDPQELLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRL
Ga0318518_104317281	3300032090	Soil	MTVDSAYEGANVDDPQELLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPRSRDG
Ga0318577_100648261	3300032091	Soil	MDDPQELLKTAQHHCQAILAIIDQLTENKSNTELRLLSQRLQRLAFH
Ga0318540_103414332	3300032094	Soil	LNIARHHCQAIQTIIDQLTEIKSSTELRLLSQRLQRLAFHAAPTSRDG
Ga0307471_1023041071	3300032180	Hardwood Forest Soil	MVDPQELLNTARHHCQAIQTIIDQLTETKSDTEQRLLSQRLQRLAFHAA
Ga0306920_1007972342	3300032261	Soil	MVDPQELLNTARHHCQAIQTIIDQLTETKSDTELRLLWLQRLAFHAAPPSRAVEKVRTR
Ga0310914_100259452	3300033289	Soil	MTVGSAYEGANVDDPQELLNIARHHCQAIQTIIDQLTEIKSNTELRLLSQRLQRLAFHAAPPSGAVEKVRGTK
Ga0310914_103302813	3300033289	Soil	DDPQELLKIAQHHCQAILTIIDRLTENKSNTELRLLSQRLQRLAFHAAPTRRNG
Ga0318519_101062521	3300033290	Soil	MDDPQELLKTAQHHCQAILAIIDQLTENKSNTELRLLSQRLQRLAFHAAPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F043330

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences