Metagenome Family F043956

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F043956
Family Type	Metagenome
Number of Sequences	155
Average Sequence Length	63 residues
Representative Sequence	VPQPITERIKKLRQEIAELTEKNRKYSLGPKYGSAVADNERRFQRLIEIVEELKSLTDWKKP
Number of Associated Samples	102
Number of Associated Scaffolds	155

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	40.26 %
% of genes near scaffold ends (potentially truncated)	21.29 %
% of genes from short scaffolds (< 2000 bps)	84.52 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (52.903 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (54.839 % of family members)
Environment Ontology (ENVO)	Unclassified (68.387 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (69.677 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.67% β-sheet: 0.00% Coil/Unstructured: 43.33%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 155 Family Scaffolds
PF00196	GerE	5.16
PF11154	DUF2934	2.58
PF00072	Response_reg	1.94
PF07676	PD40	1.94
PF03544	TonB_C	1.29
PF01551	Peptidase_M23	1.29
PF00950	ABC-3	1.29
PF08238	Sel1	0.65
PF00534	Glycos_transf_1	0.65
PF01475	FUR	0.65
PF01569	PAP2	0.65
PF00571	CBS	0.65
PF05598	DUF772	0.65
PF03702	AnmK	0.65
PF02201	SWIB	0.65
PF13620	CarboxypepD_reg	0.65
PF00665	rve	0.65
PF01609	DDE_Tnp_1	0.65
PF02586	SRAP	0.65
PF01740	STAS	0.65
PF01566	Nramp	0.65
PF13401	AAA_22	0.65
PF10711	DUF2513	0.65
PF13883	Pyrid_oxidase_2	0.65
PF02776	TPP_enzyme_N	0.65
PF13751	DDE_Tnp_1_6	0.65
PF13424	TPR_12	0.65
PF14280	DUF4365	0.65
PF12760	Zn_Tnp_IS1595	0.65
PF00069	Pkinase	0.65
PF00590	TP_methylase	0.65
PF02746	MR_MLE_N	0.65

COG ID	Name	Functional Category	% Frequency in 155 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.58
COG0609	ABC-type Fe3+-siderophore transport system, permease component	Inorganic ion transport and metabolism [P]	1.29
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	1.29
COG1108	ABC-type Mn2+/Zn2+ transport system, permease component	Inorganic ion transport and metabolism [P]	1.29
COG4606	ABC-type enterochelin transport system, permease component	Inorganic ion transport and metabolism [P]	1.29
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	1.29
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	0.65
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.65
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.65
COG2377	1,6-Anhydro-N-acetylmuramate kinase	Cell wall/membrane/envelope biogenesis [M]	0.65
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.65
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.65
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.65
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.65
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.65
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.65
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.65
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.65
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.65
COG5531	DNA-binding SWIB/MDM2 domain	Chromatin structure and dynamics [B]	0.65
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.90 %
All Organisms	root	All Organisms	47.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.90 %
cellular organisms	root	All Organisms → cellular organisms	47.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.90 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	25.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.29 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.65 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.90 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	15.48 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.87 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.65 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.65 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.48 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.23 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.65 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.65 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.65 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.48 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.23 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.65 %
Lactobacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales	0.65 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.48 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	1.94 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.65 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.65 %
Lactobacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae	0.65 %
Desulfovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae	0.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.48 %
Terriglobus roseus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus roseus	1.94 %
Desulfovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	0.65 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.65 %
Ligilactobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Ligilactobacillus	0.65 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.48 %
Terriglobus roseus DSM 18391	strain	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus roseus → Terriglobus roseus DSM 18391	1.94 %
Ligilactobacillus animalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Ligilactobacillus → Ligilactobacillus animalis	0.65 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio → environmental samples	0.65 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.65 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.48 %
Terriglobus roseus DSM 18391	strain	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus roseus → Terriglobus roseus DSM 18391	1.94 %
uncultured Desulfovibrio sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio → environmental samples → uncultured Desulfovibrio sp.	0.65 %
Ligilactobacillus animalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Ligilactobacillus → Ligilactobacillus animalis	0.65 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.65 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.65 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001160\|JGI12654J13325_1013225	Not Available	594	Open in IMG/M
3300001661\|JGI12053J15887_10358152	Not Available	705	Open in IMG/M
3300004463\|Ga0063356_100521619	All Organisms → cellular organisms → Bacteria → Acidobacteria	1579	Open in IMG/M
3300005171\|Ga0066677_10439278	All Organisms → cellular organisms → Bacteria → Acidobacteria	747	Open in IMG/M
3300005178\|Ga0066688_10164800	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300005338\|Ga0068868_100778531	Not Available	862	Open in IMG/M
3300005434\|Ga0070709_10547467	Not Available	885	Open in IMG/M
3300005434\|Ga0070709_10556968	Not Available	878	Open in IMG/M
3300005434\|Ga0070709_11194386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Ligilactobacillus → Ligilactobacillus animalis	611	Open in IMG/M
3300005437\|Ga0070710_10009976	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4657	Open in IMG/M
3300005440\|Ga0070705_101566574	Not Available	554	Open in IMG/M
3300005445\|Ga0070708_100147000	All Organisms → cellular organisms → Bacteria → Proteobacteria	2190	Open in IMG/M
3300005451\|Ga0066681_10181583	Not Available	1252	Open in IMG/M
3300005454\|Ga0066687_10482558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300005467\|Ga0070706_100145210	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2215	Open in IMG/M
3300005471\|Ga0070698_100811276	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus roseus → Terriglobus roseus DSM 18391	880	Open in IMG/M
3300005559\|Ga0066700_10869985	Not Available	601	Open in IMG/M
3300005598\|Ga0066706_10520367	All Organisms → cellular organisms → Bacteria → Acidobacteria	947	Open in IMG/M
3300005995\|Ga0066790_10167783	Not Available	939	Open in IMG/M
3300006358\|Ga0068871_101697050	Not Available	599	Open in IMG/M
3300006796\|Ga0066665_11681954	Not Available	502	Open in IMG/M
3300006797\|Ga0066659_10518923	All Organisms → cellular organisms → Bacteria → Acidobacteria	958	Open in IMG/M
3300006854\|Ga0075425_102117150	Not Available	628	Open in IMG/M
3300006904\|Ga0075424_102056363	Not Available	602	Open in IMG/M
3300007258\|Ga0099793_10327928	Not Available	746	Open in IMG/M
3300007788\|Ga0099795_10349723	Not Available	661	Open in IMG/M
3300009038\|Ga0099829_10097582	Not Available	2281	Open in IMG/M
3300009038\|Ga0099829_10305738	Not Available	1305	Open in IMG/M
3300009038\|Ga0099829_10318347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1277	Open in IMG/M
3300009038\|Ga0099829_11110972	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300009088\|Ga0099830_10084375	All Organisms → cellular organisms → Bacteria → Acidobacteria	2337	Open in IMG/M
3300009088\|Ga0099830_11770111	Not Available	516	Open in IMG/M
3300009090\|Ga0099827_10350204	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus roseus → Terriglobus roseus DSM 18391	1256	Open in IMG/M
3300009143\|Ga0099792_10042847	Not Available	2168	Open in IMG/M
3300009143\|Ga0099792_10867627	Not Available	595	Open in IMG/M
3300009174\|Ga0105241_11056364	Not Available	762	Open in IMG/M
3300009551\|Ga0105238_12547485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300009553\|Ga0105249_11788547	Not Available	687	Open in IMG/M
3300010375\|Ga0105239_12668898	Not Available	583	Open in IMG/M
3300011269\|Ga0137392_10025492	All Organisms → cellular organisms → Bacteria	4219	Open in IMG/M
3300011269\|Ga0137392_10732996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300011270\|Ga0137391_10042143	All Organisms → cellular organisms → Bacteria	3870	Open in IMG/M
3300011270\|Ga0137391_10568731	Not Available	953	Open in IMG/M
3300011270\|Ga0137391_11057584	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	659	Open in IMG/M
3300011271\|Ga0137393_10160695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1881	Open in IMG/M
3300012096\|Ga0137389_10031654	All Organisms → cellular organisms → Bacteria → Acidobacteria	3846	Open in IMG/M
3300012096\|Ga0137389_10216780	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M
3300012096\|Ga0137389_10228025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1559	Open in IMG/M
3300012096\|Ga0137389_10328003	Not Available	1299	Open in IMG/M
3300012096\|Ga0137389_10657698	Not Available	900	Open in IMG/M
3300012096\|Ga0137389_10712563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	862	Open in IMG/M
3300012096\|Ga0137389_11272043	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	629	Open in IMG/M
3300012189\|Ga0137388_10014230	All Organisms → cellular organisms → Bacteria	5763	Open in IMG/M
3300012189\|Ga0137388_10397951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1275	Open in IMG/M
3300012189\|Ga0137388_10829544	Not Available	856	Open in IMG/M
3300012202\|Ga0137363_10011649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5639	Open in IMG/M
3300012202\|Ga0137363_10738303	Not Available	834	Open in IMG/M
3300012202\|Ga0137363_10756816	Not Available	823	Open in IMG/M
3300012202\|Ga0137363_10997719	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300012203\|Ga0137399_11494727	Not Available	562	Open in IMG/M
3300012205\|Ga0137362_10328050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1325	Open in IMG/M
3300012210\|Ga0137378_10708462	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus roseus → Terriglobus roseus DSM 18391	918	Open in IMG/M
3300012211\|Ga0137377_11261462	Not Available	669	Open in IMG/M
3300012349\|Ga0137387_10922610	Not Available	630	Open in IMG/M
3300012361\|Ga0137360_10245573	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300012362\|Ga0137361_10093448	All Organisms → cellular organisms → Bacteria	2600	Open in IMG/M
3300012362\|Ga0137361_10979119	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300012362\|Ga0137361_11253066	Not Available	665	Open in IMG/M
3300012362\|Ga0137361_11509115	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300012362\|Ga0137361_11934417	Not Available	506	Open in IMG/M
3300012363\|Ga0137390_10433547	Not Available	1291	Open in IMG/M
3300012582\|Ga0137358_10123956	All Organisms → cellular organisms → Bacteria	1756	Open in IMG/M
3300012582\|Ga0137358_10367768	Not Available	973	Open in IMG/M
3300012582\|Ga0137358_10410775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	915	Open in IMG/M
3300012683\|Ga0137398_10117152	Not Available	1696	Open in IMG/M
3300012683\|Ga0137398_10152946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1498	Open in IMG/M
3300012683\|Ga0137398_10369507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	973	Open in IMG/M
3300012685\|Ga0137397_10403788	Not Available	1018	Open in IMG/M
3300012922\|Ga0137394_10590129	Not Available	940	Open in IMG/M
3300012922\|Ga0137394_11045225	Not Available	678	Open in IMG/M
3300012923\|Ga0137359_10166284	Not Available	1968	Open in IMG/M
3300012923\|Ga0137359_11106021	Not Available	678	Open in IMG/M
3300012923\|Ga0137359_11265725	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300012924\|Ga0137413_10607626	Not Available	819	Open in IMG/M
3300012925\|Ga0137419_10126522	All Organisms → cellular organisms → Bacteria	1812	Open in IMG/M
3300012927\|Ga0137416_11161935	Not Available	694	Open in IMG/M
3300012927\|Ga0137416_12046858	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300012929\|Ga0137404_10180811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1775	Open in IMG/M
3300012929\|Ga0137404_11407165	Not Available	644	Open in IMG/M
3300012929\|Ga0137404_11759203	Not Available	576	Open in IMG/M
3300012929\|Ga0137404_11907026	Not Available	553	Open in IMG/M
3300012930\|Ga0137407_10200362	Not Available	1790	Open in IMG/M
3300012930\|Ga0137407_10547743	All Organisms → cellular organisms → Bacteria → Acidobacteria	1083	Open in IMG/M
3300012930\|Ga0137407_11647164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300012957\|Ga0164303_10235170	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1039	Open in IMG/M
3300012958\|Ga0164299_10955063	Not Available	627	Open in IMG/M
3300012984\|Ga0164309_11789657	Not Available	527	Open in IMG/M
3300013296\|Ga0157374_10040104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4311	Open in IMG/M
3300013297\|Ga0157378_13060866	Not Available	519	Open in IMG/M
3300013306\|Ga0163162_10246940	Not Available	1916	Open in IMG/M
3300015193\|Ga0167668_1076133	Not Available	659	Open in IMG/M
3300015241\|Ga0137418_10176211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1866	Open in IMG/M
3300015242\|Ga0137412_10791927	Not Available	697	Open in IMG/M
3300015245\|Ga0137409_10070880	All Organisms → cellular organisms → Bacteria → Acidobacteria	3268	Open in IMG/M
3300015245\|Ga0137409_10136219	Not Available	2255	Open in IMG/M
3300015264\|Ga0137403_10334966	Not Available	1403	Open in IMG/M
3300015264\|Ga0137403_10776243	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300015264\|Ga0137403_11125263	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300017936\|Ga0187821_10021182	All Organisms → cellular organisms → Bacteria	2267	Open in IMG/M
3300019789\|Ga0137408_1322389	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300019877\|Ga0193722_1085948	Not Available	767	Open in IMG/M
3300019879\|Ga0193723_1148534	Not Available	630	Open in IMG/M
3300019887\|Ga0193729_1045400	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300020004\|Ga0193755_1123691	Not Available	805	Open in IMG/M
3300020004\|Ga0193755_1188616	Not Available	598	Open in IMG/M
3300020580\|Ga0210403_11220653	Not Available	578	Open in IMG/M
3300020583\|Ga0210401_10160128	Not Available	2102	Open in IMG/M
3300021080\|Ga0210382_10164791	Not Available	954	Open in IMG/M
3300021086\|Ga0179596_10323909	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300021344\|Ga0193719_10082582	Not Available	1397	Open in IMG/M
3300021559\|Ga0210409_10134281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2271	Open in IMG/M
3300024330\|Ga0137417_1499546	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300025900\|Ga0207710_10046624	All Organisms → cellular organisms → Bacteria	1935	Open in IMG/M
3300025927\|Ga0207687_10040685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3188	Open in IMG/M
3300025972\|Ga0207668_11965325	Not Available	527	Open in IMG/M
3300026294\|Ga0209839_10107872	Not Available	946	Open in IMG/M
3300026354\|Ga0257180_1049166	Not Available	597	Open in IMG/M
3300026552\|Ga0209577_10505596	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300027651\|Ga0209217_1006674	All Organisms → cellular organisms → Bacteria	3842	Open in IMG/M
3300027846\|Ga0209180_10119772	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300027846\|Ga0209180_10160032	Not Available	1298	Open in IMG/M
3300027862\|Ga0209701_10015217	All Organisms → cellular organisms → Bacteria	5043	Open in IMG/M
3300027862\|Ga0209701_10384107	Not Available	787	Open in IMG/M
3300027903\|Ga0209488_10109135	Not Available	2078	Open in IMG/M
3300027903\|Ga0209488_10212075	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300028047\|Ga0209526_10703978	Not Available	636	Open in IMG/M
3300028536\|Ga0137415_10032597	All Organisms → cellular organisms → Bacteria	5123	Open in IMG/M
3300028536\|Ga0137415_10795677	All Organisms → cellular organisms → Bacteria → Acidobacteria	756	Open in IMG/M
3300028536\|Ga0137415_10878092	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300028792\|Ga0307504_10464268	Not Available	510	Open in IMG/M
3300028828\|Ga0307312_10506339	Not Available	797	Open in IMG/M
3300031057\|Ga0170834_103840089	Not Available	536	Open in IMG/M
3300031716\|Ga0310813_10561532	Not Available	1005	Open in IMG/M
3300031720\|Ga0307469_10272867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1376	Open in IMG/M
3300031720\|Ga0307469_10325017	Not Available	1279	Open in IMG/M
3300031962\|Ga0307479_10390015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1377	Open in IMG/M
3300031962\|Ga0307479_10495188	Not Available	1206	Open in IMG/M
3300031962\|Ga0307479_10545827	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1142	Open in IMG/M
3300032180\|Ga0307471_101494382	Not Available	834	Open in IMG/M
3300032180\|Ga0307471_102490192	Not Available	655	Open in IMG/M
3300032205\|Ga0307472_100125298	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1825	Open in IMG/M
3300032205\|Ga0307472_102395784	Not Available	535	Open in IMG/M
3300032421\|Ga0310812_10406713	Not Available	612	Open in IMG/M
3300032421\|Ga0310812_10412466	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio → environmental samples → uncultured Desulfovibrio sp.	608	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.32%
Host-Associated	Host-Associated	9.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.03%
Plants	Host-Associated → Plants	9.68%
Aquatic	Environmental → Aquatic	1.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.10%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.94%
Freshwater	Environmental → Aquatic → Freshwater	1.29%
Roots	Host-Associated → Plants → Roots	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.35%
Loam	Environmental → Terrestrial → Soil → Loam	8.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.29%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.65%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	65.16%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.16%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.29%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.65%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.65%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	54.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.58%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.29%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.29%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.29%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.65%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.65%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.65%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001160	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12654J13325_10132252	3300001160	Forest Soil	MPQPVAERVKKLRDEIAEINQANRAYVHDPKYGSAVADHERRFQRLLEIVNELKSLTDWKKL*
JGI12053J15887_103581521	3300001661	Forest Soil	MPQPVAERIKKLRDEIAEINQTNRAYLRDPKYGSAVADNERRLQRLLEIAEEMKS
Ga0063356_1005216192	3300004463	Arabidopsis Thaliana Rhizosphere	MPRLITERIKELRREIAEMTEANRKYLRGPKYGSAPADYERRFQRLLEIVDELRSLTEWRKP*
Ga0066677_104392782	3300005171	Soil	RMPQPVAERIKKLRDEIAAINQANGVYLHGPKYGSYVADHERRMQRLLEIVDELKSLTDWKKL*
Ga0066688_101648001	3300005178	Soil	VQRPVAERIKALRQEIAEITEKNLQYSRGPKYGSSTAENERRFQRLIEILDELKSLTEWKAL*
Ga0068868_1007785311	3300005338	Miscanthus Rhizosphere	MPPPITERVKKLREEIAELTGKNRAYSCGPKYGSAVADNERRFQRLIEIADELKSLTDWKKP*
Ga0070709_105474672	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPQPVAERIKKLRDEIAAINQANRVYLHGPKYGSAVADHERRLQRLLEIVDELKSLTDWKKL*
Ga0070709_105569682	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAQLITERVKKLRDEIAKLNEANRAYLKGAKYGAATADNERRLQRLLEIADELKSLTDWRKP*
Ga0070709_111943861	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLITERIKALRQEITEITEKNRSYLRGPKYGSAIADNERRFQRLIEIVEELKGLTDWKKP*
Ga0070710_100099763	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MAQLITERVKKLRDEIAKLNEANRAYLKGPKHGAATADNERRLQRLLEIADELKSLTDWRKP*
Ga0070705_1015665741	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RPITERIKELRQEIAELTEKNRRYSLGPKYGSAAADNERRFQRLIEIVEELKSMTDWKEP
Ga0070708_1001470003	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LRDEIAAINQANRVNLHSPKYGSAVADHERRLKRLLEMVDELKSLTDWKKL*
Ga0066681_101815831	3300005451	Soil	VPPPITERVKKLRQEIAELTEKNRRYSLGPKYGSAVADNERRFQRLIEIAEELKSLTDWKKP*
Ga0066687_104825582	3300005454	Soil	VQRPVAERIKELRQEIAEITEKNLQYSRGPKYGSSTAENERRFQRLIEILDELKSLTEWKAL*
Ga0070706_1001452103	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAQLITERVKNLRNEIAKLSEANRAYLKGPKYGTATADNERRLQRLLEIADELKSLTDWKKP*
Ga0070698_1008112762	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPQPVTERIKKLRDEIAAINQANRVYLHSPKYGSAVADHARRLQRLLEIVDELKSLTDWKKI*
Ga0066700_108699852	3300005559	Soil	MPRLITERIQALRQEITEITEKNRSYLRGPKYGSANADNERRFQRLLEIVEELKGLTDWKKP*
Ga0066706_105203672	3300005598	Soil	MARLITERIQALRQEITEITEKNRSYLSGPKYGTAIADNERRFQRLIEIVEELKGLTDWKKP*
Ga0066790_101677831	3300005995	Soil	AERIKTLRHEIAKINEANLTYVNSPKIGSATADNERRFQRLLEIVDELKSLTDWKKI*
Ga0068871_1016970501	3300006358	Miscanthus Rhizosphere	VPPPITERVKKLRQEIAELTEKNRRYSVGPKYGSGVADNERRFQRLFEIAEELKSLTDWKKP*
Ga0066665_116819542	3300006796	Soil	MAQLITDRVKNLPNEIAKLSEANRAYLKGPKYGTATADHERRLQRLLEIADELKSLTDWKKP*
Ga0066659_105189232	3300006797	Soil	MPRLITERIKALRQEITEIMEKNRSYLRGPKYGSAIADNERRFQRLIEIVEELKGLTDWKKP*
Ga0075425_1021171502	3300006854	Populus Rhizosphere	MAQLITERVKNLRNEIAKLSEANRDYLKGPKYGTATADHERRLQRLLEIADELKSLTDWKKP*
Ga0075424_1020563631	3300006904	Populus Rhizosphere	MRGRALPMPRLITERIKELRREIANLTEANRKYLVSPKYGSAKADHERRFQRLLEIVEELKSLTDWKKP*
Ga0099793_103279282	3300007258	Vadose Zone Soil	MPQPVAERVKQLRDEIAAINQANRVYLHSPKYGSAVADHERRLQRLLEIVDELKSLTDWKKL*
Ga0099795_103497232	3300007788	Vadose Zone Soil	MSQQRGRSNGKIVVPQLITERIKKLRQEIAELSEKNRKYSLDPKYGSAVADNARRFQRLMEIVEELKSLTDWKKP*
Ga0099829_100975822	3300009038	Vadose Zone Soil	VPRLITERIKKLRQEIAELSEKNRKYSLDPKYGSAVADNARRFQRLMEIVEELKSLTDWKKP*
Ga0099829_103057382	3300009038	Vadose Zone Soil	MPQPVAERIKKLRDEIAAISQANRVHLHGPKYGSSVADHERRMQRLLEIVDEL
Ga0099829_103183473	3300009038	Vadose Zone Soil	MPRLITQRIKELRQEIAEITETNRKYLRGPKYGSAAADNERRFQRLIEIVNELKSLTDWKKP*
Ga0099829_111109721	3300009038	Vadose Zone Soil	MPQPVAERIKKLRDEIAAINQANRVYLHGPKYGSAAADHERRLQRLLEIVDELKSLTDWKKL*
Ga0099830_100843752	3300009088	Vadose Zone Soil	VPRLITERIKKLRQEIAELSEKNRKYSLDPKYGSAIADNARRFQRLMEIVEELKSLTD*
Ga0099830_117701112	3300009088	Vadose Zone Soil	MAQLITERVKNLRNEIAKLSEANRAYLKGPKYGAATADNERRLQRLLENADELKSLTDWKKL*
Ga0099827_103502042	3300009090	Vadose Zone Soil	MPQPVAERIKKLRDEIAAINQANRVYLHSPKYGSAVADHERRLQRLLEIVDELKSLTDWKKL*
Ga0099792_100428471	3300009143	Vadose Zone Soil	MSQQRGRSNGKTVVPQLITERIKKLRQEIAELSEKNRKYSLDAKYGSAVADNARRFQRLMEIVEELKSLTDWKKP*
Ga0099792_108676271	3300009143	Vadose Zone Soil	MGRLITERINELRREIAKLTEENRKYLLGTKYGSATADNERRFQRLIEIVDELKSLTDWKKP*
Ga0105241_110563641	3300009174	Corn Rhizosphere	MPPPITERVKKLRQEIAELTEKNRRYSVGPKYGSAVADNERRFQRLFEIAEE
Ga0105238_125474851	3300009551	Corn Rhizosphere	VPPPITERVKKLRQEIAELTEKSRRYALGPKYGSAAAHNGWRFQRLIEIVEELKSMADWKEP*
Ga0105249_117885472	3300009553	Switchgrass Rhizosphere	MRKRVLPMPRLVTERVKELRREIARMTEENRKYLSGPRYGSASANHERRFQRLLEIVDELRSLTEWKKP*
Ga0105239_126688982	3300010375	Corn Rhizosphere	MPPLITERIKELRREIAEMTEANRKYLRGPKYGSAPADYERRFQRLLEIVDELRSLTEW
Ga0137392_100254926	3300011269	Vadose Zone Soil	MPQPVAERIKKLRDEIAAISQANRVHLHGPKYGSSVADHERRMQRLLEIVDELKSLTDWKKL*
Ga0137392_107329962	3300011269	Vadose Zone Soil	MAQLITERIKELRREIAEISHANRKFFHGPKYGSGVADHERRLERLQEILDELISLTEWKKP*
Ga0137391_100421434	3300011270	Vadose Zone Soil	VPRLITERIEKLRQEIAELSEKNRKYSLDPKYGSAIADNARRFQRLMEIIEELKGLTDWKKP*
Ga0137391_105687311	3300011270	Vadose Zone Soil	MSQQRGRSNGKIVVPQPITERIHKLRQEIAELSEKNRKYSLDPKYGSAVADNARRFQRLMEIVEELKSLTDWKKL*
Ga0137391_110575841	3300011270	Vadose Zone Soil	MAQLITERVKTLRNEIAKLNEANRAYLKGPKYGAAIADNERRLQRLLEIADELKSLTDWKKP*
Ga0137393_101606952	3300011271	Vadose Zone Soil	VPRLITERIKKLRQEIAELSEKNRKYSLDPKYGSAIADNARRFQRLMEIVEELKSLTDWKKP*
Ga0137389_100316544	3300012096	Vadose Zone Soil	MAQLITERVKNLRNEIAKLSEANRAYLKGPKYGAATADNERRLQRLLEIADELKSLTDWKKL*
Ga0137389_102167803	3300012096	Vadose Zone Soil	MARLITKRIKELRCEIAKLTEANRKYLVGPKYGSATADNERRFQRLIEIVDELKSLTDWKKP*
Ga0137389_102280253	3300012096	Vadose Zone Soil	MPQPVAERIKKLRGEIAAISQANRVHLHGPKYGSSVADHERRMQRLLEIVDELKSLTDWK
Ga0137389_103280032	3300012096	Vadose Zone Soil	MPRLITERIKELRREIAKLTEANGKYLVGTKYGSAAADNERRFQRLVEIVDELKSLTDWKRP*
Ga0137389_106576981	3300012096	Vadose Zone Soil	VPQPITERIKKLRQEIAELAEKNRRFSLGPKYGSATADNERRFQRLIEIVEELKSLTDWKKP*
Ga0137389_107125632	3300012096	Vadose Zone Soil	MARPVKERIKDLRDEIAEINQANRAYLRDPKYGSAVADNERRFQRLLEIVEEMKSLTDWKKL*
Ga0137389_112720432	3300012096	Vadose Zone Soil	MQQPISERIKELRREIAEISDANRKFVHRPKYGAAEADQERRLQRLQAILDELVSLTEWKKP*
Ga0137388_100142306	3300012189	Vadose Zone Soil	MAQLITERVKTLRNEIAKLNEANRAYLKGPKYGAAIADNERRLQRLLEIADEFKSLTDWKKP*
Ga0137388_103979511	3300012189	Vadose Zone Soil	MPQPVAERIKKLRDEIAEINQANRAYLRDPKYGSAVADNERRFQRLLEIVEEMKSLTDWKKL*
Ga0137388_108295442	3300012189	Vadose Zone Soil	LRQEIAELSEKNRKYSLDPKYGSAIADNARRFQRLMEIVEELKSLTDWKKP*
Ga0137363_100116495	3300012202	Vadose Zone Soil	VPRLITERIKKLRQEIAELSEKNRKYSLDPKYGSAIADNARRFQRLMEIVEELKSLTDWKKL*
Ga0137363_107383032	3300012202	Vadose Zone Soil	MAQLITERVKNLRNEIAKLSEANWAYLKGPKYGSATADNERRLQRLLEIADELKALTDWKKP*
Ga0137363_107568162	3300012202	Vadose Zone Soil	MSQQRGRSNGKTVVPQLITERIKKLRQEIAELSEKNRKYSLDPKYGSATADNERRFQRLIEIVEELKSLTDWKKP*
Ga0137363_109977192	3300012202	Vadose Zone Soil	MHEPIKERVTKLRKEIAEINKLNRVYLKTAKYGSAEADHERRLQRLLEIVDELNSLTDWKKT*
Ga0137399_114947272	3300012203	Vadose Zone Soil	MSRQRGRSNGKIVVPQLITERIKKLRQEIAELSEKNRKYSLNPKYGSAVADNARRFQRLMEIVEELKSLTDWKKP*
Ga0137362_103280502	3300012205	Vadose Zone Soil	MSQQRGRSNGKTVVPQLITERIKKLRQEIAELSEKNRKYSLDPKYGSAAADNARRFQRLMEIVEELKSLTDWKKQ*
Ga0137378_107084622	3300012210	Vadose Zone Soil	MPQPVAERVKKLRDEIAAINQANRVYLHSPKYGSAVADHERRLQRLLEIVDELKSLTDWKKL*
Ga0137377_112614621	3300012211	Vadose Zone Soil	YMPQPVAERIKKLRDEIAAINQANRVYLHGPKYGSAAADHERRLQRLLEIVDELKSLTDWKKL*
Ga0137387_109226101	3300012349	Vadose Zone Soil	MPQPVAGRIKKLRDEIAAINQANRVYLHSPKYGSAVADHERRLQRLLEIVDELKSLTDWKKL*
Ga0137360_102455733	3300012361	Vadose Zone Soil	YMPQPVAERIKKLRDEIAAINQANLVYLHGPKYGSGVADHERRFQRLLEIVNELKSLTDWKKL*
Ga0137361_100934482	3300012362	Vadose Zone Soil	MPQPVAERIKKLRDEIAAISQANRVYLHSPKYGSAVADHERRMQRLLEIVDELRSLTDWKKL*
Ga0137361_109791192	3300012362	Vadose Zone Soil	PRLITERIKKLRQEIAELSEKNRKYSLDPKYGSAIADNARRFQRLMEIVEELKSLTD*
Ga0137361_112530662	3300012362	Vadose Zone Soil	AYSGAYMPQPVAERIKKLRDEIAAINQANLVYLHGPKYGSGVADHERRFQRLLEIVNELKSLTDWKKL*
Ga0137361_115091152	3300012362	Vadose Zone Soil	MPQPVAERIKKLRDEIAAINQANRVYLHGPKYGSAAADHERRMQRLLEIVDE
Ga0137361_119344171	3300012362	Vadose Zone Soil	MPQPVAERIKKLRDEIAAINQANRVYQHGPKYGSAAADHERRMQRLLEIVDELKSLTDWKKL*
Ga0137390_104335473	3300012363	Vadose Zone Soil	VSRLITDRIKKLRQEIAELSEKNRKYSLDPKYGSAVADNARRFQRLMEIVEELKSLTDWKKL*
Ga0137358_101239561	3300012582	Vadose Zone Soil	MPQPVAERIKKLRDEIAAINQANRVYLHGPKYGSAAADHERRMQRLLEIVDELKSLTDWKKL*
Ga0137358_103677682	3300012582	Vadose Zone Soil	MSQQRGRSNGKTVVPQLITERIKKLRQEIAELSEKNRKYSLDPKYGSATADNERRFQRLIEIVEELKSLTDWKKQ*
Ga0137358_104107751	3300012582	Vadose Zone Soil	QLITERIKKLSQEIAELSEKNRKYSLDPKYGSAVADNARRFQRLMEIVEELKSLTDWKKP
Ga0137398_101171521	3300012683	Vadose Zone Soil	MPRLITERIKALRQEITEITEKNRSYLRGPKYGSAIADNERRFQRLIEIVEELKGLTEWKKP*
Ga0137398_101529462	3300012683	Vadose Zone Soil	MSQQRGRSNGKTVVPQLITERIKKLSQEIAELSEKNRKYSLDPKYGSAVADNARRFQRLMEIVEELKSLTDWKKQ*
Ga0137398_103695071	3300012683	Vadose Zone Soil	PQLITERIKKLSQEIAELSEKNRKYSLDPKYGSAVADNARRFQRLLEIVEELKSLTDWKKP*
Ga0137397_104037881	3300012685	Vadose Zone Soil	VPQPITERIKKLRQEIAELAEKNRRFSLGPKYGSATADNERRLQRLIEIVEELKSLTDWKKP*
Ga0137394_105901292	3300012922	Vadose Zone Soil	MSQQRGRSNGKIVVPQLITERIKKLRQEIAELSEKNRKYSLDPKYGSAVADNARRFQRLIEIVEELKSLTDWKKP*
Ga0137394_110452252	3300012922	Vadose Zone Soil	MAQLITDRVKNLRNEIAKLREANRAYLKGPKYGTATADNERRLQRLLEIADELKSLTDWKKP*
Ga0137359_101662843	3300012923	Vadose Zone Soil	MARLITKRIKELRCEIAKLTEANRKYLVGPKYGSATADNERRFQRLIEIVDELKSLT
Ga0137359_111060211	3300012923	Vadose Zone Soil	MPQAVAERIKKLRDEIAAINQANRVYLHGPKYGSAAADHERRMQRLLEIVDELKSLTDWKKL*
Ga0137359_112657251	3300012923	Vadose Zone Soil	MPQPVAERIKKLRDEIAAINQANRVYLHGPKYGSAAADHERRLQRLLEIVD
Ga0137413_106076261	3300012924	Vadose Zone Soil	MPRLITERIKALRQEITEITEKNRSYLRGPKYGAAIADNERRFQRLIEIVEELKGLTEWKKP*
Ga0137419_101265223	3300012925	Vadose Zone Soil	MSQQRGRSNGKIVVPQLITERIKKLRQEIAELSEKNRKYSLDPKYGSATADNERRFQRLIEIVEELKSLTDWKKP*
Ga0137416_111619351	3300012927	Vadose Zone Soil	VSRLITDRIKKLRQEIAELSEKNRKYSLDPKYGSAVADNARRFQRLMEIVEELKSLTDWKKP*
Ga0137416_120468581	3300012927	Vadose Zone Soil	MQEPIKERVTKLRKEIAEINKLNRVYLKTAKYGSAEADHERRLQRLLEIVDELNSLTDWKKT*
Ga0137404_101808112	3300012929	Vadose Zone Soil	MSQQRGRSNGKTVVPQLITERIKKLRQEIAELSEKNRKYSLDPKYGSAVADNARRFQRLMEIVEELKSLTDWKKP*
Ga0137404_114071651	3300012929	Vadose Zone Soil	MAQLITERVKTLRNEIAKLSEANRSYLKGPKYGTAAADNERRFQRLLEIADELKSLTDWKKP*
Ga0137404_117592031	3300012929	Vadose Zone Soil	KTVVPQLITERIKKLRQEIAELSEKNRKYSLDPKYGSATADNERRFQRLIEIVEELKSLTDWKKP*
Ga0137404_119070262	3300012929	Vadose Zone Soil	RSIQWCYMPQPEAERIKKLRDEIAAINQANRVYLHGPKSGSAVADHERRMQRLLEIVDELKSLTDWKKL*
Ga0137407_102003623	3300012930	Vadose Zone Soil	MPQPVAERIKKLRDEIAAINQANRVYLHGPKYGSAVADHERRMQRLLEIVDELKSLTDWKKL*
Ga0137407_105477432	3300012930	Vadose Zone Soil	VLQKIIVVPRPITERIEKLRQEIAELTEKNRIYSLGPKYGSAVADNERRFQRLIEIVEELKSMTDWKKP*
Ga0137407_116471642	3300012930	Vadose Zone Soil	LRQEIAELSEKNRKYSLDPRYGSAVADNARRFQRLMEIVEELKSLTDWKKP*
Ga0164303_102351701	3300012957	Soil	MAQLITERVKNLRNEIAKLSEANRTYLTGPKYGAATADNERRLQRLLEIADELKSLTDWKKP*
Ga0164299_109550631	3300012958	Soil	VYLRMAQLITERVKNLRNEIAKLSEANRTYLTGPKYGAATADNERRLQRLLEIADELKSLTDWKKP*
Ga0164309_117896571	3300012984	Soil	MAQLITERVKNLRNEIAKLSEANRTYLTGPKYGAATADNERRLQRLLEIADELKSPTEWKKA*
Ga0164304_106504883	3300012986	Soil	MAPLVTERIKQLRQEIAEISEANRKFARGPKYGTAVADHERRLERLQAILDELVSLTDWKKP*
Ga0157374_100401044	3300013296	Miscanthus Rhizosphere	VPPPITERVKKLRQEIAELTEKNRRYSVGPKYGSAVADNERRFQRLFEIAEELKSLTDWKKP*
Ga0157378_130608661	3300013297	Miscanthus Rhizosphere	VLRKIIVVPPPITERVKKLRQEIAELTEKNRRYSVGPKYGSGVADNERRFQRLFEIAEELKSLTDWKKP*
Ga0163162_102469401	3300013306	Switchgrass Rhizosphere	VKKLREEIAELTGKNRAYSCGPKYGSAVADNERRFQRLIEIADELKSLTDWKKP*
Ga0167668_10761332	3300015193	Glacier Forefield Soil	MPQPVAERVKKLRHEIAEINQANRAYLRDPRYGSAVADNERRLQRLLEIVEEMKSLTDWKKL*
Ga0137418_101762111	3300015241	Vadose Zone Soil	MPRLITERIKALRQEITEITEKNRSYLRGPKYGAAIADNERRFQRLIEIVEELKGLTDWKKP*
Ga0137412_107919272	3300015242	Vadose Zone Soil	MSQQRERSNGKTVVPQLITERIKKLRQEIAELSEKNRKYSLDPKYGSATADNERRFQRLIEIVEELKSLTDWKKP*
Ga0137409_100708807	3300015245	Vadose Zone Soil	MARLITKRIKELRCEIAKLTEANRKYLVGPKYGSATADNERRFQRLIEIVEELKSLTDWKKP*
Ga0137409_101362191	3300015245	Vadose Zone Soil	MFRYNAVGTLIIIPRLITERIKALRQEITEITEKNRSYLRGPKYGAAIADNERRFQRLIEIVEELKGLTDWKKP*
Ga0137403_103349662	3300015264	Vadose Zone Soil	MAQLITERVKNLRNEIAKLSEANRAYLKGPKYGVATADNERRLQRLLEIADELRSLTDWKKP*
Ga0137403_107762431	3300015264	Vadose Zone Soil	MPRLITERIKALRQEITEITEKNRSYLRGPKYGAAIADNERRFQRLIEIVEELKGLTDWKSHETATYCLTV*
Ga0137403_111252631	3300015264	Vadose Zone Soil	MAQLITERVKNLRNEIAKLSEANRAYLEGPKYGTATADNERRLQRLLEIADELKSLSDWKKP*
Ga0187821_100211822	3300017936	Freshwater Sediment	MQEPIEERVKRLREEMAKLNKLNGVYLRAAKYGSAKADHERRLQRLLEIVDELNSLTDWKTT
Ga0137408_13223891	3300019789	Vadose Zone Soil	MPQPVTERIKKLRDEIAAINQANRVYLHSPKYGSAVADHERRLQRLLEIVDELKSLTDWKKI
Ga0193722_10859481	3300019877	Soil	MAQLITERIKTLRNEIAKLSEANRAYLKGPKYGAATADNERRLQRLLEIADELRSLTDWKKP
Ga0193723_11485341	3300019879	Soil	MAQLITERVKNLRNEIAKLSEANRAYLKGPKYGVATADNERRLQRLLEIADELKSLTDWKKP
Ga0193729_10454002	3300019887	Soil	MQEPIKKRVKRLREEIAELNKLNRAYLKTPKYGSAEADHERRLQRLLEIVDELNSLTDWKKT
Ga0193755_11236912	3300020004	Soil	VPQPITERIKKLRQEIAELTEKNRKYSLGPKYGSAVADNERRFQRLIEIVEELKSLTDWKKP
Ga0193755_11886161	3300020004	Soil	MAQLITERVKNLRNEIAKLSEANRAYLKGPKYGTAAADNERRLQRLLEIADELKSLTDWKKP
Ga0210403_112206532	3300020580	Soil	MQEPIQERVKRLREEIAKLNKLNGVYLRAAKYGSAKADHERRLQRLLEIVDELNSLTDWKKT
Ga0210401_101601286	3300020583	Soil	VPRPITERIKKLRQEIAELSEKNRKYSLDPKYGSAVADNARRFQRLMEIIEELKSLTDWKKP
Ga0210382_101647911	3300021080	Groundwater Sediment	ERIQGLRQEIAEITETNRKYLLGPKRGSAPADNERRFQRLLEIADELKSLTDWKKP
Ga0179596_103239091	3300021086	Vadose Zone Soil	LRDEIAAINQANRVYLHSPKYGSAVADHERRLQRLLEIVDELKSLTDWKKL
Ga0193719_100825821	3300021344	Soil	AQLIAERVKNLRNEIAKLSEANRAYLKGPKYGVATADNERRLQRLLEIADELKSLTDWKK
Ga0210409_101342813	3300021559	Soil	MPQPVAERVKKLRDEIAEISQANHAYAHDPKYGSAVAAHERRFQRLLEIVDELKSLTDWKKL
Ga0137417_14995462	3300024330	Vadose Zone Soil	MPQPVTERIKKLRDEIAAINQANRVYLHSPKYGSAVADHERRLQRLLEIVDELKSLTDWKKL
Ga0207710_100466241	3300025900	Switchgrass Rhizosphere	GRPITERIKELRQEIAELTEKNRRYSLGPKYGSAAADNERRFQRLIEIVEELKSMTDWKE
Ga0207687_100406858	3300025927	Miscanthus Rhizosphere	MPPPITERVKKLREEIAELTGKNRAYSCGPKYGSAVADNERRFQRLIEIADELKSLTDWKKP
Ga0207668_119653251	3300025972	Switchgrass Rhizosphere	MPRLVTERVKELRREIARMTEENRKYLSGPRYGSASANHERRFQRALEIVDELRSLTEWKKP
Ga0209839_101078722	3300026294	Soil	RSVAERIKTLRHEIAKINEANLTYVNSPKIGSATADNERRFQRLLEIVDELKSLTDWKKI
Ga0257180_10491661	3300026354	Soil	MPQPVAERIKKLRDEIAAINQANRVYLHSPKYGSAVADHERRLQRLLEIVDELKSLTDWKKL
Ga0209577_105055962	3300026552	Soil	VQRPVAERIKALRQEIAEITEKNLQYSRDPKYGSSTAENERRFQRLIEILDELKSLTEWKAL
Ga0209217_10066742	3300027651	Forest Soil	MPQPVAERVKKLRDEIAEINQANRAYVHDPKYGSAVADHERRFQRLLEIVNELKSLTDWKKL
Ga0209180_101197722	3300027846	Vadose Zone Soil	VPRLITERIKKLRQEIAELSEKNRKYSLDPKYGSAVADNARRFQRLMEIVEELKSLTDWKKP
Ga0209180_101600322	3300027846	Vadose Zone Soil	MPQPVAERIKKLRDEIAAINQANRVYLHSPKYGSAVADHERRLQRLLEIVDELKS
Ga0209701_100152177	3300027862	Vadose Zone Soil	MPQPVAERIKKLRDEIAAISQANRVYLHSPKYGSAVADHERRMQRLLEIVDELRSLTDWKKL
Ga0209701_103841072	3300027862	Vadose Zone Soil	VPRLITERIKKLRQEIAELSEKNRKYSLDPKYGSAVADNARRFQRLMEIVEELKSLTDWKKL
Ga0209488_101091352	3300027903	Vadose Zone Soil	MSQQRGRSNGKAVVPQLITERIKKLRQEIAELSEKNRKYSLDAKYGSAVADNARRFQRLMEIVEELKSLTDWKKQ
Ga0209488_102120751	3300027903	Vadose Zone Soil	MPQPVAERIKKLRDEIAAISQANRVYLHSPKYGSAVADHERRMQRLLEIVDEL
Ga0209526_107039781	3300028047	Forest Soil	MPQPVAERIKKLRDEIAEINQANRAYLCDPKYGSAVAGNERRLQRLLEIVEEMKSLTDWKKL
Ga0137415_100325972	3300028536	Vadose Zone Soil	MPQPVAERIKKLRDEIAAINQANRVYLHGPKYGSAAADHERRMQRLLEIVDELKSLTDWKKL
Ga0137415_107956773	3300028536	Vadose Zone Soil	VPQPITERIKKLRQEIAELAEKNRRFSLGPKYGSATADNERRFQRLIEIVEELKSLTDWKKP
Ga0137415_108780921	3300028536	Vadose Zone Soil	MQEPIKERVTKLRKEIAEINKLNRVYLKTAKYGSAEADHERRLQRLLEIVDELNSLTDWKKT
Ga0307504_104642681	3300028792	Soil	QPVAERVKKLRDEIAEINQANRAYVHDPKYGSAEATHERRFQRLLEIVDELKSLTDWKKL
Ga0307312_105063392	3300028828	Soil	MPRLITERIQGLRKEIAEITETNRKYLLGPKRGSAPADNERRFQRLLEIADELKSLTDWKKP
Ga0170834_1038400892	3300031057	Forest Soil	PPPITERVKKLRQEIAELTEKNRRYSLAPKYGSAVADNERRFQRLIEIVEELKSLTDWKK
Ga0310813_105615322	3300031716	Soil	MPPLITERIKELRREIAEMTEANRKYLRGPKYGSAPADYERRFQRLLEIVDELRSLTEWKKP
Ga0307469_102728673	3300031720	Hardwood Forest Soil	VLRKIIVVPPPITERVKKLRQEIAELTEKNRRYSVGPKYGSAVPDNERRFQRLLEIAEELKSLTDWKKP
Ga0307469_103250173	3300031720	Hardwood Forest Soil	MLGGLLPMPRLITERIKELRREISILTEANRKYLVGNKYGSAAADNERRFQRLMEIVDELKSLTDWKKA
Ga0307479_103900152	3300031962	Hardwood Forest Soil	VPPPITERVKKLRQEIAELTEKNRKYVLGPKYGSATADNERRFQRLIEIVDELKSLTDWKKP
Ga0307479_104951882	3300031962	Hardwood Forest Soil	VPQLITERIKKLRQEIAELTEKNRRYSLGPKYGSATADNERRFQRLMEIVEELKSLTDWKKL
Ga0307479_105458272	3300031962	Hardwood Forest Soil	MLRPVAERVKELRDEIAEINQANRAYVHDPKYGSAEATHERRFQRLLEIVDELKSLTDWKKL
Ga0307471_1014943822	3300032180	Hardwood Forest Soil	MAQLITERIKKLRDEIAKLNEANQAYLNGPKYGPAVADNERRFQRLLEIADELKSLTEWKKP
Ga0307471_1024901921	3300032180	Hardwood Forest Soil	MAQLITERVKNLRNEIAKLSEANRAYLKGPKYGAATADNERRLQRLLEIADELKSLTDWKSHKTDR
Ga0307472_1001252984	3300032205	Hardwood Forest Soil	MAQLITERIKKLRDEIAKLNEANQAYLNGLKYGPAVADNERRFQRLLEIADELKSLTEWKKP
Ga0307472_1023957841	3300032205	Hardwood Forest Soil	IQERIKRLREEIRTIKEANQVYMVSPKHGSASSDHERRLQRLLEIVTELNSLTDWKKP
Ga0310812_104067131	3300032421	Soil	MPRLITERIKELRREIAEMTEANRKYLRGPKYGSAPADYERRFQRLLEIVDELRSLTEWRKP
Ga0310812_104124663	3300032421	Soil	MPRLITERIKELRQEIAEMTEANRKYLSGPRYGPRYGSASADHERRFQRLLEIVDELRSLTEWKKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F043956

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences