Metagenome / Metatranscriptome Family F043587

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F043587
Family Type	Metagenome / Metatranscriptome
Number of Sequences	156
Average Sequence Length	63 residues
Representative Sequence	MVNYQTITALVNQIPAGTWDVLREIKERRPAMMLSELIECRRRALQEQVPPEPRS
Number of Associated Samples	83
Number of Associated Scaffolds	156

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	89.68 %
% of genes near scaffold ends (potentially truncated)	29.49 %
% of genes from short scaffolds (< 2000 bps)	89.10 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.897 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (35.256 % of family members)
Environment Ontology (ENVO)	Unclassified (59.615 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (75.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.17% β-sheet: 0.00% Coil/Unstructured: 57.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 156 Family Scaffolds
PF01636	APH	3.85
PF01965	DJ-1_PfpI	1.92
PF13763	DUF4167	1.92
PF13278	Obsolete Pfam Family	1.28
PF16868	NMT1_3	1.28
PF12760	Zn_Tnp_IS1595	1.28
PF07690	MFS_1	1.28
PF03466	LysR_substrate	1.28
PF00072	Response_reg	0.64
PF00293	NUDIX	0.64
PF06627	DUF1153	0.64
PF00034	Cytochrom_C	0.64
PF00732	GMC_oxred_N	0.64
PF00903	Glyoxalase	0.64
PF04542	Sigma70_r2	0.64
PF00665	rve	0.64
PF02350	Epimerase_2	0.64
PF13403	Hint_2	0.64
PF03372	Exo_endo_phos	0.64
PF01011	PQQ	0.64
PF00239	Resolvase	0.64
PF12762	DDE_Tnp_IS1595	0.64
PF05099	TerB	0.64
PF07883	Cupin_2	0.64
PF12697	Abhydrolase_6	0.64
PF01464	SLT	0.64

COG ID	Name	Functional Category	% Frequency in 156 Family Scaffolds
COG0381	UDP-N-acetylglucosamine 2-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.64
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.64
COG0707	UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase	Cell wall/membrane/envelope biogenesis [M]	0.64
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.64
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.64
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.64
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.64
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.64
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.64
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.64
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.64
COG3793	Tellurite resistance protein TerB	Inorganic ion transport and metabolism [P]	0.64
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.64
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.90 %
All Organisms	root	All Organisms	39.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.90 %
cellular organisms	root	All Organisms → cellular organisms	39.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.90 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.97 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.64 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22.44 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.64 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.64 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.90 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	7.05 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.41 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.92 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.64 %
Magnetococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales	0.64 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.64 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.05 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.92 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.28 %
Magnetococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae	0.64 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.64 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.64 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.64 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.64 %
Devosiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae	0.64 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.05 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.92 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.28 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	0.64 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.64 %
Devosia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia	0.64 %
Magnetococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus	0.64 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.64 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.64 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.05 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.92 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.28 %
Candidatus Magnetococcus massalia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Candidatus Magnetococcus massalia	0.64 %
Microvirga aerophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga aerophila	0.64 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.64 %
unclassified Devosia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → unclassified Devosia	0.64 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.64 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.64 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.05 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.92 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.28 %
Devosia sp. 66-22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → unclassified Devosia → Devosia sp. 66-22	0.64 %
Candidatus Magnetococcus massalia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Candidatus Magnetococcus massalia	0.64 %
Microvirga aerophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga aerophila	0.64 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.64 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.64 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.64 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104328750	Not Available	541	Open in IMG/M
3300002245\|JGIcombinedJ26739_100916852	Not Available	759	Open in IMG/M
3300004092\|Ga0062389_103113798	Not Available	621	Open in IMG/M
3300004267\|Ga0066396_10024246	Not Available	842	Open in IMG/M
3300004633\|Ga0066395_10876239	Not Available	542	Open in IMG/M
3300005187\|Ga0066675_10503939	All Organisms → cellular organisms → Bacteria → Proteobacteria	905	Open in IMG/M
3300005332\|Ga0066388_100524529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1817	Open in IMG/M
3300005332\|Ga0066388_100539127	Not Available	1798	Open in IMG/M
3300005332\|Ga0066388_101779583	Not Available	1094	Open in IMG/M
3300005332\|Ga0066388_104855155	Not Available	684	Open in IMG/M
3300005363\|Ga0008090_10111398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga aerophila	512	Open in IMG/M
3300005434\|Ga0070709_11151364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300005436\|Ga0070713_100460524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1195	Open in IMG/M
3300005436\|Ga0070713_101352330	Not Available	690	Open in IMG/M
3300005439\|Ga0070711_100139746	All Organisms → cellular organisms → Bacteria → Proteobacteria	1814	Open in IMG/M
3300005439\|Ga0070711_100653522	All Organisms → cellular organisms → Bacteria → Proteobacteria	882	Open in IMG/M
3300005764\|Ga0066903_100231209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2820	Open in IMG/M
3300005764\|Ga0066903_100873760	Not Available	1622	Open in IMG/M
3300005764\|Ga0066903_101079261	Not Available	1478	Open in IMG/M
3300005764\|Ga0066903_101414839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1307	Open in IMG/M
3300005764\|Ga0066903_102175057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1069	Open in IMG/M
3300005764\|Ga0066903_102699567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	963	Open in IMG/M
3300005764\|Ga0066903_105130776	Not Available	694	Open in IMG/M
3300005764\|Ga0066903_105282935	Not Available	683	Open in IMG/M
3300005764\|Ga0066903_106266311	Not Available	621	Open in IMG/M
3300005764\|Ga0066903_108317494	Not Available	530	Open in IMG/M
3300005921\|Ga0070766_11153522	Not Available	536	Open in IMG/M
3300006050\|Ga0075028_101065572	Not Available	506	Open in IMG/M
3300006172\|Ga0075018_10442090	Not Available	668	Open in IMG/M
3300006175\|Ga0070712_100112355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2035	Open in IMG/M
3300006175\|Ga0070712_100944765	Not Available	744	Open in IMG/M
3300006175\|Ga0070712_101666300	Not Available	558	Open in IMG/M
3300006176\|Ga0070765_100704883	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300006806\|Ga0079220_11114548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Candidatus Magnetococcus massalia	641	Open in IMG/M
3300006854\|Ga0075425_103002356	Not Available	516	Open in IMG/M
3300010043\|Ga0126380_10043404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2377	Open in IMG/M
3300010043\|Ga0126380_10501081	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300010046\|Ga0126384_10111126	Not Available	2043	Open in IMG/M
3300010046\|Ga0126384_10689922	Not Available	904	Open in IMG/M
3300010046\|Ga0126384_11603320	Not Available	613	Open in IMG/M
3300010046\|Ga0126384_11909155	Not Available	566	Open in IMG/M
3300010047\|Ga0126382_11190755	Not Available	682	Open in IMG/M
3300010048\|Ga0126373_10360014	All Organisms → cellular organisms → Bacteria → Proteobacteria	1469	Open in IMG/M
3300010048\|Ga0126373_10562260	Not Available	1189	Open in IMG/M
3300010048\|Ga0126373_10580864	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300010048\|Ga0126373_11211953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	821	Open in IMG/M
3300010048\|Ga0126373_11364865	Not Available	774	Open in IMG/M
3300010048\|Ga0126373_11858722	Not Available	665	Open in IMG/M
3300010048\|Ga0126373_11935760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	652	Open in IMG/M
3300010048\|Ga0126373_12412077	Not Available	586	Open in IMG/M
3300010359\|Ga0126376_10596671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1044	Open in IMG/M
3300010359\|Ga0126376_12353214	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300010360\|Ga0126372_10388162	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300010360\|Ga0126372_11073341	Not Available	822	Open in IMG/M
3300010361\|Ga0126378_10300010	All Organisms → cellular organisms → Bacteria	1710	Open in IMG/M
3300010361\|Ga0126378_10468162	Not Available	1375	Open in IMG/M
3300010361\|Ga0126378_10545966	Not Available	1274	Open in IMG/M
3300010361\|Ga0126378_11523698	Not Available	758	Open in IMG/M
3300010361\|Ga0126378_12021822	Not Available	657	Open in IMG/M
3300010361\|Ga0126378_12460133	Not Available	595	Open in IMG/M
3300010362\|Ga0126377_11070992	Not Available	874	Open in IMG/M
3300010362\|Ga0126377_11416826	Not Available	768	Open in IMG/M
3300010362\|Ga0126377_12926040	Not Available	551	Open in IMG/M
3300010366\|Ga0126379_12004020	Not Available	681	Open in IMG/M
3300010366\|Ga0126379_12309837	Not Available	638	Open in IMG/M
3300010366\|Ga0126379_12508465	Not Available	614	Open in IMG/M
3300010371\|Ga0134125_11180950	Not Available	836	Open in IMG/M
3300010375\|Ga0105239_11210450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	870	Open in IMG/M
3300010376\|Ga0126381_100196525	Not Available	2692	Open in IMG/M
3300010376\|Ga0126381_100356809	Not Available	2023	Open in IMG/M
3300010376\|Ga0126381_100644060	Not Available	1511	Open in IMG/M
3300010376\|Ga0126381_101359897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1026	Open in IMG/M
3300010376\|Ga0126381_101404873	Not Available	1009	Open in IMG/M
3300010376\|Ga0126381_102061711	Not Available	822	Open in IMG/M
3300010376\|Ga0126381_102164805	Not Available	800	Open in IMG/M
3300010376\|Ga0126381_103023735	Not Available	668	Open in IMG/M
3300010398\|Ga0126383_12334832	Not Available	620	Open in IMG/M
3300010398\|Ga0126383_13068575	Not Available	545	Open in IMG/M
3300010398\|Ga0126383_13081289	Not Available	544	Open in IMG/M
3300012202\|Ga0137363_11649615	Not Available	533	Open in IMG/M
3300012206\|Ga0137380_10553724	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1009	Open in IMG/M
3300012582\|Ga0137358_10636711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	714	Open in IMG/M
3300012930\|Ga0137407_11356325	Not Available	676	Open in IMG/M
3300012948\|Ga0126375_10788315	Not Available	751	Open in IMG/M
3300012948\|Ga0126375_10962041	Not Available	692	Open in IMG/M
3300012971\|Ga0126369_10661465	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1119	Open in IMG/M
3300012971\|Ga0126369_12880259	Not Available	563	Open in IMG/M
3300012989\|Ga0164305_11555666	All Organisms → cellular organisms → Bacteria → Proteobacteria	588	Open in IMG/M
3300015371\|Ga0132258_13713908	All Organisms → cellular organisms → Bacteria → Proteobacteria	1041	Open in IMG/M
3300015373\|Ga0132257_101539190	Not Available	849	Open in IMG/M
3300016270\|Ga0182036_11124898	Not Available	651	Open in IMG/M
3300016270\|Ga0182036_11782772	Not Available	521	Open in IMG/M
3300016341\|Ga0182035_12155991	Not Available	505	Open in IMG/M
3300016387\|Ga0182040_10008619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5125	Open in IMG/M
3300016387\|Ga0182040_11673674	Not Available	543	Open in IMG/M
3300016404\|Ga0182037_11162341	All Organisms → cellular organisms → Bacteria → Proteobacteria	677	Open in IMG/M
3300020579\|Ga0210407_10248897	Not Available	1384	Open in IMG/M
3300020580\|Ga0210403_10133367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2025	Open in IMG/M
3300020580\|Ga0210403_10288246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → unclassified Devosia → Devosia sp. 66-22	1345	Open in IMG/M
3300020580\|Ga0210403_10486340	All Organisms → cellular organisms → Bacteria → Proteobacteria	1003	Open in IMG/M
3300020581\|Ga0210399_10085296	All Organisms → cellular organisms → Bacteria → Proteobacteria	2569	Open in IMG/M
3300020581\|Ga0210399_10131127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2063	Open in IMG/M
3300020581\|Ga0210399_10228116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1551	Open in IMG/M
3300020581\|Ga0210399_11356414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	557	Open in IMG/M
3300020583\|Ga0210401_10039579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4472	Open in IMG/M
3300020583\|Ga0210401_10380595	Not Available	1273	Open in IMG/M
3300020583\|Ga0210401_10797559	Not Available	804	Open in IMG/M
3300021178\|Ga0210408_10438128	Not Available	1040	Open in IMG/M
3300021178\|Ga0210408_11339423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	541	Open in IMG/M
3300021180\|Ga0210396_10213884	Not Available	1719	Open in IMG/M
3300021180\|Ga0210396_11229155	All Organisms → cellular organisms → Bacteria → Proteobacteria	626	Open in IMG/M
3300021180\|Ga0210396_11345687	Not Available	592	Open in IMG/M
3300021404\|Ga0210389_10359716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1143	Open in IMG/M
3300021406\|Ga0210386_10955682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	732	Open in IMG/M
3300021407\|Ga0210383_10959744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	727	Open in IMG/M
3300021474\|Ga0210390_10203101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1676	Open in IMG/M
3300021478\|Ga0210402_11986525	Not Available	507	Open in IMG/M
3300021559\|Ga0210409_11103903	Not Available	668	Open in IMG/M
3300021560\|Ga0126371_10361481	Not Available	1588	Open in IMG/M
3300021560\|Ga0126371_10436454	Not Available	1454	Open in IMG/M
3300021560\|Ga0126371_10494907	Not Available	1370	Open in IMG/M
3300021560\|Ga0126371_10524162	Not Available	1333	Open in IMG/M
3300021560\|Ga0126371_10885123	Not Available	1037	Open in IMG/M
3300021560\|Ga0126371_11106414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	931	Open in IMG/M
3300021560\|Ga0126371_12648692	Not Available	608	Open in IMG/M
3300021560\|Ga0126371_12882463	Not Available	583	Open in IMG/M
3300025910\|Ga0207684_11235716	Not Available	617	Open in IMG/M
3300025915\|Ga0207693_10027598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4488	Open in IMG/M
3300025929\|Ga0207664_10272087	All Organisms → cellular organisms → Bacteria → Proteobacteria	1484	Open in IMG/M
3300025929\|Ga0207664_10581742	Not Available	1005	Open in IMG/M
3300025939\|Ga0207665_10103945	All Organisms → cellular organisms → Bacteria → Proteobacteria	1987	Open in IMG/M
3300027161\|Ga0208368_107377	Not Available	602	Open in IMG/M
3300027537\|Ga0209419_1017756	All Organisms → cellular organisms → Bacteria → Proteobacteria	1277	Open in IMG/M
3300027548\|Ga0209523_1106645	Not Available	580	Open in IMG/M
3300027651\|Ga0209217_1147949	Not Available	651	Open in IMG/M
3300027889\|Ga0209380_10131419	All Organisms → cellular organisms → Bacteria → Proteobacteria	1459	Open in IMG/M
3300030935\|Ga0075401_11658033	Not Available	744	Open in IMG/M
3300031057\|Ga0170834_104424234	All Organisms → cellular organisms → Bacteria → Proteobacteria	1581	Open in IMG/M
3300031231\|Ga0170824_102122549	All Organisms → cellular organisms → Bacteria → Proteobacteria	653	Open in IMG/M
3300031564\|Ga0318573_10704656	Not Available	543	Open in IMG/M
3300031573\|Ga0310915_10009766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5521	Open in IMG/M
3300031708\|Ga0310686_116489003	Not Available	1490	Open in IMG/M
3300031753\|Ga0307477_10450235	Not Available	878	Open in IMG/M
3300031754\|Ga0307475_10599739	Not Available	882	Open in IMG/M
3300031770\|Ga0318521_10813712	Not Available	570	Open in IMG/M
3300031793\|Ga0318548_10529551	Not Available	575	Open in IMG/M
3300031820\|Ga0307473_10135958	Not Available	1375	Open in IMG/M
3300031890\|Ga0306925_10237435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1965	Open in IMG/M
3300031912\|Ga0306921_10548067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1341	Open in IMG/M
3300031947\|Ga0310909_10027592	All Organisms → cellular organisms → Bacteria → Proteobacteria	4172	Open in IMG/M
3300031947\|Ga0310909_10085318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2512	Open in IMG/M
3300031947\|Ga0310909_10986331	Not Available	689	Open in IMG/M
3300031947\|Ga0310909_11287612	Not Available	588	Open in IMG/M
3300032044\|Ga0318558_10387489	Not Available	695	Open in IMG/M
3300032059\|Ga0318533_10038066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3152	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.44%
Host-Associated	Host-Associated	2.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.51%
Plants	Host-Associated → Plants	2.56%
Aquatic	Environmental → Aquatic	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.51%
Sediment	Environmental → Aquatic → Sediment	1.28%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.28%
Freshwater	Environmental → Aquatic → Freshwater	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.79%
Loam	Environmental → Terrestrial → Soil → Loam	23.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.28%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.28%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.64%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.64%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	35.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.21%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.28%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.28%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.64%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.64%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027161	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF032 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300030935	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1043287502	3300000364	Soil	MIDYQTITELVNQIPTDTWDVLREIKERRPAMMLSELIDYRRGALQRQEPSESRSQTNEPI*
JGIcombinedJ26739_1009168522	3300002245	Forest Soil	MVNYRTIMELVNQIPAGTWEVLREIKDRRPAMMLSELIECRRRALQEQERPEPRSQTARLSDTPSL*
Ga0062389_1031137981	3300004092	Bog Forest Soil	MVNYQTITALVNQIPAGTWDVLREIKERRPGIMLSELIGCRRRALQEQVPSEPRSQTARLADIPSL*
Ga0066396_100242462	3300004267	Tropical Forest Soil	MIDYQTIIALVNQIPTDTWDVLKQIKEYRPAMMLSELIECGTRPAKRSEPRSPKSEPV*
Ga0066395_108762392	3300004633	Tropical Forest Soil	MVNYQTIAALVNQIPADIWNVLREIKERRPGMMLSELIDCKRGALHQQEPRPRSPTDEPI
Ga0066675_105039391	3300005187	Soil	MVNYQTITALVNQIPAGAWDVLREIKERRPAMMLSELIECRRRALQEQVPPEPRSQTAKLCDTPSL*
Ga0066388_1005245292	3300005332	Tropical Forest Soil	MIDYQTISALVNQIPTDTWEVLREIKERRPAMMLSELIDCRRRELQQPKRLEPPSPTISAI*
Ga0066388_1005391272	3300005332	Tropical Forest Soil	MVNYQTISALVDQIPADIWEVLQEIKERRPAMMLLELINCRQRALQKQEPPELQSQTTSS
Ga0066388_1017795831	3300005332	Tropical Forest Soil	MVNYQTISALVDQIPADIWEVLQEIKERRPAMMLLELINCRRRALEKQEPPELQSQTTNSYGTPPL*
Ga0066388_1048551551	3300005332	Tropical Forest Soil	MVKYQTISALVNQIPADTWDVLREIKEHRPAMMLLELIDCRRRALQNQEPPELRSQTMNPHDTPPVMIPK*
Ga0008090_101113982	3300005363	Tropical Rainforest Soil	MVNYPTISALVDQIPADIWEVLQEIKERRPAMMLLELIDCRRRALQKQEPP*
Ga0070709_111513642	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MVNYQTIAALVNQIPVDTWDVLREIKQRRPAMMLSELIDCRRRTLQQQEPPEPRSPTNQTT*
Ga0070713_1004605242	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MVNYQTITALVNQIPAGTWDVLREIKERRPATMLSELIGCRTRALQEQGPSEPRSQTARPSD
Ga0070713_1013523302	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MVNYRTILELVNQIPAGTWDVLREIKERRPAMMLSELIECRRRTSQDKEPPEPRSQTARPPDIPSL*
Ga0070711_1001397463	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MVNYQTITALVNQIPAGTWDVLREIKERRPAMMLSELIGCRRRALQEQGPSEPRSQTARPSDTPSL*
Ga0070711_1006535222	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MVNYRTIMELVNQIPAGTWDVLREIKDRRPAMMLSELIECRRRALQEQERPEPRSQTARLSDTPSL*
Ga0066903_1002312094	3300005764	Tropical Forest Soil	MVNYQTISALVDQIPADIWDVLREIKERRPAMMLLELIDCRRRALQKQEPPEPR*
Ga0066903_1008737604	3300005764	Tropical Forest Soil	MANYPTISALVEQISADTWDVLREIKERRPAMMLLELIDCRRRASQKQGPPEPRSHSTNPHETPPL*
Ga0066903_1010792612	3300005764	Tropical Forest Soil	MIDYQTISALVDQIPADTWNVLREIKERRPAMMLLELIDCRRRALQKQEPPEPRSQTTNPHNTPRCDPPR*
Ga0066903_1014148392	3300005764	Tropical Forest Soil	MVKYQTISPLVNQILADTWDVLREIKEHRPAMMLLELIDCRRRALQNQEPPELRSQTMNRHDTPPVMIPK*
Ga0066903_1021750571	3300005764	Tropical Forest Soil	MIDYQTIAALVNQIPTDTWDVLKRIKERRPAMMLSELIECRTRPPERSEPRSSTIEPV*
Ga0066903_1026995672	3300005764	Tropical Forest Soil	VNYEAITALVNQISSDTWEVLQQIRERRPAMMLSELIDCRSRALREQKVPNPSSSADALS
Ga0066903_1051307761	3300005764	Tropical Forest Soil	MVKYQTISALVKQIPSDTWDVLREIKERRPAMMLLELIDYGRRALQNQELLPELRSQTINPHETPPL*
Ga0066903_1052829351	3300005764	Tropical Forest Soil	MVNYQTIAALVNQIPADIWNVLREIKERRPGMMLSELIDCRRGALQQEPEPRSPQTSLYDTPPL*
Ga0066903_1062663113	3300005764	Tropical Forest Soil	ISALVNQIPLDTWSVLLQLKERRPAMMLSELIDCRILASQQPERSELRAPTTEPA*
Ga0066903_1083174942	3300005764	Tropical Forest Soil	VVNYQTIEALVNQIPVDTWEVLREIKARRPAIMLSELIDCRGRALQQEAPAPPSPTNEPVSHTPL*
Ga0070766_111535222	3300005921	Soil	MVNYQTIAALVNQIPVDTWDVLREIKQRRPAMMLSELIDCRRRTLQQQEPPEPLLTKPT*
Ga0075028_1010655722	3300006050	Watersheds	MVNYQTITALVNQIPAGTWDVLREIKERRPAMMLSELIECRRRALQEQVPPEPRSQTARLSDTPSL*
Ga0075018_104420902	3300006172	Watersheds	MVNYQTIAALVNQIPVDTWDVLREIKQRRPAMMLSELIDCRRRTLQQQESPEPLLTKPT*
Ga0070712_1001123551	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MVNYQTITALVNQIPAGTWDVLREIKERRPAMMLSELIECRRRALQEQVPPEPRS
Ga0070712_1009447652	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LVNQIPAGTWDVLREIKERRPAMMLSELIEFRRRALQEQVPPEPRSQTARLTDTPSL*
Ga0070712_1016663001	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MVNYQTITTLLNQIPADTWDVLREIKERRPAMMLSELIDCRRRALKQQGLRSHHR*
Ga0070765_1007048831	3300006176	Soil	MVNYQTITALVNQIPAGTWDVLREIKERRPAMMLSELIECKRRALQEQVPPEPRSQTARLSDTPSL*
Ga0079220_111145482	3300006806	Agricultural Soil	MVNYQTISALINQIPADTWDVLREIRERRPAMMLLELIDCRQRALQKKEPPELTIANYEPT*
Ga0075425_1030023562	3300006854	Populus Rhizosphere	MIDYQTITALVNQIPTDTWDVLREIKERRPAMMLSELIDYRRGALQRQEPSESRSQTN
Ga0126380_100434042	3300010043	Tropical Forest Soil	MVKYQSITALVNQIPAATWDVLREIKERRPAMMLSELIECRRRALREPEPRS*
Ga0126380_105010811	3300010043	Tropical Forest Soil	MIDYQTISALINQIPADTWEVLREIKERRPAMMLSELIDCRRRELQQPKRLEPPSPTISAI*
Ga0126384_101111261	3300010046	Tropical Forest Soil	MANYPTISALVDQISADTWDVLQEIKERRPAMMLLELIDCRRRASQKQGPREPRSHPTNTHETPPL*
Ga0126384_106899222	3300010046	Tropical Forest Soil	SVILSKREDISMIDYQTIIALVNQIPTDTWDVLKQIKEYRPAMMLSELIECGTRPAKRSEPRSPKSEPV*
Ga0126384_116033201	3300010046	Tropical Forest Soil	MIDYQTISALINQIPADTWEVLREIKERRPAMMLSELIDCRRRELQQPKRLEPP
Ga0126384_119091552	3300010046	Tropical Forest Soil	MVNYQEIAALVNRIPTDAWEVLHEIKQRRPAMMLSELIDYRRRALQQQVPVELLSPKPNVSEPKTMAL*
Ga0126382_111907551	3300010047	Tropical Forest Soil	MVKYQTISALVDQIPSDTWDVLREIKERRPAMMLLELIDCRRRALQNQEPPELRSQTMNPHETPPL*
Ga0126373_103600141	3300010048	Tropical Forest Soil	MIDYQTIAALVNQIPTDTWDVLKRIKERRPAMMLSELIECRTRPPERSEPRSSTNEPV*
Ga0126373_105622602	3300010048	Tropical Forest Soil	LVNYQTISALVDQIPADTWDVLQEIKERRPAMMLLELIDCRRRALQKQEPP
Ga0126373_105808641	3300010048	Tropical Forest Soil	REDCRIVNYRTIAALVNQIPVDTWDVLLEIKERRPAIMLSELIDCRRRALQQTEPPEPRSPTMEPV*
Ga0126373_112119532	3300010048	Tropical Forest Soil	RMVNYQGSMALVNRIPTDTWEVLHEIKQRRPAMMLSELIDYRRRALQQQVPVELLSPKPNVSEPKTMAL*
Ga0126373_113648652	3300010048	Tropical Forest Soil	MIDYQTISALINQIPADTWEVLREIKERRPAMMLSELIDCKRRELQQLKRVEPPSPTSSAI*
Ga0126373_118587221	3300010048	Tropical Forest Soil	VVNYQTIAALVNQISADIWNVLREIKERRPGMMLSELIDCRRGALQQEPEPRSPTEEPI*
Ga0126373_119357602	3300010048	Tropical Forest Soil	MVNYQAIAALVNQIPADTWDVLRQIKERRPAMMLSELIECRRRALEQAEPPEPHSPTVEPV*
Ga0126373_124120771	3300010048	Tropical Forest Soil	MVNYQTISALVDQIPADIWEVLQEIKERRPAMMLLELINCRQRALQKQEPPELQSQTTNS
Ga0126376_105966712	3300010359	Tropical Forest Soil	MAKYQTISALVNQIPADTWDVLREIKERRPAMMLLELIDCGTRALQNQEPPPELRSPTMNPHETPPL*
Ga0126376_123532141	3300010359	Tropical Forest Soil	MIDYQTISELINQIPADTWEVLREIKERRPAIMLSELIDCRRRELQQPKRLESPSPTSSAI*
Ga0126372_103881623	3300010360	Tropical Forest Soil	MIDYQTISALINQIPADTWEVLREIKERRPAMMLSELIDCRRRELQQPKRLESPSPTSSAI*
Ga0126372_110733412	3300010360	Tropical Forest Soil	MVKYQTISALVNQIPADTWDVLREIKERRPAMMLLELIDCGRRALQNQEPPELRSQTMNPHYTPP*
Ga0126378_103000101	3300010361	Tropical Forest Soil	MANYPTISALVDQISADTWDVLQEIKERRPAMMLLELIDCRRRASQKQGPPEPRSHS
Ga0126378_104681621	3300010361	Tropical Forest Soil	MANYPTISALVEQISADTWDVLREIKERRPAMMLLELIDCRRRASQKQGPPEPRSHS
Ga0126378_105459663	3300010361	Tropical Forest Soil	MVNYQTISALVDQIPADTWDVLREIKERRPAMLLLELIDYKRRALQKQEPPEPRSQTTNP
Ga0126378_115236982	3300010361	Tropical Forest Soil	MVNYQTISALVDQIPADIWEVLQEIKERRPAMMLLELIDCRRRALQKQEPPKLRSQTMNPHDTPPL*
Ga0126378_120218221	3300010361	Tropical Forest Soil	MVSYQTISALVDQIPADIWEVLQEIKERRPAMMLSELINCRRRALEKQEPPELQSQT
Ga0126378_124601331	3300010361	Tropical Forest Soil	MTVNYQTIAALVNQIPADIWNVLREIKERRPGMMLSELIDCRRGALQQEPEPRSPQ
Ga0126377_110709921	3300010362	Tropical Forest Soil	MVNYQTISALVDQIPADIWEVLQEIKERRPAMMLLELINCRPQALKKQDPPELQSQTTNSYGTPPL*
Ga0126377_114168261	3300010362	Tropical Forest Soil	MVKYQTISALVDQIPSDTWDVLREIKERRPAMMLLELIDCGRRALQNQEPPELRSQTMNPHETPRY
Ga0126377_129260401	3300010362	Tropical Forest Soil	MVKYQTISVLVNQIPADTWDVLQEIKEHRPAMMLLELIDYRRRALQKQEPPEPVSTAVKFGP
Ga0126379_120040201	3300010366	Tropical Forest Soil	IPFEWMAFSVILFKREDCRMLNYKTIATLVNQIPADTWDVLWEIKERRPAMMLSELIDCRRRALQQAGPPEPRSPSVEPV*
Ga0126379_123098371	3300010366	Tropical Forest Soil	MMVNYEAITALVNQISSDTWEVLQQIRERRPAMMLSELIDCRSRALREQKVPNPSSSADALS*
Ga0126379_125084651	3300010366	Tropical Forest Soil	MVNYQTISALVDQIPADIWDVLREIKERRPAMMLLELIDCRRRALQKQEPPKLRSQTMNP
Ga0134125_111809502	3300010371	Terrestrial Soil	MIDYQTITALVNQIPTDTWDVLREIKERRPAMMLSELIDYRRGALQRQEPSESRSQANEPI*
Ga0105239_112104502	3300010375	Corn Rhizosphere	MIDYQTITELVNQIPTDTWDVLREIKERRPAMMLSELIDYRRGALQRQEPWESRS
Ga0126381_1001965251	3300010376	Tropical Forest Soil	MVNYQTISALVDQIPADTWEVLREIKERRPAMMLLELIDCRRRASQKQEPPEPR*
Ga0126381_1003568092	3300010376	Tropical Forest Soil	MANYPTISALVDQISADTWDVLQEIKERRPAMMLLELIDCRRRASQKQGPREPRSHPTNAHETPPL*
Ga0126381_1006440603	3300010376	Tropical Forest Soil	MVNYQPISALLNQIPADTWDVLREIKERCPGMMLLELIDCRKRALQNQQPPEPRSQTTNQHDTLSARREISV*
Ga0126381_1013598971	3300010376	Tropical Forest Soil	MVNYQTISALVNRIPADTWDVLQEIKEHRPAMMLLELIDCRRRALQKQERPEPRSQTTNPHDTPPL*
Ga0126381_1014048731	3300010376	Tropical Forest Soil	FRMVNYQTISALVNQIPADTWEVLREIKERRPAMMLLELIDCRRRALHEQAIMVPPSSPILPP*
Ga0126381_1020617112	3300010376	Tropical Forest Soil	MLNYQTISALINEIPADTWDVLQEIKERRPAMMLLELIDCRRRTLQKQEPPGSADRSR*
Ga0126381_1021648051	3300010376	Tropical Forest Soil	MVKYQTISALVNQIPADTWDVLREIKEHRPAMMLLELIDCRRRALQNQELPELRSQTMNPHDTPPL*
Ga0126381_1030237351	3300010376	Tropical Forest Soil	MIDYQTISALINQIPADTWEVLGEIKERRPAMMLSELIDCKRRELQQPKRLEPPSPTSSAYNSAI*
Ga0126381_1033761671	3300010376	Tropical Forest Soil	LVNYQTISALVDQIPADTWDVLREIKERRPAMMLLELIDCRRRLQKEE
Ga0126383_123348321	3300010398	Tropical Forest Soil	MVKYQTISALVNQIPADTWDVLREIKERRPAMMLLELIDCRPRALQNQEPPELRSQTMNPHAEAAHPV
Ga0126383_130685751	3300010398	Tropical Forest Soil	MVNYQTISALVDQIPAGIWEVLQEIKERRPAMMLLELINCRRRALEKQEPPELQSQTTNSYGTPPL*
Ga0126383_130812891	3300010398	Tropical Forest Soil	LIREDFGMVNYQTISALVDQIPADIWEVLQEIKERRPAMMLLELINCRQRALQKQEP
Ga0137363_116496151	3300012202	Vadose Zone Soil	MVDYQTIAELVNQISVDTWDVLREITRRRPAMMLSELIDCKTRALRQPERQEPRSPTNEPVNPGVRT*
Ga0137380_105537242	3300012206	Vadose Zone Soil	MVNYQAIAALVNQIPGDTWDVLREIKERRPAMMLSELIDFRRQALQRPEPPESQSQTTSRYDTPPL*
Ga0137358_106367111	3300012582	Vadose Zone Soil	MVNYQTITALVNQIPADTWDVLREIKERRPAMMLSELIDYRRRALQQQVLPEPQSQTTSLFDTP
Ga0137407_113563252	3300012930	Vadose Zone Soil	MVNYQTITALVNQIPAGTWDVLREIKERRPAMMLSELIECRRRALQEQVPPEPRSLTARLSDT
Ga0126375_107883151	3300012948	Tropical Forest Soil	MVKYQTISALVNQIPADTWDVLREIKERRPAMMLLELIDCGTRALQNQEPPPELRSPTMNPHETPPL*
Ga0126375_109620412	3300012948	Tropical Forest Soil	MVKYQTISALVNQIPADTWDVLREIKERRPAMMLLELIDCRRRALQKQELTKLRSQIMNP
Ga0126369_106614652	3300012971	Tropical Forest Soil	ILSKREDCIVVNYQTIAALVNQISADIWNVLREIKERRPGMMLSELIDCRRGALQQEPEPRSPTEEPI*
Ga0126369_128802591	3300012971	Tropical Forest Soil	VVNYQTIAALVNQISADIWNVLREIKERRPGMMLSEVIDCRRGALQQREPEPRSPIDEPI
Ga0164305_115556662	3300012989	Soil	QQATSVILSTREDFGMVNYQTITALVNQIPAGTWDVLREIKERRPAMMLSELIECRRRALQEQGPSEPRSQTARPSDTPSL*
Ga0132258_137139082	3300015371	Arabidopsis Rhizosphere	MVNYRTIIELVNQIPAGTWDVLREIKERRPAMMLSELIECRRRTSQDKEPPEPRSQTESLADTPSL*
Ga0132257_1015391901	3300015373	Arabidopsis Rhizosphere	MVNYQPITALVNQIPAATWDVLREIKERRPAMMLSEMIEYGRRALREQEPPEPRSQTAGLANTPSM*
Ga0182036_111248982	3300016270	Soil	MVNYQTISALVNQIPADTWEVLREIRERGPAMMLSELIDCRRRELQQPTRLEPASPTSSA
Ga0182036_117827722	3300016270	Soil	MVNYPTIAALVSQIPVDTWDVLQEIKERRPGMMLLELINCRRGALQQKEPAEPPSPTNDP
Ga0182035_121559911	3300016341	Soil	MDDYQTIAALVNHIPVDTWDVLLEIRERRPAMMLSELIDCGRRALQQAGPPEPRSPTVEPVIKAVESRM
Ga0182040_100086196	3300016387	Soil	MVIYQTISALVKQIPADTWEVLREIKERRPAMMLSELIDCRRRELQQPTRLEPPSPTSSV
Ga0182040_116736741	3300016387	Soil	MVNYQTISALVNQIPADTWEVLREIRERGTGMMLSELIDCRRRELQQPTRLEPASPTSSA
Ga0182037_111623411	3300016404	Soil	MVDYQTIAALVNQIPVDTWDVLLEIRERRPAMMLSELIDCGRRALQQAGPPEPRSPTVEPVIKAVESRM
Ga0210407_102488973	3300020579	Soil	MVNYQTIAALVNQIPVDTWDVLREIKQRRPAMMLSELIDCRRRMLQHQEAPE
Ga0210403_101333673	3300020580	Soil	MVNYQTIAALVNQIPVDTWDVLREIKQRRPAMMLSELIDCGRRTLQQREPPEPRSPTNQA
Ga0210403_102882461	3300020580	Soil	MVNYQTITALVNQIPAGTWDVLREIKERRPAMMLSELIECRRRALQARRLIPLSQVARYV
Ga0210403_104863401	3300020580	Soil	MVNYRTIMELVNQIPAGTWEVLREIKDRRPAMMLSELIECRRRALQEQERPEPRSQTARLSDT
Ga0210399_100852963	3300020581	Soil	MVNYQTITALVNQIPAGTWDVLREIKERRPAMMLSELIECRRRALQEQVPPEPRSQTARLSDTPSL
Ga0210399_101311272	3300020581	Soil	MVNYRTIMELVNQIPAGTWEVLREIKDRRPAMMLSELIECRRRALQEQERPEPRSQTARLSDTPSL
Ga0210399_102281162	3300020581	Soil	MVNYRTIMELVNQIPAGAWDVLREIKDRRPAMMISELIECRRRALQEQERPEPRSQTARLSDTPSL
Ga0210399_113564141	3300020581	Soil	SVILSTREDFGMVNYQTITALVNQIPAGTWDVLREIKERRPAMMLSELIGCRRRALQEQGPSEPRSQTARPSDTPSL
Ga0210401_100395795	3300020583	Soil	MVNYQTIAALVNQIPVDTWDVLRKIRERRPAMMLSELIDCRRRELQQQEPPEPRSPISEPINEPLRDTPA
Ga0210401_103805952	3300020583	Soil	MVNYQTIAALVNQIPVDTWDVLREIKQRRPAIMLSELIDCGRRTLQQREPPEPRSPTNQA
Ga0210401_107975592	3300020583	Soil	MVNYQTIAALINQIPVDTWDVLQKIKERRPAIMLSELIDCRRRELQQQEPQQPRSPTNEPIRDTPAS
Ga0210408_104381281	3300021178	Soil	MVNYQTITALVNQIPAGTWDVLREIKERRPAMMLSELIECRRRALREQVPPEPRSQTARLSDAPSL
Ga0210408_113394231	3300021178	Soil	NYRTIMELVNQIPAGTWDVLREIKDRRPAMMLSELIECRRRALQEQERPEPRSQTARLSDAPSL
Ga0210396_102138841	3300021180	Soil	MVNYQTIAALVNQIPVDTWDVLREIKQRRPAMMLSELIDCRRRTLQQREPPEPRSPTNQA
Ga0210396_112291551	3300021180	Soil	IFSKSEDLRMVNYRTIMELVNQIPAGAWDVLREIKDRRPAMMISELIECRRRALQEQERPEPRSQTARLSDTPSL
Ga0210396_113456871	3300021180	Soil	MVNYQTIMELVNQIPAGTWDVLREIKERRPAMMLSELIECRRRTSQEQGPSEPRSQTARPSDTPSL
Ga0210389_103597162	3300021404	Soil	MVNYRTIMELVNQIPAATWDVLREIKDRRPTMMLSELIECRRRALQEQERPEPRSQTARLCDTPSL
Ga0210386_109556822	3300021406	Soil	MVNYQTIAALVNQIPVDTWDVLREIKQRRPAMMLSELIDCRRRMLQHQEAPEPRSPTFEPATSR
Ga0210383_109597441	3300021407	Soil	MELVNQIPAATWDVLREIKDRRPAMMLSELIECRRRALQEQGPSEPRSQTA
Ga0210390_102031013	3300021474	Soil	MVNYQTITALVNQIPAGTWDVLREIKERRPAMMLSELIECRRRALQEQVPPQPRSQAAKY
Ga0210402_119865251	3300021478	Soil	MVNYQTITALVNQIPAGTWDVLREIKERRPAMMLSELIECRKRALQEQVPPEPRSQTARLSDTP
Ga0210409_111039031	3300021559	Soil	MVNYRTIMELVNQIPAATWDVLREIKDRRPTMMLSELIECRRRALQEQERPEPR
Ga0126371_103614812	3300021560	Tropical Forest Soil	MVNYQTISALVNRIPADTWDVLQEIKEHRPAMMLLELIDCRRRALQKQERPEPRSQTTNPHDTPPL
Ga0126371_104364543	3300021560	Tropical Forest Soil	MANYPTISALVEQISADTWDVLREIKERRPAMMLLELIDCRRRASQKQGPPEPRSHSTNPHETPPL
Ga0126371_104949071	3300021560	Tropical Forest Soil	MVNYQTIAALVNQIPADIWNVLREIKERRPGMMLSELIDCRRGSLQQREPEPRSPIDEPI
Ga0126371_105241622	3300021560	Tropical Forest Soil	MVNYQTISALVNRIPADTWDVLQEIKEHRPAMMLLELIDCRRRALQKLERPEPRSQTTNPCDTPPL
Ga0126371_108851232	3300021560	Tropical Forest Soil	MIDYQTIAALVNQIPTDTWDVLKRIKERRPAMMLSELIECRTRPPERSEPRSSTNEPV
Ga0126371_111064141	3300021560	Tropical Forest Soil	MIDYQTISALINQIPADTWEVLREIKERRPAMMLSELIDCRRREWQQPKRLESPSPTSSA
Ga0126371_126486921	3300021560	Tropical Forest Soil	VIDYQPIAALVSHISADTWNVLREIKERRPAMMLSELVDCSKQALKQLERSETR
Ga0126371_128824631	3300021560	Tropical Forest Soil	VVNYQTIAALVNQIPADIWNVLREIKERRPGMMLSELIDCRRGALQQEAEPRSPTEEPI
Ga0207684_112357161	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MVNYQTIMALVNQIPAGTWDVLREIKERRPAMMLSELIGCRRRALQEQGPSEPRSQTARPSDTPSL
Ga0207693_100275985	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MVNYQTIAALVNQIPVDTWDVLREIKQRRPAMMLSELIDCRRRTLQHQEAPEPRSPTFEPATSR
Ga0207664_102720872	3300025929	Agricultural Soil	MINYQTITALVNQIPAGTWDVLREIKERRPAMMLSELIGCRRRALQEQGPSEPRSQTARPSDTP
Ga0207664_105817421	3300025929	Agricultural Soil	MVNYQTITALVNQIPAGTWDVLREIKERRPAMMLSELIECRRRALREQEPPEPRSQTARLSDTPSL
Ga0207665_101039452	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MVNYQTITALVNQIPAGTWDVLREIKERRPAMMLSELIECRRRALQEQRPSEPRSQTARPSDTPSL
Ga0208368_1073771	3300027161	Forest Soil	MVNYQTITALVNQIPAGTWDVLREIKERRPAMMLSELIECRRRALQEQERPEPRSQTARLSDTPSL
Ga0209419_10177562	3300027537	Forest Soil	MVNYQTIAALVNQIPVDTWDVLREIKERRPAMMLSELIGCRRRALQEQGPSRSQTARPSDTPSL
Ga0209523_11066451	3300027548	Forest Soil	VILSKREDFRMVNYQTITALVNQIPAGTWDVLREIKERRPAMMLSELIECRRRALQEQVPPEPRSQTARLSDTPSL
Ga0209217_11479491	3300027651	Forest Soil	MVNYQTIMELVSQIPAGTWDVLREIKERRPAMMLSELIECRRRALREQVPPEPRSQTARLSDAPSL
Ga0209380_101314193	3300027889	Soil	MVNYQTITALVNQIPAGTWDVLREIKERRPAMMLSELIECKRRALQEQVPPEPRSQTARLSDTPSL
Ga0075401_116580331	3300030935	Soil	MVNYQTIMELVNQIPAGTWDVLREIKDRRPAMMLSELIECRRRALQEQGPSEPRSQTARPSDTPSL
Ga0170834_1044242341	3300031057	Forest Soil	MVNYQTITALVNQIPAGTWDVLREIKERRPAMMLSELIGCRRRALQEQGPSEPRSQTARPSDTLSL
Ga0170824_1021225492	3300031231	Forest Soil	QEASVIFSKREDMRMVNYRTIMELVNQIPAGTWDVLREIKDRRPAMMLSELIECRRRALQEQERPEPRSQTARLSDTPSL
Ga0318573_107046561	3300031564	Soil	MVNYQTISALVNQIPADTWEVLREIKERRPAMMLSELIDCRRRELQQPTRLEPPSPTSSV
Ga0310915_100097666	3300031573	Soil	MVIYQTISALVNQIPADTWEVLREIKERRPAMMLSELIDCRRRELQQPTRLEPPSPTSSV
Ga0310686_1164890031	3300031708	Soil	MVNYQTIAALVNQIPMDTWDVLREIKQRRPAMMLSELIDCRRRTLQQQEPPEPLLTKPT
Ga0307477_104502352	3300031753	Hardwood Forest Soil	MVNYQTITALVNQIPAGTWDVLREIKERRPATMLSELIECRRRALQEQVPPQPRSQTARLSDTPSL
Ga0307475_105997391	3300031754	Hardwood Forest Soil	MVNYQTIAALVNQIPVDTWDVLREIKQRRPAMMLSELIDCRRRELQQQEPPEPRSPISEPINEPLRDTPA
Ga0318521_108137121	3300031770	Soil	MVNYQTISALIDQIPADTWDVLREIKERRPAMMLLELIDCRRRALQKQEPPEPRSQAMNPHAEAAH
Ga0318548_105295511	3300031793	Soil	MVNYQTISALVDQIPADTWDVLREIKERRPGMMLLELIDCRRRALQKQEPPEPRSQAMN
Ga0307473_101359583	3300031820	Hardwood Forest Soil	MVNYQTIAALVNQIPVDTWDVLREIKQRRPAMMLSELIDCRRRMLQHQETPEPRSPTFEPATSR
Ga0306925_102374351	3300031890	Soil	MVDYQTIAALVNQIPVDTWDVLREIRERRPAMMLSELIDCGRRALQQAGPPEPRSPTVEPVIKAVESRM
Ga0306921_105480672	3300031912	Soil	MVNYQTISALVDQIPADTWDVLREIKERRPAMMLLELIDCRRRALQKQEPPEPR
Ga0310909_100275927	3300031947	Soil	MVIYQTISALVNQIPADTWEVLREIKERRPAMMLSELIDCRRRELQQPTRLEPASPTSSA
Ga0310909_100853185	3300031947	Soil	MVDYQTIAALVNQIPVDTWDVLREIRERRPAMMLSELIDCGRRALQQAGPPEPRSPTVE
Ga0310909_109863312	3300031947	Soil	MINYQPIAALVNQISVDTWDVLRQIKDRRPAMMLSELIDCRTRALERPERSEL
Ga0310909_112876122	3300031947	Soil	MVNYQTISALIDQIPADTWDVLREIKERRPAMMLLELIDCRRRALQKPERLN
Ga0318558_103874891	3300032044	Soil	MVIYQTISALVNQIPADTWEVLREIKERRPAMMLSELIDCRRRELQQPTRLE
Ga0318533_100380666	3300032059	Soil	MVNYQTISALIDQIPADTWDVLREIKERRPAMMLLELIDCRRRALQKPEPPEPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F043587

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences