Metagenome / Metatranscriptome Family F043916

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F043916
Family Type	Metagenome / Metatranscriptome
Number of Sequences	155
Average Sequence Length	55 residues
Representative Sequence	PCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRILPGQSLSRLNPRN
Number of Associated Samples	99
Number of Associated Scaffolds	155

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.38 %
% of genes near scaffold ends (potentially truncated)	79.35 %
% of genes from short scaffolds (< 2000 bps)	59.35 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.032 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.710 % of family members)
Environment Ontology (ENVO)	Unclassified (61.290 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.903 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 30.19% Coil/Unstructured: 69.81%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 155 Family Scaffolds
PF00211	Guanylate_cyc	16.77
PF06147	DUF968	5.16
PF02195	ParBc	4.52
PF05226	CHASE2	2.58
PF00664	ABC_membrane	0.65
PF01061	ABC2_membrane	0.65
PF13505	OMP_b-brl	0.65
PF01638	HxlR	0.65
PF01381	HTH_3	0.65
PF04404	ERF	0.65
PF09588	YqaJ	0.65

COG ID	Name	Functional Category	% Frequency in 155 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	16.77
COG4252	Extracytoplasmic sensor domain CHASE2 (specificity unknown)	Signal transduction mechanisms [T]	2.58
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.03 %
Unclassified	root	N/A	30.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.03 %
Unclassified	root	N/A	30.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.03 %
Unclassified	root	N/A	30.97 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	66.45 %
Unclassified	root	N/A	30.97 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	65.16 %
Unclassified	root	N/A	30.97 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	30.97 %
Unclassified	root	N/A	30.97 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	22.58 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	30.32 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	12.90 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.94 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.65 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	30.32 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	11.61 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.94 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.65 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	30.32 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.94 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.94 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.65 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.65 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	30.32 %
Bradyrhizobium sp. 139	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	1.94 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.94 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.65 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.65 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10037400	Not Available	1120	Open in IMG/M
3300002245\|JGIcombinedJ26739_100406635	Not Available	1240	Open in IMG/M
3300004267\|Ga0066396_10010414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	1103	Open in IMG/M
3300005332\|Ga0066388_104048694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	747	Open in IMG/M
3300005363\|Ga0008090_10078409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1192	Open in IMG/M
3300005468\|Ga0070707_100120255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2550	Open in IMG/M
3300005713\|Ga0066905_100324540	All Organisms → cellular organisms → Bacteria → Proteobacteria	1219	Open in IMG/M
3300005713\|Ga0066905_100607994	Not Available	926	Open in IMG/M
3300005713\|Ga0066905_100653957	Not Available	896	Open in IMG/M
3300005713\|Ga0066905_102107440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300005764\|Ga0066903_102426956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	1014	Open in IMG/M
3300005764\|Ga0066903_103876169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	803	Open in IMG/M
3300005764\|Ga0066903_103950142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	795	Open in IMG/M
3300005764\|Ga0066903_104245656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	766	Open in IMG/M
3300006028\|Ga0070717_10426317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1193	Open in IMG/M
3300006606\|Ga0074062_11619335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560	Open in IMG/M
3300006853\|Ga0075420_101195200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	653	Open in IMG/M
3300009089\|Ga0099828_11702937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	554	Open in IMG/M
3300009792\|Ga0126374_11609904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300010043\|Ga0126380_11294538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	634	Open in IMG/M
3300010047\|Ga0126382_11239779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	670	Open in IMG/M
3300010359\|Ga0126376_11752803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	657	Open in IMG/M
3300010359\|Ga0126376_12619950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	553	Open in IMG/M
3300010360\|Ga0126372_10201414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1658	Open in IMG/M
3300010366\|Ga0126379_12838539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300010366\|Ga0126379_13784442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300010376\|Ga0126381_104755998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300010398\|Ga0126383_10442443	Not Available	1347	Open in IMG/M
3300010398\|Ga0126383_11068906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	896	Open in IMG/M
3300010398\|Ga0126383_12253971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631	Open in IMG/M
3300010868\|Ga0124844_1121147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	998	Open in IMG/M
3300012096\|Ga0137389_11030178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	705	Open in IMG/M
3300012208\|Ga0137376_10232456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1598	Open in IMG/M
3300012351\|Ga0137386_10723439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	715	Open in IMG/M
3300012363\|Ga0137390_10073495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3352	Open in IMG/M
3300012532\|Ga0137373_11086397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300015373\|Ga0132257_101212187	Not Available	956	Open in IMG/M
3300016270\|Ga0182036_10052801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2562	Open in IMG/M
3300016294\|Ga0182041_10473109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1081	Open in IMG/M
3300016294\|Ga0182041_10795626	Not Available	844	Open in IMG/M
3300016319\|Ga0182033_10313434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1299	Open in IMG/M
3300016319\|Ga0182033_11049682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	726	Open in IMG/M
3300016357\|Ga0182032_10500243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	999	Open in IMG/M
3300016371\|Ga0182034_10089151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2175	Open in IMG/M
3300016371\|Ga0182034_10323218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1244	Open in IMG/M
3300016404\|Ga0182037_10750354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	838	Open in IMG/M
3300016404\|Ga0182037_10799150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	813	Open in IMG/M
3300016445\|Ga0182038_10206227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1551	Open in IMG/M
3300017657\|Ga0134074_1372925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300021168\|Ga0210406_10245469	Not Available	1471	Open in IMG/M
3300021432\|Ga0210384_10224386	All Organisms → cellular organisms → Bacteria	1691	Open in IMG/M
3300021560\|Ga0126371_10580421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1270	Open in IMG/M
3300021560\|Ga0126371_10826982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1072	Open in IMG/M
3300021560\|Ga0126371_13718549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300026326\|Ga0209801_1162382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	934	Open in IMG/M
3300027862\|Ga0209701_10703521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	520	Open in IMG/M
3300031543\|Ga0318516_10073071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1904	Open in IMG/M
3300031543\|Ga0318516_10696950	Not Available	577	Open in IMG/M
3300031545\|Ga0318541_10009045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4403	Open in IMG/M
3300031545\|Ga0318541_10286539	Not Available	917	Open in IMG/M
3300031561\|Ga0318528_10036538	All Organisms → cellular organisms → Bacteria	2439	Open in IMG/M
3300031561\|Ga0318528_10055886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2005	Open in IMG/M
3300031572\|Ga0318515_10447016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	691	Open in IMG/M
3300031573\|Ga0310915_10008325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5926	Open in IMG/M
3300031573\|Ga0310915_10016169	All Organisms → cellular organisms → Bacteria	4448	Open in IMG/M
3300031573\|Ga0310915_10464397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	899	Open in IMG/M
3300031573\|Ga0310915_11135160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300031640\|Ga0318555_10025243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2843	Open in IMG/M
3300031668\|Ga0318542_10003653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	5111	Open in IMG/M
3300031668\|Ga0318542_10003765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5057	Open in IMG/M
3300031680\|Ga0318574_10060209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2023	Open in IMG/M
3300031680\|Ga0318574_10099343	Not Available	1612	Open in IMG/M
3300031713\|Ga0318496_10095101	Not Available	1594	Open in IMG/M
3300031719\|Ga0306917_10046007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2909	Open in IMG/M
3300031723\|Ga0318493_10626109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300031736\|Ga0318501_10295644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	863	Open in IMG/M
3300031744\|Ga0306918_10086142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2199	Open in IMG/M
3300031744\|Ga0306918_10740993	Not Available	768	Open in IMG/M
3300031744\|Ga0306918_11176386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	592	Open in IMG/M
3300031744\|Ga0306918_11222687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	579	Open in IMG/M
3300031747\|Ga0318502_10002028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7773	Open in IMG/M
3300031747\|Ga0318502_10354988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	868	Open in IMG/M
3300031763\|Ga0318537_10046962	Not Available	1561	Open in IMG/M
3300031765\|Ga0318554_10195522	Not Available	1151	Open in IMG/M
3300031765\|Ga0318554_10271198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	966	Open in IMG/M
3300031768\|Ga0318509_10053097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2072	Open in IMG/M
3300031771\|Ga0318546_11023117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300031779\|Ga0318566_10354461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	724	Open in IMG/M
3300031794\|Ga0318503_10007006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2827	Open in IMG/M
3300031798\|Ga0318523_10079331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	1587	Open in IMG/M
3300031821\|Ga0318567_10687012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300031833\|Ga0310917_10172264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1438	Open in IMG/M
3300031835\|Ga0318517_10024480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2366	Open in IMG/M
3300031879\|Ga0306919_10038239	All Organisms → cellular organisms → Bacteria → Proteobacteria	3091	Open in IMG/M
3300031879\|Ga0306919_10059760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2559	Open in IMG/M
3300031879\|Ga0306919_10871856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	690	Open in IMG/M
3300031893\|Ga0318536_10199897	Not Available	1018	Open in IMG/M
3300031897\|Ga0318520_10027811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2790	Open in IMG/M
3300031910\|Ga0306923_10105109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3189	Open in IMG/M
3300031910\|Ga0306923_10605384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1229	Open in IMG/M
3300031910\|Ga0306923_12261890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300031912\|Ga0306921_10040322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5268	Open in IMG/M
3300031912\|Ga0306921_10079928	All Organisms → cellular organisms → Bacteria	3764	Open in IMG/M
3300031912\|Ga0306921_12680471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300031941\|Ga0310912_10083146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2328	Open in IMG/M
3300031941\|Ga0310912_10308009	Not Available	1227	Open in IMG/M
3300031945\|Ga0310913_10003361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8783	Open in IMG/M
3300031946\|Ga0310910_10076835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2423	Open in IMG/M
3300031947\|Ga0310909_10015722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5327	Open in IMG/M
3300031954\|Ga0306926_10011560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9798	Open in IMG/M
3300031954\|Ga0306926_10209269	Not Available	2420	Open in IMG/M
3300031981\|Ga0318531_10135225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1099	Open in IMG/M
3300032001\|Ga0306922_10043067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4647	Open in IMG/M
3300032001\|Ga0306922_11530187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	666	Open in IMG/M
3300032001\|Ga0306922_11705609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	623	Open in IMG/M
3300032025\|Ga0318507_10132882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1056	Open in IMG/M
3300032044\|Ga0318558_10063332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1666	Open in IMG/M
3300032052\|Ga0318506_10015991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2647	Open in IMG/M
3300032065\|Ga0318513_10256407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	847	Open in IMG/M
3300032066\|Ga0318514_10135085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	1272	Open in IMG/M
3300032067\|Ga0318524_10526708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	621	Open in IMG/M
3300032068\|Ga0318553_10316120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	817	Open in IMG/M
3300032091\|Ga0318577_10521757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	566	Open in IMG/M
3300032094\|Ga0318540_10265292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	829	Open in IMG/M
3300033289\|Ga0310914_10044820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3619	Open in IMG/M
3300033289\|Ga0310914_10192294	Not Available	1819	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.71%
Host-Associated	Host-Associated	1.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.71%
Plants	Host-Associated → Plants	1.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.45%
Loam	Environmental → Terrestrial → Soil → Loam	12.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	63.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.29%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.03%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.65%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_100374001	3300000793	Forest Soil	IIEIIHARFPCRSPELHFFGYRFRAGSQGELSEGDICWNFLTRQWSWRILPGQSLSRLNPRN*
JGIcombinedJ26739_1004066352	3300002245	Forest Soil	ARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWTWRILPGQSLSRLNPRD*
Ga0066396_100104141	3300004267	Tropical Forest Soil	LKRDLPLDSVDIIHARFPCRAPGLYFFGYRFRIASKGEFSDGDICWNFSTGQWSWRILPGQPLSRLNPRE*
Ga0066388_1040486941	3300005332	Tropical Forest Soil	HADTIDIIHARFPCRSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRILPGQSLSRLNSRD*
Ga0008090_100784091	3300005363	Tropical Rainforest Soil	LHFFGYRFRVIEKGEYGDGDICWNMSTHQWSWRILPGQTLSRLNPRN*
Ga0070706_1006224652	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	FFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD*
Ga0070707_1001202555	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	DIHADTIDIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNISTRQWTWRILPGQSLSRLNPRN*
Ga0070698_1004113123	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	FGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD*
Ga0066905_1003245403	3300005713	Tropical Forest Soil	IIHARFPCHSPDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPRN*
Ga0066905_1006079942	3300005713	Tropical Forest Soil	FPCRSPDLHFFGYRFRVIEKGEYGDGDICWNISTRQWSWHILPGQSLSRLNPRN*
Ga0066905_1006539571	3300005713	Tropical Forest Soil	DTIDIIHARFPCHSPDLHFFGYRFRVILKGEFGDGDICWNVSTRQWSWRILPGQSLSRLNPRN*
Ga0066905_1021074402	3300005713	Tropical Forest Soil	LGEPDLHFFGYRFRIILKGEYGDGDICWNMSRHQWTWRILPWERLSRLNPRN*
Ga0066903_1004450624	3300005764	Tropical Forest Soil	VIEKGEYGDGDICWNMSTHQWSWRILPGQSLSRLNPRN*
Ga0066903_1024269563	3300005764	Tropical Forest Soil	IIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRFLPGQTLSRLNPRN*
Ga0066903_1038761692	3300005764	Tropical Forest Soil	KARLQGDIQADTIDIIHARFPCRSPDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPRN*
Ga0066903_1039501421	3300005764	Tropical Forest Soil	FPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTHQWSWRVLPGQSLSRLNPRN*
Ga0066903_1042456561	3300005764	Tropical Forest Soil	ARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTHQWSWRILPGQSLSRLNPRD*
Ga0066903_1078244381	3300005764	Tropical Forest Soil	YRFRVIEKGEYGDGDICWNMSTHQWSWRILPGQSLSRLNPHN*
Ga0066903_1078749181	3300005764	Tropical Forest Soil	PDLHFFGYRFRVILKGEFGDGDICWNMSTREWSWRILPGQSLSRLNPRN*
Ga0070717_104263174	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	HFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD*
Ga0074062_116193351	3300006606	Soil	EARARLQGDIHADTIDIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRILPGQSLSRLNPRD*
Ga0075420_1011952001	3300006853	Populus Rhizosphere	LPLDTIDIIHARFPCRSPDLHFFGYRFRISIKGEFSEGEICWNFSTGEWSWRILPGQPLSRLNPRD*
Ga0099828_117029372	3300009089	Vadose Zone Soil	IHARFPCRSPNLHFFGYRFRIGLKGEFSDGDICWNFATRQWSWRILPEQSLSRLNPRN*
Ga0126374_116099041	3300009792	Tropical Forest Soil	SPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRILPGQSLSRLNSRD*
Ga0126380_112945383	3300010043	Tropical Forest Soil	RSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRILPGQSLSRLNPSN*
Ga0126384_105926751	3300010046	Tropical Forest Soil	FRVIEKGEYGDGDICWNMSTHQWSWRILPGQTLSRLNPRN*
Ga0126382_112397792	3300010047	Tropical Forest Soil	CHSPDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPRN*
Ga0126373_106703202	3300010048	Tropical Forest Soil	KGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD*
Ga0126376_117528031	3300010359	Tropical Forest Soil	HFFGYRFRVIEKGEYGDGDICWNMSTHQWSWRILPGQTLSRLNPRN*
Ga0126376_126199502	3300010359	Tropical Forest Soil	PDLHFFGYRFRGILKGEYGDGDICWNMSRHRWTWRILPGQSLSRLNPPN*
Ga0126372_102014141	3300010360	Tropical Forest Soil	EARARLQDDIHADTIDIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTHQWSWRILPGQSLSRLNPRN*
Ga0126378_130100581	3300010361	Tropical Forest Soil	DLHFFGYRFRVILKGEFGDGDICWNVSTRQWSWRILPGQSLSRLNPRN*
Ga0126379_106669641	3300010366	Tropical Forest Soil	FRVIEKGEYGDGDICWNMSTRQWTWRIQPGQSLSRLNPRD*
Ga0126379_118149551	3300010366	Tropical Forest Soil	QKGEYGDGDICWNMSTHQWSWRFLPGQTLSRLNPHN*
Ga0126379_128385392	3300010366	Tropical Forest Soil	DLHFFGYRFRVIEKGEYGDGDICWNMSTHQWSWRILPGQTLSRLNPRN*
Ga0126379_137844421	3300010366	Tropical Forest Soil	ADTIDIIHARFPCRSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRILPGQSLSRLNPRN*
Ga0126381_1024583182	3300010376	Tropical Forest Soil	LHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPRN*
Ga0126381_1047559982	3300010376	Tropical Forest Soil	ARLQDDIHADTIDIIHARFPCHSPDLHFFGYRFRVIENGEYGDGDICWNMSTHQWSWRILPGQSLSRLNPRN*
Ga0126383_104424431	3300010398	Tropical Forest Soil	PDLHFFGYRFRVIEKGEYGDGDICWNISTRQWSWHILPGQSLSRLNPRN*
Ga0126383_110689061	3300010398	Tropical Forest Soil	IDIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNISTRQWTWRILPGQSLSRLNSRN*
Ga0126383_114485814	3300010398	Tropical Forest Soil	IEKGEYGDGDICWNMSTHQWSWRILPGQTLSRLNPHN*
Ga0126383_122539712	3300010398	Tropical Forest Soil	PDLHFFGYRFRVIEKGEYGDGDICWNISTRQWSWRILPGQSLSRLNSRN*
Ga0124844_11211472	3300010868	Tropical Forest Soil	DIHADTIDIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTHQWSWRILPGQSLSRLNPRN*
Ga0137391_106395132	3300011270	Vadose Zone Soil	FFGYRFRVIEKGEYGDGDICWNISTHQWTWRILPGQSLSRLNPRD*
Ga0137389_110301782	3300012096	Vadose Zone Soil	RARLQGDIHADTIDIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNISTHQWTWRILPGQCLSRLNPRD*
Ga0137376_102324561	3300012208	Vadose Zone Soil	DTIDIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRFLPGQSLSRLNSRD*
Ga0137377_114949941	3300012211	Vadose Zone Soil	GEYGDGDICWNMSTRQWTWRILPGQSLSRLNPRN*
Ga0137386_107234392	3300012351	Vadose Zone Soil	DIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRFLPGQSLSRLNSRD
Ga0137390_100734951	3300012363	Vadose Zone Soil	IDIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWTWRFLPGQSLSRLNPR
Ga0137373_110863971	3300012532	Vadose Zone Soil	IDIIHARFPCRSPDLHFFGYRFRIAIKGEFSEGEICWNFSSGQWSWRILPGQPLSRLNPRD*
Ga0132257_1012121874	3300015373	Arabidopsis Rhizosphere	RSPDLHIFGYRFRISVKEEYALGDICWDFAAKEWSWQILPEYSLSRLNTPK*
Ga0182036_100528014	3300016270	Soil	QDDIHADTIDIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRN
Ga0182041_101451934	3300016294	Soil	LHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQTLSRLNPRN
Ga0182041_104731091	3300016294	Soil	HARFPCHSPDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPRN
Ga0182041_107956262	3300016294	Soil	PGLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD
Ga0182033_103134341	3300016319	Soil	RLQDDIPADTIDIIHARFPCHSPDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPRN
Ga0182033_110496821	3300016319	Soil	PADTIDIIHARFPCHSPDLHFFGYRFPAALKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPHN
Ga0182035_117790592	3300016341	Soil	FGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD
Ga0182032_105002431	3300016357	Soil	HARFPCHSPGLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRN
Ga0182034_100891514	3300016371	Soil	FPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRFLPGQSLSRLNPRN
Ga0182034_103232183	3300016371	Soil	FGYRFRVIEKGEYGDGDICWNISTHQWTWRILPGQSLSRLNPRN
Ga0182040_112580922	3300016387	Soil	RVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD
Ga0182037_107503541	3300016404	Soil	DIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMLTHQWSWRILPGQSLSRLNPRN
Ga0182037_107991502	3300016404	Soil	IHADTIDIIHARFPCHSPDLHFFGYRFRVIQKGEYGDGDICWNMSTRQWSWRFLPGQTLSRLNPRN
Ga0182038_102062271	3300016445	Soil	IIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRN
Ga0134074_13729251	3300017657	Grasslands Soil	RARLQGDIHADTNDLIHARFPCHSPDLHFFGYRVRVIVKGEYGAGDICWNMSTRQWSWRFLPGQSLSRLNSRD
Ga0210406_102454691	3300021168	Soil	FPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRILPGQSLSRLKPRD
Ga0210384_102243861	3300021432	Soil	LQGDIHADTIDIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWTWRILPGQSLSRLNPRD
Ga0126371_105804213	3300021560	Tropical Forest Soil	EARARLQDDIHADTIDIIHARFPCHSPDLHFFGYRFRVIENGEYGDGDICWNMSTHQWSWRILPGQSLSRLNPRN
Ga0126371_108269823	3300021560	Tropical Forest Soil	DIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRFLPGQTLSRLNPRN
Ga0126371_137185491	3300021560	Tropical Forest Soil	DLHFFGYRFRVILKGEFGDGDICWNVSTRQWSWRILPGQSLSRLNRRN
Ga0209801_11623821	3300026326	Soil	GDIHANTIDIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRFLPGQSLSRLNSRD
Ga0209648_107263961	3300026551	Grasslands Soil	LGYQFRISVKGEFSDGDICWSFSTRQWSWRILPGQSLSRLNPRE
Ga0209701_107035212	3300027862	Vadose Zone Soil	ARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD
Ga0318516_100730711	3300031543	Soil	VIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRN
Ga0318516_106969501	3300031543	Soil	DIHADTIDIIHARFPCHSPGLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD
Ga0318541_100090458	3300031545	Soil	CHSPDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPRN
Ga0318541_102865391	3300031545	Soil	IDIIHARFPCHSPGLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPR
Ga0318528_100365384	3300031561	Soil	DIPADTIDIIHARFPCHSPDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPRN
Ga0318528_100558861	3300031561	Soil	DDIPADTIDIIHARFPCHSPDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPRN
Ga0318515_104470161	3300031572	Soil	SPDLHFFGYRFRVILKGEFGDGDICWNISTRQWSWRILPGQSLSRLNPRN
Ga0310915_100083257	3300031573	Soil	ARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRN
Ga0310915_100161696	3300031573	Soil	HSPDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPRN
Ga0310915_104643971	3300031573	Soil	CHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWTWRILPGQSLSRLNPRN
Ga0310915_111351602	3300031573	Soil	LQDDIHADTIDIIHARFPCHSPDLHFFGYRFRVIQKGGYGDGDICWNMSTRQWSWRF
Ga0318555_100252431	3300031640	Soil	PCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRN
Ga0318555_102943791	3300031640	Soil	IEKGEYGDGDICWNMSTRQWSWRFLPGQTLSRLNPRN
Ga0318542_100036538	3300031668	Soil	DIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRN
Ga0318542_100037657	3300031668	Soil	HARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRFLPGQTLSRLNPRN
Ga0318574_100507285	3300031680	Soil	VIEKGEYGDGDICWNMSTRQWSWRFLPGQTLSRLNPRN
Ga0318574_100602091	3300031680	Soil	RARLQDDIPADTIDIIHARFPCHSPDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPRN
Ga0318574_100993431	3300031680	Soil	RLQDDIHADTIDIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD
Ga0318496_100951012	3300031713	Soil	RLQDDIHADTIDIIHARFPCHSPGLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD
Ga0306917_100460071	3300031719	Soil	FPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRN
Ga0318493_106261092	3300031723	Soil	DLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRN
Ga0318501_102956442	3300031736	Soil	PCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRFLPGQTLSRLNPRN
Ga0306918_100861421	3300031744	Soil	IDIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRFLPGQTLSRLNPR
Ga0306918_107409932	3300031744	Soil	HSPGLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD
Ga0306918_111763861	3300031744	Soil	IHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRN
Ga0306918_112226871	3300031744	Soil	CHSPDLHFFGYRFRVIEKGEYGDGDICWNISTHQWTWRILPGQSLSRLNPRD
Ga0306918_112936011	3300031744	Soil	YRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQTLSRLNPRN
Ga0318502_100020281	3300031747	Soil	IDIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPR
Ga0318502_103549882	3300031747	Soil	IDIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNISTHQWTWRILPGQSLSRLNPR
Ga0318494_103884661	3300031751	Soil	GYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD
Ga0318537_100469622	3300031763	Soil	SPDLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD
Ga0318554_101955221	3300031765	Soil	DDIHADTIDIIHARFPCHSPGLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD
Ga0318554_102711982	3300031765	Soil	TIDIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRN
Ga0318509_100530974	3300031768	Soil	FPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRFLPGQTLSRLNPRN
Ga0318546_100431891	3300031771	Soil	FRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD
Ga0318546_110231172	3300031771	Soil	IDIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQTLSRLNPR
Ga0318566_103544611	3300031779	Soil	ARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRFLPGQTLSRLNPRN
Ga0318503_100070061	3300031794	Soil	CHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRN
Ga0318523_100793311	3300031798	Soil	CHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRFLPGQTLSRLNPRN
Ga0318567_106870122	3300031821	Soil	PCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRILPGQSLSRLNPRN
Ga0310917_101722643	3300031833	Soil	RARLQGDIHADTINIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRFLPGQSLSRLNPRN
Ga0318517_100244801	3300031835	Soil	ADTIDIIHARFPCHPPDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPHN
Ga0306919_100382395	3300031879	Soil	PADTIDIIHARFPCHSPDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPRN
Ga0306919_100597606	3300031879	Soil	LQDDIHADTIDIIHARFPCHSPDLHFFGYRFRVIQKGGYGDGDICWNMSTRQWSWRFLPGQTLSRLNPRN
Ga0306919_105722692	3300031879	Soil	EKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD
Ga0306919_108718561	3300031879	Soil	PDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWTWRILPGQSLSRLNPRN
Ga0318536_101998971	3300031893	Soil	CHSPGLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD
Ga0318520_100278111	3300031897	Soil	TIDIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRFLPGQTLSRLNPRN
Ga0306923_101051095	3300031910	Soil	IIHARFPCHSPDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPRN
Ga0306923_106053844	3300031910	Soil	HARFPCYSPDLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRN
Ga0306923_122618902	3300031910	Soil	PDLHFFGYRFRVIQKGEYGDGDICWNMSTRQWSWRILPGQSLSRLNPRN
Ga0306921_100403221	3300031912	Soil	ARLQDDIPADTIDIIHARFPCHSPDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPRN
Ga0306921_100799285	3300031912	Soil	IPADTIDIIHARFPCHSPDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPRN
Ga0306921_106177071	3300031912	Soil	FFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQTLSRLNPRN
Ga0306921_126804712	3300031912	Soil	ARARLQDDIHADTTDIIHARFPCHSPDLHFFGYRFRVIGKGEYGDGDICWNMSTRQWSWRILPGQSLSRLNPRD
Ga0310912_100831461	3300031941	Soil	HYFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRN
Ga0310912_103080091	3300031941	Soil	GLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD
Ga0310913_1000336110	3300031945	Soil	ARFPCHSPDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPRN
Ga0310910_100768355	3300031946	Soil	RFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRFLPGQTLSRLNPRN
Ga0310909_1001572211	3300031947	Soil	IHARFPCHSPDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPRN
Ga0306926_1001156011	3300031954	Soil	DTIDIIHARFPCHSPDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPRN
Ga0306926_102092691	3300031954	Soil	RFPCHSPGLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD
Ga0318530_100478591	3300031959	Soil	PDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPHN
Ga0318531_101352251	3300031981	Soil	EKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRN
Ga0306922_100197261	3300032001	Soil	RFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD
Ga0306922_100430676	3300032001	Soil	DIIHARFPCHSPDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPRN
Ga0306922_115301872	3300032001	Soil	RLKSDLPVDIIEIIHARFPCRSPELHFFGYRFRAGSKDELSEGDICWNFSTRQWSWRFLPGQSLSRLNPHD
Ga0306922_117056091	3300032001	Soil	PDLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQTLSRLNPRN
Ga0318507_101328823	3300032025	Soil	HLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRN
Ga0318558_100633323	3300032044	Soil	PCHSPDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPHK
Ga0318506_100159911	3300032052	Soil	IHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRFLPGQTLSRLNPRN
Ga0318533_102354263	3300032059	Soil	IEKGEYGDGDICWNMSTRQWTWRFLPGQSLSRLNPRD
Ga0318513_102564072	3300032065	Soil	DLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRFLPGQTLSRLNPRN
Ga0318514_101350852	3300032066	Soil	ARLQDDIHADTIDIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTRQWSWRFLPGQTLSRLNPRN
Ga0318514_103125852	3300032066	Soil	KGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD
Ga0318524_105267082	3300032067	Soil	RFPCHSPDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPHN
Ga0318553_103161202	3300032068	Soil	PCHSPDLHFFGYRFRVIQKGEYGDGDICWNMSTRQWSWRILPGQSLSRLNPRN
Ga0318577_105217572	3300032091	Soil	IHADTIDIIHARFPCHSPDLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQTLSRLNPRN
Ga0318540_102652922	3300032094	Soil	NDFVSIRFFQARFPYHSPDLHFFGYRFRVILKGEFGDGDICWNISTRQWSWRILPGQSLSRLNPRN
Ga0310914_100448206	3300033289	Soil	IDIIHARFPCHSPDLHFFGYRFRVILKGEFGDGDICWNMSTRQWSWRILPGQSLSRLNPR
Ga0310914_101922944	3300033289	Soil	FPCHSPGLHFFGYRFRVIEKGEYGDGDICWNMSTHQWTWRILPGQSLSRLNPRD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F043916

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences