Metagenome / Metatranscriptome Family F043334

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F043334
Family Type	Metagenome / Metatranscriptome
Number of Sequences	156
Average Sequence Length	57 residues
Representative Sequence	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVTTR
Number of Associated Samples	97
Number of Associated Scaffolds	156

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	97.10 %
% of genes near scaffold ends (potentially truncated)	76.28 %
% of genes from short scaffolds (< 2000 bps)	76.92 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.308 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.333 % of family members)
Environment Ontology (ENVO)	Unclassified (55.769 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.128 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 21.82% β-sheet: 34.55% Coil/Unstructured: 43.64%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 156 Family Scaffolds
PF04392	ABC_sub_bind	3.85
PF02518	HATPase_c	3.85
PF00330	Aconitase	3.21
PF08734	GYD	1.92
PF02657	SufE	1.92
PF01068	DNA_ligase_A_M	1.92
PF06186	DUF992	0.64
PF03797	Autotransporter	0.64
PF08281	Sigma70_r4_2	0.64
PF01475	FUR	0.64
PF06411	HdeA	0.64
PF13565	HTH_32	0.64
PF07045	DUF1330	0.64
PF06718	DUF1203	0.64
PF14559	TPR_19	0.64
PF02954	HTH_8	0.64
PF06348	DUF1059	0.64
PF05048	NosD	0.64
PF00512	HisKA	0.64
PF07508	Recombinase	0.64
PF01527	HTH_Tnp_1	0.64

COG ID	Name	Functional Category	% Frequency in 156 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.85
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	1.92
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.92
COG2166	Sulfur transfer protein SufE, Fe-S cluster assembly	Posttranslational modification, protein turnover, chaperones [O]	1.92
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	1.92
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	0.64
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.64
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
All Organisms	root	All Organisms	32.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
cellular organisms	root	All Organisms → cellular organisms	32.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.05 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30.13 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.64 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	19.23 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.41 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.64 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	12.18 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.41 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.64 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.41 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.64 %
Escherichia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	0.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.41 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.56 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1.28 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.64 %
Bradyrhizobium guangxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangxiense	0.64 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.64 %
Bradyrhizobium australiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium australiense	0.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.41 %
Bradyrhizobium sp. cir1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. cir1	2.56 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1.28 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.64 %
Bradyrhizobium guangxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangxiense	0.64 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.64 %
Bradyrhizobium australiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium australiense	0.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000787\|JGI11643J11755_11743210	Not Available	592	Open in IMG/M
3300000956\|JGI10216J12902_117258567	Not Available	515	Open in IMG/M
3300001641\|JGI20238J16299_102798	Not Available	548	Open in IMG/M
3300005175\|Ga0066673_10420662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	783	Open in IMG/M
3300005332\|Ga0066388_103649337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	786	Open in IMG/M
3300005332\|Ga0066388_104206393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	734	Open in IMG/M
3300005332\|Ga0066388_104719849	Not Available	693	Open in IMG/M
3300005436\|Ga0070713_101125867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	759	Open in IMG/M
3300005576\|Ga0066708_10376906	Not Available	911	Open in IMG/M
3300005764\|Ga0066903_100470638	All Organisms → cellular organisms → Bacteria → Proteobacteria	2112	Open in IMG/M
3300005764\|Ga0066903_102896859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	930	Open in IMG/M
3300005764\|Ga0066903_103054231	Not Available	906	Open in IMG/M
3300005764\|Ga0066903_103223283	Not Available	882	Open in IMG/M
3300005764\|Ga0066903_107534613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium australiense	561	Open in IMG/M
3300006755\|Ga0079222_10901833	Not Available	742	Open in IMG/M
3300006755\|Ga0079222_10992632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	720	Open in IMG/M
3300006854\|Ga0075425_101447435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	777	Open in IMG/M
3300006854\|Ga0075425_102800210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300006871\|Ga0075434_102483329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300007076\|Ga0075435_100346058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1274	Open in IMG/M
3300007076\|Ga0075435_101765478	Not Available	543	Open in IMG/M
3300009012\|Ga0066710_104767943	Not Available	507	Open in IMG/M
3300009792\|Ga0126374_10969148	Not Available	665	Open in IMG/M
3300009792\|Ga0126374_11520065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300010047\|Ga0126382_12184629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300010376\|Ga0126381_102181391	Not Available	797	Open in IMG/M
3300010376\|Ga0126381_104542447	Not Available	535	Open in IMG/M
3300012177\|Ga0153943_1136718	Not Available	534	Open in IMG/M
3300012198\|Ga0137364_10879394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	678	Open in IMG/M
3300012208\|Ga0137376_11606338	Not Available	541	Open in IMG/M
3300012948\|Ga0126375_11244954	Not Available	622	Open in IMG/M
3300012955\|Ga0164298_11345396	Not Available	549	Open in IMG/M
3300012957\|Ga0164303_10537484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300012971\|Ga0126369_11179429	Not Available	855	Open in IMG/M
3300015372\|Ga0132256_103646653	Not Available	518	Open in IMG/M
3300015374\|Ga0132255_100882179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1337	Open in IMG/M
3300016270\|Ga0182036_10151999	Not Available	1650	Open in IMG/M
3300016294\|Ga0182041_12229516	Not Available	512	Open in IMG/M
3300016319\|Ga0182033_10117879	Not Available	1990	Open in IMG/M
3300016319\|Ga0182033_10178088	Not Available	1670	Open in IMG/M
3300016319\|Ga0182033_10192875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1614	Open in IMG/M
3300016319\|Ga0182033_11358338	Not Available	639	Open in IMG/M
3300016357\|Ga0182032_10170596	Not Available	1630	Open in IMG/M
3300016357\|Ga0182032_10391605	Not Available	1122	Open in IMG/M
3300016357\|Ga0182032_10900806	Not Available	752	Open in IMG/M
3300016357\|Ga0182032_11082199	Not Available	687	Open in IMG/M
3300016371\|Ga0182034_10501909	Not Available	1012	Open in IMG/M
3300016371\|Ga0182034_11796200	Not Available	540	Open in IMG/M
3300016371\|Ga0182034_12045687	Not Available	506	Open in IMG/M
3300016404\|Ga0182037_10458620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1061	Open in IMG/M
3300016404\|Ga0182037_11837473	Not Available	542	Open in IMG/M
3300016422\|Ga0182039_10390857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1178	Open in IMG/M
3300016445\|Ga0182038_10364091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1202	Open in IMG/M
3300016445\|Ga0182038_10777286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. cir1	838	Open in IMG/M
3300017822\|Ga0187802_10453625	Not Available	508	Open in IMG/M
3300017970\|Ga0187783_10025694	Not Available	4362	Open in IMG/M
3300017970\|Ga0187783_10342243	Not Available	1089	Open in IMG/M
3300017970\|Ga0187783_10460945	Not Available	922	Open in IMG/M
3300017970\|Ga0187783_10607989	Not Available	791	Open in IMG/M
3300017999\|Ga0187767_10150469	Not Available	696	Open in IMG/M
3300018085\|Ga0187772_10614624	Not Available	774	Open in IMG/M
3300021420\|Ga0210394_10883128	Not Available	778	Open in IMG/M
3300022533\|Ga0242662_10213398	Not Available	612	Open in IMG/M
3300025915\|Ga0207693_10257740	Not Available	1368	Open in IMG/M
3300025915\|Ga0207693_10408583	Not Available	1061	Open in IMG/M
3300025915\|Ga0207693_10579772	Not Available	874	Open in IMG/M
3300025928\|Ga0207700_11409494	Not Available	619	Open in IMG/M
3300026876\|Ga0207837_1007631	Not Available	974	Open in IMG/M
3300026959\|Ga0207852_1009275	Not Available	1087	Open in IMG/M
3300026997\|Ga0207784_1004213	Not Available	1718	Open in IMG/M
3300027703\|Ga0207862_1019562	Not Available	2020	Open in IMG/M
3300027894\|Ga0209068_10411754	Not Available	772	Open in IMG/M
3300028906\|Ga0308309_11715478	Not Available	533	Open in IMG/M
3300031544\|Ga0318534_10373212	Not Available	820	Open in IMG/M
3300031545\|Ga0318541_10403988	Not Available	763	Open in IMG/M
3300031573\|Ga0310915_10082449	Not Available	2142	Open in IMG/M
3300031573\|Ga0310915_10223053	Not Available	1322	Open in IMG/M
3300031573\|Ga0310915_10543889	Not Available	824	Open in IMG/M
3300031573\|Ga0310915_10675863	Not Available	729	Open in IMG/M
3300031640\|Ga0318555_10705128	Not Available	545	Open in IMG/M
3300031668\|Ga0318542_10039947	Not Available	2078	Open in IMG/M
3300031679\|Ga0318561_10747127	Not Available	537	Open in IMG/M
3300031681\|Ga0318572_10366308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangxiense	855	Open in IMG/M
3300031713\|Ga0318496_10234270	Not Available	1011	Open in IMG/M
3300031719\|Ga0306917_10023929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3819	Open in IMG/M
3300031719\|Ga0306917_10120984	Not Available	1907	Open in IMG/M
3300031744\|Ga0306918_11249098	Not Available	572	Open in IMG/M
3300031744\|Ga0306918_11513938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. cir1	512	Open in IMG/M
3300031751\|Ga0318494_10851728	Not Available	534	Open in IMG/M
3300031765\|Ga0318554_10325550	Not Available	874	Open in IMG/M
3300031765\|Ga0318554_10701566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	568	Open in IMG/M
3300031770\|Ga0318521_10632815	Not Available	648	Open in IMG/M
3300031771\|Ga0318546_10019080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3881	Open in IMG/M
3300031778\|Ga0318498_10181091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	957	Open in IMG/M
3300031796\|Ga0318576_10015061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2953	Open in IMG/M
3300031821\|Ga0318567_10060305	Not Available	1982	Open in IMG/M
3300031833\|Ga0310917_10061018	Not Available	2342	Open in IMG/M
3300031833\|Ga0310917_10245536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1204	Open in IMG/M
3300031833\|Ga0310917_10280737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1124	Open in IMG/M
3300031833\|Ga0310917_10329750	Not Available	1034	Open in IMG/M
3300031833\|Ga0310917_10555299	Not Available	780	Open in IMG/M
3300031835\|Ga0318517_10469436	Not Available	567	Open in IMG/M
3300031846\|Ga0318512_10098478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1372	Open in IMG/M
3300031879\|Ga0306919_10324608	Not Available	1172	Open in IMG/M
3300031879\|Ga0306919_10682631	Not Available	791	Open in IMG/M
3300031879\|Ga0306919_10758944	Not Available	746	Open in IMG/M
3300031910\|Ga0306923_10053719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4453	Open in IMG/M
3300031910\|Ga0306923_10144979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2707	Open in IMG/M
3300031910\|Ga0306923_10270690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1942	Open in IMG/M
3300031910\|Ga0306923_10471377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1422	Open in IMG/M
3300031910\|Ga0306923_10671436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. cir1	1156	Open in IMG/M
3300031912\|Ga0306921_10066423	All Organisms → cellular organisms → Bacteria → Proteobacteria	4127	Open in IMG/M
3300031912\|Ga0306921_10506535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1403	Open in IMG/M
3300031941\|Ga0310912_10107690	Not Available	2062	Open in IMG/M
3300031941\|Ga0310912_10767539	Not Available	746	Open in IMG/M
3300031942\|Ga0310916_10426123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1129	Open in IMG/M
3300031942\|Ga0310916_10785492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	802	Open in IMG/M
3300031945\|Ga0310913_10720199	Not Available	705	Open in IMG/M
3300031945\|Ga0310913_11084932	Not Available	559	Open in IMG/M
3300031946\|Ga0310910_10019346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4453	Open in IMG/M
3300031946\|Ga0310910_11274275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. cir1	568	Open in IMG/M
3300031947\|Ga0310909_11375770	Not Available	565	Open in IMG/M
3300031954\|Ga0306926_10093562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3676	Open in IMG/M
3300031954\|Ga0306926_11057626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	962	Open in IMG/M
3300031954\|Ga0306926_11345530	Not Available	831	Open in IMG/M
3300032001\|Ga0306922_11226166	Not Available	762	Open in IMG/M
3300032035\|Ga0310911_10158222	Not Available	1277	Open in IMG/M
3300032039\|Ga0318559_10200820	Not Available	917	Open in IMG/M
3300032059\|Ga0318533_10188373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1473	Open in IMG/M
3300032059\|Ga0318533_10319770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1128	Open in IMG/M
3300032059\|Ga0318533_11156748	Not Available	566	Open in IMG/M
3300032261\|Ga0306920_100114444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4001	Open in IMG/M
3300032261\|Ga0306920_101082659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1163	Open in IMG/M
3300032783\|Ga0335079_11982819	Not Available	561	Open in IMG/M
3300033289\|Ga0310914_10034225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4081	Open in IMG/M
3300033289\|Ga0310914_10128272	Not Available	2215	Open in IMG/M
3300033289\|Ga0310914_10242163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1619	Open in IMG/M
3300033290\|Ga0318519_10668998	Not Available	633	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.23%
Host-Associated	Host-Associated	5.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.31%
Plants	Host-Associated → Plants	4.49%
Aquatic	Environmental → Aquatic	1.92%
Fungi	Host-Associated → Fungi	1.28%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.85%
Freshwater	Environmental → Aquatic → Freshwater	1.28%
Mycelium	Host-Associated → Fungi → Mycelium	1.28%
Sediment	Environmental → Aquatic → Sediment	0.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.44%
Loam	Environmental → Terrestrial → Soil → Loam	15.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.21%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.28%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.28%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.64%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.64%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	60.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.21%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.56%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.28%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.28%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.28%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.64%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.13%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.28%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.28%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.28%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.28%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.64%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001641	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012177	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ027 MetaG	Host-Associated	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300022510	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026876	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 58 (SPAdes)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300026997	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 66 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J11755_117432101	3300000787	Soil	MRNLVISVLVIGLLSLLPLSPRVGPSSGLLPVSISVGQDEANAYVTYRRARVTYRRAYRRGYRRAAYYGGAY
JGI10216J12902_1172585672	3300000956	Soil	MRNLVMSVLVVGLLSLLPLSPRVAPSSGLLPVSISVGQDEA
JGI20238J16299_1027982	3300001641	Forest Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVTTRRVYR
Ga0066673_104206621	3300005175	Soil	VISVLVVGLLSLLPLSPRVNSSPGLLPVSISLGQDEAKAYVTYRRARVTTRRVYRRSYYHYY*
Ga0066388_1036493371	3300005332	Tropical Forest Soil	MRNLAISVLVIGLLSLLPLSPRVGPSSGLLPVSISVGQDEANAYVTYRRARVTSRRVYRRAY
Ga0066388_1042063931	3300005332	Tropical Forest Soil	MRNFVISVLVIGVLSLLPLSPRVSPSSGLLPVSISVSQDEANAVTYRRARVTYRRAYRRGYRRAAY
Ga0066388_1047198492	3300005332	Tropical Forest Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAY
Ga0066388_1062023221	3300005332	Tropical Forest Soil	MRNFVILVLVTGVLSLLPLSPRVGPSSGLLPVSISVGQDEANAVTYRRARVTYRRAYRRGYRRAHYGGYYAPYYRTAY
Ga0070713_1011258671	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRNLMISVLVIGLLSLLPFSPRVAPSSGLVPVSISIGGDEAKAYVTYRRAR
Ga0066708_103769062	3300005576	Soil	MRNLVMSVLVIGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYV
Ga0066903_1004706381	3300005764	Tropical Forest Soil	MGVRTMRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSVSFGQDEAKAYVTYRRARVTTRRVYRRAYR
Ga0066903_1028968591	3300005764	Tropical Forest Soil	MRNLAISVLVIGLLSLLPLSPRVGASSGLMPVSISVGQDEANAYVTYRRARVTYRRAYRRGYR
Ga0066903_1030542313	3300005764	Tropical Forest Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVTT
Ga0066903_1032232833	3300005764	Tropical Forest Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARV
Ga0066903_1047916652	3300005764	Tropical Forest Soil	MRMRNLVILALVVGLLSLLPLSPRVGPSSGLLPVSISLGQNEAKAYVTYRRARVATRRAYRRGYYGGYGYGGYYHPY*
Ga0066903_1075346133	3300005764	Tropical Forest Soil	MRNLVISVLFVGLLLLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVTT
Ga0079222_109018331	3300006755	Agricultural Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARV
Ga0079222_109926321	3300006755	Agricultural Soil	MRNLVISVLVIGLLSLLPLSPRVTPSSGLLPVSISVGQDEANAYVTYRRARVTYRRAYRR
Ga0075425_1014474351	3300006854	Populus Rhizosphere	MRNFVISVLVIGLLSLLPLSPRVGPSSGLLPVSISVGQDEANAVTYRRARVTYRRAYRRGYRR
Ga0075425_1028002101	3300006854	Populus Rhizosphere	MRNLVISVLVIGLMSLLPLSPRVAPSSGLLPVSISVGQDEANAYVTYRRAQVMDEKS*
Ga0075434_1024833291	3300006871	Populus Rhizosphere	MRNLVMSVLVIGLVSLLPLSPRVAPSSGLLPVSIS
Ga0075435_1003460581	3300007076	Populus Rhizosphere	MRNFVISVLVIGLLSLLPLSPRVGPSSGLLPVSISVGQDEANAYVTYRRARVMDEKS*
Ga0075435_1017654781	3300007076	Populus Rhizosphere	MRNFVISVLIIGLLSLLPLSPRVGLSSGLLPVSISVGQDEANAYVTYRRARVTYRRAYRRGYY*
Ga0066710_1047679432	3300009012	Grasslands Soil	MRNLVISVLVVGLLSLLPLSPRVAPSSGLLPVSISIGQDEAKAYVTYRRARVTTRR
Ga0126374_109691481	3300009792	Tropical Forest Soil	MRNLVMSVLVIGLLSLLPLSPRVAPSSGLLPVSISVGQDEANAYVTYRRARV
Ga0126374_115200651	3300009792	Tropical Forest Soil	MRNLVISVLVIGLLSLLPLSPRVGPSPGLLPVSISVGQDEANAYVTYRRA
Ga0126382_121846291	3300010047	Tropical Forest Soil	MMRNLAISVLVIGLLSLLPLSPRVGPSSGLLPVSISVGQDEANA*
Ga0126381_1021813911	3300010376	Tropical Forest Soil	MMSVLVVGLLSLLPLSPRVAPSSGLLPVSISVGQDEANAYVTYRRAQVTYRRPYRR
Ga0126381_1041132941	3300010376	Tropical Forest Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVATRRAYRRSYYGGYPGYYGGYYRRY*
Ga0126381_1045424471	3300010376	Tropical Forest Soil	MRYLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRA
Ga0153943_11367181	3300012177	Attine Ant Fungus Gardens	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVTTRRVYRRSYYH*
Ga0153922_11069361	3300012181	Attine Ant Fungus Gardens	MRNLVISGLVVGLLSIVPLSPRVGPSSGSLPVSISLGQDEAKAYVTYRRARVATRRAYRRYYRGAYHYY*
Ga0137364_108793941	3300012198	Vadose Zone Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVTTRRVYRRAYRRS
Ga0137376_116063381	3300012208	Vadose Zone Soil	MRNFVILVLVTGVLSLLPLSPRVGPSSGLLPVSISVGQDEANAVTYRRARVTYRRAYRRGYR
Ga0126375_112449541	3300012948	Tropical Forest Soil	MRNLVMSVLVIGLLSLLPLSPRVAPSSGLLPVSIFVGQDEANAYVTYRRARVTYRRAYRRGYRRAAYYGGAYYRP
Ga0164298_113453961	3300012955	Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGFLPVSISLGQD
Ga0164303_105374841	3300012957	Soil	MRNFVISVLVIGLLSLLPLSPRVGPSSGLLPVSISVGQDEANAYVTYRR
Ga0126369_111794291	3300012971	Tropical Forest Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSRLLPASISLGQDEAKAYVTYRRARVTTRRVYRRSYYY*
Ga0164305_115212001	3300012989	Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGFLPVSISLGQDEAKAYVTYRRARVATRRAYRRGYYGGYNPGYYGGYYRRY*
Ga0132256_1036466531	3300015372	Arabidopsis Rhizosphere	MISVLVIGLLSLLPLSPRVGPSSGLLPVSISVGQDEANAYVTYRRARVTYRRAYRRGYRRAYYG
Ga0132255_1008821793	3300015374	Arabidopsis Rhizosphere	MISVLVIGLLSLLPLSPRVGPSSGLLPVSISVGQDEANAYVTYRRARVTYRRAYRRGYRRAYYGGAY
Ga0182036_101519993	3300016270	Soil	MRNLVISVLVVGLLSLLPLSPRVVGPSSGLLPVSISLGQDEAKAYVTYRRARVTTRR
Ga0182041_111318861	3300016294	Soil	VGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVATRRAYRRSYYGGYGYYGGYYRRY
Ga0182041_122295161	3300016294	Soil	RTMRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGHDEAKAYVTYRRARVTRRRAYRRSYYHHY
Ga0182033_101178793	3300016319	Soil	MRNLVISVLVVGLLSLLPLSQRIGPSSGLLPLSISLGQDEAK
Ga0182033_101780883	3300016319	Soil	MRNLVISVLVVGLLSLLPLSPRVVGPSSGLLPVSISLGQDEAKAYVTYRRARVTTRRVYRRAY
Ga0182033_101928754	3300016319	Soil	MRNLVISVLVIGLLSLLPLSPRVGPSSGLLPVSISLGQDEASAYVTYRRARVTTRRVYR
Ga0182033_113583381	3300016319	Soil	MRYFVISVLLVGLLSLMPLSPRVGPSSGLLPVSISLGQNEAKAYVTYRRARVATRRAYRRCYRGSYYC
Ga0182035_115903501	3300016341	Soil	MRNLVISALVGLLSLLPLSPRVGPSSGLLPVSISLGQDQAKAYVTYRRARVATRRAYRRSYYGGYGYYGGY
Ga0182032_101705963	3300016357	Soil	MRNLVISVLVVGLLSLLPLSPRVVGPSSGLLPVSISLGQDEAKAYVTYRR
Ga0182032_103916055	3300016357	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQDE
Ga0182032_109008062	3300016357	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVTTR
Ga0182032_110821991	3300016357	Soil	MRNLVISALVGLLSLLPLSPRVGPSSGLLPVSISLG
Ga0182034_105019092	3300016371	Soil	MRNLAISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKA
Ga0182034_117962001	3300016371	Soil	MRNLVISVLVIGLLSLLPLSPRVGPSSGLLPVSISLGHDEAK
Ga0182034_120456871	3300016371	Soil	MRNLVISALVVGLLSLLPLSPRIGPSSGLLPVSISLGQDEAKAYVTYRRARVATRRAYRRSYY
Ga0182037_104586202	3300016404	Soil	MRNLVISVLVIGLLSLLPLSPRVGPSSGLLPVSISVGQDEANAYVTYRRARVTYRRAYRRGYRRA
Ga0182037_118374731	3300016404	Soil	MRNLVISALVGLLSLLPLSPRVGPSSGLLPVSISLGQDQAKAYVTYRRARVATRRAYRRSYYG
Ga0182039_103908572	3300016422	Soil	MRNLVISALVVGLLSLLPLSPRIGPSSGLLPVSISLGQDEAKAYVTYRRARVATRR
Ga0182038_103640913	3300016445	Soil	MRNLVISVLVVGPLSLLPLSPRVDSSSGLLPVSISLGQDEAKAYVTYRRARV
Ga0182038_107772861	3300016445	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQNEAKAY
Ga0187802_104536251	3300017822	Freshwater Sediment	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYR
Ga0187783_100256949	3300017970	Tropical Peatland	MRNLVISVLVVGLLSLLPLSPRVSPSSGLLPVSISLGQDEAKAYVTYRRARVATRRAYRRGYYHY
Ga0187783_103422431	3300017970	Tropical Peatland	MRNLVISALAVGLLSLLPLSPRVSPSSGLLPVSISLGQDQAKAYVTYRRARVATRRAYRRSYYHY
Ga0187783_104609452	3300017970	Tropical Peatland	MRNLVISVLVIGLLSMLRLSQRVGPSSGLLPVSISLGQDEAKAYVTYRRARVATRRAYRRAYRGSYYHY
Ga0187783_106079891	3300017970	Tropical Peatland	MRNLVISVLVVGLLSLLPLSPRVRSSSGLLPVSISLGQDEAKAYVTYRRARVATRRAYRRSYYHY
Ga0187823_100610721	3300017993	Freshwater Sediment	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVATRRAYRRSYYGGYGYYGGYYRRY
Ga0187767_101504691	3300017999	Tropical Peatland	MRNLVISVIVVALLSLLPLSPRIGPSSGLLPVSISLGQDEAKAYVTY
Ga0187772_106146241	3300018085	Tropical Peatland	MRNLVISVLVVGLLSLLPLSPRVRPSSGLLPVSISLGQDEAKAYVTYRRARVATRRAYRRSYYHY
Ga0210394_108831281	3300021420	Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVATRRA
Ga0210384_113813612	3300021432	Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVATRRAYRRSYYGGYGYYGGYNPGY
Ga0242652_10153082	3300022510	Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVATRRAYRRSYYGGYGGYYRRY
Ga0242664_10678371	3300022527	Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVATRRAYRRSYYGGYGYYGGYNP
Ga0242662_102133981	3300022533	Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVAT
Ga0207699_104455192	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MRNLVISALVVGLLSLLPLSPRVGPSSGFLPVSISLGQDEAKAYVTYRRARVATRRADRRSYYGGYNPGYYGGYYRRY
Ga0207693_102577401	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRAR
Ga0207693_104085832	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRAR
Ga0207693_105797723	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRNFVISVLVIGLLSLLPLSPRVGPSSGLLPVSISVGQDEANAYVTYR
Ga0207700_114094941	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVATRRAYRRSYYGGYNPCYCYGDY
Ga0207837_10076313	3300026876	Tropical Forest Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVTTRRVYRRAYR
Ga0207852_10092752	3300026959	Tropical Forest Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVT
Ga0207784_10042131	3300026997	Tropical Forest Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVATRRGYRRAYRHSYYHY
Ga0207777_10327952	3300027330	Tropical Forest Soil	MRNLVISVIVVALLSLLPLSPRIGPSSGLLPVSISLGQDEAKAYVTYRRARVATRRAYRRSYYGGYGYYGG
Ga0207862_10195621	3300027703	Tropical Forest Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLG
Ga0209068_104117541	3300027894	Watersheds	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVTTRRVYRR
Ga0308309_117154781	3300028906	Soil	MRNLVISALVVGLLSPLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVATRRAYRRSYY
Ga0318534_103732121	3300031544	Soil	MRNLVISVLVIGLLSLLPLSPRVGPSSGLLPVSISVGQDEANAYVTYRRARVTYRRAYRRGYRRAYYGGYYAPYY
Ga0318541_104039881	3300031545	Soil	MRMRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYR
Ga0310915_100824491	3300031573	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRA
Ga0310915_102230531	3300031573	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVTTRRVYRRAYRR
Ga0310915_105438892	3300031573	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVAT
Ga0310915_106758631	3300031573	Soil	MRNLVISVLVIGLLSLLPLSPRVGPSSGLLPVSISVGQDEANAYVTYRRARVTYRR
Ga0307483_10102941	3300031590	Hardwood Forest Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVATRRAYRRSYYGGYNPGYYGGYYRRY
Ga0318555_107051281	3300031640	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQ
Ga0318542_100399472	3300031668	Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVT
Ga0318561_107471271	3300031679	Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLG
Ga0318572_103663081	3300031681	Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSIS
Ga0318496_102342701	3300031713	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVT
Ga0306917_100239295	3300031719	Soil	MRNLVISALVVGLVSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVATR
Ga0306917_101209841	3300031719	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVATR
Ga0307469_109537392	3300031720	Hardwood Forest Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVATRRAYRRSYYGGYGYYGGYNPGYY
Ga0306918_112490981	3300031744	Soil	VISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQNEAKAYVTYRRARVATRRAYRRGYYGGYYHY
Ga0306918_115139382	3300031744	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPMSISLGQNEAKAYVTY
Ga0318494_108517281	3300031751	Soil	MRNLVISVLVIGLLSLLPLSPRVGPSSGLLPVSISVGQD
Ga0318554_103255501	3300031765	Soil	MRNLVISVLVIGLLSLLPLSPRVGPSSGLLPVSISVGQDEANAYVTYRRARVTYRRGYRRGYRRAYYGGYYAPY
Ga0318554_107015661	3300031765	Soil	VISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQNEAKAYVTSATARIQPSDVTFDRPGRRVYRRAY
Ga0318521_106328151	3300031770	Soil	MRNLVISVLVVGLLSLLPLSPRVVGPSSGLLPVSISLGQDEAKAYVTYRRA
Ga0318546_100190807	3300031771	Soil	MRMRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRAR
Ga0318498_101810911	3300031778	Soil	MRNLVISVLVIGLLSLLPLSPRVGPSSGLLPVSISVGQDEANAYVTYRRARVTYRRAYRRGYRRAYYG
Ga0318576_100150611	3300031796	Soil	MRMRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVATR
Ga0318523_104390061	3300031798	Soil	MRMRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVATRRAYRRSYYGGYGYYG
Ga0318497_100441432	3300031805	Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVATRRAYRRSYYGGYGYYGGY
Ga0318567_100603051	3300031821	Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAK
Ga0310917_100610185	3300031833	Soil	MRNLVISVLVVGLLLLLPLSPRVGPSSGLLPVSISLGHDEAKAYVTYRRARVTRRRAYRRSYYHHY
Ga0310917_102455363	3300031833	Soil	MRNLVISVLVVGPLSLLPLSPRVDSSSGLLPVSISLGQDEAKAYVTYRRARVTTRRVYR
Ga0310917_102807371	3300031833	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPMSISLGQNEA
Ga0310917_103297501	3300031833	Soil	MRNLVISVLVVGLLSLLPLSPRRGPSSGLLPVSISLG
Ga0310917_105552991	3300031833	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGHDEAKAYVTYRRARV
Ga0318517_104694361	3300031835	Soil	MRNLVISALVVGLLSLLPLSPRIGPSSGLLPVSISLGQDEAKAYVT
Ga0318512_100984782	3300031846	Soil	MRNLVISALVVGLLSLLPLSPRIGPSSGLLPVSISLGQDEAKAYVTYR
Ga0306919_103246083	3300031879	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVATRRAYRR
Ga0306919_106826311	3300031879	Soil	MRNLVISVLVIGLLSLLPLSPRVGPSSGLLPVSISLGQDEANAYVTYRRARVTTRRVYRR
Ga0306919_107589442	3300031879	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGHDEAKAYVTYRRARVTRRRAYRRSYYHHY
Ga0306923_100537193	3300031910	Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQNEAKAYVTYRRARVATRRAYRRGYYGGYYHY
Ga0306923_101449793	3300031910	Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRA
Ga0306923_102706901	3300031910	Soil	MRNLVISVLAVGLLSLLPLSPRVAPSSGLLPVSISVGQDEA
Ga0306923_104713772	3300031910	Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISL
Ga0306923_106714362	3300031910	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQNEAKAYVTYRRARVT
Ga0306921_100664234	3300031912	Soil	SALVVGLLSLLPLSPRVGPSSGLLPVSISLGQNEAKAYVTYRRARVATRRAYRRGYYGGYYHY
Ga0306921_105065354	3300031912	Soil	VRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVPISLGQDEAKAYVTYRRARV
Ga0310912_101076901	3300031941	Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYR
Ga0310912_107675391	3300031941	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGHDEAKAYVTYRRARVTRRRAYRRSYY
Ga0310916_104261231	3300031942	Soil	MRNLVISALVVGLLSLLPLSPRIGPSSGLLPVSISLGQDEAKAYVTY
Ga0310916_107854921	3300031942	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISL
Ga0310913_101993602	3300031945	Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVTYRRARVATRRAYRRSYYGGYNPGYYGGYYRR
Ga0310913_107201993	3300031945	Soil	MRNLVISVLVIGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKA
Ga0310913_110849322	3300031945	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGHDEAKAYVTYRRARVTRRRAYRRSYYHH
Ga0310910_100193461	3300031946	Soil	MRMRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQDEAKAYVT
Ga0310910_112742751	3300031946	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQNEAKAYVTYRRARVTTRRVYRRAY
Ga0310909_113757701	3300031947	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISFGQDEAKAYVTYRRARVTTRRVY
Ga0306926_100935621	3300031954	Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQNEAKAYVTYRRARVA
Ga0306926_110576261	3300031954	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGQNEAKAYVTYRRARVTTR
Ga0306926_113455301	3300031954	Soil	MRNLVISVLVVGLLSLLPLSPRRGPSSGLLPVSISLGQ
Ga0306922_112261661	3300032001	Soil	MRMRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLSQNEAKAYVTYRRARVATRRAYRRGYYGGYYHY
Ga0310911_101582222	3300032035	Soil	MRNLVISALVGLLSLLPLSPRVGPSSGLLPVSISLGQDQAKAYVTYRRARVATRRAYRRSYYGGY
Ga0318559_102008202	3300032039	Soil	MRNLVISVLVVGLLSLLPLSPRVVGPSSGLLPVSISLGQDEAK
Ga0318533_101883731	3300032059	Soil	MRMRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQNEAKAYVTYRRARVATRRAYRRGYYGGYYHY
Ga0318533_103197703	3300032059	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSMSLGQDEAKA
Ga0318533_111567482	3300032059	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGHDEAKAYVTYRRARATRRRVY
Ga0306920_1001144444	3300032261	Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQNEAKAYVTYRRARVATRRAYRRGYYG
Ga0306920_1010826592	3300032261	Soil	MRNLVISVLIIGLLSLLPLSPRVGPSSGLLPVSISVGQDEANAYVTYRRARVTYRRAYRRGYRR
Ga0335079_119828192	3300032783	Soil	MRNLVISVFVVALLSLLPLSPRVVGPSSGLLPVSISLGQD
Ga0310914_100342251	3300033289	Soil	MRNLVISVLVIGLLSLLPLSPRVGPSSGLLPVSISLGQDEASAYVTYRRARVTTRRVYRRAYR
Ga0310914_101282725	3300033289	Soil	MRNLVISVLVVGLLSLLPLSPRVGPSSGLLPVSISLGHDEAKAYVTYRRARVTTRRVY
Ga0310914_102421633	3300033289	Soil	MRNLVISALVVGLLSLLPLSPRVGPSSGLLPVSISLGQNEAKAYVTYRRARVATRRAYR
Ga0318519_106689981	3300033290	Soil	MRNLVISVLVVGLLSLLPLSPRVVGPSSGLLPVSISLGQDEAKAYV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F043334

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences