NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F043501

Metagenome / Metatranscriptome Family F043501

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F043501
Family Type Metagenome / Metatranscriptome
Number of Sequences 156
Average Sequence Length 48 residues
Representative Sequence MDTTATSFTLRKNAKRAAEAMIRKGTAPAVDYGIKPSDDGRFEIVWKTV
Number of Associated Samples 117
Number of Associated Scaffolds 156

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 99.04 %
% of genes near scaffold ends (potentially truncated) 63.46 %
% of genes from short scaffolds (< 2000 bps) 61.54 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (53.205 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(38.462 % of family members)
Environment Ontology (ENVO) Unclassified
(44.872 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(69.231 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 18.18%    β-sheet: 18.18%    Coil/Unstructured: 63.64%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 156 Family Scaffolds
PF02738MoCoBD_1 7.69
PF03237Terminase_6N 4.49
PF13561adh_short_C2 3.85
PF01555N6_N4_Mtase 1.28
PF02195ParBc 1.28
PF00296Bac_luciferase 1.28
PF13458Peripla_BP_6 0.64
PF00078RVT_1 0.64
PF13701DDE_Tnp_1_4 0.64
PF00378ECH_1 0.64
PF03692CxxCxxCC 0.64
PF03446NAD_binding_2 0.64
PF00144Beta-lactamase 0.64
PF13361UvrD_C 0.64
PF00248Aldo_ket_red 0.64
PF01638HxlR 0.64
PF04909Amidohydro_2 0.64
PF02735Ku 0.64
PF13374TPR_10 0.64
PF01548DEDD_Tnp_IS110 0.64
PF03006HlyIII 0.64
PF01068DNA_ligase_A_M 0.64
PF00561Abhydrolase_1 0.64

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 156 Family Scaffolds
COG0863DNA modification methylaseReplication, recombination and repair [L] 1.28
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 1.28
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 1.28
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 1.28
COG1272Predicted membrane channel-forming protein YqfA, hemolysin III familyIntracellular trafficking, secretion, and vesicular transport [U] 0.64
COG1273Non-homologous end joining protein Ku, dsDNA break repairReplication, recombination and repair [L] 0.64
COG1423ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) familyReplication, recombination and repair [L] 0.64
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.64
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.64
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.64
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 0.64
COG2367Beta-lactamase class ADefense mechanisms [V] 0.64
COG3547TransposaseMobilome: prophages, transposons [X] 0.64

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms53.21 %
UnclassifiedrootN/A46.79 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002245|JGIcombinedJ26739_101009133Not Available717Open in IMG/M
3300003505|JGIcombinedJ51221_10311838All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium640Open in IMG/M
3300004082|Ga0062384_100169195All Organisms → cellular organisms → Bacteria → Proteobacteria1259Open in IMG/M
3300005179|Ga0066684_10816973All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium615Open in IMG/M
3300005436|Ga0070713_101894385All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium578Open in IMG/M
3300005437|Ga0070710_10340860Not Available989Open in IMG/M
3300005454|Ga0066687_10417026All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium779Open in IMG/M
3300005456|Ga0070678_101035975All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300005566|Ga0066693_10413958All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium549Open in IMG/M
3300005569|Ga0066705_10785342Not Available569Open in IMG/M
3300005921|Ga0070766_10253416Not Available1117Open in IMG/M
3300006176|Ga0070765_101074418All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium760Open in IMG/M
3300006176|Ga0070765_101209677All Organisms → cellular organisms → Bacteria → Proteobacteria713Open in IMG/M
3300006755|Ga0079222_10798388All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium770Open in IMG/M
3300006797|Ga0066659_11557985All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium554Open in IMG/M
3300006800|Ga0066660_11296349All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium570Open in IMG/M
3300006800|Ga0066660_11531043All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium526Open in IMG/M
3300007788|Ga0099795_10528364All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300010048|Ga0126373_10546934All Organisms → cellular organisms → Bacteria1205Open in IMG/M
3300010048|Ga0126373_12981892All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium528Open in IMG/M
3300010325|Ga0134064_10272688All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium634Open in IMG/M
3300010376|Ga0126381_100622057All Organisms → cellular organisms → Bacteria1538Open in IMG/M
3300010401|Ga0134121_12657590Not Available545Open in IMG/M
3300011271|Ga0137393_10783723All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium815Open in IMG/M
3300012683|Ga0137398_10232570All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1224Open in IMG/M
3300012683|Ga0137398_11068641All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium557Open in IMG/M
3300012917|Ga0137395_10062463All Organisms → cellular organisms → Bacteria2380Open in IMG/M
3300012924|Ga0137413_11310540All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium582Open in IMG/M
3300012927|Ga0137416_11410579Not Available631Open in IMG/M
3300012961|Ga0164302_10337022All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1002Open in IMG/M
3300014325|Ga0163163_12971995All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium529Open in IMG/M
3300018433|Ga0066667_11823898All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium551Open in IMG/M
3300020199|Ga0179592_10027660All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2549Open in IMG/M
3300020579|Ga0210407_11411195All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium516Open in IMG/M
3300020581|Ga0210399_10961203All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium690Open in IMG/M
3300020582|Ga0210395_10159301All Organisms → cellular organisms → Bacteria1686Open in IMG/M
3300021086|Ga0179596_10669547Not Available526Open in IMG/M
3300021168|Ga0210406_10546712All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium910Open in IMG/M
3300021168|Ga0210406_10837714All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium697Open in IMG/M
3300021168|Ga0210406_11395283All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium500Open in IMG/M
3300021170|Ga0210400_11588636Not Available516Open in IMG/M
3300021178|Ga0210408_10361505Not Available1157Open in IMG/M
3300021401|Ga0210393_10361713All Organisms → cellular organisms → Bacteria → Proteobacteria1182Open in IMG/M
3300021403|Ga0210397_10592370All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium847Open in IMG/M
3300021405|Ga0210387_10061599All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3046Open in IMG/M
3300021405|Ga0210387_10304396All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1402Open in IMG/M
3300021405|Ga0210387_10641551All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium943Open in IMG/M
3300021405|Ga0210387_11720387All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium530Open in IMG/M
3300021407|Ga0210383_10805231All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium804Open in IMG/M
3300021407|Ga0210383_11059033All Organisms → cellular organisms → Bacteria → Proteobacteria686Open in IMG/M
3300021407|Ga0210383_11116288All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium665Open in IMG/M
3300021407|Ga0210383_11454148All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium568Open in IMG/M
3300021432|Ga0210384_10717171All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300021432|Ga0210384_11303440Not Available631Open in IMG/M
3300021432|Ga0210384_11565759All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium564Open in IMG/M
3300021474|Ga0210390_11616184All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium510Open in IMG/M
3300021479|Ga0210410_11433522All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium583Open in IMG/M
3300021559|Ga0210409_11014555Not Available704Open in IMG/M
3300022527|Ga0242664_1096160All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300022531|Ga0242660_1161490All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium593Open in IMG/M
3300025915|Ga0207693_10104532All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_112221Open in IMG/M
3300025915|Ga0207693_10494661Not Available955Open in IMG/M
3300025916|Ga0207663_11618408All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium521Open in IMG/M
3300025945|Ga0207679_11739952All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium570Open in IMG/M
3300026078|Ga0207702_10326657Not Available1462Open in IMG/M
3300026088|Ga0207641_11253495All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium742Open in IMG/M
3300026121|Ga0207683_10125774All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2304Open in IMG/M
3300026315|Ga0209686_1161796Not Available657Open in IMG/M
3300026345|Ga0257148_1004712Not Available952Open in IMG/M
3300026356|Ga0257150_1007077All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1500Open in IMG/M
3300026494|Ga0257159_1077780All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium574Open in IMG/M
3300026496|Ga0257157_1032035All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria869Open in IMG/M
3300026514|Ga0257168_1097788All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium653Open in IMG/M
3300026523|Ga0209808_1181804All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium743Open in IMG/M
3300026542|Ga0209805_1226121Not Available776Open in IMG/M
3300026547|Ga0209156_10221165Not Available894Open in IMG/M
3300027069|Ga0208859_1008971All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1089Open in IMG/M
3300027094|Ga0208094_102222All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300027603|Ga0209331_1022137All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1646Open in IMG/M
3300027684|Ga0209626_1110431All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium716Open in IMG/M
3300027701|Ga0209447_10089128All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae847Open in IMG/M
3300027767|Ga0209655_10119111Not Available878Open in IMG/M
3300027768|Ga0209772_10162696All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales702Open in IMG/M
3300027775|Ga0209177_10199476All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium711Open in IMG/M
3300027787|Ga0209074_10427191All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium561Open in IMG/M
3300027855|Ga0209693_10163680All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1098Open in IMG/M
3300027889|Ga0209380_10019369All Organisms → cellular organisms → Bacteria → Proteobacteria3850Open in IMG/M
3300027903|Ga0209488_10288226Not Available1227Open in IMG/M
3300028047|Ga0209526_10389763Not Available926Open in IMG/M
3300029636|Ga0222749_10107491All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1317Open in IMG/M
3300031231|Ga0170824_111326353All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1183Open in IMG/M
3300031740|Ga0307468_102486674All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium507Open in IMG/M
3300031754|Ga0307475_10884101All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium706Open in IMG/M
3300031771|Ga0318546_10512570All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300031860|Ga0318495_10393948All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300031912|Ga0306921_11482665All Organisms → cellular organisms → Bacteria → Proteobacteria742Open in IMG/M
3300031962|Ga0307479_10719316All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium977Open in IMG/M
3300031962|Ga0307479_11728405All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium579Open in IMG/M
3300031962|Ga0307479_12076424All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium516Open in IMG/M
3300032035|Ga0310911_10931637All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300032059|Ga0318533_10030731Not Available3480Open in IMG/M
3300032205|Ga0307472_100170157All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1618Open in IMG/M
3300033289|Ga0310914_10135444All Organisms → cellular organisms → Bacteria → Proteobacteria2158Open in IMG/M
3300033290|Ga0318519_10622168All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria657Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil38.46%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil11.54%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil7.05%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil7.05%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.41%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.13%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil3.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.21%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.21%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.56%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.28%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.28%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.28%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.28%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.64%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.64%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.64%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.64%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.64%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.64%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.64%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.64%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022527Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022531Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026345Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-AEnvironmentalOpen in IMG/M
3300026356Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-AEnvironmentalOpen in IMG/M
3300026475Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-AEnvironmentalOpen in IMG/M
3300026494Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-AEnvironmentalOpen in IMG/M
3300026496Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-AEnvironmentalOpen in IMG/M
3300026514Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-BEnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300027061Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027069Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)EnvironmentalOpen in IMG/M
3300027094Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF022 (SPAdes)EnvironmentalOpen in IMG/M
3300027104Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF024 (SPAdes)EnvironmentalOpen in IMG/M
3300027603Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027684Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027701Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027767Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027768Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027829Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031860Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ26739_10100913333300002245Forest SoilMETTATSFSTRSNAKRAAEQMIAKGVAPAVDYGIERRDNGRFEIVWKTALT
JGIcombinedJ51221_1013266213300003505Forest SoilMDPTASSFSTRSNAKRAAEQMIAKGTAPAVDYDIKPQQRAV*
JGIcombinedJ51221_1031183823300003505Forest SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPAADYGIKPSGDGRFEIVWKSAKIAP
Ga0062384_10016919513300004082Bog Forest SoilMHTTASRFTLRKNAKRAAEAMIRKGTAPAVDYVIKSSDNGRFEIVWETA
Ga0066684_1081697313300005179SoilMDSTASSFTLRKNAKRAAEAMIRKGTAPAIDYDINPSDNGRFEI
Ga0070713_10189438523300005436Corn, Switchgrass And Miscanthus RhizosphereVDTTASSFTARNNAKRAAEKMIANGKAPAVDYGIRPRDDGRFEIVWKTVPTTGEVET
Ga0070710_1034086023300005437Corn, Switchgrass And Miscanthus RhizosphereMDTIASRFTLRKNAERAARAMIREGTAPAVDYGIKSSDDGFEI
Ga0066687_1041702623300005454SoilMDTTVSSFTLRKNAKRAAEAMIRKGTAPAIDYGIRPSANGRFEIVWKTAKA
Ga0070678_10103597523300005456Miscanthus RhizosphereMDTTASSFTLRKNAKRAAEAIIRTGTAPAVDYDISPSGNGRFEIVWKTVKA
Ga0066693_1041395823300005566SoilMDTTVSSFTLRKNAKRAAEAMIRKGTAPAIDYGIKPSDNGRFEIVWKTAK
Ga0066705_1078534223300005569SoilMDATASRFTLRKNAERAARTMIRKGTAPAADYGIKSSDAGFEIVWKIAK
Ga0070762_1057497533300005602SoilMDTTASSFTLRKNAKRAADAMIRKGTAPAADYGIKQW
Ga0066905_10165082323300005713Tropical Forest SoilMDTNANSFSNRGNARRAAEAMITKGTAPAVDYGVKP
Ga0070766_1020688313300005921SoilMDDTASSFSTRSNAKRAAEQMIAKGTAPAVDYGIKPRDDGRFE
Ga0070766_1025341613300005921SoilMDTTASRFTLRKNAERAARAMIRKGTAPAVDYGIKSSDDGFEIV*
Ga0070765_10094348713300006176SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPAADYGIKQWRWAV*
Ga0070765_10107441813300006176SoilMDTTASSFTARNNAKRAAKKMIANGKAPAVDYGIRPRDDGRFEIVWKTA
Ga0070765_10120967723300006176SoilMDTTASSFTLRKNAKRAAEAMIRKGIAPAVDYGIKLSDDGRFEIVWKIATFAPT
Ga0079222_1024239613300006755Agricultural SoilMDITASSFTLRKNAKRAAEAMIRKGSAPAVDYDIN
Ga0079222_1079838823300006755Agricultural SoilMDTTASSFTLRKNAKRAAEAMIRNGTAPAVDYDINPSGNGRFEIVWKTVK
Ga0066659_1155798523300006797SoilMDTTASSFTLRKNAKRAAEAIIRTGTAPAVDYDINPSGNGRFEIVWKTVKA
Ga0066660_1129634913300006800SoilMDITASSFTLRKNAKRAAEAMIRKGIAPAVDYGIKLSDDGRFEIVWKI
Ga0066660_1153104323300006800SoilMDTTVSSFTLRKNAKRAAEAMIRKGTAPAIDYGIKPSANGRFEIVWKTAEGRTGH*
Ga0099795_1052836423300007788Vadose Zone SoilMDSTASSFTLRKNAKRAAEAMIRKGTAPAIDYDINPSGNGRFEIVWKTAKTV
Ga0099792_1016185023300009143Vadose Zone SoilMDTTASRFTLRKNAERAARAMIRKGTAPAVDYGIKSS
Ga0099792_1110199013300009143Vadose Zone SoilMDTTPSSFTARSNAKRAAEKMIANGKAPAVDYGIRPRDDGRFEIVWKTVPT
Ga0126373_1054693423300010048Tropical Forest SoilMDTTASSFSTRSNAKRAAAQMLAKGTAPSVDYCIKPRGNGRFEIIWKTARTTGEVETQIAAA
Ga0126373_1298189223300010048Tropical Forest SoilMDTTASSFSTRSNAKRAAEQMLVKGTALAVDYCIKPRGNGRFEIIWKTARTTGEVETQIAAA
Ga0134084_1032058313300010322Grasslands SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPAVDYGIRPSDDGRFE
Ga0134064_1027268813300010325Grasslands SoilMDTTGSSFTARNNAKRAAEKMIANGKAPAVDYGIRPRDDGRFEIVWKTAPTNGEVEAE
Ga0126381_10062205743300010376Tropical Forest SoilMDTTASSFSSRSNAKRAAEQMLVKGTALAVDYCIKPRGNGRFEIIWKTARTTGAVE
Ga0134121_1265759013300010401Terrestrial SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPAVDYDISPSGNGRFEIVWKTV
Ga0137393_1078372313300011271Vadose Zone SoilMDPTASSFSTRSNAKRAAEQMIAKGTAPAVDYGIKPSNGRFEVVWKTALTTAEFAETA
Ga0137399_1046711813300012203Vadose Zone SoilMDTTASSFTLRKNAKRAAEAMIRNGTAPAVGYDINPSGN
Ga0137358_1023921213300012582Vadose Zone SoilMDDTASSATFSSRGNAKRAAEKMITAGTAPALDYGIKPRDDGRFEIVWKTAAKASP
Ga0137398_1023257013300012683Vadose Zone SoilMGEQMDATASNFSNRSNAKRAAEKMIAKGTAPTVDYGIKPSDDGRFEIVWKTALTTAEFSETTE
Ga0137398_1094569213300012683Vadose Zone SoilMDTTATSFSTRSNAKRAAEQMIAKGIAPAVDYGIERRDN
Ga0137398_1103654613300012683Vadose Zone SoilMDTTASSFTLRKNAKRAAEAMIRKGIAPAVDYGIKLSDDGRF
Ga0137398_1106864113300012683Vadose Zone SoilMDPTASSFSTRSNAKRAAEQMIAKGTAPTVDYGIKPSDDGRFEIVWKTALTTA
Ga0137395_1006246313300012917Vadose Zone SoilMDATASNFSNRSNAKRAAEKMIAKGTAPTIDYGIKPSDDG
Ga0137413_1131054013300012924Vadose Zone SoilMDGTASRFSTRSNAKRAAEQMIAKGTAPAVDYGIKPSNGRFGVVWKTALTA
Ga0137416_1141057923300012927Vadose Zone SoilMDTTASRFTLRKNAERAARAMIRKGTAPAVDYGIKSSDDGFEIVWK
Ga0164299_1032928713300012958SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPAVDYGIKPSDDGRF
Ga0164302_1033702223300012961SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPAVDYDINPSGNGRFEIVWKTVKAA
Ga0163163_1297199513300014325Switchgrass RhizosphereMDTTASSFTLRKNAKRAAEAMIRKGTAPAVDYDINLSGNGRFEIVWKNRQGRTNL*
Ga0182032_1113603323300016357SoilMHTTACSFTLRKNAKRAAEAKIRKGTAPAVDYAVKPQRI
Ga0182040_1183945723300016387SoilMHTTACSFTLRKNAKRAAEAKIRKGTAPAVDYAVKP
Ga0066667_1182389813300018433Grasslands SoilMDTTGSRFTLRKNAKRAAEAIIRKGAAPAVDYVIEPSANGRFDIV
Ga0179592_1002766043300020199Vadose Zone SoilMDATASNFSNRSNAKRAAEKMIAKGTAPTVDYGIKPSDDGRFEIVWKTALTTAEFSET
Ga0210407_1037804433300020579SoilMDTTPSSFTARNNAKRAAEKMIANGKAPAVDYEIRPRDDGRFEIVWKTVPTTGE
Ga0210407_1141119523300020579SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPAVDYDINPSGNGRFEIVWKTVKA
Ga0210403_1110572713300020580SoilMDTTASRFTLRKNAKRAAEAMIRKGTAPAVDYDISPSGN
Ga0210399_1011508033300020581SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPAVDYDINP
Ga0210399_1039069323300020581SoilMDTTTSSFTARKNAKRAAEKMIANGKAPAVDYGIRPRDDGRFEIVWKT
Ga0210399_1041562113300020581SoilMHTIACSFTLRKNAKRAAETMIRKGTAPAVDYAVE
Ga0210399_1056289623300020581SoilMDTNASSFTARKNAKRAAEKMIANEKAPAVDYGIRPRDDGRFEIVWKTAPTIGEVEAST
Ga0210399_1073108923300020581SoilMDDTAVCSNFSTRSNAKRAAEKMIGDGTAPAVDYRIKP
Ga0210399_1096120313300020581SoilMYTTAASFTARNNAKRAAEKMIANGKAPAVDYGIRPRDDGRFEIVWK
Ga0210395_1015930133300020582SoilMDTTASSFTARNNAKRAAEKMIANGKAPAVDYGIRPRDDGRFEIIWKTVPTTGEV
Ga0210401_1013620823300020583SoilMDPTASSFSTRSNAKRAAEQMIAKGTAPAVDYDIKPQQRAV
Ga0210401_1015119253300020583SoilMDTTASSFTARNNAKRAAEKMIANGKAPAVDYGIRPRDDGRFEIVWKTVPTTGEVETET
Ga0179596_1066954723300021086Vadose Zone SoilMDTTATSFSTRSNAKRAAEQMSAKGVAPAADYGIERRDNGRFEIVWKTALAFAE
Ga0210406_1054671223300021168SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPSVDYGIKPSDDGRFEIVWKNATTAPT
Ga0210406_1083771413300021168SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPAVDYGIEPSDNGRFE
Ga0210406_1139528313300021168SoilMYTTAASFTARNNAKRAADKMIAKGTAPGGDYGIVHRNDGRFEIVWKSAPITG
Ga0210400_1158863613300021170SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPSVDYGIKPSDDGRFEI
Ga0210408_1036150513300021178SoilMDATASSFSNRSNAKRAAEQMIAKGTALAVDYDIKPSNGRFEIVWKTGLTTAEFAE
Ga0210396_1157079323300021180SoilMDATASSFSTRSNAKRAAEQMIAKGTAPTVDYGIKPSNGPF
Ga0210396_1165511213300021180SoilMDTTASSFTAPKNAKRAAEKMIADGKAPAVDYGIRPRDDGRFEIVWKI
Ga0210388_1083362223300021181SoilMDTTASSFTLRNNAKRAAEAMIRKGIAPAVDYGINPTSP
Ga0210393_1036171313300021401SoilMNTTASSFTLRKNAKRAAEAMIRNGTAPAVDYDINPSGNGRFEIVWKTVKAAP
Ga0210397_1059237023300021403SoilMDTTASSFTLRKNAKRAAEAVIRKGTAPAADYDINPSGDGRFEIVWKSAKIAPTT
Ga0210387_1006159953300021405SoilMDTTASSFTLRKNAKRAAEAMIRKGIAPAVDYGIKLSDDGRSEIVW
Ga0210387_1030439623300021405SoilMDTTASRFTLRKNAERAARAMIRKGIAPAVDYGIKSSDD
Ga0210387_1064155143300021405SoilMDTTASSFTARKNAKRAAEKMIADGKAPAVDYGIRPRDDGRFEIVWKTAPTTGEVETEI
Ga0210387_1172038713300021405SoilMDTTASSFTLRKNAKRAAEAMIRKGIAPAVDYGIKLSDDGRFEIVWKTAETAPTTDE
Ga0210383_1080523113300021407SoilMDTTASSFTARKNAKRAAEKMIANGKAPAVDYGIRPRDDGRFEIVWKTAPTTGEVETE
Ga0210383_1105903323300021407SoilMDTTASRFTLRKNAERAARAMIRKGIAPAVDYGIKSSDDGFEIVWKIAKTAPT
Ga0210383_1111628813300021407SoilMYTTAASFTARNNAKRAAEKMIANGKAPAVDYGIRPRDDGRFEIVWKTAPTTGEVE
Ga0210383_1136457913300021407SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPAADYGIKPSG
Ga0210383_1145414813300021407SoilMDTTASSFTARKNAKRAAEKMIADGKAPAVDYGIRPRDDGRFEIVWKKALTNGEI
Ga0210394_1146372013300021420SoilMDDTASSFSTRSNAKRAAEQMIAKGTAPAVDYGIKPR
Ga0210384_1071717113300021432SoilMDTTASSFTARNNAKRAAEKMIANGKAPAVDYGIRPRDDGRFEIVWKTVPTTGEV
Ga0210384_1130344013300021432SoilMDTTASSFTLRRNAKRAAEAMIRKGIAPAVDYGIKLSDDGRFEIVWKTVKAA
Ga0210384_1156575913300021432SoilMDTTASSFTLRKNAKRAAEAMIRKGIAPAVDYGIKLSDDGRFEIVWKI
Ga0210390_1161618413300021474SoilMDTTASSFTAPKNAKRAAEKMIADGKAPVVDYGIRPRDDGRFEIVWKIAPTTGEVET
Ga0210402_1129360713300021478SoilMDTTASSFTLRKNAKRAAEAMIRKGIAPAVDYGIKLS
Ga0210402_1151216513300021478SoilMDTTASSFTLRKNAKRAAEAMIRKGIAPAVDYGIK
Ga0210402_1192929023300021478SoilMNTTASSFTLRKNAKRAAEAMIRNGTAAAVDYNINP
Ga0210410_1143352213300021479SoilMDDTASSFSTRSNAKRAAEQMIAKGTAPAVDYGIKPRDDGRFEIVWKAAAAAPISGEVE
Ga0210409_1101455513300021559SoilMDATASSFSNRSNAKRAAEQMIAKGTALAVDYDIKPSNGRFEIVWKTGLTTA
Ga0242664_109616023300022527SoilMNLCTSFTLRKNAKRAAEAMIRKGIAPAVDYGIKLSDDGRFEIA
Ga0242660_116149013300022531SoilMDTTASSFTACKNAKRAAEKMIANGTAPAVDYGIERREDGGLRFNIPNERAGR
Ga0207693_1010453223300025915Corn, Switchgrass And Miscanthus RhizosphereMDTTASSFTLRKNAKRAAEAMIRKGIAPAVDYGIKLSDDGRFEIVW
Ga0207693_1049466113300025915Corn, Switchgrass And Miscanthus RhizosphereMDTTASSFTLRKNAKRAAEAMIRKGTAPSVDYGIKPSDDGRFEIVWKNATTAPTANE
Ga0207663_1161840823300025916Corn, Switchgrass And Miscanthus RhizosphereMDATASSYSTRSNAKRAAEQMIAKGTAPAVDYGIKPSNGRFGVVWKTALTAAEFAETA
Ga0207679_1173995213300025945Corn RhizosphereMDTTASSFTLRNNAKRAAEAMIRKGTAPAVDYDISPSGNGRFEIVWKTVKAAPTSDEV
Ga0207702_1032665723300026078Corn RhizosphereMDTTASSFTLRKNAKRAAEAMIRKGTAPAVDYDISPSGNGRFEIVWKTVKAAPTSD
Ga0207641_1125349523300026088Switchgrass RhizosphereMDTTASSFTAHKNAKRAAEKLSADGRAPAIEYGIRHRDDGRFAIVWKKAPTV
Ga0207683_1012577413300026121Miscanthus RhizosphereMDTTASSFTLRKNAKRAAEAMIRKGTAPAVDYGIKPSGDGRFEIVWKSAKTAPTTD
Ga0207698_1208480913300026142Corn RhizosphereMDTTASSFTLRKNAKRAAEAMIRKGTAPAVDYDISP
Ga0209686_116179613300026315SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPAVDYGIRPSDDGRFEIVWKSVKAAP
Ga0257148_100471223300026345SoilMDTTASRFTLRKNAERAARAMIRKGTAPAVDYGIKSSDDGFEIVWKI
Ga0257150_100707713300026356SoilMNTTASSFTLRKNAKRAAEAMIRNGTAPAVDYDINPSGNGRFEIVWKTV
Ga0257147_104427113300026475SoilMDDTASSATFSSRGNAKRAAEKMITAGTAPALDYGIKPRDDGRFEIVWKTAAK
Ga0257159_107778023300026494SoilMDTTASRFTLRKNAERAAPAMIRKGTAPAVDYGINSSDDGFEIVWKIAKTAP
Ga0257159_109779113300026494SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPAVDYDINPSSNERF
Ga0257157_103203523300026496SoilMDATASNFSNRSNAKRAAEKMIAKGTAPTIDYGIKPSDDGRFEIR
Ga0257168_109778823300026514SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPAVDYGINPSGNGRFEI
Ga0209808_118180413300026523SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPAVEYGIRPSDDGRFEIVWKSVKAAPTSD
Ga0209805_122612113300026542SoilMDTTATSFTLRKNAKRAAEAMIRKGTAPAVDYGIKPSDDGRFEIVWKTV
Ga0209156_1022116533300026547SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPAVDYGIRPSDDGRFEIVWKSVKAAPT
Ga0179593_113876723300026555Vadose Zone SoilMGEPMDATASNFSNRSNAKRAAEKMIAKGTAPTIDYGIKAQRRRAV
Ga0209729_100428433300027061Forest SoilMDSTASSFTLRKNAKRAAEAMIRKGTAPAVDYGIKPSDNGR
Ga0208859_100897123300027069Forest SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPAVDYGIKPSDDGRFEIVWKSAKTAPTTDEVET
Ga0208094_10222223300027094Forest SoilMDTNASSFTARKNAKRAAEKMIANEKAPAVDYGIRPRDDGRFEIVWKTAPTI
Ga0208095_100336413300027104Forest SoilMDATASSFSNRSNAKRAAERMIAKGTALAVDYDIKPSNGRFEIVW
Ga0209331_102213713300027603Forest SoilMDTTASSFTLRKNAKRAAEAMIRKGIAPAVDYGIKLSDDGRFEIVWKIATSAPTTD
Ga0209217_103085723300027651Forest SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPAVDYGIKPS
Ga0209626_111043113300027684Forest SoilMDTTASSFTLRKNAKRAAEAMIRKGIAPAVDYGIKLSDDGRFEIVWK
Ga0209447_1008912813300027701Bog Forest SoilMHTTASRFTLRKNAKRAAEAMIRKGTAPAVDYVIKSSDNGRFEIVWETAKTAPTTDEVE
Ga0209655_1011911113300027767Bog Forest SoilMDTTASSFTLRKNAKRSAEAMIRKGTAPAGDYVIKPSDNGRFEIVWKIAKTAPTTDEVET
Ga0209772_1016269623300027768Bog Forest SoilMDTTASSFTLRKNAKRAAEAMIRKGTSPAVDYGIKPSDNGRFEIVWKIAKTEPTTDE
Ga0209177_1019947613300027775Agricultural SoilMDSTASSFTLRKNAKRAAEAMIRKGTAPAVDYGIEPSDDGRFEIVWKTAKAAPAIHGV
Ga0209074_1042719113300027787Agricultural SoilMDTTASSFTLRKNAKRAAEAMIRKGSAPAVDYDINLSGNGRFEIVWKIVKAAP
Ga0209773_1007090623300027829Bog Forest SoilMDTTASSFTLRKNAKRSAEAMIRKGTAPAVDYDVNPSD
Ga0209693_1016368013300027855SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPAVDYDINPSSNGRFEIVWKTVTAAP
Ga0209275_1077926623300027884SoilMDTTASSFTARNNAKRAAEKMIANGKAPAVDYGIRPRDDGRFEIVWKTVP
Ga0209380_1001936943300027889SoilMDTTASSFTLRKNAKRAAEAMIRKGIAPAVDYGIKLSDDGRFEIVWKIAT
Ga0209380_1042323923300027889SoilMDTTASSFTARNNAKRAAEKMIANGKAPAVDYGIRPRDDGRFEIVWKTAPTTGEVETE
Ga0209488_1028822613300027903Vadose Zone SoilMDTTASRFTLRKNAERAARAMIRKGTAPAVDYGIKSSDDGFEIVW
Ga0209488_1041875513300027903Vadose Zone SoilMDTTVCSFTLRKNAKRAAEAMIRKGTAPAVDYGIEPS
Ga0209526_1038976323300028047Forest SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPSVDYGIKPSDDGRFEIVWKNATTAPTA
Ga0308309_1145263313300028906SoilMDTTASSFTLRKNAKRAADAMIRKGTAPAADYGIKQWRWAV
Ga0222749_1010749113300029636SoilMDTTASSFTLRKNAKRAAEAMIRKGSAPAVDYDINLSGNGRFEIVWKTVKAAPSSDE
Ga0170824_11132635323300031231Forest SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPAVDYGIRPSDDGRFEIVWKSVKAAPTTDEVET
Ga0318572_1024176923300031681SoilMVQTTKPSFSSRSNAKRAAEKMIVDGKAPAVDYAIRPCHDGRFEIIWKATRAAPT
Ga0307474_1021521623300031718Hardwood Forest SoilMDDTAVCSNFSTRSNAKRAAEKMIGNGTAPAVDYRIKPR
Ga0306917_1041045313300031719SoilMDDTAVCSNFSTRSNAKRAAEKMIGNGTAPAVDYRI
Ga0307469_1119990623300031720Hardwood Forest SoilMDTTASRFTLRKNAERAARAMIRKGIAPAVDYGIKS
Ga0307468_10248667423300031740Hardwood Forest SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPAVDYDISPSGNGRFEIVWKT
Ga0307475_1088410123300031754Hardwood Forest SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPAIDYGIKPKDDGRFETAWK
Ga0318546_1051257013300031771SoilMDITGTSFTLRKNAKRAAEAMIRKGTAAAIDYGIKPGDDGRFEIV
Ga0318495_1039394823300031860SoilMDITGTSFTLRKNAKRAAEAMIRKGTAAAIDYGIKPGDDGRFEIVWKTAKTAPTTDEIET
Ga0306921_1148266513300031912SoilMHTIACSFTLRKNAKRAAETIIRKGTAPAVDYAVEPSDDGRFKIVWKTAKAAP
Ga0310912_1101125523300031941SoilMHTTACSFTLRKNAKRAAEAKIRKGTAPAVDYAVKPSDNGRFK
Ga0307479_1071931623300031962Hardwood Forest SoilMDTTASSFTARNNAKRAAEKMIANGKAPAVDYGIRPRDDGRFEIVWKTVPT
Ga0307479_1172840523300031962Hardwood Forest SoilMDTTASRFTLRKNAERAARAMIRKGTASAVDYGIKSSDDGFEIVWKIAKTAPTTDE
Ga0307479_1207642413300031962Hardwood Forest SoilMGTTATFTLRKNAKRAAEAMIRKGTAPAIDYSIKHSDDGRFGIVWKTARTAPTIGEV
Ga0310911_1093163723300032035SoilMDITGSSFTLRKNAKRAAEAMIRKGTAAAIDYGIKPGDDGRF
Ga0318533_1003073113300032059SoilMDITGSSFTLRKNAKRAAEAMIRKGTAAAIDYGIKPGDDGRFEIV
Ga0307472_10017015713300032205Hardwood Forest SoilMDTTASSFTLRKNAKRAAEAMIRKGTAPAVDYDISPSGNGRFEIVWKTVKAAPTSDEVET
Ga0306920_10042256853300032261SoilMHTIACSFTLRKNAKRAAETIIRKGTAPAVDYAVE
Ga0310914_1013544413300033289SoilMDITGTSFTLRKNAKRAAEAMIRKGTAAAIDYGIKPGDDGRFEIVWKTAKTAPTTDE
Ga0310914_1046735533300033289SoilMDDTAVCSNFSTRSNAKRAAEKMIGNGTAPAVDYRIKPRDDGRFEIESKTNP
Ga0318519_1062216833300033290SoilMDITGSSFTLRKNAKRAAEAMIRKGTAAAIDYGIKPGDDGRFE

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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