Metagenome / Metatranscriptome Family F043783

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F043783
Family Type	Metagenome / Metatranscriptome
Number of Sequences	155
Average Sequence Length	81 residues
Representative Sequence	MSIVQAHIDNHDYANDDKIICYFAFPRIGAAVALRPGDFLLFNPREPHSISSRCNREDDVYIISSYLKTAVVGLHDNSNPIV
Number of Associated Samples	70
Number of Associated Scaffolds	155

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	25.16 %
% of genes near scaffold ends (potentially truncated)	69.03 %
% of genes from short scaffolds (< 2000 bps)	85.16 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.677 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton (30.323 % of family members)
Environment Ontology (ENVO)	Unclassified (32.258 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (43.226 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 20.91% Coil/Unstructured: 79.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 155 Family Scaffolds
PF00171	Aldedh	0.65
PF13359	DDE_Tnp_4	0.65
PF13306	LRR_5	0.65
PF00443	UCH	0.65

COG ID	Name	Functional Category	% Frequency in 155 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.65
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.65
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.65
COG5207	Uncharacterized Zn-finger protein, UBP-type	General function prediction only [R]	0.65
COG5533	Ubiquitin C-terminal hydrolase	Posttranslational modification, protein turnover, chaperones [O]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.68 %
All Organisms	root	All Organisms	29.68 %
Gigartinaceae	family	Gigartinaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.68 %
cellular organisms	root	All Organisms → cellular organisms	27.10 %
Viruses	superkingdom	All Organisms → Viruses	2.58 %
Chondrus	genus	Gigartinaceae → Chondrus	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.68 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	26.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.58 %
Chondrus crispus	species	Gigartinaceae → Chondrus → Chondrus crispus	0.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.68 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	26.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.58 %
Chondrus crispus	species	Gigartinaceae → Chondrus → Chondrus crispus	0.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.68 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	26.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.58 %
Chondrus crispus	species	Gigartinaceae → Chondrus → Chondrus crispus	0.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.68 %
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	26.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.58 %
Chondrus crispus	species	Gigartinaceae → Chondrus → Chondrus crispus	0.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	26.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.58 %
Chondrus crispus	species	Gigartinaceae → Chondrus → Chondrus crispus	0.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.68 %
Coscinodiscophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae	26.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.58 %
Chondrus crispus	species	Gigartinaceae → Chondrus → Chondrus crispus	0.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.68 %
Thalassiosirophycidae	subclass	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae	26.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.58 %
Chondrus crispus	species	Gigartinaceae → Chondrus → Chondrus crispus	0.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.68 %
Thalassiosirales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	26.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.58 %
Chondrus crispus	species	Gigartinaceae → Chondrus → Chondrus crispus	0.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.68 %
Thalassiosiraceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae	26.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.58 %
Chondrus crispus	species	Gigartinaceae → Chondrus → Chondrus crispus	0.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.68 %
Thalassiosira	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira	26.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.58 %
Chondrus crispus	species	Gigartinaceae → Chondrus → Chondrus crispus	0.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.68 %
Thalassiosira oceanica	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	26.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.58 %
Chondrus crispus	species	Gigartinaceae → Chondrus → Chondrus crispus	0.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002279\|B570J29589_1003775	Not Available	1525	Open in IMG/M
3300002350\|B570J29583_1009058	Not Available	744	Open in IMG/M
3300002390\|B570J29645_101769	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1424	Open in IMG/M
3300002390\|B570J29645_102941	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1043	Open in IMG/M
3300002390\|B570J29645_102972	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1036	Open in IMG/M
3300002447\|JGI24768J34885_10340425	Not Available	501	Open in IMG/M
3300005805\|Ga0079957_1059796	Not Available	2272	Open in IMG/M
3300005831\|Ga0074471_10946551	Not Available	2122	Open in IMG/M
3300006040\|Ga0073914_10031577	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	942	Open in IMG/M
3300007543\|Ga0102853_1007287	Not Available	1704	Open in IMG/M
3300007543\|Ga0102853_1031387	Not Available	898	Open in IMG/M
3300007543\|Ga0102853_1095382	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	556	Open in IMG/M
3300007545\|Ga0102873_1264879	Not Available	515	Open in IMG/M
3300007558\|Ga0102822_1134916	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	583	Open in IMG/M
3300007561\|Ga0102914_1062387	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1171	Open in IMG/M
3300007561\|Ga0102914_1109238	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	861	Open in IMG/M
3300007636\|Ga0102856_1057776	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	620	Open in IMG/M
3300007649\|Ga0102912_1165874	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	634	Open in IMG/M
3300007649\|Ga0102912_1224996	Not Available	538	Open in IMG/M
3300007649\|Ga0102912_1226010	Not Available	537	Open in IMG/M
3300007649\|Ga0102912_1250950	Not Available	508	Open in IMG/M
3300007651\|Ga0102900_1103136	Not Available	617	Open in IMG/M
3300007692\|Ga0102823_1125947	Not Available	679	Open in IMG/M
3300007718\|Ga0102852_1005766	All Organisms → Viruses → Predicted Viral	2128	Open in IMG/M
3300007860\|Ga0105735_1020159	Not Available	1192	Open in IMG/M
3300007861\|Ga0105736_1094881	Not Available	642	Open in IMG/M
3300007861\|Ga0105736_1123589	Not Available	576	Open in IMG/M
3300007861\|Ga0105736_1137975	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	551	Open in IMG/M
3300007861\|Ga0105736_1146606	Not Available	538	Open in IMG/M
3300007864\|Ga0105749_1040890	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	910	Open in IMG/M
3300007864\|Ga0105749_1060551	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	780	Open in IMG/M
3300007953\|Ga0105738_1017507	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	988	Open in IMG/M
3300007955\|Ga0105740_1021891	Not Available	894	Open in IMG/M
3300007955\|Ga0105740_1024765	Not Available	854	Open in IMG/M
3300007955\|Ga0105740_1058220	Not Available	624	Open in IMG/M
3300007972\|Ga0105745_1014500	Not Available	1893	Open in IMG/M
3300007972\|Ga0105745_1067509	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1010	Open in IMG/M
3300008021\|Ga0102922_1015701	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	2207	Open in IMG/M
3300008115\|Ga0114348_1006075	Not Available	3405	Open in IMG/M
3300008119\|Ga0114354_1049666	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1798	Open in IMG/M
3300008122\|Ga0114359_1144677	Not Available	845	Open in IMG/M
3300008263\|Ga0114349_1014136	Not Available	4013	Open in IMG/M
3300008263\|Ga0114349_1030896	Not Available	2673	Open in IMG/M
3300008263\|Ga0114349_1034813	Not Available	2504	Open in IMG/M
3300008263\|Ga0114349_1057326	Not Available	1854	Open in IMG/M
3300008263\|Ga0114349_1093723	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1330	Open in IMG/M
3300008263\|Ga0114349_1095797	Not Available	1308	Open in IMG/M
3300008263\|Ga0114349_1114158	Not Available	1149	Open in IMG/M
3300008263\|Ga0114349_1119511	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1110	Open in IMG/M
3300008263\|Ga0114349_1131231	Not Available	1032	Open in IMG/M
3300008263\|Ga0114349_1141422	Not Available	973	Open in IMG/M
3300008263\|Ga0114349_1142590	Not Available	966	Open in IMG/M
3300008263\|Ga0114349_1147891	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1792	Open in IMG/M
3300008263\|Ga0114349_1157305	Not Available	892	Open in IMG/M
3300008263\|Ga0114349_1166517	Not Available	851	Open in IMG/M
3300008263\|Ga0114349_1180365	Not Available	794	Open in IMG/M
3300008263\|Ga0114349_1192521	Not Available	749	Open in IMG/M
3300008263\|Ga0114349_1197385	Not Available	732	Open in IMG/M
3300008263\|Ga0114349_1227261	Not Available	638	Open in IMG/M
3300008263\|Ga0114349_1255292	Not Available	563	Open in IMG/M
3300008263\|Ga0114349_1271803	Not Available	526	Open in IMG/M
3300008263\|Ga0114349_1272651	Not Available	524	Open in IMG/M
3300008264\|Ga0114353_1284459	Not Available	701	Open in IMG/M
3300008265\|Ga0114361_1000248	Gigartinaceae → Chondrus → Chondrus crispus	12239	Open in IMG/M
3300008265\|Ga0114361_1000371	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	11232	Open in IMG/M
3300008265\|Ga0114361_1018561	Not Available	2553	Open in IMG/M
3300008265\|Ga0114361_1022225	Not Available	2266	Open in IMG/M
3300008265\|Ga0114361_1023127	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	2206	Open in IMG/M
3300008265\|Ga0114361_1026602	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	2010	Open in IMG/M
3300008265\|Ga0114361_1031312	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1799	Open in IMG/M
3300008265\|Ga0114361_1033431	Not Available	1721	Open in IMG/M
3300008265\|Ga0114361_1042261	Not Available	1475	Open in IMG/M
3300008265\|Ga0114361_1050290	Not Available	1324	Open in IMG/M
3300008265\|Ga0114361_1103478	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	883	Open in IMG/M
3300008265\|Ga0114361_1106579	Not Available	869	Open in IMG/M
3300008265\|Ga0114361_1108610	Not Available	861	Open in IMG/M
3300008265\|Ga0114361_1111418	Not Available	849	Open in IMG/M
3300008265\|Ga0114361_1138062	Not Available	760	Open in IMG/M
3300008265\|Ga0114361_1141393	Not Available	750	Open in IMG/M
3300008265\|Ga0114361_1142365	Not Available	748	Open in IMG/M
3300008265\|Ga0114361_1152987	Not Available	720	Open in IMG/M
3300008265\|Ga0114361_1222559	Not Available	585	Open in IMG/M
3300008265\|Ga0114361_1236472	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	565	Open in IMG/M
3300008265\|Ga0114361_1261360	Not Available	531	Open in IMG/M
3300008265\|Ga0114361_1261648	Not Available	530	Open in IMG/M
3300008999\|Ga0102816_1277594	Not Available	531	Open in IMG/M
3300009026\|Ga0102829_1109062	Not Available	868	Open in IMG/M
3300009056\|Ga0102860_1036124	Not Available	1310	Open in IMG/M
3300009057\|Ga0102892_1064273	Not Available	697	Open in IMG/M
3300009079\|Ga0102814_10651614	Not Available	578	Open in IMG/M
3300009080\|Ga0102815_10059618	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	2088	Open in IMG/M
3300009080\|Ga0102815_10294559	Not Available	897	Open in IMG/M
3300009080\|Ga0102815_10358304	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	809	Open in IMG/M
3300009080\|Ga0102815_10749274	Not Available	554	Open in IMG/M
3300009141\|Ga0102884_1103311	Not Available	717	Open in IMG/M
3300009179\|Ga0115028_10466373	Not Available	908	Open in IMG/M
3300009187\|Ga0114972_10470646	Not Available	715	Open in IMG/M
3300009419\|Ga0114982_1265314	Not Available	536	Open in IMG/M
3300011009\|Ga0129318_10308960	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	541	Open in IMG/M
3300020048\|Ga0207193_1638339	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	707	Open in IMG/M
3300020048\|Ga0207193_1646262	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	702	Open in IMG/M
3300020172\|Ga0211729_11141388	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1596	Open in IMG/M
3300020510\|Ga0208086_1013507	All Organisms → Viruses → Predicted Viral	1224	Open in IMG/M
3300020512\|Ga0207936_1023961	Not Available	817	Open in IMG/M
3300020513\|Ga0208090_1042578	Not Available	592	Open in IMG/M
3300020573\|Ga0208485_1014938	All Organisms → cellular organisms → Bacteria	1669	Open in IMG/M
3300021108\|Ga0214162_1008875	Not Available	1892	Open in IMG/M
3300021108\|Ga0214162_1059434	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	630	Open in IMG/M
3300021328\|Ga0210298_1240042	Not Available	563	Open in IMG/M
3300021336\|Ga0210307_1112615	Not Available	650	Open in IMG/M
3300024346\|Ga0244775_11179540	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	597	Open in IMG/M
3300024346\|Ga0244775_11401600	Not Available	538	Open in IMG/M
3300027259\|Ga0208178_1083181	Not Available	569	Open in IMG/M
3300027320\|Ga0208923_1044281	Not Available	794	Open in IMG/M
3300027751\|Ga0208304_10163997	Not Available	813	Open in IMG/M
3300027805\|Ga0209229_10430542	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	570	Open in IMG/M
3300027806\|Ga0209985_10398461	Not Available	598	Open in IMG/M
3300027836\|Ga0209230_10432070	Not Available	752	Open in IMG/M
3300027836\|Ga0209230_10480556	Not Available	706	Open in IMG/M
3300032093\|Ga0315902_11143404	Not Available	566	Open in IMG/M
3300033557\|Ga0316617_102038091	Not Available	590	Open in IMG/M
3300033978\|Ga0334977_0302887	Not Available	769	Open in IMG/M
3300033978\|Ga0334977_0519174	Not Available	541	Open in IMG/M
3300033984\|Ga0334989_0026684	All Organisms → Viruses → Predicted Viral	3090	Open in IMG/M
3300033984\|Ga0334989_0033688	Not Available	2770	Open in IMG/M
3300033984\|Ga0334989_0048394	Not Available	2328	Open in IMG/M
3300033984\|Ga0334989_0054356	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	2199	Open in IMG/M
3300033984\|Ga0334989_0075661	Not Available	1859	Open in IMG/M
3300033984\|Ga0334989_0085297	Not Available	1747	Open in IMG/M
3300033984\|Ga0334989_0114186	All Organisms → Viruses → Predicted Viral	1500	Open in IMG/M
3300033984\|Ga0334989_0212098	Not Available	1060	Open in IMG/M
3300033984\|Ga0334989_0234103	Not Available	999	Open in IMG/M
3300033984\|Ga0334989_0273609	Not Available	907	Open in IMG/M
3300033984\|Ga0334989_0274072	Not Available	906	Open in IMG/M
3300033984\|Ga0334989_0564617	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	552	Open in IMG/M
3300033995\|Ga0335003_0227809	Not Available	876	Open in IMG/M
3300034018\|Ga0334985_0461203	Not Available	743	Open in IMG/M
3300034021\|Ga0335004_0212125	Not Available	1200	Open in IMG/M
3300034022\|Ga0335005_0213259	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1190	Open in IMG/M
3300034022\|Ga0335005_0553288	Not Available	631	Open in IMG/M
3300034064\|Ga0335001_0237558	Not Available	1008	Open in IMG/M
3300034064\|Ga0335001_0380365	Not Available	760	Open in IMG/M
3300034064\|Ga0335001_0399246	Not Available	738	Open in IMG/M
3300034064\|Ga0335001_0401166	Not Available	736	Open in IMG/M
3300034066\|Ga0335019_0526871	Not Available	702	Open in IMG/M
3300034105\|Ga0335035_0615145	Not Available	572	Open in IMG/M
3300034105\|Ga0335035_0732042	Not Available	503	Open in IMG/M
3300034167\|Ga0335017_0026536	Not Available	3375	Open in IMG/M
3300034167\|Ga0335017_0040942	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	2732	Open in IMG/M
3300034167\|Ga0335017_0052254	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	2412	Open in IMG/M
3300034168\|Ga0335061_0225405	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	989	Open in IMG/M
3300034168\|Ga0335061_0240708	Not Available	953	Open in IMG/M
3300034168\|Ga0335061_0430446	Not Available	679	Open in IMG/M
3300034168\|Ga0335061_0442663	Not Available	667	Open in IMG/M
3300034280\|Ga0334997_0037732	Not Available	3326	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.06%
Terrestrial	Environmental → Terrestrial	1.94%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	67.10%
Marine	Environmental → Aquatic → Marine	30.32%
Soil	Environmental → Terrestrial → Soil	1.29%
Sediment	Environmental → Aquatic → Sediment	0.65%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.65%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	55.48%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	20.00%
Lentic	Environmental → Aquatic → Freshwater → Lentic	10.32%
Coastal	Environmental → Aquatic → Marine → Coastal	9.03%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.29%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.65%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.65%
Sand	Environmental → Terrestrial → Soil → Sand	0.65%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	54.19%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	20.00%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	9.03%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	6.45%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.87%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.29%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.29%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.65%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.65%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.65%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	30.32%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	21.94%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	20.00%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	8.39%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	3.23%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	3.87%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	2.58%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	1.29%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.29%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.65%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.65%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.65%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.65%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.65%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.65%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.65%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.65%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	0.65%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002279	Freshwater microbial communities from Lake Mendota, WI - 29APR2009 deep hole epilimnion ns	Environmental	Open in IMG/M
3300002350	Freshwater microbial communities from Lake Mendota, WI - 13JUL2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002390	Freshwater microbial communities from Lake Mendota, WI - 02APR2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002447	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300005831	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.43_YBM	Environmental	Open in IMG/M
3300006040	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_30-Apr-14	Environmental	Open in IMG/M
3300007543	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-3	Environmental	Open in IMG/M
3300007545	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-3	Environmental	Open in IMG/M
3300007558	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.733	Environmental	Open in IMG/M
3300007561	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-3	Environmental	Open in IMG/M
3300007636	Estuarine microbial communities from the Columbia River estuary - metaG 1371A-3	Environmental	Open in IMG/M
3300007649	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-3	Environmental	Open in IMG/M
3300007651	Estuarine microbial communities from the Columbia River estuary - metaG 1555C-3	Environmental	Open in IMG/M
3300007692	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743	Environmental	Open in IMG/M
3300007718	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-3	Environmental	Open in IMG/M
3300007860	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1372A_3um	Environmental	Open in IMG/M
3300007861	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1372B_3um	Environmental	Open in IMG/M
3300007864	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461B_3.0um	Environmental	Open in IMG/M
3300007953	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373A_3um	Environmental	Open in IMG/M
3300007955	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373B_3.0um	Environmental	Open in IMG/M
3300007972	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0um	Environmental	Open in IMG/M
3300008021	Estuarine microbial communities from the Columbia River estuary - metaG 1569A-3	Environmental	Open in IMG/M
3300008115	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-100-LTR	Environmental	Open in IMG/M
3300008119	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NA	Environmental	Open in IMG/M
3300008122	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample HABS-E2014-0124-100-LTR	Environmental	Open in IMG/M
3300008263	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-53-LTR	Environmental	Open in IMG/M
3300008264	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-53-LTR	Environmental	Open in IMG/M
3300008265	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0126-100-LTR	Environmental	Open in IMG/M
3300008999	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009056	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3	Environmental	Open in IMG/M
3300009057	Estuarine microbial communities from the Columbia River estuary - metaG 1553A-3	Environmental	Open in IMG/M
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental	Open in IMG/M
3300009080	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759	Environmental	Open in IMG/M
3300009141	Estuarine microbial communities from the Columbia River estuary - metaG 1550A-3	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009187	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300011009	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_DNA	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020510	Freshwater microbial communities from Lake Mendota, WI - 06JUL2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020512	Freshwater microbial communities from Lake Mendota, WI - 19NOV2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020513	Freshwater microbial communities from Lake Mendota, WI - 20JUL2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020573	Freshwater microbial communities from Lake Mendota, WI - 17JUL2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021108	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300021328	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R877 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021336	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1073 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300027259	Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3 (SPAdes)	Environmental	Open in IMG/M
3300027320	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)	Environmental	Open in IMG/M
3300027751	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713 (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300027806	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG (SPAdes)	Environmental	Open in IMG/M
3300027836	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300033978	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002	Environmental	Open in IMG/M
3300033984	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Mar2001-rr0030	Environmental	Open in IMG/M
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental	Open in IMG/M
3300034018	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021	Environmental	Open in IMG/M
3300034021	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M
3300034064	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental	Open in IMG/M
3300034168	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME06Apr2016-rr0183	Environmental	Open in IMG/M
3300034280	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME10Aug2009-rr0048	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J29589_10037752	3300002279	Freshwater	MSIVQAHIDNHDYQXNDRIVCYFAFPRIGIAVALRPGDFLLFDPQEPHSISSRCKAEDEIFCASSYLKTAIVGLNDNSNTVV*
B570J29583_10090581	3300002350	Freshwater	NHDYQLNDRIVIYFAFPRIGIAVALRPGDFLLFDPQEPHSISSCCKAEDKIFCASSYLKTAIVGLNDNSNTVV*
B570J29645_1017691	3300002390	Freshwater	TMSIVQAHIDNHDYANDDKIICYFAFPRIGTAVALRPGDFLLFNPREPHSVSSRCNREDDVYIISSYLKTAVVGLHDNSDPIV*
B570J29645_1029411	3300002390	Freshwater	TMSIVQAHIDNHDYANDDKIICYFAFPRIGAAVALRPGDFLLFNPREPHSVSSRCNREDDVYIISSYLKTAVVGLHDNSDPIV*
B570J29645_1029721	3300002390	Freshwater	DFTMSIVQAHIDNHDYANDDKIICYFAFPRIGAAVALRPGDFLLFNPREPHSISSRCNREDDVYIISSYLKTAVVGLHDNSNPIV*
JGI24768J34885_103404251	3300002447	Freshwater And Sediment	DFTMSIVQAHIDNHDYANDDKIICYFAFPRIGVAVALRPGDFLLFNPHEPHSISSRCNREDDVYIISSYLKTAVVGLNDNSDPKV*
Ga0079957_10597963	3300005805	Lake	HVDRDFTMSIVQAHIDNHVYQFDDKILCYFAFPRIGLAVALRPGDFLLFNPQEPHSISSRCRKEDEIYCISSYLKTNVVGLNDNSNHVV*
Ga0074471_109465512	3300005831	Sediment (Intertidal)	MSIVQAHIDNHDYQLNDRIVCYFAFPRIGIAVALRPGDFLLFDPQEPHSISSRCKAEDEIFCASSYLKTAIVGLNDNSNTVV*
Ga0073914_100315772	3300006040	Sand	TDKDFTMSIVQVHLDNIMYHNEDRIVCYFTFPRLGIAVALRPGDILMFNPQEPHCISSRCNEEDEIYCISCYLKTQVVGLNDNSNTVI*
Ga0102853_10072872	3300007543	Estuarine	MSIVQAHIDNHDYVMDDKVICYFAFPRIGVAVALRPGDFLLFNPNEPHSISSRCNREDDVYIISSYLKTAVVGLNDNSNPIV*
Ga0102853_10313872	3300007543	Estuarine	YLRSHIDADFTMSIVQAHIDNHDYANDDKIICYFAFPRIGVAVALRPGDFLLFNPHEPHSISSRCNREDDVYIISSYLKTAVVGLNDNSDPKV*
Ga0102853_10953821	3300007543	Estuarine	YLRSHIDADFTMSIVQAHIDNHDYANDDKIICYFAFPRIGAAVALRPGDFLLFNPREPHSISSRCNREDDVYIISSYLKTAVVGLHDNSNPIV*
Ga0102873_12648791	3300007545	Estuarine	RSHIDADFTMSIVQAHIDNHTYQIDDRIICYFAFPRIGVSVALQPGDFLLFNPTEPHCVSSRCRADDDIYIISSYLKTAIVGLNDNTNPIV*
Ga0102822_11349161	3300007558	Estuarine	VQAHIDNHNYQIDDRIVCYFAFPRIGVSVALRPGDFLLFNPTEPHCVSSRCRADDDIYIISSYLKTAVVGLNDNTNPIV*
Ga0102914_10623874	3300007561	Estuarine	FTMSIVQVHMDDIMYHNEDRIVCYFTFPRLGIAVSLRPGDILMFNPQEPHCISSRCNEEDEIYCISYYLKTQVVGLNDNSNTVI*
Ga0102914_11092381	3300007561	Estuarine	VQATIDNQDYVIDDKVICYFAFPRVGVAVALRPGDFLLFNPREPHSISSRCRREDDIYIISSYLKTAVVGLNDNSNPIV*
Ga0102856_10577761	3300007636	Estuarine	QAHIDNHDYANDDKIICYFAFPRIGAAVALRPGDFLLFNPREPHSISSRCNREDDVYIISSYLKTAVVGLHDNSNPIV*
Ga0102912_11658741	3300007649	Estuarine	VQAHLDTQKYNYNDPVICYFAFPRLGMAVALQPGDYLLFNPQEYHCILSRCEIENEIYSISSYLKTAIVGLNDNSNRTV*
Ga0102912_12249961	3300007649	Estuarine	VDDKILCYFAFPRIGLAVALRPGDFLLFNPQEPHSISSRCRKEDEIFCISSYLKTDVVGLNNNSNPVV*
Ga0102912_12260101	3300007649	Estuarine	DNHNYANDDKIICYFAFPRIGVAVALRPGDFLLFNPQEPHSVSSRCNREDDIFIISSYLKTGVVGLNDNSDPIV*
Ga0102912_12509501	3300007649	Estuarine	DNHNYANDDKIICYFAFPRIGVAVALRPGDFLLFNPQEPHSVSSRCNREDDIFIISSYLKTAVVGLNDNSDPIV*
Ga0102900_11031361	3300007651	Estuarine	IDEHDYIVKDKIICYFAFPRIGIAVALRPGDFLIFNPQEPHSISSRCNVEDEVYCISSYLKTAVVGLNDNSNMVI*
Ga0102823_11259472	3300007692	Estuarine	VDDKIVCYFAFPRIGIAVALRPGDFLLFNPQEPHSISSRCRKEDEIFCISSYLKTDVVGLNDNSNPVV*
Ga0102852_10057662	3300007718	Estuarine	MSIVQAHIDNHTYQIDDRIVCYFAFPRIGVSVALRPGDFLLFNPTEPHCVSSRCRADDDIYIISSYLKTAIVGLNDNTNPIV*
Ga0105735_10201591	3300007860	Estuary Water	MSIVQAHIDNHDYQVNDRIVCYFAFPRIGIAVALRPGDFLLFDPQEPHSISSRCKAEDEIFCASSYLKTAIVGLNDNSNTVV*
Ga0105736_10948811	3300007861	Estuary Water	DNHDYANDDKIICYFAFPRIGAAVALRPGDFLLFNPHEPHSISSRCNREDDVYIISSYLKTAVVGLHDNSNLIV*
Ga0105736_11235891	3300007861	Estuary Water	LRSHIDADFTMSIVQVHIDNHDYVMDDKVICYFAFPRIGVAVALRPGDFLLFNANEPHSISSRCNREDDVYVISSYLKTAVVGLNDNSNPIV*
Ga0105736_11379751	3300007861	Estuary Water	DFTMSIVQAHIDNHNYQIDDRIVCYFAFPRIGVSVALRPGDFLLFNPTEPHCVSSRCRTDDDIYIISSYLKTAIVGLNDNTNPIV*
Ga0105736_11466061	3300007861	Estuary Water	YLRSHVDMDFTMSIVQAHIDNHNYANDDKIICYFAFPRIGVAVALRPGDFLLFNPQEPHSVSSRCNREDDIFIISSYLKTGVVGLNDNSDPIV*
Ga0105749_10408901	3300007864	Estuary Water	QDYVIDDKVICYFAFPRIGVAVALRPGDFLLFNPREPHSISSRCRREDDIYIISSYLETAVVGLNDNSNPIV*
Ga0105749_10605511	3300007864	Estuary Water	MSIVQAHIDNHTYQIDDRIVCYFAFPRIGVSVALRPGDFLLFNPTEPHCVSSRCRADDDIYIISSYLKTA
Ga0105738_10175071	3300007953	Estuary Water	IDADFTMSIVQAHIDNHDYANDDKIICYFAFPRIGAAVALRPGDFLLFNPREPHSISSRCNREDDVYIISSYLKTAVVGLHDNSNPIV*
Ga0105740_10218913	3300007955	Estuary Water	DQDFTMSIVQAHIDEHDYIVKDKIICYFAFPRIGIAVALRPGDFLIFNPQEPHSISSRCNVEDEVYCISSYLKTAVVGLNDNSNMLV*
Ga0105740_10247654	3300007955	Estuary Water	VFLRSLDDQDFTMSIVQAHIDEHDYIVKDKIICYFAFPQIGIAVALRPGDFLIFNPQEPHSISSRCNVEDEVYCISSYLKTAVVGLNDNSNMVI*
Ga0105740_10582201	3300007955	Estuary Water	RSHIDADFTMSIVQAHIDNHDYANDDKIICYFAFPRIGVAVALRPGDFLLFNPHEPHSISSRCNREDDVYIISSYLKTAVVGLNDNSDPKV*
Ga0105745_10145001	3300007972	Estuary Water	MSIVQAHIDNHDYQLNDRIVVYFAFPRIGIAVALRPGDFLLFDPQEPHSISSCCKAEDKIFCASSYLKTAIVGLNDNSNTVV*
Ga0105745_10675092	3300007972	Estuary Water	SIVQVHLDNIMYHNEDRIVCYFTFPRMGIAVALRPGDILMFNPQEPHCISSRCNEEDEIYCISCYLKTQVVGLNDNSNTVI*
Ga0102922_10157012	3300008021	Estuarine	MSIVQAHIDNHNYQIDDRIVCYFAFPRIGVSVALRPGDFLLFNPTEPHCVSSRCRADDDIYIISSYLKTAIVGLNDNTNPIV*
Ga0114348_10060754	3300008115	Freshwater, Plankton	MSIVQAHIDNHDYVMDDKVICYFAFPRIGVAVALRPGDFLLFNPNEPHSISSRCNREDDVYIISSYLKTAVVGINDNSNPTV*
Ga0114354_10496661	3300008119	Freshwater, Plankton	LRSHIDADFTMSIVQAHIDNHNYQIDDRIVCYFAFPRIGVSVALRPGDFLLFNPTEPHCVSSRCRADDDIYIISSYLKTAIVGLNDNTNLIV*
Ga0114359_11446771	3300008122	Freshwater, Plankton	RSHIDRDFTMSIVQAHIDNHDYQVNDRIVCYFAFPRIGLAVALRPGDFLLFDPQEPHSISSRCKAEDEIFCASSYLKTAIVGLNDNSNTVV*
Ga0114349_10141363	3300008263	Freshwater, Plankton	MSIVQAHIDNHDYQVNDRIVIYFAFPRIGIAVALRPGDFLMFDPQEPHSISSRCKAEDKIFCASSYLKSAIVGLNDNSNTVV*
Ga0114349_10308963	3300008263	Freshwater, Plankton	MSIVQVHIDNHDYVINDKVICYFAFPRIEVAVALWAGDFLLFNPHEPHSISSCCRREDNVYVISSYLKMAVVGLNDNSNPIMMSLVKKK*
Ga0114349_10348132	3300008263	Freshwater, Plankton	MSIVQAHIDNHDYQLNDRIVCYFAFPRIGIAVALRPGDFLLFDPQEPHSISSRCKAEDEIFCASSYLKMAIVGLNDNSNTVV*
Ga0114349_10573261	3300008263	Freshwater, Plankton	MSIVQAHIDNHDYQVNDRIVCYFAFPRIGIAVALRPGDFLLFDPQEPHSISSRCKAEDEMFYASSYLKTAIVGLNDNSNTVV*
Ga0114349_10937233	3300008263	Freshwater, Plankton	MSIVQAHIDNHDYQVNDRIVCYFAFPRIGIAVALWPGDFLLFDPQEPHSISSRCKAEDEIFCASSYLKRAIVGLNDNSNTVV*
Ga0114349_10957971	3300008263	Freshwater, Plankton	IDNHDYVMDDKVICYFAFPRIGVAVALRPGDFLPFNPNEPHSISSRCNREDDVYIISSYLKTALVGLNDNSNPIV*
Ga0114349_11141583	3300008263	Freshwater, Plankton	NDDKIICYFAFPRIGVAVALRPGDFLLFNPHEPHSISSRCNREDDIFIISSYLKTAVVGLHDNSDPIV*
Ga0114349_11195112	3300008263	Freshwater, Plankton	MSIVQAYIDNHDYANDDKIICYFVFPRIGLAVALRPGDFLLFNPREPHSISSRCNRDDDIFIISSYLKTAVVGLHDKSDPIV*
Ga0114349_11312311	3300008263	Freshwater, Plankton	MSIVQAHIDNHDYQVNDRIVCYFAFPRIGIAVALRPGDFLLFDPQEPHFISSCCKAEDEIFFASSYLKTAIVGLNDNSNTVV*
Ga0114349_11414221	3300008263	Freshwater, Plankton	QAHIDNHDYANEDTIICYFAFPRIGAAVALWPGDFLLFNPHEPQSISSCCNREDDVYIISSYLKTTVVGLNDNSDPIV*
Ga0114349_11425901	3300008263	Freshwater, Plankton	QAHIDNHDYANEDTIICYFAFPRIGAAVALWPGDFLLFNPHEPPSISSRCNREDDVYIISSYLKTAVVGLNDNSDPIV*
Ga0114349_11478911	3300008263	Freshwater, Plankton	DADFTMSIVQAHIDNHDYANDDKIICYFAFPRIGAAVALRPGDFLLFNPREPHSILSCCNREDDVYIISSYLKTAVVGLHDNSDPTV*
Ga0114349_11573051	3300008263	Freshwater, Plankton	SHIDADFTMSIVQAHIDNHDYANDDKIICYFAFPGIGAAFALRPGDFLLFNPCEPHSISSRCNREDDVYIISSYLKTAVVGLHDNSNPIM*
Ga0114349_11665171	3300008263	Freshwater, Plankton	DDKIICYFAFPRIGVAVALQPGDFLLFNPHEPHSISSLCNREDDIFIISSYLKTAVVGFHDNSNPIV*
Ga0114349_11803651	3300008263	Freshwater, Plankton	AHIDNHDYVMDDKVICYFAFPRIGVAVALRPGDFLLFNPNEPHSISSRCNREDDVYIISSYLKTAVVGLNDNSNPIV*
Ga0114349_11925211	3300008263	Freshwater, Plankton	SHIDADFTMSIVQAHIDNHDYANDDNIICYFAFPRIGAAVALRPGYFLLFNPREPHSISSRCNQEDDVYIISSNLKTAVVGLHDNSNPIV*
Ga0114349_11973852	3300008263	Freshwater, Plankton	NDDKIICYFAFPRIGVAVALRPGDFLLFNPHEPHSISSCCNREDDIFIVSSYLKTAVVGLHDNSDPLV*
Ga0114349_12272611	3300008263	Freshwater, Plankton	SHIDADFTMSIVQAHIDNHDYANDDKIICYFAFPRIGVAVALQPGDFLLFNPHEPHSISSRCNREDDVYIISSYLKTAVVGLNDNSDPIV*
Ga0114349_12552921	3300008263	Freshwater, Plankton	MSIVEAHIDNHNYANDDKIICYFAFPRIGVAVALWPGDFLLFNPHEPHSISSRCNREDDVYIISSYLKTAVV
Ga0114349_12718032	3300008263	Freshwater, Plankton	MSIVQEHIDNHDYANDDKIICYFAFPRIGVAVALRPGDFLLFNPHEPHSISSRCNREDDVYIISSYLKTAVVG
Ga0114349_12726511	3300008263	Freshwater, Plankton	DDKIICYFAFPRIGVAVALRPGDFLLFNPHEPHSISSLCNREDDVYIISSYLKTAVVGLNDNSDPRV*
Ga0114353_12844591	3300008264	Freshwater, Plankton	NDFTMSIVQVHIDNSYQVDDRIVCYFAFPRIGIAVALRPGDFLLFNPQEPHSISSRCRAEDELFAVSYYLKPL*
Ga0114361_10002486	3300008265	Freshwater, Plankton	MSIVQAHIDNHNYVIDDKVKCYFAFPRIGVAVALCPGDFLLFNPHEPHSISSCCRREDDIFIISSYLKMTVVGLNDNSNPIV*
Ga0114361_10003712	3300008265	Freshwater, Plankton	MSIVQAHIDNHDYQVNDRIAIYFAFQRIGIAVALRPGDFLLFDPQEPHSISSRCKAEDKIDCASSYLKMAIVGLNDNSNTVV*
Ga0114361_10185611	3300008265	Freshwater, Plankton	MSIVQVHIDNHDYVINDKVICYFAFPRIEVAVALWAGDFLLFNPHEPHSISSCCRREDNVYVISSYLKMAVVGLNDNSNPIV*
Ga0114361_10222251	3300008265	Freshwater, Plankton	MSIIQAHIDNHDYQVNDRIVCYFAFLRIGIAVALRPDDFLLLDPQEPHSISSCCKAEDEIICASSYLKTAIVGLNDNSNTVV*
Ga0114361_10231271	3300008265	Freshwater, Plankton	VQAHIDNHDYANDDKIICYFAFPRIGVAVALRPGDFLLFNPREPHSIPSRCNKEDDIFIISSYLKTAVVGLHDNSDLIV*
Ga0114361_10266022	3300008265	Freshwater, Plankton	RDFTMSIVQAHIDNHDYQVNDRIVCYFAFPRIGIAVALWPGDFLLFDPQEPHSISSRCKAEDEIFCASSYLKRAIVGLNDNSNTVV*
Ga0114361_10313122	3300008265	Freshwater, Plankton	LRSHVDADFTMSIVQAYIDNHDYANDDKIICYFVFPRIGLAVALRPGDFLLFNPREPHSISSRCNRDDDIFIISSYLKTAVVGLHDKSDPIV*
Ga0114361_10334311	3300008265	Freshwater, Plankton	HDYANDDKIICYFAFPRIGAAVALRPGDFLLFNPREPQSISSRCNKEDDVYIISSYLKTAVVGLHDNSNPIV*
Ga0114361_10422612	3300008265	Freshwater, Plankton	MSIVQAHLDNHDYANDDKIICYFAFPRIGVAVALRPVDFLLFKPHEPHSISSRCNREDDIFIISSYHKTAVVGLHDNSEPIV*
Ga0114361_10502901	3300008265	Freshwater, Plankton	SHIDADFTMSIVQAHIDNHDYANDDKIICYFAFPRIGAAVALRPGDFLQFNPREPHSISSRCNREDDVYIISSYLKIAVVGLHDNSNPIV*
Ga0114361_11034781	3300008265	Freshwater, Plankton	MSIVQAHIDNHDYANDDKIICYFAFPRIGVAVALRPGDLLLFNPHEPHSISSRCNIEDDVYFISSYLKTAVVGLNDNSDPNV*
Ga0114361_11065792	3300008265	Freshwater, Plankton	YANDDKIICYFAFPRIGVAVALWPGDFLLFNPHEPHSISSRCNREDDIFIISTYLKTAVVGLHDNSEPIVWCQ*
Ga0114361_11086102	3300008265	Freshwater, Plankton	LRSHIDADFTMSIVQAHIDNHDYANDDKIICYFAFTRIGAAVALWPGDFLLLNPHEPHSSSSHCNREDDVYIISSYLKTAVVGLNDNSDPIVCCQ*
Ga0114361_11114181	3300008265	Freshwater, Plankton	SIVQAHIDNHDYANDDKIICYFTFPRIGVAVALRPGDFLLFNPHEPHSISSRCNREDDVYIISSYLKTAVVGLYDNSDPKV*
Ga0114361_11380622	3300008265	Freshwater, Plankton	MSIVQAHIDNHDYANDDKIICYFAFPRIGVAVALQLGDILLFNPHEPHSISSRCNREDDVYIISSYLKTAVVGLNDNSDPKV*
Ga0114361_11413932	3300008265	Freshwater, Plankton	MSIVQAHIHNHDYQVNGRIVCYFAFLRIGIAVALRPGDFLLFDPQEPHSISSRCKAEDEMFYASSY
Ga0114361_11423651	3300008265	Freshwater, Plankton	HIDNHDYANDDKIICYFAFPRIGAAVALRPGDFLLFNPYEPHSISSRCNREDDVYIISSYLKTAVVGLHDNSNPIV*
Ga0114361_11529871	3300008265	Freshwater, Plankton	VQAHIDNHDYANDDKIICYFAFPRIGVAVALRPGDFLLFNPHEPHSISSRCNREDDVYIISSYLKTAVVALNDNSDAKV*
Ga0114361_12225591	3300008265	Freshwater, Plankton	LRSHIDADFTTSIVQAHIDNHDYASDDKIKCYFAFPRIGVAVALRPGDFLLFNPHEPHSISSRCNREDDVYIISSYLKTAVVGLNDNSDPKV*
Ga0114361_12364722	3300008265	Freshwater, Plankton	MSIVQAHIDNHDYTNDDKIICYFAFPRIGAAVALRPGDFLLFNPREPHSISSCCNREDDVYIISSYLKTAVVGLHDNSNPIV*
Ga0114361_12613601	3300008265	Freshwater, Plankton	DRDFTMSIVQAHIDNHDYQLNDRIVCYFAFPRIGIAVALRPGDFLLFDPQEPHSISSCCKAEDEIFCASSYLKTAIVGLNDNSNTVV*
Ga0114361_12616481	3300008265	Freshwater, Plankton	MSIVQAHIDNHNYVMDDKVICYFAFPRIGVAVALRPGDFLLFNPNEPHSISSRCNREDDVYII
Ga0102816_12775941	3300008999	Estuarine	DYQLNERLVCYFAFPRIGLAVALGPGDFLLFDPQEPHSISSRCKAEDEIFCASSYLKTAIVGLNDNSNTVV*
Ga0102829_11090622	3300009026	Estuarine	MSIVQAHIDNHDYQLNDRIVCYFAFPRIGIAVALRPGDFLLFDPQEPHSISSRCKAEDEIFCASSY
Ga0102860_10361242	3300009056	Estuarine	MSIVQAHIDNHDYQLNDRIVIYFAFPRIGIAVALRPGDFLLFDPQEPHSISSCCKAEDEIFCASSYLKTAIVGLNDNSNTVV*
Ga0102892_10642733	3300009057	Estuarine	QDFTMSIVQAHIDEHDYIVKDKIICYFAFPRIGIAVALRPGDFLIFNPQEPHSISSRCNVEDEVYCISSYLKTAVVGLNDNSNMLV*
Ga0102814_106516141	3300009079	Estuarine	AHIDNHDYVIDDKVICYFAFPRIGVAVALRPGDFLLFNPNEPHSISSRCSREDDIFIISSYLKMAVVGLNDNSNSIV*
Ga0102815_100596181	3300009080	Estuarine	VHMDDIMYHNEDRIVCYFTFPRLGIAVALRPGDILMFNPQEPHCISSRCNEEDEIYCISCYLKTQVVGLNDNSNTVI*
Ga0102815_102945592	3300009080	Estuarine	YLRSHIDRDFTMLIVQVHIDNHVYQVDDKILCYFAFPRIGLAVALWPGDFLLFNPQEPHSVSSRCRKKDEIFCISSYLKMDVVGLNDNSNPVV*
Ga0102815_103583041	3300009080	Estuarine	NYNDPVICYFAFPRLGMAIALQPGDYLLFNPQEYHCISSRCEIENEIYSISSYLKTAIVGLNDNSNHTV*
Ga0102815_107492741	3300009080	Estuarine	DADFTMSIVQAHIDNHDYANDDKIICYFAFPRIGVAVVLQPGDFLLFNPHEPHSISSRCNREDDVYIISSYLKTAVVGLNDNSDPKV*
Ga0102884_11033111	3300009141	Estuarine	IDNHDYVMDDKVICYFAFPRIGVAVALRPGDFLLFNPNEPHSVSSRCKREDDVYIISSYLKTAAVGLNDNSNPKV*
Ga0115028_104663733	3300009179	Wetland	MSTVTLLSIVQVHIDNHVYHFDDKILCYFAFPRIGLAVALRPGDFLLFNPQEPHSISSRCRKEDEIYCISSYLKTNVVGLNDNSNHVV*
Ga0114972_104706461	3300009187	Freshwater Lake	FTMSIVQAHIDNYDYQMHDRIICYFTFPRIGLAVALRPGDFLLFNPQEPHSISPRCKAENEVYVISSYLKTAVVGGNDNSNTVV*
Ga0114982_12653141	3300009419	Deep Subsurface	SIVQAHIDNYDYQMEDRIICNFTFPRLGLAVALQPGDFLLFNPQESHSISSQCKAEDEVYVISSYLKTAVVGGHDNSNTAVYD*
Ga0129318_103089601	3300011009	Freshwater To Marine Saline Gradient	HIDNHDYANDDKIICYFAFPRIGTAVALRPGDFLLFNPREPHSVSSRCNREDDVYIISSYLKTAVVGLHDNSDPIV*
Ga0207193_16383391	3300020048	Freshwater Lake Sediment	MSIVQAHIDNHDYANDDKIICYFAFPRIGAAVALRPGDFLLFNPREPHSISSRCNREDDVYIISSYLKTAVVGLHDNSNPIV
Ga0207193_16462621	3300020048	Freshwater Lake Sediment	AHIDNHDYANDDKIICYFAFPRIGAAVALRPGDFLLFNPREPHSISSRCNREDDVYIISSYLKTAVVGLHDNSNPIV
Ga0211729_111413882	3300020172	Freshwater	MSIVQAHIDNHNYQIDDRIVCYFAFPRIGVSVALRPGDFLLFNPTEPHCVSSRCRADDDIYIISSYLKTAIVGLNDNTNFIV
Ga0208086_10135072	3300020510	Freshwater	MSIVQVHIDNSYQVDDRIVCYFAFPRIGIAVALRPGDFLLFNPQEPHSISSRCRAEDELFAVSYYLKTAVVGLNDNKNLRV
Ga0207936_10239612	3300020512	Freshwater	DFTMSIVQAHIDNHDYANDDKIICYFAFPRIGAAVALRPGDFLLFNPHEPHSISSRCNREDDVYIISSYLKTAVVGLHDNSNLIV
Ga0208090_10425781	3300020513	Freshwater	DNHDYVINDKVICYFAFPRIGVAVALRPGDFLLFNPNEPHSISSRCSREDDIFIISSYLKMAVVGLNDNSNCIV
Ga0208485_10149383	3300020573	Freshwater	DFTMSIVQAHIDNHDYVIDDKVICYFAFPRIGVAVALRPGDFLLFNPNEPHSISSRCSREDDIFIISSYLKTAVVGLNDNSNPIV
Ga0214162_10088752	3300021108	Freshwater	DRIVCYFAFPRIGIAVALRPGDFLLFDPQEPHSISSRCKAEDEIFCASSYLKTAIVGLNDNSNTVV
Ga0214162_10594341	3300021108	Freshwater	ADFTMSIVQAHIDNHDYANDDKIICYFAFPRIGAAVALRPGDFLLFNPREPHSISSRCNREDDVYIISSYLKTAVVGLHDNSNPIV
Ga0210298_12400421	3300021328	Estuarine	MSIVQAHIDNHDYVMDDKVICYFAFPRIGVAVALRPGDFLLFNPNEPHSISSRCNREDDVYVISSYLKTAVVGLNDNSNPIVTGLATHVRT
Ga0210307_11126151	3300021336	Estuarine	QVDDKIVCYFAFPRIGIAVALRPGDFLLFNPQEPHSISSRCRTEDEIYCISSYLKTAVVGLNDNSNSIV
Ga0244775_111795401	3300024346	Estuarine	EDRIVCYFTFPRLGIAVALRPGDILMFNPQEPHCISSRCNEEDEIYCISCYLKTQVVGLNDNSNTVI
Ga0244775_114016001	3300024346	Estuarine	VYQVDDKILCYFAFPRIGLAVALRPGDFLLFNPQEPHSISSRCRKEDEIFCISSYLKTDVVGLNDNSNPVV
Ga0208178_10831811	3300027259	Estuarine	VDMDFTMSIVQAHIDNHNYANDDKIICYFAFPRIGVAVALRPGDFLLFNPQEPHSVSSRCNREDDIFIISSYLKTGVVGLNDNSDPIV
Ga0208923_10442811	3300027320	Estuarine	GINVYLRSHIDQDFTMSVVQAHIDDHDYQVDDRIICYFAFPRIGRAVALRPGDFLLFNPQEPHSISSRCCAGDEVFCISSYLKTGVVGDNDNSNTVV
Ga0208304_101639971	3300027751	Estuarine	FTMSIVQAHIDNHDYVMDDKVICYFAFPRIGVAVALRPGDFLLFNPNEPHSVSSRCKREDDVYIISSYLKTAVVGLNDNSNPKV
Ga0209229_104305421	3300027805	Freshwater And Sediment	DNDFTMSIVQAHLDTQKYNYNDPVVCYFAFPRLGMAVALRPGDYLLFNPQEYHCISSRCEIQKEIYSISSYLKTAIVGLNDNSNHTV
Ga0209985_103984612	3300027806	Freshwater Lake	QVDDRIVCYFAFPRIGIAVALRPGDFLLFNPQEPHSISSRCRAEDELFAVSYYLKTAVVGLNDNKNLRV
Ga0209230_104320701	3300027836	Freshwater And Sediment	VQAHIDNHDYQLNDRIVCYFAFPRIGIAVALRPGDFLLFDPQEPHSISSRCKAEDEIFCASSYLKTAIVGLNDNSNTVV
Ga0209230_104805561	3300027836	Freshwater And Sediment	HDYQVNDRIVCYFAFPRIGIAVALRPGDFLLFDPQEPHSISSRCKAEDEIFCASSYLKTAIVGLNDNSNTVV
Ga0315902_111434042	3300032093	Freshwater	DDKIICYFAFPRIGVAVALRPGDFLLFNPQEPHSVSSRCNREDDIFIISSYLKTAVVGLNDNSDPIV
Ga0316617_1020380912	3300033557	Soil	MSIVQAHIERQGYKNCDAVICYFAFPRIGIAVALRPGDFLLFNPQEPHCISSRCQNGDEIFSLSSYLKTAIVGLNDNSNTTI
Ga0334977_0302887_2_250	3300033978	Freshwater	MLIVQVHIDNHVYQVDDKILCYFAFPRIGLAVALRPGDFLLFNPQEPHSISSRCRKEDEIFCISSYLKTDVVGLNDNSNPVV
Ga0334977_0519174_1_219	3300033978	Freshwater	HDYQLNDRIVVYFAFPRIGIAVALRPGDFLLFDPQEPHSISSRCKAEDKIFCASSYLKTAIVGLNDNSNTVV
Ga0334989_0026684_1018_1248	3300033984	Freshwater	LFKNHDYANDDKILCYFAFPRIGAAVALQPGDFLLFKPHEPHSISSRCNREDDVFIISSYLKTAVVGLHDNSDPIV
Ga0334989_0033688_2203_2451	3300033984	Freshwater	MSIVQAHIDNHDYVMDDKVICYFAFPRIGVAVALCPGDFLLFNPHEPHSISSRCRREDDIFIISSYLKTAVVGLNDNSNPIV
Ga0334989_0048394_39_287	3300033984	Freshwater	MSIVQAHIDNHDYANDDKIICYFAFPRIGAAVALRPGDFLLFNPGEPHSVSSRCNREDDVYIISSYLKTAVVGLHDNSDPIV
Ga0334989_0054356_1964_2197	3300033984	Freshwater	AHIDNHNYANDDKIICYFAFPRIGAAVALRPGDFLLFNPREPHSVSSHCNREDDVYIISSYLKTAVVGLHDNSDPIV
Ga0334989_0075661_174_422	3300033984	Freshwater	MSIVQAHIDNHDYQLNDRIVCYFAFPRIGIAVALRPGDFLLFDPQEPHSISSRCKAEDEIFCASSYLKTAIVGLNDNSNTVV
Ga0334989_0085297_183_446	3300033984	Freshwater	MRDFKMSIVQTHIDNHDYQLNDRIVCYFAFPRIGIAVALRPGDFLLFDPQEPHSVSSRCKAEDEIFCASSYLKTAIVGLKDNSNTVV
Ga0334989_0114186_1106_1357	3300033984	Freshwater	MSIVQAHIDNHDYQLNDRIVCYFAFPRIGIAVALRPGDFLLFNPQEPHSISSRCKAEDEIFCASSYLKTAIVGLNDNSNTVVY
Ga0334989_0212098_743_991	3300033984	Freshwater	MSIVQAHIDNHDYQLNDRIVCYFAFPQIGIAVALRPGDFLLFDPQEPHSISSRCKAEDEIFCASSYLKTAIVGLNDNSNTVV
Ga0334989_0234103_1_222	3300033984	Freshwater	IVQAHIDNHDYVNDDKIICYFAFPRIGAAVALRPGDFLLFNPREPHSISSRCNREDDVYIISSYLKNMTTGTP
Ga0334989_0273609_327_575	3300033984	Freshwater	MSILQAHIDNHDYQLNDRIVCYFAFPRIGIAMALRPGDFLLFDPQEPHSISSRCKAEDEIFCASSYLKTAIVGLNDYSNTVV
Ga0334989_0274072_621_869	3300033984	Freshwater	MSIVQAHIDNHDYANDDKIICYFAFPRIGAAVARRPGDFLLFNPLEPHSISSRCNREDDVYIVSSYLKTAVVGLHDNSNPIV
Ga0334989_0564617_39_287	3300033984	Freshwater	MSIVQAHIDNHDYANDDKIICYFAFPRIGAAVALRPGDFLLFNPREPHSISSRCNREDDVYIMSSYLKTAVVGLHDNSNLIV
Ga0335003_0227809_58_273	3300033995	Freshwater	VYQVDDKILCYFAFPRIGLAVALRPGDFLLFNPQEPHSISSRCRKEDEIFCISSYLKMDVVGLNNNSNPVV
Ga0334985_0461203_463_711	3300034018	Freshwater	MSIVQAHIDNHDYQLNDRIVVYFAFPRIGIAVALRPGDFLLFDPQEPHSISSRCKAEDEIFCASSYLKTAIVGLNNNSNTVV
Ga0335004_0212125_276_524	3300034021	Freshwater	MSIVQAHIDNHDYQLNDRIVIYFAFPRIGIAVALRPGDFLLFDPQEPHSISSRCKAEDEIFCASSYLKTAIVGLNDNSNTVV
Ga0335005_0213259_902_1150	3300034022	Freshwater	MSIVQAHIDNHDYANDDKIICYFAFPRIGTAVALRPGDFLLFNPREPHSVSSRCNREDDVYIISSYLKTAVVGLHDNSDPIV
Ga0335005_0553288_233_481	3300034022	Freshwater	MSIVQAHIDNHDYQLNDKIVCYFAFPRIGIAVALRPGDFLLFDPHEPHSISSCCKAEDEIFCASSYLKTAIVGLNDNSNTVV
Ga0335001_0237558_786_1007	3300034064	Freshwater	DNHVYQVDNKILCYFAFPRIGVAVALRPGDFLLFNPQEPSISSQCRKEDEIFCISSYLKTDVVGLNDNSNPLV
Ga0335001_0380365_209_457	3300034064	Freshwater	MSVVQAHIDDHDYQVDDRIICYFAFPRIGRAVALQPGDFLLFNPQEPHAISSRCCAGDEVFCISSYLKTDVVGGNDNSNTVV
Ga0335001_0399246_434_682	3300034064	Freshwater	MSIVQAHIDRQVYRDNDAVICYFAFPRIGIAMALRPGDFLLFNPQEPHCISSRCQDGDEIFSMSSYLKTAIVGLNDNSNTTV
Ga0335001_0401166_2_244	3300034064	Freshwater	IVQAHIDNHDYANDDKIICYFAFPRIGAAVALRPGDFLLFNPGEPHSVSSRCNREDDVYIISSYLKTAVVGLHDNSDPIV
Ga0335019_0526871_75_323	3300034066	Freshwater	MSIVQAHINNHDYQVNDRIVCYFAFPRIGIAVALRPGDFLLFNPQEPHSISSRCKAEDEIFCASSYLKTAIVGLNDNSNTVV
Ga0335035_0615145_1_237	3300034105	Freshwater	MSIVQAHIDNHDYQLNDRIVVYFAFPRIGIAVALRPGDFLLFDPQEPHSISSRCKAEDKIFCASSYLKTAIVGLNDNSN
Ga0335035_0732042_3_209	3300034105	Freshwater	NDDKIICYFAFPRIGAAVALRPGDFLLFNPNEPHCISSRCHREHDLYIISSYLKTAVVGLHDNSNLIV
Ga0335017_0026536_20_268	3300034167	Freshwater	MSIVQAHIDNHDYANDDKIVCYFAFPRIGAAVALRPGDFLLFNPLEPHSISSRCNREDDVYIVSSYLKTAVVGLHDNSNPIV
Ga0335017_0040942_2_220	3300034167	Freshwater	HDYANDDKIICYFAFPRIGAAVALRPGDFLLFNPREPHSISSRCNREDDVYIISSYLKTAVVRLHDNSKPIV
Ga0335017_0052254_1158_1406	3300034167	Freshwater	MSIVQAHIDNHNYANDDKIICYFAFPRIGAAVALRPGDFLLFNPREPHSVSSHCNREDDVYIISSYLKTAVVGLHDNSNPIV
Ga0335061_0225405_2_295	3300034168	Freshwater	IVQAHIDNHDYANDDKIICYFAFPRIGAAVALRPGDFLLFNPREPHSVSSRCNREDDVYIISSYLKTAVVGLHDNSDPIVWVNRELYAYSYWILSIL
Ga0335061_0240708_735_953	3300034168	Freshwater	HDYVNDDKIICYFAFPRIGAAVALRPGDFLLFNPHEPHSISSRCNREDDVYIISSYLKTAVVRLHDNSDPIV
Ga0335061_0430446_36_284	3300034168	Freshwater	MSIVQAHIDRQVYRDNNAVICYFAFPRIGIAVALRPGDFLLFNPQEPHCISSQCQDGNEFFSMSSYLKTAIVGLNDNSNTTV
Ga0335061_0442663_456_665	3300034168	Freshwater	ANDDKIVCYFAFPRIGVAVALRPGDFLLFNPLEPHSISFRCNREDDVYIISSYLKTAVVGLHDNSNPIV
Ga0334997_0037732_62_322	3300034280	Freshwater	MDFTMSIVQAHIDGIDYTDNDAVICYFAFPRIGIAVALRPGDYLLFNPQEPHCISSRCKNDDEIYSMSSYLKTAVVGLNDNSNSIV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F043783

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences