Metagenome Family F043488

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F043488
Family Type	Metagenome
Number of Sequences	156
Average Sequence Length	89 residues
Representative Sequence	MPITQAGKQFTAADLQSTAGALASVLRDISQDGLDFKTQLETWPDADLIELGLTQDEINAIKGFYVGDLPAIAAALQASTWIKQLLGTGV
Number of Associated Samples	91
Number of Associated Scaffolds	156

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	87.74 %
% of genes near scaffold ends (potentially truncated)	19.87 %
% of genes from short scaffolds (< 2000 bps)	69.23 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (66.667 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.949 % of family members)
Environment Ontology (ENVO)	Unclassified (30.769 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (35.256 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.93% β-sheet: 5.08% Coil/Unstructured: 38.98%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
e.18.1.0: automated matches	d5aa5c_	5aa5	0.60196
e.11.1.0: automated matches	d3ilwa_	3ilw	0.59524
a.8.7.1: Typo IV secretion system protein TraC	d1r8ia_	1r8i	0.58837
f.54.1.1: SNF-like	d2a65a1	2a65	0.58266
f.5.1.1: Outer membrane efflux proteins (OEP)	d1ek9a_	1ek9	0.58261

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 156 Family Scaffolds
PF00589	Phage_integrase	3.21
PF13560	HTH_31	2.56
PF01555	N6_N4_Mtase	1.92
PF05521	Phage_H_T_join	1.92
PF05119	Terminase_4	1.28
PF03354	TerL_ATPase	1.28
PF09588	YqaJ	1.28
PF00989	PAS	0.64
PF00106	adh_short	0.64
PF13392	HNH_3	0.64
PF00386	C1q	0.64
PF00041	fn3	0.64
PF05423	Mycobact_memb	0.64
PF13385	Laminin_G_3	0.64
PF12728	HTH_17	0.64
PF12957	DUF3846	0.64
PF11367	DUF3168	0.64
PF01391	Collagen	0.64
PF05065	Phage_capsid	0.64

COG ID	Name	Functional Category	% Frequency in 156 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	1.92
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	1.92
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	1.92
COG3747	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	1.28
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	1.28
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
All Organisms	root	All Organisms	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
cellular organisms	root	All Organisms → cellular organisms	26.92 %
Viruses	superkingdom	All Organisms → Viruses	6.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.77 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.64 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.21 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.28 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.28 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.64 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.64 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.77 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.92 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	1.28 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	0.64 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.64 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.64 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.64 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.64 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.64 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.92 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	1.28 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.64 %
Negativicutes	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes	0.64 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.64 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.64 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.64 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.64 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.64 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.64 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.64 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.77 %
Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12	1.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	1.28 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1.28 %
unclassified Caulobacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales	0.64 %
Selenomonadales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales	0.64 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.64 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.64 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.64 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.64 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.64 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.64 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.64 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.64 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.77 %
Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12	1.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %
Vineibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Vineibacter	1.28 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1.28 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.64 %
Caulobacterales bacterium RIFOXYA1_FULL_67_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales → Caulobacterales bacterium RIFOXYA1_FULL_67_7	0.64 %
Sporomusaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae	0.64 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.64 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	0.64 %
Rubrimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rubrimonas	0.64 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.64 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.64 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.64 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.64 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.77 %
Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12	1.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %
Vineibacter terrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Vineibacter → Vineibacter terrae	1.28 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	1.28 %
Sphingobium scionense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium scionense	0.64 %
Bradyrhizobium neotropicale	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium neotropicale	0.64 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.64 %
Sporomusa	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Sporomusa	0.64 %
Pseudomonas putida group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas putida group	0.64 %
Rubrimonas cliftonensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rubrimonas → Rubrimonas cliftonensis	0.64 %
Caulobacterales bacterium RIFOXYA1_FULL_67_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales → Caulobacterales bacterium RIFOXYA1_FULL_67_7	0.64 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.64 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.64 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.64 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.77 %
Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12	1.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1.28 %
Vineibacter terrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Vineibacter → Vineibacter terrae	1.28 %
unclassified Sporomusa	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Sporomusa → unclassified Sporomusa	0.64 %
unclassified Geobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter	0.64 %
Pseudomonas putida	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas putida group → Pseudomonas putida	0.64 %
Sphingobium scionense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium scionense	0.64 %
Bradyrhizobium neotropicale	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium neotropicale	0.64 %
Rubrimonas cliftonensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rubrimonas → Rubrimonas cliftonensis	0.64 %
Caulobacterales bacterium RIFOXYA1_FULL_67_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales → Caulobacterales bacterium RIFOXYA1_FULL_67_7	0.64 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.64 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.64 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.64 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.77 %
Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12	1.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1.28 %
Vineibacter terrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Vineibacter → Vineibacter terrae	1.28 %
Geobacter sp. M18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp. M18	0.64 %
Sporomusa sp. KB1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Sporomusa → unclassified Sporomusa → Sporomusa sp. KB1	0.64 %
Pseudomonas putida	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas putida group → Pseudomonas putida	0.64 %
Sphingobium scionense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium scionense	0.64 %
Bradyrhizobium neotropicale	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium neotropicale	0.64 %
Rubrimonas cliftonensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rubrimonas → Rubrimonas cliftonensis	0.64 %
Caulobacterales bacterium RIFOXYA1_FULL_67_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales → Caulobacterales bacterium RIFOXYA1_FULL_67_7	0.64 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.64 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.64 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.64 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	0.64 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886012\|MBSR1b_contig_4839116	All Organisms → Viruses → Predicted Viral	2467	Open in IMG/M
2199352025\|deepsgr__Contig_14446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1339	Open in IMG/M
2199352025\|deepsgr__Contig_44924	Not Available	1082	Open in IMG/M
2199352025\|deepsgr__Contig_51025	Not Available	511	Open in IMG/M
2228664021\|ICCgaii200_c0545848	Not Available	603	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10508529	Not Available	601	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11263087	Not Available	1596	Open in IMG/M
3300000559\|F14TC_100458517	Not Available	524	Open in IMG/M
3300000559\|F14TC_103890461	Not Available	1201	Open in IMG/M
3300000890\|JGI11643J12802_10656854	Not Available	657	Open in IMG/M
3300000956\|JGI10216J12902_102149589	Not Available	786	Open in IMG/M
3300000956\|JGI10216J12902_116690135	Not Available	1424	Open in IMG/M
3300001977\|JGI24746J21847_1016690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Sporomusa → unclassified Sporomusa → Sporomusa sp. KB1	1048	Open in IMG/M
3300002128\|JGI24036J26619_10130973	Not Available	522	Open in IMG/M
3300004156\|Ga0062589_100000410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rubrimonas → Rubrimonas cliftonensis	9552	Open in IMG/M
3300004156\|Ga0062589_100286703	Not Available	1262	Open in IMG/M
3300004156\|Ga0062589_100937473	Not Available	801	Open in IMG/M
3300004156\|Ga0062589_101231087	Not Available	718	Open in IMG/M
3300004157\|Ga0062590_102423399	Not Available	554	Open in IMG/M
3300004281\|Ga0066397_10010656	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300004463\|Ga0063356_100004135	Not Available	12379	Open in IMG/M
3300004463\|Ga0063356_100338601	Not Available	1893	Open in IMG/M
3300004463\|Ga0063356_105356214	Not Available	551	Open in IMG/M
3300004463\|Ga0063356_106414770	Not Available	504	Open in IMG/M
3300004643\|Ga0062591_100364929	Not Available	1175	Open in IMG/M
3300005288\|Ga0065714_10065249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales → Caulobacterales bacterium RIFOXYA1_FULL_67_7	11465	Open in IMG/M
3300005293\|Ga0065715_10174310	All Organisms → Viruses → Predicted Viral	1523	Open in IMG/M
3300005331\|Ga0070670_100009690	All Organisms → cellular organisms → Bacteria	8223	Open in IMG/M
3300005331\|Ga0070670_101629940	Not Available	593	Open in IMG/M
3300005456\|Ga0070678_101772676	Not Available	582	Open in IMG/M
3300005526\|Ga0073909_10250076	Not Available	787	Open in IMG/M
3300005617\|Ga0068859_100055590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3983	Open in IMG/M
3300005713\|Ga0066905_100347569	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp. M18	1184	Open in IMG/M
3300005713\|Ga0066905_100378938	Not Available	1140	Open in IMG/M
3300006058\|Ga0075432_10319351	Not Available	650	Open in IMG/M
3300006195\|Ga0075366_10070974	All Organisms → cellular organisms → Bacteria → Acidobacteria	2075	Open in IMG/M
3300006195\|Ga0075366_10375952	Not Available	873	Open in IMG/M
3300006196\|Ga0075422_10144075	Not Available	947	Open in IMG/M
3300006196\|Ga0075422_10328873	Not Available	661	Open in IMG/M
3300006237\|Ga0097621_100047445	Not Available	3481	Open in IMG/M
3300006237\|Ga0097621_102098744	Not Available	540	Open in IMG/M
3300006358\|Ga0068871_101250212	Not Available	697	Open in IMG/M
3300007004\|Ga0079218_10242365	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300009094\|Ga0111539_10003453	All Organisms → cellular organisms → Bacteria	20813	Open in IMG/M
3300009094\|Ga0111539_10022036	All Organisms → cellular organisms → Bacteria	7829	Open in IMG/M
3300009094\|Ga0111539_10047250	Not Available	5145	Open in IMG/M
3300009094\|Ga0111539_11154925	All Organisms → Viruses → environmental samples → uncultured marine virus	900	Open in IMG/M
3300009094\|Ga0111539_11434694	Not Available	801	Open in IMG/M
3300009146\|Ga0105091_10093943	Not Available	1368	Open in IMG/M
3300009146\|Ga0105091_10340317	Not Available	738	Open in IMG/M
3300009156\|Ga0111538_11187618	Not Available	964	Open in IMG/M
3300009156\|Ga0111538_11380651	Not Available	889	Open in IMG/M
3300009156\|Ga0111538_11510409	Not Available	847	Open in IMG/M
3300009156\|Ga0111538_11666361	Not Available	803	Open in IMG/M
3300009168\|Ga0105104_10006804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12	7622	Open in IMG/M
3300009168\|Ga0105104_10006963	Not Available	7518	Open in IMG/M
3300009168\|Ga0105104_10007047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7457	Open in IMG/M
3300009168\|Ga0105104_10011851	Not Available	5441	Open in IMG/M
3300009168\|Ga0105104_10015099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4687	Open in IMG/M
3300009168\|Ga0105104_10016377	Not Available	4448	Open in IMG/M
3300009168\|Ga0105104_10114944	Not Available	1450	Open in IMG/M
3300009168\|Ga0105104_10171208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Vineibacter → Vineibacter terrae	1177	Open in IMG/M
3300009609\|Ga0105347_1000329	Not Available	23494	Open in IMG/M
3300009610\|Ga0105340_1000304	All Organisms → cellular organisms → Bacteria	24227	Open in IMG/M
3300009610\|Ga0105340_1030744	Not Available	2086	Open in IMG/M
3300009610\|Ga0105340_1237473	Not Available	778	Open in IMG/M
3300009678\|Ga0105252_10089126	Not Available	1224	Open in IMG/M
3300010047\|Ga0126382_10090135	Not Available	1948	Open in IMG/M
3300010047\|Ga0126382_10177676	All Organisms → Viruses → Predicted Viral	1490	Open in IMG/M
3300010047\|Ga0126382_10372129	Not Available	1104	Open in IMG/M
3300010047\|Ga0126382_11173257	Not Available	686	Open in IMG/M
3300010047\|Ga0126382_11460777	Not Available	627	Open in IMG/M
3300010362\|Ga0126377_10117200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium neotropicale	2455	Open in IMG/M
3300010362\|Ga0126377_10147418	Not Available	2207	Open in IMG/M
3300010362\|Ga0126377_10337161	All Organisms → cellular organisms → Bacteria	1500	Open in IMG/M
3300011397\|Ga0137444_1002040	All Organisms → cellular organisms → Bacteria	2310	Open in IMG/M
3300011398\|Ga0137348_1000828	All Organisms → Viruses → Predicted Viral	4904	Open in IMG/M
3300011400\|Ga0137312_1000213	Not Available	4616	Open in IMG/M
3300011402\|Ga0137356_1005473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas putida group → Pseudomonas putida	2168	Open in IMG/M
3300011407\|Ga0137450_1006291	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300011412\|Ga0137424_1046375	Not Available	781	Open in IMG/M
3300011421\|Ga0137462_1004191	All Organisms → Viruses → Predicted Viral	2459	Open in IMG/M
3300011423\|Ga0137436_1000062	Not Available	36364	Open in IMG/M
3300011433\|Ga0137443_1122909	Not Available	757	Open in IMG/M
3300011439\|Ga0137432_1145798	Not Available	759	Open in IMG/M
3300011440\|Ga0137433_1014501	Not Available	2302	Open in IMG/M
3300011440\|Ga0137433_1105466	Not Available	884	Open in IMG/M
3300011443\|Ga0137457_1033840	All Organisms → Viruses → Predicted Viral	1422	Open in IMG/M
3300012039\|Ga0137421_1009035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2162	Open in IMG/M
3300012041\|Ga0137430_1015851	Not Available	1923	Open in IMG/M
3300012231\|Ga0137465_1031039	Not Available	1571	Open in IMG/M
3300012892\|Ga0157294_10072537	Not Available	831	Open in IMG/M
3300012895\|Ga0157309_10045159	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300012895\|Ga0157309_10233234	Not Available	592	Open in IMG/M
3300012898\|Ga0157293_10072318	Not Available	825	Open in IMG/M
3300012900\|Ga0157292_10227299	Not Available	637	Open in IMG/M
3300012905\|Ga0157296_10404687	Not Available	512	Open in IMG/M
3300012909\|Ga0157290_10076933	Not Available	932	Open in IMG/M
3300012916\|Ga0157310_10078399	Not Available	1019	Open in IMG/M
3300015200\|Ga0173480_10054473	All Organisms → Viruses → Predicted Viral	1810	Open in IMG/M
3300015200\|Ga0173480_10212699	Not Available	1032	Open in IMG/M
3300015200\|Ga0173480_10324277	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	869	Open in IMG/M
3300015256\|Ga0180073_1000014	All Organisms → cellular organisms → Bacteria	15435	Open in IMG/M
3300017965\|Ga0190266_11182833	Not Available	528	Open in IMG/M
3300018031\|Ga0184634_10000052	Not Available	24270	Open in IMG/M
3300018031\|Ga0184634_10000152	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	15389	Open in IMG/M
3300018067\|Ga0184611_1001257	Not Available	5282	Open in IMG/M
3300018073\|Ga0184624_10159911	Not Available	994	Open in IMG/M
3300018083\|Ga0184628_10104821	Not Available	1456	Open in IMG/M
3300018083\|Ga0184628_10248603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	934	Open in IMG/M
3300018476\|Ga0190274_10192154	Not Available	1783	Open in IMG/M
3300018476\|Ga0190274_10585532	Not Available	1138	Open in IMG/M
3300018476\|Ga0190274_11965675	Not Available	681	Open in IMG/M
3300018476\|Ga0190274_12277026	Not Available	639	Open in IMG/M
3300018481\|Ga0190271_10376306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1508	Open in IMG/M
3300019356\|Ga0173481_10216905	Not Available	840	Open in IMG/M
3300019356\|Ga0173481_10625637	Not Available	570	Open in IMG/M
3300019362\|Ga0173479_10051031	Not Available	1357	Open in IMG/M
3300019362\|Ga0173479_10086568	Not Available	1128	Open in IMG/M
3300020009\|Ga0193740_1005549	Not Available	2182	Open in IMG/M
3300020009\|Ga0193740_1012254	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1377	Open in IMG/M
3300020009\|Ga0193740_1063507	Not Available	562	Open in IMG/M
3300020020\|Ga0193738_1000229	All Organisms → cellular organisms → Bacteria	38836	Open in IMG/M
3300020020\|Ga0193738_1007509	All Organisms → cellular organisms → Bacteria	3654	Open in IMG/M
3300022901\|Ga0247788_1020190	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1162	Open in IMG/M
3300022910\|Ga0247768_1188676	Not Available	624	Open in IMG/M
3300022917\|Ga0247777_1000060	Not Available	41408	Open in IMG/M
3300023078\|Ga0247756_1054752	Not Available	705	Open in IMG/M
3300023168\|Ga0247748_1050112	Not Available	634	Open in IMG/M
3300023270\|Ga0247784_1186405	Not Available	543	Open in IMG/M
3300025315\|Ga0207697_10078352	All Organisms → cellular organisms → Bacteria → Proteobacteria	1390	Open in IMG/M
3300025930\|Ga0207701_10013675	All Organisms → cellular organisms → Bacteria → Acidobacteria	7906	Open in IMG/M
3300025930\|Ga0207701_11099113	Not Available	659	Open in IMG/M
3300026121\|Ga0207683_11649797	Not Available	590	Open in IMG/M
3300027513\|Ga0208685_1000190	Not Available	23361	Open in IMG/M
3300027533\|Ga0208185_1000342	All Organisms → cellular organisms → Bacteria	24132	Open in IMG/M
3300027533\|Ga0208185_1060209	Not Available	908	Open in IMG/M
3300027533\|Ga0208185_1106715	Not Available	656	Open in IMG/M
3300027743\|Ga0209593_10000766	All Organisms → cellular organisms → Bacteria	14352	Open in IMG/M
3300027743\|Ga0209593_10000934	All Organisms → cellular organisms → Bacteria	12820	Open in IMG/M
3300027743\|Ga0209593_10003039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12	7051	Open in IMG/M
3300027743\|Ga0209593_10048153	Not Available	1647	Open in IMG/M
3300027743\|Ga0209593_10149752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Vineibacter → Vineibacter terrae	838	Open in IMG/M
3300027743\|Ga0209593_10159023	Not Available	808	Open in IMG/M
3300027876\|Ga0209974_10396441	Not Available	541	Open in IMG/M
3300027886\|Ga0209486_10228137	All Organisms → Viruses → Predicted Viral	1066	Open in IMG/M
3300027907\|Ga0207428_10034616	All Organisms → Viruses → Predicted Viral	4135	Open in IMG/M
3300027907\|Ga0207428_10036882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12	3982	Open in IMG/M
3300027907\|Ga0207428_10086130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium scionense	2445	Open in IMG/M
3300027907\|Ga0207428_10702750	Not Available	723	Open in IMG/M
3300027907\|Ga0207428_10935380	Not Available	611	Open in IMG/M
3300027993\|Ga0247749_1015942	Not Available	773	Open in IMG/M
3300028710\|Ga0307322_10124085	Not Available	676	Open in IMG/M
3300031226\|Ga0307497_10064086	Not Available	1333	Open in IMG/M
3300031854\|Ga0310904_11257856	Not Available	535	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.28%
Host-Associated	Host-Associated	23.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	45.51%
Aquatic	Environmental → Aquatic	30.77%
Plants	Host-Associated → Plants	23.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.95%
Sediment	Environmental → Aquatic → Sediment	20.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.18%
Freshwater	Environmental → Aquatic → Freshwater	10.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.33%
Roots	Host-Associated → Plants → Roots	3.21%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	20.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	10.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.13%
Loam	Environmental → Terrestrial → Soil → Loam	3.21%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.92%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.28%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.28%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.28%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	20.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.90%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	10.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.05%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.13%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.92%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.28%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.64%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.95%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	16.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	10.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.13%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.85%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.21%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.28%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.28%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.28%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.28%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.28%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.28%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.64%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001977	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5	Host-Associated	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011397	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT319_2	Environmental	Open in IMG/M
3300011398	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT600_2	Environmental	Open in IMG/M
3300011400	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2	Environmental	Open in IMG/M
3300011402	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT830_2	Environmental	Open in IMG/M
3300011407	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT454_2	Environmental	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300011421	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT769_2	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015256	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10D	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020009	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s1	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300022910	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L016-104C-6	Environmental	Open in IMG/M
3300022917	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L154-409C-5	Environmental	Open in IMG/M
3300023078	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L066-202C-4	Environmental	Open in IMG/M
3300023168	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S064-202C-5	Environmental	Open in IMG/M
3300023270	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L169-409R-5	Environmental	Open in IMG/M
3300024317	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027993	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S199-509C-5	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MBSR1b_0004.00005330	2162886012	Miscanthus Rhizosphere	MAIVQAGKQFTAADLKNSAGHVAAMITEFVEQGMGMKAQLESWPDADLITLGLTQDEVNAIKGFFVGDLPAMAAQLQASS
deepsgr_02362340	2199352025	Soil	MAIVQAGKQFTSDDLQRTAGDLASLLRDTLQRCTDYRLQLESFPDADLAAMGLAQEEINAIKGFFVGDVPGMASAFAASTWVKQLLGTGV
deepsgr_00432880	2199352025	Soil	MAIVQAGKQFTDADVQRTAGDLAALLRDTLAHADQFRVQLESWPDADLVALGLAQDEINAIKGFYVGDAPAMLAAFKASTWVKQLLGTGV
deepsgr_00560780	2199352025	Soil	MPIVQAGKQFTASDLKQSAGDLAEAIRNQLTHAESMRVQLESMPDADLVTLGLSQDEINAIKGFYVGDVPTMANAFKASTWVKQLLGTGV
ICCgaii200_05458481	2228664021	Soil	DLQRTAGQLATMIRDALSGATDFRIQLESMPDADLILLGLTQEEVNAIKGFYVGDVPALANLFTASAWVKQLLGLGV
ICChiseqgaiiFebDRAFT_105085291	3300000363	Soil	MAIVQAGKQFTAVDIQRTAGDLAALLRDAIARSDNFRIQLESWPDADLIALEGGLSQEEVNAIKGFYIGDLPAIRTAFTGSTWVKQLLGTGA*
ICChiseqgaiiFebDRAFT_112630871	3300000363	Soil	MALVQAGKQFTADDLQRTAGQLATMIRDALSGATDFRIQLESMPDADLILLGLTQEEVNAIKGFYVGDVPALANLFTASAWVKQLLGLGV*
F14TC_1004585171	3300000559	Soil	MAIVQAGKQFTADDIKRRAGDLAQMLQTQLQDGNELRAQLESWPDADLVTLGLTQDEINAIKGFFVGDLPTMYNALVASVWIKQLLGTGV*
F14TC_1038904613	3300000559	Soil	MAIVQAGKTFTAEDLKRTAGTLAGFLRDYLQDGNDLRVQLESWPDSDLIELGLAQEEINAIKGFFVGDIPPIYNAFAASVWVKQLLGTGV*
JGI11643J12802_106568541	3300000890	Soil	ITADDLQRTAGQLATMIRDALSGATDFRIQLESMPDADLILLGLTQEEVNAIKGFYVGDVPALANLFTASAWVKQLLGLGV*
JGI10216J12902_1021495891	3300000956	Soil	MAIVQAGNQFTSEDLHRTAGRLATAIRDAVSECNEFRVQLESWPDSDLIELGLSQEEINAMKGFFVGDLPPIMTALQGSVWLKQLLGLGV*
JGI10216J12902_1166901353	3300000956	Soil	MAIVQAGKQFTADQLQATAGDTAALLRDVVARADHFRIQLETFPDPDLIEMGLAQNEIDAIKGFYVGDMPAIKNLIAASTWIKQLLGTGV*
JGI24746J21847_10166901	3300001977	Corn, Switchgrass And Miscanthus Rhizosphere	MPIVMAGKTFTKDDLKNTAGNTAQNIRNNIQLGLNLKVQLESWPDADLVALGLTPDEVNAIKGFYVGDLPAIADL
JGI24036J26619_101309731	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	MAIVQAGKTFTKDDLKQTAGNLAALIRDHVQSGLDFKTQLESWPDADLVALGLAQDEINAIKGFFVGDLPAIANSLAASTWIKQLLGTGV*
Ga0062589_1000004108	3300004156	Soil	MAIVQAGKQFTAEDVKRTAGNVAGLIRDYVQDGLDFRTQLESWPDADMLALGLSQEEVNAIKGFFIGDLPAVAAQLQASAWIKQLLGTGV*
Ga0062589_1002867032	3300004156	Soil	VPIVQAGKQFTAADIKQTGGHVASMLTEFVESGMGFNAQLQSWPDADLVALGLAQEEINALKGFFIGDLPAIAALLQQSTWIKQLLGTGV*
Ga0062589_1009374732	3300004156	Soil	MAIVQAGKQFTVYDLKATAGNVAAALTQAVEDGQGFRLQLESWPDAELIVLGLTQEEVHAIKGFYVGDLPNIANLL
Ga0062589_1012310872	3300004156	Soil	MAIVQAGKQFTAADLKSSAGHVAAMLSQFVEDGLGLKAQLESWPDPDLITLGLTQEEINALKGFFVGDLPGIATALQGSTWIKQLLGTGV*
Ga0062590_1024233991	3300004157	Soil	MPITQAGKQFTAADLKTTAGNLAAMLTGVAQDGLDFKTQLETWPDADLIELGLTQDEINAIKGFFVGDLPAVAAALQASTWVKQLLGTGV*
Ga0066397_100106563	3300004281	Tropical Forest Soil	MAIVQAGKMFTAKDLQDTAGNLASMLNDVTQSGLDLKRQLEGWPDADLVTLGLQQAQIDAIKGFYIGDLPAVSTALSASVWLRSLIGLGV*
Ga0063356_1000041357	3300004463	Arabidopsis Thaliana Rhizosphere	MALVQAGKQFTADDLRQTAGNVASLIRDYLQTGTDFRIQLESMPDADLVVLGLTQEQVNAIKGFYVGDVPAMANLFAASVWVKQLLGTGV*
Ga0063356_1003386013	3300004463	Arabidopsis Thaliana Rhizosphere	MALIQAGKQFTAADVKQTAGNVATLIRDYLQTGTDFRIQLESMPEADLVTLGLSVEEINAIKGFYVGDLPGIVAAFTASVWVKQLLGTGV*
Ga0063356_1053562142	3300004463	Arabidopsis Thaliana Rhizosphere	MAIVQAGKQFTAEDLKRTAGDTATFIRLYLQNGTDFRIQLESWPEADLVTLGLSLEEINAIKGFYVGDLPQIVTLFTASVWVKQLLGTGV*
Ga0063356_1064147702	3300004463	Arabidopsis Thaliana Rhizosphere	MAIVQAGKQFTADQLQQQAGDLASQLRDAATRGMQLKAQLETWPDADLTALGLAQEEVNAIKGFFVGDLPAIYTAVTGSTWIKQLLGTGV*
Ga0062591_1003649294	3300004643	Soil	MPITQAGRQFNAADIKKTAGDLATVLLSITQDGDDFRVQLESWPDADLILLGLTQEEVNAIKGFYVGDLPAVFAAVRASTWIKQLVGTGV*
Ga0065714_1006524913	3300005288	Miscanthus Rhizosphere	MAIVQAGKQFTAADLKNSAGHVAAMITEFVEQGMGMKAQLESWPDADLITLGLTQDEVNAIKGFFVGDLPAMAAQLQASSWIKQLLGTGV*
Ga0065715_101743101	3300005293	Miscanthus Rhizosphere	MAIVQAGKQFTAADLKNSAGHVAAMITEFVEQGMGMKAQLESWPDADLITLGLTQDEVNAIKGFFVGDLPAMAAQLQAS
Ga0070670_1000096908	3300005331	Switchgrass Rhizosphere	MPIVMAGKTFTKDDLKNTAGNTAQNIRNNIQLGLNLKVQLESWPDADLVALGLTPDEVNAIKGFYVGDLPAIADLLAQSAWIKQLLGTGL*
Ga0070670_1016299401	3300005331	Switchgrass Rhizosphere	MPITQAGKPFTTFDIKLTAGNLATRLRDAAQDGLNFKAQLETWPDADLIEMGLTQDEVNAIKGFYVGDLPAIAGAISASTWIKQLLGTSV*
Ga0070678_1017726761	3300005456	Miscanthus Rhizosphere	MAIVQAGRPVTAEGIKMTAGDVATKIRNNILDGEDFRRQLESWPDADLITLGLSQEQIDAIKGFYVGDLPQLTATLQASTWILKLLGVGVATLPPPFGPPVI*
Ga0073909_102500762	3300005526	Surface Soil	MPIVQAGKQFTAADIKDAAGKLATWLQNSLTDSSEFRVQLESWPDADLVELGLTQEEINAIKGFFVGDLPAMTTAFQNSAWVKQLLGTSV*
Ga0068859_1000555903	3300005617	Switchgrass Rhizosphere	MPIVMAGKTFTKDDLKNTAGNTAQNIRNNIQLGLNLKVQLESWPDADLVALGLSQDEVNAIKGFYVGDLPAMADLLAASSWIKQLLGTGL*
Ga0066905_1003475692	3300005713	Tropical Forest Soil	MAIVQAGKTFTAKDLQDTAGALAAMLSNITQDGLDLKKQLEGWPDADLVTLGLAQDQINAIKGFYIGDLPAIADALNASTWIRQLIGLGV*
Ga0066905_1003789382	3300005713	Tropical Forest Soil	MAIVQAGLGFTAEQLKQTGGKLAAAIRDSVQDGGDFRTQLESWPDADLVAMGLTQDEVNALKGFFVGDLPQIQVALAQSVWIKQLLGLGV*
Ga0075432_103193512	3300006058	Populus Rhizosphere	MPIVQAGKQFTATDLKNSAGHVATMLTSFVEDGMGMKAQLESWPDPDLIELGLTQPEINAMKGFFVGDLPAIAAQLQASTW
Ga0075366_100709743	3300006195	Populus Endosphere	MAIVQAGKQFTADSLQAQAGDIATVLRDMIAHGDQFRVQLESWPDPDLIELGLSQEEINAIKGFYVGDLPQLAALLKSSTWIKQLLGTGV*
Ga0075366_103759522	3300006195	Populus Endosphere	MPIVQAGKQFTATDLKNSAGHVATMLTSFVEDGMGMKAQLESWPDPDLIELGLTQPEINAMKGFFVGDLPAIAAQLQASTWIKQLLGTGV*
Ga0075422_101440752	3300006196	Populus Rhizosphere	MAIVQAGKQFTAENVQSTAGEVAARIRDAIADGDHFRIQLESWPDADLITLGLSQEEVNAIKGFYVGDLPALGALLAQSVWVKQLLGTGV*
Ga0075422_103288732	3300006196	Populus Rhizosphere	MAITQAGKQFTADQVQQTAGMLASMILQAVQQGGNFRVQLESWPDADLVEMGLSQEEVNAIKGFYVGDLPAIAALLSQSVWMKQLVGTGV*
Ga0097621_1000474452	3300006237	Miscanthus Rhizosphere	MPITQAGKQFTAADVKSTAGSLAAMLLNITQDGGDFSTQLQSWPDADLITLGLSQDEINAIKGFFVGDLPAITAALQASTWIKQLVGLGV*
Ga0097621_1020987442	3300006237	Miscanthus Rhizosphere	VMPITQAGKPFTTFDIKLTAGNLATRLRDAAQDGLNFKAQLETWPDADLIEMGLTQDEVNAIKGFYVGDLPAIAGAISASTWIKQLLGTSV*
Ga0068871_1012502122	3300006358	Miscanthus Rhizosphere	MPIVQAGKQFTAADIKARAGDLAQMLQTHIQDGNELRAQLESWPDADLIELGLSQEEINAIKGFFVGDLPAMYNALVQSTWIKQLLGTGV*
Ga0079218_102423652	3300007004	Agricultural Soil	MPITQAGKQFTSADLKATAGNLASFLTDTAQNGLEFKTQLETWPDADLIELGLAQDEINAIKGFFVGDLPAIASALQASTWIKQLLGTGV*
Ga0111539_1000345312	3300009094	Populus Rhizosphere	MERKSEMAIIQAGRQFTAEQLQADAGSVAAMVRDAVQRADNLRAQLESWPDADLITLGLSQEEVNAMKGFYVGDMPAIRDLLKASTWMKQLLGTGL*
Ga0111539_100220362	3300009094	Populus Rhizosphere	MAIVQAGHKFTAEDLHRTAGAVATQIRDAVQNGNDFRIQLESWPDGDLILLGLTQEEVNAVKGFFVGDLPAISAQLAASVWVKQLLGTGV*
Ga0111539_100472503	3300009094	Populus Rhizosphere	MAITQAGKQFTADDLQRTAGQLAAMILSAVQQGGNLRVQLESWPDSDLIELGLSQEEINALKGFFVGDLPAIAAQLSASVWLKQLVGTGV*
Ga0111539_111549251	3300009094	Populus Rhizosphere	STAGEVAARIRDAIADGDHFRVQLDSWPDADLITLGLSQEEVNAIKGFYVGDLPALGALLAQSIWVKQLLGTGV*
Ga0111539_114346942	3300009094	Populus Rhizosphere	MAIVQAGKTFTKDDLKLTAGNLAAHIRDNIQSGLDFKKQLESWPDADLITLGLEQAEINAIKGFYVGDLPQLAALLKSSTWIKQLLGTGV*
Ga0105091_100939433	3300009146	Freshwater Sediment	MIITAGKPVTADSLKATAGNLATLIRDYVQDGNDFRVQLESWPDSELVVLGLTQEEVNAIKGFYVGDLPAITNAIQGSVWIKQLLGVGV*
Ga0105091_103403172	3300009146	Freshwater Sediment	MPLVQAGKTFTALDLQDTAGHIASLIRDHVQSGMDLRTQLESWPDADLIELGLAQNQIDAIKGFYIGDLPAMAT
Ga0111538_111876181	3300009156	Populus Rhizosphere	MPITQAGKHFTSADLKSTAGNLASMLRDISQDGLDFKAQLETWPDAELVTMGLTQDEINAIKGFYVGDLPAIASAIQSSTWIKQLLGTGV*
Ga0111538_113806511	3300009156	Populus Rhizosphere	MAIVQAGKQFTAEDLERVAGQLATALRNALQQCNDYRIQLESWPDPDIVELGLDPDQINAQKGFFVGDLPALTDAF
Ga0111538_115104092	3300009156	Populus Rhizosphere	MAIVQAGKQFTAENIQSTAGEVAARIRDAIADGDHFRVQLESWPDADLITLGLSQEEVNAIKGFYVGDLPALGALLAQS
Ga0111538_116663612	3300009156	Populus Rhizosphere	MAIVQAGKQFTADDLEQTAGQLATQVRNAVQDADNLRVQLESWPDADLVLLGLTQEQANAMKGFYVGDLPAIKSAVANSQWIKQLLGLGV*
Ga0105104_100068048	3300009168	Freshwater Sediment	MAIVQAGKQFTAADVKQTAGNLAASITDYVQMGGDFRVQLESWTEADLVALGLSLEEINAIKGFYVGDLPAIAAQLQASTWIKQLLGTGV*
Ga0105104_100069633	3300009168	Freshwater Sediment	MAIIQAGKPFTADSLKATAGNLATLIRDYVQDGNDFRVQLESWPDSELVVLGLTQEEVNAVKGFFVGDLPAITNAIQGSVWIKQLLGTGV*
Ga0105104_1000704710	3300009168	Freshwater Sediment	VAIVQAGKQFTAADVKSTAGHVATMLSQFVEDGLGFKAQLESWPDADLIELGLSQSEINAVKGFYVGDLPAIAALLQGSSWVKQLLGTGV*
Ga0105104_100118514	3300009168	Freshwater Sediment	MAIVQAGKPVTADSIKATAGNLATLIRDSVQQGDAFRVQLESWPDADLIELGLDQADVNAIKGFYIGDLPQLKNTVAASAWIKQLLGTGV*
Ga0105104_100150991	3300009168	Freshwater Sediment	MAIVQAGRVFTADDVKRTAGNIATILTDGIEQGNAFRIQLESWPDADMVTLGLSQEEVNALKGFFVGDLPALATLLSQS
Ga0105104_100163771	3300009168	Freshwater Sediment	MAIVQAGKQFTADDLKRTAGNLADAITNNVQMGGDFRVQLESWTNEDLQALGLTLEEINAIKGFFVGDLPVIAAQLQASTWIKQLLGTGV*
Ga0105104_101149442	3300009168	Freshwater Sediment	MAIVQAGNKFTAEDLHRTAGFVATQIRDAVQSGGDFRVQLESWPDGDLLGLGLTQEEVNAIKGFFVGDLPGITALLQQSTWIKQLLGTGV*
Ga0105104_101712082	3300009168	Freshwater Sediment	MPITQAGKQFTSADLKTTAGNLASMLRDISQDGLDFKIQLETWPDVDLLDLGLTQDEINAIKGFFVGDLPAIASSIQASTWIKQLLGTGV*
Ga0105347_100032927	3300009609	Soil	MALTQAGRPFTADDIQNTAGSLATLLRDAVARGGHFRVQLESWPDGDLITLGLTQEEINAIKGFFVGDLPAMTALVQQSVWIKQLLGTGV*
Ga0105340_100030416	3300009610	Soil	MAMVQAGRQFTADDLKRTAGNLASVITDTVQNGSDFRVQLESWPDADLVALGLSQEEINAIKGFFVGDLPAIAAQLQASTWIKQLLGLGV*
Ga0105340_10307443	3300009610	Soil	MAITQAGKQFTADDVQRTAGDLAAVLRDTVQRGNNFKVQLESWPEADLVELGLSLEDINAIKGFYVGDLPAITALVQSSVWIKQLLGTGV*
Ga0105340_12374731	3300009610	Soil	MAIVQAGRPVTGDDVKMTAGRLATMIRDAMQDGNDFRVQLESWPDPDLMELGLTQPEINAIKGFYIGDLPQMTALLQASTWIKQLLGTGV*
Ga0105252_100891261	3300009678	Soil	MAIVQAGRQFTAEDITRTAGNLAATLTDATQNGGDFRVQLESWPDADLVLLGLTQEQVNAIKGFYVGDLPAIATLLAQSVWIKQLLGTG
Ga0126382_100901352	3300010047	Tropical Forest Soil	MPIVQAGRTFTAADLKMTAGNLASFLRDAIQNAADLRVQLESFPDADLLAMGLTQEEINAQKGFFIGDLPAIQSAFTGSTWVKQLLGLGQ*
Ga0126382_101776763	3300010047	Tropical Forest Soil	MAIVQAGKQFTADELQQQAGNLAAMLRDHATDGMQLKAQLETWPDADLIALGLTQPEIDAIKGFFIGDLPAIYTALTASTWIKQLLGTGV*
Ga0126382_103721292	3300010047	Tropical Forest Soil	MAIVQAGKTFTAADLQAMAGNLASILSDTAQNGLDLKKQLESWPDADLITLGLTQEQINAIKGFYIGDLPAIATALSNSTWIRQLIGLGV*
Ga0126382_111732572	3300010047	Tropical Forest Soil	MAIVLAGKTFTAQQLQETAGNLAAALRDRTQDCGDFKTQLETWPDADLVAMGLTQAQVDAIKGFFIGDLPAI
Ga0126382_114607772	3300010047	Tropical Forest Soil	MRGVGAWVKDDVSKGRAMPIVMAGKQFTKDDVLATAGNLAAMLTDHAQNGLEFKTQLETWPDADLVTLGLSQDQINAIKGFYIGDLPAIADLLKASTWIKQLLGTGV*
Ga0126377_101172002	3300010362	Tropical Forest Soil	MAIVQAGKQFTADDVKTRAGDLASMLQTHMQDGNEFRVQLESWPDADLVELGLTQDEVNAIKGFFVGDLPPMYSQMAASTWLKQLLGTGV*
Ga0126377_101474183	3300010362	Tropical Forest Soil	MAIVQAGKTFTAKDLQTTAGNLAAMLADVTQSGLDLKRQLEGWPDADLVTLGLEQAQIDAIKGFYIGDLPAISTQLNASVWLRSLVGLGV*
Ga0126377_103371614	3300010362	Tropical Forest Soil	MAIVQAGKQFTAKDLQDMAGNLASILTDTVQNGLDLKKQLEGWPDADLITLGLDQNQINAIKGFYIGDLPAIADALNASTWIRQLIGLGV*
Ga0137444_10020401	3300011397	Soil	ITQAGKQFTAGDLKATAGNLAALLIGVSQDGLDFKTQLETWPDADLITMGLTQDECNAIKGFFVGDLPAIAASLQASTWIKQLLGTGV*
Ga0137348_10008284	3300011398	Soil	MAIVQAGRVFTADDVKRTAGNIATILTDGIEQGNAFRIQLESWPDADMVTLGLSQEEVNALKGFFVGDLPALATLLSQSVWIKQLLGTGV*
Ga0137312_10002134	3300011400	Soil	MAITQAGLQFTADGLQSTAGMVATALRDAVARGSQLRVQLESWPDSDLIELGLSQEETNAIKGFFVGDLPALAALLQSSVWIKQLLGTGV*
Ga0137356_10054734	3300011402	Soil	MAIVQAGRQFTAEDITRTAGNLAATLTDATQNGGDFRVQLESWPDADLVLLGLTQEQVNAIKGFYVGDLPAIATLLAQSVWIKQLLGTGV*
Ga0137450_10062912	3300011407	Soil	MPVAQAGKQFTAADLQSTAGTLASVFRDIAQDGLDFKAQLETWPDADLVTLGLTQDEINAIKGFYVGDLPAIAAALQASTWIKQLLGTGV*
Ga0137424_10463752	3300011412	Soil	MPITQAGKQFTADDIQRTAGGVATNLRLAVQQANDFRIQLESWPDPDLVTLGLDQNEINAIKGFYVGDIPAITALLQQSTWIKQLLGTGV*
Ga0137462_10041912	3300011421	Soil	MPITQAGKQFTAGDLKATAGNLAALLIGVSQDGLDFKTQLETWPDADLITMGLTQDECNAIKGFFVGDLPAIAASLQASTWIKQLLGTGV*
Ga0137436_100006235	3300011423	Soil	MAVVQAGKQFTAEDIHQSAGALATKLRDAVSQGGEFRVQLESWPDADLIVMGLSQDEINAIKGFFVGDLPAIAGLLQASTWIKQLLGTGVGVV*
Ga0137443_11229092	3300011433	Soil	MPITQAGKQFTAADLQSTAGALASVLRDISQDGLDFKTQLETWPDADLIELGLTQDEINAIKGFYVGDLPAIAAALQASTWIKQLLGTGV*
Ga0137432_11457983	3300011439	Soil	FTADGLQSTAGMVATALRDAVARGSQLRVQLESWPDSDLIELGLSQEETNAIKGFFVGDLPALAALLQSSVWIKQLLGTGV*
Ga0137433_10145012	3300011440	Soil	MPIVQAGKQFTAADLKNSAGHVASMLMQFVEDGIGLKAQLESWPDPDLVLLGLTQEEINALKGFYIGDLPAIAAQLQASSWIKQLLGTGV*
Ga0137433_11054662	3300011440	Soil	MPITQAGKQFTAEDIQRTAGNVATNLRLAVQQSNDFRIQLESWPDPDLVELGLDQNEINAIKGFYAGDIPAITALLQQSTWIKQLLGTGV*
Ga0137457_10338401	3300011443	Soil	MPITQAGKQFTAADLQSTAGALASVLRDISQDGLDFKTQLETWPDADLIELGLTQDEINAIKGFYVGDLPAIAAALQASTWIKQLL
Ga0137421_10090352	3300012039	Soil	MPITQAGKQFTAADLKSIAGTQASFLRDTIQTLLNFKTQLETMTDADLIALGLAQPEIDAIKGFVIGDVPPIAALVQASTWIKQLLGTGV*
Ga0137430_10158512	3300012041	Soil	MPIVQAGKQFTAADLKNSAGHVAAMLTSFAEDGLGLKAQLESWPDPDLIELGLSQAEINAIKGFYVGDLPAIAALLQQSTWIKQLLGTGV*
Ga0137465_10310392	3300012231	Soil	MAIIQAGKQFTVDDLQRQAGEVAAMLRDAVTRGNNLRVQLETWPDPDLIELGLSQPEIDAIKGFYVGDLPAITAQLQASTWIKQLLGTGV*
Ga0157294_100725373	3300012892	Soil	MPITQAGRQFNAADIKKTAGDLATVLLSITQDGDDFRVQLESWPDADLILLGLTQEEVNAIKGFYVGDLPAVFASVRASTWIKQLVGTGV*
Ga0157309_100451592	3300012895	Soil	MPITQAGKQFTAADLKATAGNLAALLTGVAQDGLDFKTQLETWPDADLIELGLTQDEINAVKGFYVGDLPAIAAALQASTWIKQLLGTGV*
Ga0157309_102332342	3300012895	Soil	MPITQAGRQFTAADIKRLAGDIAALLLNTTQDGGDFRVQLESWPDADLVLLGLTQEEVNVIKGFYVGDLPAITAQLQAS
Ga0157293_100723181	3300012898	Soil	MPITQAGRQFTAADIKRLAGDIAALLLNTTQDGGDFRVQLESWPDADLVLLGLTQEEVNVIKGFYVGDLPAITAQLQASSWIKQLVGTGV*
Ga0157292_102272991	3300012900	Soil	MPITQAGKQFTSADLKSTAGNLAALLTGVAQDGLDFKTQLETWPDADLVTMGLTQDEINAIKGFYVGDLPAIAAA
Ga0157296_104046872	3300012905	Soil	QFNAADIKKTAGDLAAVLLANTQDGDDFRVQLESWPDADLILLGLTQEEVNAIKGFYVGDLPAVFASVRASTWIKQLVGTGV*
Ga0157290_100769332	3300012909	Soil	MPITQAGKTFTVDDIKRTAGSIASFLLDTAQSGGDFRVQLESWPDADLILMGLTQEEVNAIKGFYVGDLPAITAQLQASTWIKQLVGVGV*
Ga0157310_100783992	3300012916	Soil	MPITQAGKQFTSADIKTTAGNLAAMLRDIAQDGLDFKTQLETWPDADLVTLGLTQDEINAIKGFYVGDLPAIASALQASTWIKQLLGTGV*
Ga0173480_100544732	3300015200	Soil	MPITQAGKTFTVDDIKRTAGSIASFLLDTTQSGGDFRVQLESWPDADLILMGLTQEEVNAIKGFYVGDLPAITAQLQASTWIKQLVGVGV*
Ga0173480_102126991	3300015200	Soil	GAPTMPITQAGKQFTAADLKATAGNLAALLTGVAQDGLDFKTQLETWPDADLIELGLTQDEINAVKGFYVGDLPAIAAALQASTWIKQLLGTGV*
Ga0173480_103242771	3300015200	Soil	MPITQAGKQFTAADLKTTAGNLAAMLTGVAQDGLDFKTQLETWPDADLIELGLAQEEINAIKGFFVGDLPAVAAALQASTWVKQLLGTGV*
Ga0180073_10000143	3300015256	Soil	MPITQAGKQFTAADLQSTAGTLASVFRDIAQDGLDFKAQLETWPDADLVTLGLTQDEINAIKGFYVGDLPAIAAALQASTWIKQLLGTGV*
Ga0190266_111828332	3300017965	Soil	MPITQAGKQFTADDIKRTAGSIASLLLDTTQSGGDFRIQLESWPDADLIEMGLSQEQVNAIKGFFVGDLPAITAALQASTWIKQLVGVGV
Ga0184634_1000005221	3300018031	Groundwater Sediment	MPIIQAGKQFTADQIQQTAGDLASILRDGAQRGQAFSVQLQTWPDADLIELGLAQDEINAIKGFFVGDLPAIAAQLQASTWIKQLLGTGV
Ga0184634_100001527	3300018031	Groundwater Sediment	MAIVQAGRPVTVDDVKMTAGRLATMIRDAVQDGGDFRVQLESWPDPDLIALGLSQDEINAIKGFYVGDVPGIAALLSASTWIKQLLGTGV
Ga0184611_10012574	3300018067	Groundwater Sediment	MAIVMAGKTFTKDDVKRTAGQVSAALTDLVQQANDFRVQLESWPDPDLIELGLSQPEINAIKGFYVGDLPAITAQLQASTWIKQLLGTGV
Ga0184624_101599112	3300018073	Groundwater Sediment	MAIVQAGKQFTSDDLKNSAGYVAALLMQATEDALGMKAQLESWPDPDLIELGLSQPEINAIKGFYVGDLPAIAAQLQASTWIKQLLGTGV
Ga0184628_101048213	3300018083	Groundwater Sediment	MAIVQAGRTFTVEDLKRTAGSLASLITTGVQDGGDFRVQLESWPDADLITLGLSQEEVNAIKGFFVGDLPAVANLLASSVWIKQLLGTGV
Ga0184628_102486033	3300018083	Groundwater Sediment	MAIVQAGRVFTADDVKRTAGNIATILTDGIEQGNAFRIQLESWPDADMVTLGLSQEEVNALKGFFVGDLPALATLLSQSVWIKQLLGTGV
Ga0190274_101921542	3300018476	Soil	MAIVQAGKQFTAADLKNSAGMVAAQLTQAAESGLGMKAQLESSPDPDLIALGLSQEEVNALKGFYVGDLPAIAAQLQASTWIKQLLGTGI
Ga0190274_105855322	3300018476	Soil	MIITAGKPVTADSLKATAGNLATLIRDYVQDGNDFRVQLESWPDSELVVLGLTQEEVNAIKGFYVGDLPAITNAIQGSVWIKQLLGVGV
Ga0190274_119656752	3300018476	Soil	MPITQAGKQFTAADLKTTAGSLASFLTDTAKNGLDFKMQLETWPDADLIDMGLTQDEINAIKGFYVGDLPAIAAGLQASTWIKQLLGTGV
Ga0190274_122770262	3300018476	Soil	MPIVQAGKQFTSDDVKRTAGTLAALLMQAVEDGQGFRVQLESWPDADLIELGLAQEEVNAIKGFYVGDLPAIAALLQQSAWIKQLLGTGV
Ga0190271_103763062	3300018481	Soil	MPITQAGKQFTAADLKATGGNLASFLRDTVQDLLDFGKQLETMTDEDLIALGLTQNEINAQKGFVLGDVPPIAALVEASTWIKQLLGTGV
Ga0173481_102169052	3300019356	Soil	VKRTAGNVAGLIRDYVQDGLDFRTQLESWPDADMLALGLSQEEVNAIKGFFIGDLPAVAAQLQASAWIKQLLGTGV
Ga0173481_106256371	3300019356	Soil	TAGDLATVLLSITQDGDDFRVQLESWPDADLILLGLTQEEVNAIKGFYVGDLPAVFASVRASTWIKQLVGTGV
Ga0173479_100510314	3300019362	Soil	MPITQAGRQFNAADIKKTAGDLATVLLSITQDGDDFRVQLESWPDADLILLGLTQEEVNAIKGFYVGDLPAVFASVRASTWIKQLVGTGV
Ga0173479_100865682	3300019362	Soil	MPITQAGRQFTAADIKRLAGDIAALLLNTTQDGGDFRVQLESWPDADLVLLGLTQEEVNVIKGFYVGDLPAITAQLQASSWIKQLVGTGV
Ga0193740_10055492	3300020009	Soil	MPITQAGKQFTSADLKATAGNLAALLLGVTQDGGDFSTQLQSWPDADLVTLGLSQDEINAIKGFFVGDLPAIAASLQASTWIKQLVGLGV
Ga0193740_10122541	3300020009	Soil	MPIVQAGKPVSADSIKATAGNVATMIRDYVQDGIDFKVQLESWPDADLLALGLSQEEVNAIKGFFVGDLPAIAAQIQASVWIKQLLGTGV
Ga0193740_10635072	3300020009	Soil	MPITQAGKQFTAADLKATAGNLAAMLTGIAQDGLDFKVQLETWPDADLIELGLSQDEINAIKGFYVGDLPAIAAALQASTWVKQLLGTGV
Ga0193738_100022934	3300020020	Soil	MPITQAGKQFTAADLKATAGNLAALLLGVTQDGGDFATQLQSWVDADLVTLGLSQDEINAIKGFYVGDLPAIAAALQASTWIKQLVGLGV
Ga0193738_10075093	3300020020	Soil	MPITQAGKQFTAADLKTTAGTLASMLRDITQDGLDFKTQLETWPDADLITLGLTQDEVNAIKGFYVGDLPAIAAALQASTWIKQLIGTGV
Ga0247788_10201901	3300022901	Soil	MPITQAGKQFTAADLKTTAGNLAAMLTGVAQDGLDFKRQLETWPDADLIELGLTQDEINAIKGFFVGDLPAVAAALQASTWVKQLLGTGV
Ga0247768_11886761	3300022910	Plant Litter	MPITQAGKPFTTFDIKLTAGNLATRLRDAAQDGLNFKAQLETWPDADLIEMGLTQDEVNAIKGFYVGDLPAIAGAISASTWIKQLLGTSV
Ga0247777_100006016	3300022917	Plant Litter	MIVQAGKQFSNLQLKDTAGTIATSIRDAVQNGMDLKVQLESWPDADLIELGLTQPEIDAMKGFYVGDLPGIAASLQASTWIKQLLGLGV
Ga0247756_10547522	3300023078	Plant Litter	MPITQAGRQFTAVDIKRLAGDIAALLLNTTQNGGDFRVQLESWPDADLVLLGLTQEEVNVIKGFYVGDLPAIAAQLQASSWIKQLVGTGV
Ga0247748_10501122	3300023168	Soil	QFTAADIKRLAGDIAALLLNTTQDGGDFRVQLESWPDADLVLLGLTQEEVNVIKGFYVGDLPAITAQLQASSWIKQLVGTGV
Ga0247784_11864052	3300023270	Plant Litter	DDIKRTAGSIASFLLDTAQSGGDFRVQLESWPDADLILMGLTQEEVNAIKGFYVGDLPAITAQLQASTWIKQLVGVGV
Ga0247660_10707221	3300024317	Soil	MAIIQAGKQFTQDDLQRQAGDIAAAIRNTIQQGGNFKLQLESWPDADLVALGLDQEEVNAIKGFFVGDLPALQNALASSTWIKQLLGLG
Ga0207697_100783521	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MPIVMAGKTFTKDDLKNTAGNTAQNIRNNIQLGLNLKVQLESWPDADLVALGLTPDEVNAIKGFYVGDLPAIADLLAQSAWIKQLLGTGL
Ga0207701_100136756	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MAIVQAGKTFTKDDLKQTAGNLAALIRDHVQSGLDFKTQLESWPDADLVALGLAQDEINAIKGFFVGDLPAIANSLAASTWIKQLLGTGV
Ga0207701_110991134	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	TKDDLQRQAGELAAAIRNTIQNGGNLKLQLESWPDSDLVELGLDQAEINAIKGFYVGDLPALQSALAASTWIKQLLGLG
Ga0207683_116497972	3300026121	Miscanthus Rhizosphere	MAIVQAGRPVTAEGIKMTAGDVATKIRNNILDGEDFRRQLESWPDADLITLGLSQEQIDAIKGFYVGDLPQLTATLQASTWILKLLGVGVATLPPPFGPPVI
Ga0208685_100019017	3300027513	Soil	MALTQAGRPFTADDIQNTAGSLATLLRDAVARGGHFRVQLESWPDGDLITLGLTQEEINAIKGFFVGDLPAMTALVQQSVWIKQLLGTGV
Ga0208185_100034216	3300027533	Soil	MAMVQAGRQFTADDLKRTAGNLASVITDTVQNGSDFRVQLESWPDADLVALGLSQEEINAIKGFFVGDLPAIAAQLQASTWIKQLLGLGV
Ga0208185_10602092	3300027533	Soil	MAIVQAGRPVTGDDVKMTAGRLATMIRDAMQDGNDFRVQLESWPDPDLMELGLTQPEINAIKGFYIGDLPQMTALLQASTWIKQLLGTGV
Ga0208185_11067151	3300027533	Soil	MAITQAGKQFTADDVQRTAGDLAAVLRDTVQRGNNFKVQLESWPEADLVELGLSLEDINAIKGFYVGDLPAITALVQSSVWIKQLLGTGV
Ga0209593_100007664	3300027743	Freshwater Sediment	VAIVQAGKQFTAADVKSTAGHVATMLSQFVEDGLGFKAQLESWPDADLIELGLSQSEINAVKGFYVGDLPAIAALLQGSSWVKQLLGTGV
Ga0209593_1000093419	3300027743	Freshwater Sediment	MAIVQAGKPVTADSIKATAGNLATLIRDSVQQGDAFRVQLESWPDADLIELGLDQADVNAIKGFYIGDLPQLKNTVAASAWIKQLLGTGV
Ga0209593_100030394	3300027743	Freshwater Sediment	MAIVQAGKQFTAADVKQTAGNLAASITDYVQMGGDFRVQLESWTEADLVALGLSLEEINAIKGFYVGDLPAIAAQLQASTWIKQLLGTGV
Ga0209593_100481533	3300027743	Freshwater Sediment	MAIIQAGKPFTADSLKATAGNLATLIRDYVQDGNDFRVQLESWPDSELVVLGLTQEEVNAVKGFFVGDLPAITNAIQGSVWIKQLLGTGV
Ga0209593_101497522	3300027743	Freshwater Sediment	MPITQAGKQFTSADLKTTAGNLASMLRDISQDGLDFKIQLETWPDVDLLDLGLTQDEINAIKGFFVGDLPAIASSIQASTWIKQLLGTGV
Ga0209593_101590232	3300027743	Freshwater Sediment	MAIVQAGKQFTADDLKRTAGNLADAITNNVQMGGDFRVQLESWTNEDLQALGLTLEEINAIKGFFVGDLPVIAAQLQASTWIKQLLGTGV
Ga0209974_103964412	3300027876	Arabidopsis Thaliana Rhizosphere	MALVQAGKQFTADDLRQTAGNVASLIRDYLQTGTDFRIQLESMPDADLVVLGLTQEQVNAIKGFYVGDVPAMANLFAASVWVKQLLGTGV
Ga0209486_102281372	3300027886	Agricultural Soil	MPITQAGKQFTSADLKATAGNLASFLTDTAQNGLEFKTQLETWPDADLIELGLAQDEINAIKGFFVGDLPAIASALQASTWIKQLLGTGV
Ga0207428_100346162	3300027907	Populus Rhizosphere	MAIIQAGRQFTAEQLQADAGSVAAMVRDAVQRADNLRAQLESWPDADLITLGLSQEEVNAMKGFYVGDMPAIRDLLKASTWMKQLLGTGL
Ga0207428_100368826	3300027907	Populus Rhizosphere	FTAEDLHRTAGAVATQIRDAVQNGNDFRIQLESWPDGDLILLGLTQEEVNAVKGFFVGDLPAISAQLAASVWVKQLLGTGV
Ga0207428_100861303	3300027907	Populus Rhizosphere	MAIVQAGKQFTAENVQSTAGEVAARIRDAIADGDHFRIQLESWPDADLITLGLSQEEVNAIKGFYVGDLPALGALLAQSVWVKQLLGTGV
Ga0207428_107027503	3300027907	Populus Rhizosphere	AGKQFTADQVQQTAGMLASMILQAVQQGGNFRVQLESWPDADLVEMGLSQEEVNAIKGFYVGDLPAIAALLSQSVWMKQLVGTGV
Ga0207428_109353802	3300027907	Populus Rhizosphere	MPITQAGKQFTSADLKTTAGNLASMLRDVSQDGLDFKAQLETWPDAELVTMGLTQDEINAIKGFYVGDLPAIASALQASTWIKQLLGTGV
Ga0247749_10159422	3300027993	Soil	MPITQAGKQFTAADLKATAGNLAALLTGVAQDGLDFKTQLETWPDADLIELGLTQDEINAVKGFYVGDLPAIAAALQASTWIKQLLGTGV
Ga0307322_101240853	3300028710	Soil	PITQAGKSFTAADIKQTAGSLASTLRDFTQNGLDFKAQLETWPDADLILLGLTQDEVNAIKGFYVGDLPPIAADLQASTWIKQLLGTGV
Ga0307497_100640862	3300031226	Soil	MAIVQAGRQFTDEDVQRSAGDLASGLRDILQRADAFRVQLESWPDADLITLGLAQDEINAIKGFYVGDVPTMLNAFKASTWVKQLLGTGVY
Ga0310904_112578561	3300031854	Soil	MAIVQAGHKFTAEDLHRTAGAVATQIRDAVQNGNDFRIQLESWPDGDLILLGLTQEEVNAVKGFFVGDLPAISAQLAASVWLKQLLGTGV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F043488

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences