NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F043656

Metagenome / Metatranscriptome Family F043656

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F043656
Family Type Metagenome / Metatranscriptome
Number of Sequences 156
Average Sequence Length 62 residues
Representative Sequence DSLMRTNSPVVRPDRELDGFEVRMDLDPSESHLRPTITVVDEAGRVVGFISHPEQIPAVKIVWG
Number of Associated Samples 135
Number of Associated Scaffolds 156

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.64 %
% of genes near scaffold ends (potentially truncated) 96.15 %
% of genes from short scaffolds (< 2000 bps) 95.51 %
Associated GOLD sequencing projects 128
AlphaFold2 3D model prediction Yes
3D model pTM-score0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(12.180 % of family members)
Environment Ontology (ENVO) Unclassified
(38.462 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(38.462 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 6.52%    β-sheet: 20.65%    Coil/Unstructured: 72.83%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.74
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.37.1.1: CBS-domain paird1pvma41pvm0.57
d.37.1.1: CBS-domain paird2nyca12nyc0.55
d.37.1.1: CBS-domain paird2yzqa22yzq0.54
d.37.1.1: CBS-domain paird1o50a31o500.53
d.37.1.1: CBS-domain paird2riha_2rih0.53

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 156 Family Scaffolds
PF09969DUF2203 89.74
PF00730HhH-GPD 1.92
PF00633HHH 1.28
PF10027DUF2269 1.28
PF13540RCC1_2 0.64
PF02470MlaD 0.64
PF02405MlaE 0.64

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 156 Family Scaffolds
COG01223-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 1.92
COG0177Endonuclease IIIReplication, recombination and repair [L] 1.92
COG1059Thermostable 8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 1.92
COG1194Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairsReplication, recombination and repair [L] 1.92
COG22313-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamilyReplication, recombination and repair [L] 1.92
COG0767Permease subunit MlaE of the ABC-type intermembrane phospholipid transporter MlaCell wall/membrane/envelope biogenesis [M] 0.64

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000363|ICChiseqgaiiFebDRAFT_11279663All Organisms → cellular organisms → Bacteria2621Open in IMG/M
3300002568|C688J35102_120746336All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1473Open in IMG/M
3300003322|rootL2_10318649All Organisms → cellular organisms → Bacteria1428Open in IMG/M
3300003997|Ga0055466_10214115All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium572Open in IMG/M
3300004006|Ga0055453_10278966All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium536Open in IMG/M
3300004052|Ga0055490_10298378All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes503Open in IMG/M
3300004081|Ga0063454_100906841All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes697Open in IMG/M
3300004156|Ga0062589_100276436All Organisms → cellular organisms → Bacteria1280Open in IMG/M
3300004156|Ga0062589_102558730All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium529Open in IMG/M
3300004463|Ga0063356_100860594All Organisms → cellular organisms → Bacteria1274Open in IMG/M
3300004463|Ga0063356_101022671All Organisms → cellular organisms → Bacteria1182Open in IMG/M
3300005329|Ga0070683_101337006All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium689Open in IMG/M
3300005332|Ga0066388_102764340All Organisms → cellular organisms → Bacteria896Open in IMG/M
3300005338|Ga0068868_101838944All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes573Open in IMG/M
3300005339|Ga0070660_101032480All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes695Open in IMG/M
3300005344|Ga0070661_101794933All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes520Open in IMG/M
3300005356|Ga0070674_101754328All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes562Open in IMG/M
3300005364|Ga0070673_100012478All Organisms → cellular organisms → Bacteria5835Open in IMG/M
3300005434|Ga0070709_11161048All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes619Open in IMG/M
3300005440|Ga0070705_101557131All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes555Open in IMG/M
3300005445|Ga0070708_101595038All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes607Open in IMG/M
3300005446|Ga0066686_10896715All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes583Open in IMG/M
3300005545|Ga0070695_100583613All Organisms → cellular organisms → Bacteria875Open in IMG/M
3300005547|Ga0070693_100508775All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300005547|Ga0070693_100541664All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300005549|Ga0070704_102232441All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium509Open in IMG/M
3300005564|Ga0070664_100732889All Organisms → cellular organisms → Bacteria922Open in IMG/M
3300005577|Ga0068857_102563683All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes500Open in IMG/M
3300005578|Ga0068854_101200264All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes680Open in IMG/M
3300005617|Ga0068859_101073762All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300005840|Ga0068870_11130898All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes564Open in IMG/M
3300005841|Ga0068863_102336211All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300005873|Ga0075287_1050074All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium573Open in IMG/M
3300006163|Ga0070715_10275276All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes890Open in IMG/M
3300006846|Ga0075430_100756267All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium801Open in IMG/M
3300006852|Ga0075433_11346261All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes618Open in IMG/M
3300006853|Ga0075420_101333594All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium616Open in IMG/M
3300006854|Ga0075425_100151515All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2657Open in IMG/M
3300006854|Ga0075425_101581432All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium739Open in IMG/M
3300006854|Ga0075425_102979801All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes518Open in IMG/M
3300006881|Ga0068865_101963653All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes530Open in IMG/M
3300006904|Ga0075424_100727055All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1060Open in IMG/M
3300006914|Ga0075436_100733314All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes733Open in IMG/M
3300006954|Ga0079219_10067644All Organisms → cellular organisms → Bacteria1619Open in IMG/M
3300007076|Ga0075435_101534581All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium584Open in IMG/M
3300009089|Ga0099828_10443480All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1170Open in IMG/M
3300009094|Ga0111539_10924999All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1014Open in IMG/M
3300009177|Ga0105248_10751422All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1100Open in IMG/M
3300009177|Ga0105248_13343922All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium510Open in IMG/M
3300009553|Ga0105249_13347274All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes516Open in IMG/M
3300009840|Ga0126313_11757857All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes518Open in IMG/M
3300010036|Ga0126305_10077407All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1951Open in IMG/M
3300010040|Ga0126308_10698860All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes697Open in IMG/M
3300010040|Ga0126308_11130344All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes552Open in IMG/M
3300010166|Ga0126306_11415659All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes575Open in IMG/M
3300010371|Ga0134125_11246581All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes812Open in IMG/M
3300010371|Ga0134125_12490703All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium562Open in IMG/M
3300010373|Ga0134128_12499401All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium569Open in IMG/M
3300010375|Ga0105239_11678639All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes735Open in IMG/M
3300010375|Ga0105239_11679362All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes735Open in IMG/M
3300010397|Ga0134124_12260660All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes584Open in IMG/M
3300010403|Ga0134123_13589366All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes503Open in IMG/M
3300011119|Ga0105246_11345700All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes664Open in IMG/M
3300012212|Ga0150985_109878153All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes585Open in IMG/M
3300012469|Ga0150984_102577897All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium651Open in IMG/M
3300012469|Ga0150984_112217341All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1157Open in IMG/M
3300012532|Ga0137373_10263750All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1385Open in IMG/M
3300012907|Ga0157283_10167332All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes664Open in IMG/M
3300012944|Ga0137410_12061134All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium508Open in IMG/M
3300012955|Ga0164298_11030257All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes610Open in IMG/M
3300012986|Ga0164304_10362058All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1017Open in IMG/M
3300014254|Ga0075312_1040807All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium863Open in IMG/M
3300014272|Ga0075327_1123541All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes794Open in IMG/M
3300014301|Ga0075323_1043535All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium860Open in IMG/M
3300014320|Ga0075342_1182580All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes585Open in IMG/M
3300014326|Ga0157380_11537548All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes719Open in IMG/M
3300015077|Ga0173483_10086841All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1276Open in IMG/M
3300015209|Ga0167629_1124280All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes751Open in IMG/M
3300015374|Ga0132255_102914776All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium731Open in IMG/M
3300018056|Ga0184623_10052486All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1864Open in IMG/M
3300018422|Ga0190265_11042527All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium939Open in IMG/M
3300018429|Ga0190272_10292014All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1256Open in IMG/M
3300019865|Ga0193748_1020671All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes620Open in IMG/M
3300020146|Ga0196977_1048125All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1017Open in IMG/M
3300025310|Ga0209172_10171979All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1166Open in IMG/M
3300025327|Ga0209751_10460811All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1045Open in IMG/M
3300025906|Ga0207699_10768143All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes708Open in IMG/M
3300025910|Ga0207684_11733255All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes502Open in IMG/M
3300025923|Ga0207681_10719399All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes831Open in IMG/M
3300025927|Ga0207687_11685969All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes543Open in IMG/M
3300025938|Ga0207704_11736418All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes536Open in IMG/M
3300025960|Ga0207651_10026289All Organisms → cellular organisms → Bacteria3633Open in IMG/M
3300025961|Ga0207712_12126270All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes502Open in IMG/M
3300026000|Ga0208143_102808All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes668Open in IMG/M
3300026004|Ga0208416_1007069All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes859Open in IMG/M
3300026095|Ga0207676_11852992All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium602Open in IMG/M
3300026464|Ga0256814_1036845All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes594Open in IMG/M
3300027682|Ga0209971_1154937All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes565Open in IMG/M
3300027683|Ga0209392_1210299All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300027775|Ga0209177_10295152All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes615Open in IMG/M
3300027821|Ga0209811_10433724All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes510Open in IMG/M
3300027873|Ga0209814_10258178All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium756Open in IMG/M
3300027876|Ga0209974_10053787All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1356Open in IMG/M
3300027964|Ga0256864_1228776All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes532Open in IMG/M
3300027979|Ga0209705_10162690All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1189Open in IMG/M
3300028592|Ga0247822_10040695All Organisms → cellular organisms → Bacteria3219Open in IMG/M
3300028592|Ga0247822_11943636All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium504Open in IMG/M
3300028718|Ga0307307_10201345All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes630Open in IMG/M
3300028764|Ga0302260_1115822All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium556Open in IMG/M
3300028793|Ga0307299_10411327All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes507Open in IMG/M
3300028807|Ga0307305_10481202All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes557Open in IMG/M
3300028809|Ga0247824_11050506All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes518Open in IMG/M
3300028880|Ga0307300_10118914All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes811Open in IMG/M
3300030619|Ga0268386_10379382All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1000Open in IMG/M
3300030620|Ga0302046_10347108All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1220Open in IMG/M
3300030904|Ga0308198_1034343All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes737Open in IMG/M
3300030993|Ga0308190_1062133All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes747Open in IMG/M
3300031093|Ga0308197_10189141All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium692Open in IMG/M
3300031094|Ga0308199_1052720All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes800Open in IMG/M
(restricted) 3300031197|Ga0255310_10095100All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium798Open in IMG/M
3300031547|Ga0310887_10420040All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium791Open in IMG/M
3300031547|Ga0310887_10554328All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium699Open in IMG/M
3300031547|Ga0310887_10736243All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes615Open in IMG/M
3300031548|Ga0307408_101205340All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes706Open in IMG/M
3300031548|Ga0307408_102394354All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes512Open in IMG/M
3300031720|Ga0307469_11738356All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium602Open in IMG/M
3300031731|Ga0307405_10209846All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1421Open in IMG/M
3300031824|Ga0307413_11237187All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes651Open in IMG/M
3300031852|Ga0307410_10230613All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1429Open in IMG/M
3300031852|Ga0307410_10726168All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes839Open in IMG/M
3300031854|Ga0310904_11285259All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium530Open in IMG/M
3300031901|Ga0307406_10021264All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae3836Open in IMG/M
3300031901|Ga0307406_11262348All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes643Open in IMG/M
3300031903|Ga0307407_11143991All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes606Open in IMG/M
3300031911|Ga0307412_11773119All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes567Open in IMG/M
3300031995|Ga0307409_100215712All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1728Open in IMG/M
3300031996|Ga0308176_10409455All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1355Open in IMG/M
3300032002|Ga0307416_100137093All Organisms → cellular organisms → Bacteria2216Open in IMG/M
3300032004|Ga0307414_11075517All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes742Open in IMG/M
3300032004|Ga0307414_11482165All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes631Open in IMG/M
3300032075|Ga0310890_11677826All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes527Open in IMG/M
3300032126|Ga0307415_100394653All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1179Open in IMG/M
3300032126|Ga0307415_100437894All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1126Open in IMG/M
3300032126|Ga0307415_102350657All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes523Open in IMG/M
3300032164|Ga0315283_10371378All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1555Open in IMG/M
3300032164|Ga0315283_10488932All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1337Open in IMG/M
3300032180|Ga0307471_100502555All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1360Open in IMG/M
3300033407|Ga0214472_10469024All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1173Open in IMG/M
3300033475|Ga0310811_10989270All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes739Open in IMG/M
3300033488|Ga0316621_10298663All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1058Open in IMG/M
3300033557|Ga0316617_101916880All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes607Open in IMG/M
3300033815|Ga0364946_021021All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1244Open in IMG/M
3300034099|Ga0373902_075841All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes736Open in IMG/M
3300034123|Ga0370479_0138767All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium663Open in IMG/M
3300034818|Ga0373950_0027218All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1042Open in IMG/M
3300034818|Ga0373950_0038878All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes905Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.18%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere10.90%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere7.05%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.41%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.77%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.21%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil3.21%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands2.56%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere2.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.56%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.92%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.92%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.92%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.92%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.28%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.28%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.28%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.28%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.28%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.28%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.28%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.28%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.28%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.28%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.28%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil1.28%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.28%
SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment0.64%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment0.64%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.64%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.64%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.64%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.64%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.64%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.64%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.64%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.64%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.64%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.64%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.64%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.64%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.64%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.64%
Sugarcane Root And Bulk SoilHost-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil0.64%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.64%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.64%
Sediment SlurryEngineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry0.64%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003322Sugarcane root Sample L2Host-AssociatedOpen in IMG/M
3300003997Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1EnvironmentalOpen in IMG/M
3300004006Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2EnvironmentalOpen in IMG/M
3300004052Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005873Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300014254Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2EnvironmentalOpen in IMG/M
3300014272Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1EnvironmentalOpen in IMG/M
3300014301Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1EnvironmentalOpen in IMG/M
3300014320Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015209Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3B, Proglacial river margin, by glacier terminus)EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300019865Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s1EnvironmentalOpen in IMG/M
3300020146Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13CEnvironmentalOpen in IMG/M
3300025310Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025327Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026000Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_404 (SPAdes)EnvironmentalOpen in IMG/M
3300026004Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302 (SPAdes)EnvironmentalOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026464Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 CS5EnvironmentalOpen in IMG/M
3300027682Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027683Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027964Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111 HiSeqEnvironmentalOpen in IMG/M
3300027979Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028764Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E1_4EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300030619Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300030904Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030993Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031094Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032164Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M
3300033488Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_CEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300033815Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17EnvironmentalOpen in IMG/M
3300034099Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.3EngineeredOpen in IMG/M
3300034123Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_15EnvironmentalOpen in IMG/M
3300034818Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiFebDRAFT_1127966313300000363SoilLMRTNSPVVGPDEELTGYEVRMDLVPGESHLRPTITVLDQGCVVGFISHPELVEGVKIVWRAEPQG*
C688J35102_12074633613300002568SoilTRADSLMRTNSPVVRPDRELGGFQVRMDLDPSESHLRPTITVVDESGRVVGFISHPEQIPEIKIVWG*
rootL2_1031864913300003322Sugarcane Root And Bulk SoilARPDRELAGFEVRMDLDPTESHLRPTITVVDEGGRVVGFISHPEQIPEVKIVWG*
Ga0055466_1021411523300003997Natural And Restored WetlandsDSLMRTRSPVVQPDQELDGYQVRMDLDPSDSHLRPTITVVDTDGRVVGFISHPEQIAGVRIFWGE*
Ga0055453_1027896613300004006Natural And Restored WetlandsEVRADQLMRSNTCVVRPDQELDGFTLRMDIDEAESHLRPTITVVDAGGCVVGFISHPEQIPEITIVWG*
Ga0055490_1029837823300004052Natural And Restored WetlandsWHTRADSLMRTNSPVVGPDQELEGFQIRMDLDPTESHLRPTITVVDGDGRVIGFISHPEQVEGVHIVWG*
Ga0063454_10090684113300004081SoilAEGKHPWHTRADSLMRTNSPVVRPDRELEGFEVRMDLDPTESHLRPTITVVDEAGRVVGFISHPEQIPVIKIVWG*
Ga0062589_10027643643300004156SoilPDEELTGYEVRMDLVPGESHLRPTITVLDQGCVVGFISHPELVEGVKIVWRDEQREL*
Ga0062589_10255873013300004156SoilPWHTRADSLMRTNSPVVRPDQELTGYQVRMDLDSSESHLRPTITVVDTEGLVIGFISHPEQVPGVEIVWG*
Ga0063356_10086059443300004463Arabidopsis Thaliana RhizosphereMRTNSPVATAGQELDGFQVRMDLDPNESHLRPTITVVDDDRRVIGFISHPEQVPGVEIVWG*
Ga0063356_10102267133300004463Arabidopsis Thaliana RhizosphereDHELQGFELRMDLDPHESHLRPTITVVDEQGRVVGFISHPEQIPEVKIVWG*
Ga0070683_10133700623300005329Corn RhizosphereMRTKSPVAQPDQELEGFQVRMDLDASDSHLRPTITVVDTDGRVVGFISHPEQIEGVQIIWGE*
Ga0066388_10276434033300005332Tropical Forest SoilLTGYEVRMDLVPGESHLRPTITVLDQGCVVGFISHPELVEGVKIIWNEGTA*
Ga0068868_10183894413300005338Miscanthus RhizosphereLAEGKHPWHTRADSLMRTNSPVVRPDRELDGFEVRMDLDPSESHLRPTITVVDEAGRVVGFISHPEQIPAVKIVWG*
Ga0070660_10103248023300005339Corn RhizosphereELDGFEVRMDLDPSESHLRPTITAVDEAGRVVGFISHPEQIPAVKIVWG*
Ga0070661_10179493313300005344Corn RhizosphereLDGFEVRMDLEPTESHLRPTITVVDADHRVVGFISHPEQVPGVTVIWG*
Ga0070674_10175432823300005356Miscanthus RhizospherePPDQELDGFEVRMDLEPTESHLRPTITVVDADHRVVGFISHPEQVPGVTVIWG*
Ga0070673_10001247893300005364Switchgrass RhizosphereDQELDGFEVRMDLEPDESHLRPTITVVDADHRVVGFISHPEQVPGVKLVWG*
Ga0070709_1116104813300005434Corn, Switchgrass And Miscanthus RhizosphereEGYEVRMDLDPHESHLRPTITVLDDNRCVVGFISHPEQVAGVKIVWNKGTK*
Ga0070705_10155713123300005440Corn, Switchgrass And Miscanthus RhizosphereRADSLIRTRSPVAQPDQELDGYQVRMDLDPSDSHLRPTITVVDTDGRVVGFISHPEQIAGVQIIWGE*
Ga0070708_10159503823300005445Corn, Switchgrass And Miscanthus RhizospherePWHTRADQIMRTNSPIARADEELEGYEVRMDLDPHESHLRPTITVLDDNRCVVGFISHPEQVAGVKIVWNEGTK*
Ga0066686_1089671523300005446SoilNSPVVGPEQELTGYKVRMDLAPDESHLRPTITVVDGEGLVVGFISHPEQVPGVEIVWG*
Ga0070695_10058361333300005545Corn, Switchgrass And Miscanthus RhizosphereVVRPDRELAGFEVRMDLDPSESHLRPTITVVDESGKVVGFISHPEQIPDVKIVWG*
Ga0070693_10050877513300005547Corn, Switchgrass And Miscanthus RhizosphereRPDQELTGYQVRMDLDPNESHLRPTITVVDGEGQVIGFISHPKQIVGVEIIWG*
Ga0070693_10054166413300005547Corn, Switchgrass And Miscanthus RhizosphereELDGFEVRMDLDPAESHLRPTITVVDEGGRVVGFISHPEQIPAVKIVWG*
Ga0070704_10223244113300005549Corn, Switchgrass And Miscanthus RhizosphereRTRSPVAQPDQELDGYQVRMDLDPSDSHLRPTITVVDTDGRVVGFISHPEQIAGVHIIWGE*
Ga0070664_10073288933300005564Corn RhizosphereVAQPDQELEGFQVRMDLDASDSHLRPTITVVDTDGRVVGFISHPEQIEGVQIIWGE*
Ga0068857_10256368313300005577Corn RhizosphereEGKHPWHTRADSLMRTNSPVVRPDRELDGFEVRMDLDPTESHLRPTITVVDEAGRVVGFISHPEQIPAVKIVWG*
Ga0068854_10120026433300005578Corn RhizospherePDRELDGFEIRMDLDPTESHLRPTITVVDEAGRVVGFISHPEQIPAVKIVWG*
Ga0068859_10107376213300005617Switchgrass RhizosphereSLMRTNSPVVRPDQELTGYQVRMDLDSSESHLRPTITVVDTEGLVIGFISHPEQVPGVEIVWG*
Ga0068870_1113089813300005840Miscanthus RhizosphereHTRADSLMRANTCVVPPDQELDGFEVRMDLEPTESHLRPTITVVDADHRVVGFISHPEQVPGVTVIWG*
Ga0068863_10233621123300005841Switchgrass RhizosphereGKHPWHTRADSLMRADTCVVAPDQELDGFEVRMDLEPDESHLRPTITVVDADHRVVGFISHPEQVPGVKLVWG*
Ga0075287_105007413300005873Rice Paddy SoilWHTRADSLMRTRSPVAQPDQELDGFQVRMDLDPSDSHLRPTITVVDAEGRVVGFISHPEQIAGVEIIFGE*
Ga0070715_1027527613300006163Corn, Switchgrass And Miscanthus RhizosphereARADEELEGYEVRMDLDPHESHLRPTITVLDDNRCVVGFISHPEQVAGVKIVWNEGTK*
Ga0075430_10075626733300006846Populus RhizosphereAEGKHPWHTRVDSLMRTNSPVVRPDQELEGFTIRMDLDPNESHLRPTITVVDEDRRVVGFISHPEQVAGIEIVWG*
Ga0075433_1134626123300006852Populus RhizosphereLEGFEVRLDLDPHESHLRPTITVLDDNRCVVGFISHPEQVAGVKIIWSEGGGKQ*
Ga0075420_10133359413300006853Populus RhizospherePVVRPDQELEGFTIRMDLDPNESHLRPTITVVDEDRRVVGFISHPEQVAGIEIVWG*
Ga0075425_10015151513300006854Populus RhizosphereDEELEGYEVRMDLDPHESHLRPTITVLDDNRCVVGFISHPEQVAGVKIVWNEGTK*
Ga0075425_10158143213300006854Populus RhizospherePDQELTGYQVRMDLDSSESHLRPTITVVDTEGLVIGFISHPEQVPGVEIVWG*
Ga0075425_10297980113300006854Populus RhizosphereTRADSLMRTNSPVVRPDRELAGFEVRMDLDPSESHLRPTITVVDESGKVVGFISHPEQIPEVKIVWG*
Ga0068865_10196365323300006881Miscanthus RhizosphereDSLMRTNSPVVRPDRELDGFEVRMDLDPSESHLRPTITVVDEAGRVVGFISHPEQIPAVKIVWG*
Ga0075424_10072705533300006904Populus RhizospherePVVAPERELTGFRIRMDLDPNESHLRPTITVVDTDRRVIGFISHPELIPGVEIVWGGEG*
Ga0075436_10073331423300006914Populus RhizosphereEELTGYEVRMDLVPGESHLRPTITVLDQGCVVGFISHPELVEGVKIVWRDEQREQ*
Ga0079219_1006764413300006954Agricultural SoilNSPVVRPDRELAGFEVRMDLDPSESHLRPTITVVDESGKVVGFISHPEQIPEVKIVWG*
Ga0075435_10153458123300007076Populus RhizosphereDALMRTNSPVVSPDQELTGYKVRMDLDPNESHLRPTITVVDGDGLVIGFISHPEQIAGVEIIWG*
Ga0099828_1044348013300009089Vadose Zone SoilPDQELEGFELRMDLDPTELHLRPTISVLDQQGCVIGFISHPEQLTGVKIIWK*
Ga0111539_1092499933300009094Populus RhizosphereRPDQELDGFPIRMDLDPNESHLRPTITVVDEDRRVVGFISHPEQVAGIEIVWG*
Ga0105248_1075142233300009177Switchgrass RhizosphereVGPEQELEGMELRMDLEPNESHLRPTITVIDDERRVIGFISHPEQVPGIRMVWG*
Ga0105248_1334392213300009177Switchgrass RhizosphereNSPVVRPDQELTGYQVRMDLDSSESHLRPTITVVDTEGLVIGFISHPEQVPGVEIVWG*
Ga0105249_1334727423300009553Switchgrass RhizosphereTSSCVVRGDQDLDGFELRMDTEPNESHLRPTITVVDADNCVIGFISHPEQIAGISIVWG*
Ga0126313_1175785713300009840Serpentine SoilELAGFQVRMDLDPNESHLRPTITVVDKDGCVVGFISHPEQIEGVQIVWG*
Ga0126305_1007740743300010036Serpentine SoilHTPADSLMRPNSPVVHPDRDLSGYEVRMDNDPNESHLRPTITVVDAQGRVVGFISHPEQIPDVKIVWG*
Ga0126308_1069886023300010040Serpentine SoilMRTNSPVVRPDRELQGFEIRMDLEATESHLRPTITVVDEQGRVVGFISHPEQIPEVKIVWG*
Ga0126308_1113034413300010040Serpentine SoilEGKHPWHTRADTLMRPNSPVVHPDLELSGYEVRMNNDPNESHLRPTITVVDGQGRVVGFISHPEELVDVKIVWG*
Ga0126306_1141565923300010166Serpentine SoilELQGFQVRMDLDPAESHLRPTITVVDEGGRVVGFISHPEQIPEIKIVWG*
Ga0134125_1124658133300010371Terrestrial SoilLEGYEVRMDLDPHESHLRPTITVLDDNRCVVGFISHPEQVAGVKIVWNEGTK*
Ga0134125_1249070323300010371Terrestrial SoilEGKHPWHTRADSLMRTNSPVVRPDRELKGFEVRMDHDPNESHLRATITVVDDQGRVVGFISHPEQIPEVKIVLG*
Ga0134128_1249940123300010373Terrestrial SoilMRTKSAVVRADQELTGFKVRMDLDPADSHLRPTITVVDGGGLVIGFISHPEQVPGVEIVWG*
Ga0105239_1167863923300010375Corn RhizosphereAEGKHPWHTRADSLMRTNSPVVRPDRELDGFEVRMDLDPSESHLRPTITVVDEAGRVVGFISHPEQIPAVKIVWG*
Ga0105239_1167936233300010375Corn RhizosphereAQPDQELEGFQVRMDLDASDSHLRPTITVVDTDGRVVGFISHPEQIEGVQIIWGE*
Ga0134124_1226066023300010397Terrestrial SoilDQIMRTNSPIVRADEELEGYEVRMDLDPHESHLRPTITVLDENRCVVGFISHPEQVAGVKIVWNEGTT*
Ga0134123_1358936623300010403Terrestrial SoilPVVRPDRELDGFEVRMDLDPSESHLRPTITVVDEAGRVVGFISHPEQIPAVKIVWG*
Ga0105246_1134570023300011119Miscanthus RhizosphereLMRTNSPVVRPDQELNGYQVRMDLDSNESHLRPTITVVDEGGLVVGFISHPEQIAGVEIVWG*
Ga0150985_10987815323300012212Avena Fatua RhizosphereADSLMRTNSPVARADQELEGFKVRLDLEPHESHLRPTITVVDDDRRVIGFISHPEQVPGVEIIYG*
Ga0150984_10257789723300012469Avena Fatua RhizosphereALPEQELTGYQVRMDLDPSDSHLRPTITVVDGDGRVIGFISHPEQVPGVEIVWG*
Ga0150984_11221734133300012469Avena Fatua RhizosphereEGKHPWHTRADSLMRTNSPVVRPDRELSGFEIRMDLEPSESHLRPTITVVDEGGRVVGFISHPEQIPEVKIVWG*
Ga0137373_1026375013300012532Vadose Zone SoilNSPVVGLDEELTGYEVRMDLDSSESHLRPTITVLDQGCVVGFISHPEQVAGVKIIWSENLREQ*
Ga0157283_1016733223300012907SoilPVAQPDQELDGYQVRMDLDPSDSHLRPTITVVDTDGRVVGFISHPEQIAGVRIIWAE*
Ga0137410_1206113423300012944Vadose Zone SoilHTRADALMRTGSPVVGPEQELAGFRIRMDLDPSDSHLRPTITVVDADRRVVGFISHPEQVPGVEIVSG*
Ga0164298_1103025723300012955SoilMRTNSPVVRPEQELTGFKVRMDLDSNESHLRPTITVVDGEGLVIGFISHPEQIPGIEIVWG*
Ga0164304_1036205833300012986SoilHPWHTRADALMRTNSAVIAPDQELEGYELRMDLDPTELHLRPTITVLDDQRRVVGFISHPEQLTGVKIIWK*
Ga0075312_104080713300014254Natural And Restored WetlandsELEGFTIRLDLEPNESHLRPTITVVDEDRRVVGFISHPEQVAGIEIVWG*
Ga0075327_112354133300014272Natural And Restored WetlandsKHPWHTRVDTLMRPNSPVVRPDRELKGFEVRMDNDPNESHLRPTITVVDEQGRVVGFISHPEQIPDIRIVWG*
Ga0075323_104353513300014301Natural And Restored WetlandsPWHTRADSLMRLNSPVVRPDQELEGFTIRMDLDPNESHLRPTVTVVDEDRRVVGFISHPEQVAGIEIVWG*
Ga0075342_118258013300014320Natural And Restored WetlandsMRTRSPVAQPDQELEGYQVRMDLDSADSHLRPTITVVDGGGRVVGFISHPEQVAGVEIVYG*
Ga0157380_1153754823300014326Switchgrass RhizosphereMRTNSPVVRPDRELDGFEVRMVLDPSESHLRPTITVVDEAGRVVGFISHPEQIPAVKIVWG*
Ga0173483_1008684113300015077SoilMRTRSPVAQPDQELDGYQVRMDLDPSDSHLRPTITVADTDGRVVGFISHPEQIAGVRIIWAE*
Ga0167629_112428033300015209Glacier Forefield SoilVRPDVELSGFQVLMDNDPNESHLRPTITVVDQQGRVVGFISHPEQIPEVKIVWG*
Ga0132255_10291477623300015374Arabidopsis RhizosphereEGKHPWHTRADSLMRTKSPVALPEQELTGYQVRMDLDPSDSHLRPTITVVDGDGRVIGFISHPEQVPGVEIVWG*
Ga0184623_1005248613300018056Groundwater SedimentHPWHTRVDSLMRPNSPVVRPDRELNGLEVLMDNDPNESHLRPTITVVDEQGRVVGFISHPEQIPEVKIVWG
Ga0190265_1104252713300018422SoilKHPWHTRVDTLMRTNSPVVEPSQELEGYRVRMDLDPNESHLRPTITVVDSDRRVVGFISHPEQVAGIEIVWGDHA
Ga0190272_1029201433300018429SoilNSPVVQPDQELEGYRIRMDLDPTESHLRPTITVVDGDRRVVGFISHPEQVAGVEIVWG
Ga0193748_102067123300019865SoilTRADSLMRTNSPVVRPDRDLDGFEVRMDLDPSESHLRPTITVVDEQGKVVGFISHPEQIPGVKIV
Ga0196977_104812513300020146SoilSPVATAHQELEGYQVRMDLDPNESHLRPTITVLDDDRRVIGFISHPEQVPGVEIVWG
Ga0209172_1017197933300025310Hot Spring SedimentGRDPLHTRADELMRPNTCVVAPEQELDAFVLRMDLEENESHLRATITVVDDDHRVVGFISHPEQIAGLQIVWG
Ga0209751_1046081133300025327SoilSPVVGPDQELTGYKVRMDLDPNEAHLRPTITVVDQQGLVVGFISHPEQIPGVEIVWG
Ga0207699_1076814323300025906Corn, Switchgrass And Miscanthus RhizosphereMEGYEVRMDLDPHESHLRPTITVLDDNRCVVGFISHPEQVAGVKIVWNKGTK
Ga0207684_1173325523300025910Corn, Switchgrass And Miscanthus RhizosphereDSLMRTNSPVVRPDQELTGYQVRMDLDSNESHLRPTITVVDGGGLVVGFISHPEQIAGVEIVWG
Ga0207681_1071939933300025923Switchgrass RhizosphereELAGYEVRMDLVPGESHLRPTITVLDQGCVVGFISHPELVEGVKIVWRDEQREQ
Ga0207687_1168596913300025927Miscanthus RhizosphereHPWHTRADSLMRTNSPVVRPDRELDGFEVRMDLDPSESHLRPTITVVDEAGRVVGFISHPEQIPAVKIVWG
Ga0207704_1173641813300025938Miscanthus RhizosphereDSLMRTNSPVVRPDRELDGFEVRMDLDPSESHLRPTITVVDEAGRVVGFISHPEQIPAVKIVWG
Ga0207651_1002628973300025960Switchgrass RhizosphereTCVVAPDQELDGFEVRMDLEPDESHLRPTITVVDADHRVVGFISHPEQVPGVKLVWG
Ga0207712_1212627023300025961Switchgrass RhizosphereTSSCVVRGDQDLDGFELRMDTEPNESHLRPTITVVDADNCVIGFISHPEQIAGISIVWG
Ga0208143_10280823300026000Rice Paddy SoilEGKHPWHTRADELMRTRSPVVTPDRELTGFQIRMDLDPSDSHLRPTITVVDAQGCVVGFISHPEQIEGVEIIWG
Ga0208416_100706913300026004Rice Paddy SoilDELMRTRSPVVTPDRELTGFQIRMDLDPSDSHLRPTITVVDAQGCVVGFISHPEQIEGVEIIWG
Ga0207676_1185299223300026095Switchgrass RhizosphereTTVVGPEQELEGMELRMDLEPNESHLRPTITVIDDERRVIGFISHPEQVPGIRMVWG
Ga0256814_103684523300026464SedimentMRTDACAVTADQDLDGFELHMDHDPTESHLRPTITVVDGDNRVIGFISHPELVPGLKIIWTPVG
Ga0209971_115493713300027682Arabidopsis Thaliana RhizospherePVAQPDQELDGYQVRMDLDPSDSHLRPTITVVDTDGRVVGFISHPEQIAGVRIIWAE
Ga0209392_121029913300027683Freshwater SedimentMRANTCIVAPDQELDGFEVRMDLEPSESHLRPTITVVDAEHRVVGFISHPEDVPGVKVVW
Ga0209177_1029515223300027775Agricultural SoilNSPVVRPDRELAGFEVRMDLDPSESHLRPTITVVDESGKVVGFISHPEQIPEVKIVWG
Ga0209811_1043372423300027821Surface SoilTNSPVVRPDRDLDGFEVRMDLDPNESHLRPTITVVDEQGKVVGFISHPEQIPGVKIV
Ga0209814_1025817813300027873Populus RhizosphereGKHPWHTRVDSLMRTNSPVVRPDQELDGFPIRMDLDPNESHLRPTITVVDEDRRVVGFISHPEQVAGIEIVWG
Ga0209974_1005378733300027876Arabidopsis Thaliana RhizosphereDSLMRTNSPVVRPDRELDGFEIRMDLDPTESHLRPTITVVDEAGRVVGFISHPEQIPAVKIVWG
Ga0256864_122877623300027964SoilDALMRTNSPVVQPDQELQGYRVRMDLDANESHLRPTITVVDADRRVVGFISHPEQVKGVEIVWGDHA
Ga0209705_1016269033300027979Freshwater SedimentVVRPDVELNGFEVLMDNDPNESHLRPTLTVVDDQGRVVGFISHPEEIPEVKIVWG
Ga0247822_1004069573300028592SoilSLIRTRSPVAQPDQELDGYQVRMDLDPSDSHLRPTITVVDTDGRVVGFISHPEQIAGVQIIWGE
Ga0247822_1194363613300028592SoilDSLMRTNTTVVGPEQELEGMELRMDLEPNESHLRPTITVIDGERRVIGFISHPEQVPGIRMVWG
Ga0307307_1020134523300028718SoilPVVRPDRDLDGFEVRMDLDPSESHLRPTITVVDEQGKVVGFISHPEQIPGVKIV
Ga0302260_111582223300028764FenHPWHTRADALMRTNTTVVGPEHELEGMELRMDLEPNESHLRPTITVVDAERRVVGFISHPEQVPGIRVVHG
Ga0307299_1041132723300028793SoilRVDSLMRKDSAVVRPGQELKGYELKMNDDPNESHLRATITVVDDDGRVVGFISHPEQIPDVKIVRE
Ga0307305_1048120223300028807SoilHPWHTRADSLMRTNSPVVRPDRELEGFEVRMDLDPAESHLRPTITVVDEGGRVVGFISHPEQIPAVKIVWG
Ga0247824_1105050623300028809SoilLMRANTCVVPPDQELDGFEVRMDLEPTESHLRPTITVVDADHRVVGFISHPEQVPGVTVIWG
Ga0307300_1011891433300028880SoilGKHPWHTRADSLMRTNSPVVRPDRDLDGFEVRMDLDPSESHLRPTITVVDEQGKVVGFISHPEQIPGVKIV
Ga0268386_1037938233300030619SoilRADTLMRTNSPVVQPDQELQGYRVRMDLDANESHLRPTITVVDGDRRVVGFISHPEQVEGVEIVWGNHA
Ga0302046_1034710833300030620SoilVRPDKELAGFELRMDLDPNESHLRATITVVDEQGRVVGFISHPEQIPDVKIVWGGA
Ga0308198_103434313300030904SoilRADSLMRTNSPVVRPDRDLDGFEVRMDLDPSESHLRPTITVVDEQGKVVGFISHPEQIPGVKIV
Ga0308190_106213333300030993SoilWHTRADSLMRTNSPVVRPDRDLDGFEVRMDLDPSESHLRPTITVVDEQGKVVGFISHPEQIPGVKIV
Ga0308197_1018914123300031093SoilLMRTGSPVVGPDQELAGFRIRMDLDPSDSHLRPTITVVDADRRVVGFISHPEQVPGVEIVSG
Ga0308199_105272033300031094SoilPNSPVVRPDRELNGLEVRMDNDPDESHLRPTITVVDEQGRVVGFISHPEQIPGVKIV
(restricted) Ga0255310_1009510033300031197Sandy SoilEQELEGYELRMDLDPTELHLRPTITVLDDQRRVVGFISHPEQLAGVKIIWK
Ga0310887_1042004033300031547SoilMRTNTTVVGPEQELEGMELRMDLEPNESHLRPTITVIDDDRRVIGFISHPEQVPGIRMVW
Ga0310887_1055432833300031547SoilELEGFTIRMDLDPNESHLRPTITVVDEDHRVVGFISHPEQVAGIEIVLG
Ga0310887_1073624313300031547SoilTCVVPPDQELYGFEVRMDLEPTESHLRPTITVVDADHRVVGFISHPEQVPGVTVIWG
Ga0307408_10120534013300031548RhizosphereRTNSPVVRPDRELEGFEVRMDLDPNESHLRPTITVVDDAGKVVGFISHPEQIPEIKIVWG
Ga0307408_10239435413300031548RhizosphereELSGYEVRMDNDPNESHLRPTITVVDAQGRVVGFISHPEEIPDVKILWG
Ga0307469_1173835613300031720Hardwood Forest SoilKHPWHTRADALMRTNSAVIGPDQELEGFELRMDLDPTELHLRPTITVLDQRGCVIGFISHPEQLTGVKIIWK
Ga0307405_1020984613300031731RhizosphereKHPWHTRADELMRTNSPVVRPEQELAGFLVRMDLDPHESHLRPTITVVDKDGLVVGFISHPEQIAGVEIVWG
Ga0307413_1123718713300031824RhizosphereDSLMRTNSPVVRPDRELNGFEVRMDLDPAESHLRPTITVVDEGGRVVGFISHPEQIPEVKIVWG
Ga0307410_1023061333300031852RhizosphereHPWHTRADSLMRPNSPVVHPDLELSGYEVRMDNDPNESHLRPTITVVDAQGRVVGFISHPEEIPDVKIVWG
Ga0307410_1072616813300031852RhizosphereDELMRTNPPVVGPDQELTGYRVRMDLEPHESHLRPTITVVDGNGCVLGFISHPEQIPGVEIVWGDE
Ga0310904_1128525913300031854SoilHTRADALMRTNSPVVRPDQELTGYLVRMDLDSSESHLRPTITVVDAEGLVIGFISHPEQVPGVEIVWG
Ga0307406_1002126413300031901RhizosphereAEGKHPWHTRADSLMRTNSPVVRPDRELEGFEVRMDLDPSESHLRPTITVVDEGGRVVGFISHPEQIPDVKIVWG
Ga0307406_1126234813300031901RhizosphereLAEGKHPWHTRADALMRTNSPVATAGQELDGFKVRMDLDPDESHLRPTITVVDDDRRVLGFISHPEQVPGVEIIWG
Ga0307407_1114399113300031903RhizosphereRPNSPIVPPDLELSGYEVRMDNDPNESHLRPTITVVDAQGRVVGFISHPEEIPDVKIVWG
Ga0307412_1177311923300031911RhizospherePWHTRADTLMRPNSPIVPPDLELSGYEVRMDNDPNESHLRPTITVVDAQGRVVGFISHPEEIPDVKIVWG
Ga0307409_10021571213300031995RhizosphereARHPMHTRADELMRTNSPVVRADQELDGYELRLDQDPTDSHLRATITVVDDEHRVVGFISHPEQVAGVSITWA
Ga0308176_1040945543300031996SoilRSDSLMRTNSPVVGPDQELTGYRVRMDLEPHESHLRPTITVVDADGCVLGFISHPEQIPGVEIVWGDG
Ga0307416_10013709353300032002RhizosphereMRTNSPVATAGQELDGYKVRMDLDPDESHLRPTITVVDDDRRVLGFISHPEQVPGVEIIW
Ga0307414_1107551723300032004RhizosphereRADTLMRPNSPIVPPDLELSGYEVRMDNDPNESHLRPTITVVDAQGRVVGFISHPEEIPDVKIVWG
Ga0307414_1148216523300032004RhizosphereLAGFLVRMDLDPHESHLRPTITVVDKDGLVVGFISHPEQIAGVEIVWG
Ga0310890_1167782623300032075SoilADSLMRTRSPVAQPDQELDGYQVRMDLDPSDSHLRPTITVVDTDGRVVGFISHPEQIAGVQIIWGE
Ga0307415_10039465333300032126RhizosphereDRELEGFEVRMDLDPNESHLRPTITVVDDAGKVVGFISHPEQIPEIKIVWG
Ga0307415_10043789413300032126RhizosphereKHPWHTRADALMRTNSPVATAGQELDGFKVRMDLDPDESHLRPTITVVDDDRRVLGFISHPEQVPGVEIIWG
Ga0307415_10235065713300032126RhizosphereTRADTLMRPNSPVVHPDLELSGYEVRMDNDPNESHLRPTITVVDGQGRVVGFISHPEELVDVKIVWG
Ga0315283_1037137813300032164SedimentELEGLELRMDLEPNESHLRPTITVVDDDRRVVGFISHPEQVPGVRVVWG
Ga0315283_1048893213300032164SedimentVGPEHELEGMELRMDLEPNESHLRPTITVIDAERRVVGFISHPEQVPGIRMVWG
Ga0307471_10050255513300032180Hardwood Forest SoilIAPDQELEGYELRMDHDPTELHLRPTITVLDDQRRVVGFISHPEQLAGVKIIWK
Ga0214472_1046902413300033407SoilTNSPVVQPDQELEGYRVRMDLDPNESHLRPTITVVDGDRRVVGFISHPEQVAGIEIVWGSHGGSHA
Ga0310811_1098927033300033475SoilSLMRTKSPVAQPDQELEGFQVRMDLDASDSHLRPTITVVDTDGRVVGFISHPEQIEGVQIIWGE
Ga0316621_1029866333300033488SoilADSLMRANTCIVSPDQELDGFEVRMDLEPTESHLRPTITVVDADRRVVGFISHPEDVPGVKVVWG
Ga0316617_10191688023300033557SoilHTRADSLMRANTCIVAPDQELDGFEVRMDLEPTESHLRPTITVVDADRRVVGFISHPEDVPGVKVVWG
Ga0364946_021021_47_2413300033815SedimentMRTNSPVVQPDQELQGYRVRMDLDPNEAHLRPTITVVDGDRRVVGFISHPEQVAGVEIVWGDHA
Ga0373902_075841_1_1473300034099Sediment SlurryLDGFELRMDHDPGELHLRPTITVLDEHGRVVGFISHPEDVPGVKIIRK
Ga0370479_0138767_2_2113300034123Untreated Peat SoilWHTRADALMRTNTTVVGPEHELEGMELRMDLEPNESHLRPTITVVDAERRVLGFISHPEQVPGIRVVWG
Ga0373950_0027218_823_10083300034818Rhizosphere SoilMRTNSPVVRPDQELTGYLVRMDLDSSESHLRPTITVVDAEGLVIGFISHPEQVPGVEIVW
Ga0373950_0038878_10_1953300034818Rhizosphere SoilMRTNSPVVRPDQELTGYQVRMDLDPTESHLRPTITVVDGDGLVIGFISHPEQVPGVEIFW

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